Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270100012257/qd0032sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270100012257/qd0032Isup2.hkl |
CCDC reference: 152680
Oxidation of (E,E)-methyl farnesoate by potassium permanganate afforded a mixture of epimeric lactols in a ratio of 6:1. Crystallization from an ether–hexane mixture afforded X-ray quality crystals of the racemate (m.p. 353–356 K), confirming the proposed stereochemical outcome of the oxidative cyclization reaction. We cannot tell if (I) is the major epimer as the two epimers may interconvert via the ring-open form in solution. Crystallization from an ether–hexane mixture afforded X-ray quality crystals of the racemate, confirming the proposed stereochemical outcome of the oxidative cyclization reaction (Brown et al., 2000).
The completeness for θmax = 25.03° was 93.6%, which was slightly lower than the requirement (>95%). The H-atom positions were located from the difference map and fully refined. The bond-length ranges were 0.94 (3)–1.04 (3) Å for C—H and 0.87 (3)–0.88 (2) Å for O—H.
Data collection: DENZO (Otwinowski & Minor, 1997) and COLLECT (Hooft, 1998); cell refinement: DENZO and COLLECT; data reduction: DENZO, COLLECT (Hooft, 1998) and maXus (Mackay et al., 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); software used to prepare material for publication: WinGX (Farrugia, 1998).
C16H28O7 | F(000) = 720 |
Mr = 332.38 | Dx = 1.264 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 7.5615 (2) Å | Cell parameters from 11814 reflections |
b = 11.1023 (4) Å | θ = 3.2–25.0° |
c = 20.9017 (5) Å | µ = 0.10 mm−1 |
β = 95.302 (2)° | T = 150 K |
V = 1747.19 (9) Å3 | Block, colourless |
Z = 4 | 0.4 × 0.4 × 0.3 mm |
Nonius Kappa CCD area detector diffractometer | 2392 reflections with I > 2σ(I) |
Radiation source: Nonius FR591 rotating anode | Rint = 0.026 |
Φ and ω scans to fill Ewald sphere | θmax = 25.0°, θmin = 3.0° |
Absorption correction: empirical (using intensity measurements) (SORTAV; Blessing, 1997) | h = −9→8 |
Tmin = 0.962, Tmax = 0.971 | k = −13→13 |
5490 measured reflections | l = −23→24 |
2876 independent reflections |
Refinement on F2 | All H-atom parameters refined |
Least-squares matrix: full | w = 1/[σ2(Fo2) + (0.0459P)2 + 0.5111P] where P = (Fo2 + 2Fc2)/3 |
R[F2 > 2σ(F2)] = 0.038 | (Δ/σ)max = 0.002 |
wR(F2) = 0.100 | Δρmax = 0.22 e Å−3 |
S = 1.04 | Δρmin = −0.21 e Å−3 |
2876 reflections | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
321 parameters | Extinction coefficient: 0.016 (3) |
0 restraints |
C16H28O7 | V = 1747.19 (9) Å3 |
Mr = 332.38 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 7.5615 (2) Å | µ = 0.10 mm−1 |
b = 11.1023 (4) Å | T = 150 K |
c = 20.9017 (5) Å | 0.4 × 0.4 × 0.3 mm |
β = 95.302 (2)° |
Nonius Kappa CCD area detector diffractometer | 2876 independent reflections |
Absorption correction: empirical (using intensity measurements) (SORTAV; Blessing, 1997) | 2392 reflections with I > 2σ(I) |
Tmin = 0.962, Tmax = 0.971 | Rint = 0.026 |
5490 measured reflections |
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.100 | All H-atom parameters refined |
S = 1.04 | Δρmax = 0.22 e Å−3 |
2876 reflections | Δρmin = −0.21 e Å−3 |
321 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
C1 | −0.1978 (2) | 1.1799 (2) | 0.06154 (9) | 0.0327 (4) | |
C2 | 0.09649 (19) | 1.11322 (15) | 0.05546 (7) | 0.0230 (4) | |
C3 | 0.25453 (19) | 1.05047 (15) | 0.09094 (7) | 0.0220 (4) | |
C4 | 0.33612 (18) | 1.12402 (14) | 0.14986 (7) | 0.0215 (4) | |
C5 | 0.3581 (2) | 1.25525 (16) | 0.13215 (9) | 0.0300 (4) | |
C6 | 0.2377 (2) | 1.10448 (15) | 0.20985 (7) | 0.0238 (4) | |
C7 | 0.3249 (2) | 0.99189 (16) | 0.23995 (7) | 0.0246 (4) | |
C8 | 0.51785 (19) | 1.00672 (14) | 0.22536 (7) | 0.0216 (4) | |
C9 | 0.62172 (19) | 0.89076 (14) | 0.21957 (7) | 0.0203 (4) | |
C10 | 0.6403 (2) | 0.82591 (16) | 0.28399 (8) | 0.0247 (4) | |
C11 | 0.8022 (2) | 0.90886 (15) | 0.19298 (8) | 0.0253 (4) | |
C12 | 0.8227 (2) | 0.79475 (16) | 0.15384 (8) | 0.0283 (4) | |
C13 | 0.6329 (2) | 0.77072 (15) | 0.12543 (7) | 0.0260 (4) | |
C14 | 0.5803 (2) | 0.63832 (17) | 0.11301 (8) | 0.0328 (4) | |
C15 | 0.3874 (3) | 0.6287 (2) | 0.08487 (11) | 0.0465 (5) | |
C16 | 0.7058 (4) | 0.5775 (2) | 0.07054 (11) | 0.0526 (6) | |
O1 | −0.04044 (13) | 1.11962 (11) | 0.09095 (5) | 0.0269 (3) | |
O2 | 0.09376 (14) | 1.15358 (13) | 0.00188 (5) | 0.0354 (3) | |
O3 | 0.37779 (15) | 1.03625 (12) | 0.04555 (5) | 0.0308 (3) | |
O4 | 0.51060 (13) | 1.07433 (10) | 0.16670 (5) | 0.0241 (3) | |
O5 | 0.52321 (13) | 0.81350 (9) | 0.17252 (5) | 0.0212 (3) | |
O6 | 0.58844 (16) | 0.83906 (12) | 0.06898 (5) | 0.0332 (3) | |
O7 | 0.60026 (17) | 0.57556 (12) | 0.17325 (6) | 0.0341 (3) | |
H1A | −0.283 (3) | 1.176 (2) | 0.0941 (11) | 0.051 (6)* | |
H1B | −0.165 (3) | 1.263 (3) | 0.0505 (11) | 0.057 (7)* | |
H1C | −0.239 (2) | 1.1406 (19) | 0.0226 (10) | 0.035 (5)* | |
H3 | 0.214 (2) | 0.9713 (17) | 0.1056 (8) | 0.020 (4)* | |
H03 | 0.452 (3) | 0.978 (2) | 0.0590 (11) | 0.051 (6)* | |
H5A | 0.429 (3) | 1.2987 (19) | 0.1652 (10) | 0.039 (5)* | |
H5B | 0.416 (2) | 1.2615 (19) | 0.0918 (9) | 0.036 (5)* | |
H5C | 0.242 (2) | 1.2966 (18) | 0.1249 (8) | 0.031 (5)* | |
H06 | 0.675 (3) | 0.845 (3) | 0.0445 (13) | 0.072 (8)* | |
H6A | 0.257 (2) | 1.1747 (19) | 0.2377 (9) | 0.035 (5)* | |
H6B | 0.107 (2) | 1.0966 (17) | 0.1985 (8) | 0.029 (4)* | |
H07 | 0.546 (3) | 0.619 (3) | 0.2007 (13) | 0.075 (9)* | |
H7A | 0.314 (2) | 0.9827 (18) | 0.2867 (10) | 0.035 (5)* | |
H7B | 0.271 (2) | 0.9178 (17) | 0.2186 (8) | 0.022 (4)* | |
H8 | 0.582 (2) | 1.0556 (16) | 0.2591 (8) | 0.023 (4)* | |
H10A | 0.521 (3) | 0.8057 (18) | 0.2971 (9) | 0.033 (5)* | |
H10B | 0.702 (2) | 0.8791 (18) | 0.3163 (9) | 0.033 (5)* | |
H10C | 0.706 (2) | 0.753 (2) | 0.2808 (8) | 0.031 (5)* | |
H11A | 0.898 (2) | 0.9192 (17) | 0.2288 (9) | 0.029 (5)* | |
H11B | 0.802 (2) | 0.9805 (17) | 0.1662 (8) | 0.025 (4)* | |
H12A | 0.907 (3) | 0.8041 (19) | 0.1198 (10) | 0.045 (6)* | |
H12B | 0.860 (2) | 0.7246 (19) | 0.1809 (9) | 0.034 (5)* | |
H15A | 0.305 (3) | 0.671 (2) | 0.1134 (12) | 0.062 (7)* | |
H15B | 0.381 (3) | 0.666 (2) | 0.0440 (13) | 0.066 (7)* | |
H15C | 0.358 (3) | 0.544 (2) | 0.0811 (10) | 0.052 (6)* | |
H16A | 0.833 (4) | 0.576 (3) | 0.0943 (13) | 0.076 (8)* | |
H16B | 0.700 (3) | 0.620 (2) | 0.0297 (13) | 0.066 (7)* | |
H16C | 0.670 (3) | 0.497 (3) | 0.0640 (12) | 0.066 (7)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0186 (8) | 0.0517 (13) | 0.0273 (9) | 0.0074 (8) | −0.0011 (7) | 0.0007 (8) |
C2 | 0.0219 (8) | 0.0278 (9) | 0.0199 (8) | −0.0004 (6) | 0.0049 (6) | −0.0009 (6) |
C3 | 0.0221 (8) | 0.0260 (9) | 0.0187 (8) | 0.0037 (6) | 0.0067 (6) | 0.0028 (6) |
C4 | 0.0147 (7) | 0.0242 (9) | 0.0256 (8) | 0.0034 (6) | 0.0023 (6) | 0.0028 (6) |
C5 | 0.0230 (9) | 0.0251 (9) | 0.0416 (11) | 0.0028 (7) | 0.0011 (7) | 0.0046 (8) |
C6 | 0.0221 (8) | 0.0277 (9) | 0.0217 (8) | 0.0038 (7) | 0.0029 (6) | −0.0025 (7) |
C7 | 0.0233 (8) | 0.0321 (10) | 0.0189 (8) | 0.0017 (7) | 0.0054 (6) | 0.0012 (7) |
C8 | 0.0238 (8) | 0.0226 (9) | 0.0176 (7) | −0.0012 (6) | −0.0019 (6) | 0.0000 (6) |
C9 | 0.0195 (7) | 0.0219 (9) | 0.0189 (8) | −0.0023 (6) | −0.0015 (5) | 0.0002 (6) |
C10 | 0.0254 (9) | 0.0245 (9) | 0.0236 (8) | −0.0016 (7) | −0.0010 (6) | 0.0030 (7) |
C11 | 0.0195 (8) | 0.0266 (9) | 0.0297 (9) | −0.0003 (7) | 0.0020 (6) | 0.0069 (7) |
C12 | 0.0253 (8) | 0.0316 (10) | 0.0286 (9) | 0.0075 (7) | 0.0067 (7) | 0.0067 (7) |
C13 | 0.0314 (9) | 0.0282 (9) | 0.0190 (8) | 0.0092 (7) | 0.0048 (6) | 0.0029 (6) |
C14 | 0.0485 (10) | 0.0285 (10) | 0.0202 (8) | 0.0084 (8) | −0.0026 (7) | −0.0008 (7) |
C15 | 0.0622 (14) | 0.0306 (11) | 0.0420 (12) | −0.0005 (10) | −0.0209 (10) | −0.0035 (9) |
C16 | 0.0878 (18) | 0.0364 (13) | 0.0347 (12) | 0.0210 (12) | 0.0121 (11) | −0.0054 (9) |
O1 | 0.0170 (5) | 0.0413 (7) | 0.0228 (6) | 0.0040 (5) | 0.0032 (4) | 0.0042 (5) |
O2 | 0.0281 (6) | 0.0553 (9) | 0.0235 (6) | 0.0124 (6) | 0.0064 (4) | 0.0117 (6) |
O3 | 0.0296 (6) | 0.0431 (8) | 0.0211 (6) | 0.0167 (6) | 0.0095 (4) | 0.0068 (5) |
O4 | 0.0163 (5) | 0.0279 (6) | 0.0285 (6) | 0.0033 (4) | 0.0031 (4) | 0.0094 (5) |
O5 | 0.0216 (5) | 0.0229 (6) | 0.0194 (6) | −0.0002 (4) | 0.0024 (4) | −0.0038 (4) |
O6 | 0.0369 (7) | 0.0386 (7) | 0.0251 (6) | 0.0139 (6) | 0.0090 (5) | 0.0127 (5) |
O7 | 0.0471 (8) | 0.0264 (7) | 0.0277 (7) | 0.0048 (6) | −0.0034 (5) | 0.0047 (5) |
C1—O1 | 1.4512 (19) | C8—C9 | 1.519 (2) |
C2—O2 | 1.2047 (19) | C9—O5 | 1.4570 (17) |
C2—O1 | 1.3301 (18) | C9—C10 | 1.522 (2) |
C2—C3 | 1.516 (2) | C9—C11 | 1.534 (2) |
C3—O3 | 1.3990 (18) | C11—C12 | 1.524 (2) |
C3—C4 | 1.557 (2) | C12—C13 | 1.525 (2) |
C4—O4 | 1.4433 (17) | C13—O6 | 1.4170 (19) |
C4—C5 | 1.516 (2) | C13—O5 | 1.4258 (18) |
C4—C6 | 1.532 (2) | C13—C14 | 1.539 (2) |
C6—C7 | 1.522 (2) | C14—O7 | 1.435 (2) |
C7—C8 | 1.527 (2) | C14—C16 | 1.516 (3) |
C8—O4 | 1.4344 (18) | C14—C15 | 1.525 (3) |
O2—C2—O1 | 123.45 (14) | O5—C9—C11 | 104.42 (12) |
O2—C2—C3 | 124.79 (13) | C8—C9—C11 | 113.70 (13) |
O1—C2—C3 | 111.76 (12) | C10—C9—C11 | 111.73 (12) |
O3—C3—C2 | 105.33 (12) | C12—C11—C9 | 102.93 (13) |
O3—C3—C4 | 110.83 (12) | C11—C12—C13 | 102.46 (13) |
C2—C3—C4 | 112.50 (13) | O6—C13—O5 | 106.74 (12) |
O4—C4—C5 | 107.97 (12) | O6—C13—C12 | 111.89 (14) |
O4—C4—C6 | 104.40 (11) | O5—C13—C12 | 105.05 (12) |
C5—C4—C6 | 114.12 (13) | O6—C13—C14 | 109.47 (13) |
O4—C4—C3 | 106.19 (12) | O5—C13—C14 | 106.08 (13) |
C5—C4—C3 | 110.81 (13) | C12—C13—C14 | 116.88 (13) |
C6—C4—C3 | 112.72 (12) | O7—C14—C16 | 106.07 (15) |
C7—C6—C4 | 103.29 (12) | O7—C14—C15 | 108.88 (16) |
C6—C7—C8 | 102.38 (13) | C16—C14—C15 | 111.79 (18) |
O4—C8—C9 | 110.77 (12) | O7—C14—C13 | 108.13 (13) |
O4—C8—C7 | 105.39 (11) | C16—C14—C13 | 110.97 (17) |
C9—C8—C7 | 115.81 (13) | C15—C14—C13 | 110.80 (15) |
O5—C9—C8 | 108.48 (11) | C2—O1—C1 | 116.01 (12) |
O5—C9—C10 | 108.56 (12) | C8—O4—C4 | 111.73 (10) |
C8—C9—C10 | 109.67 (13) | C13—O5—C9 | 111.61 (11) |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H03···O6 | 0.88 (2) | 1.86 (3) | 2.7250 (16) | 166 (2) |
O6—H06···O2i | 0.87 (3) | 2.08 (3) | 2.9381 (16) | 171 (2) |
O6—H06···O3i | 0.87 (3) | 2.30 (3) | 2.7973 (16) | 116 (2) |
O7—H07···O5 | 0.88 (3) | 2.24 (3) | 2.7048 (17) | 113 (2) |
Symmetry code: (i) −x+1, −y+2, −z. |
Experimental details
Crystal data | |
Chemical formula | C16H28O7 |
Mr | 332.38 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 150 |
a, b, c (Å) | 7.5615 (2), 11.1023 (4), 20.9017 (5) |
β (°) | 95.302 (2) |
V (Å3) | 1747.19 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.4 × 0.4 × 0.3 |
Data collection | |
Diffractometer | Nonius Kappa CCD area detector diffractometer |
Absorption correction | Empirical (using intensity measurements) (SORTAV; Blessing, 1997) |
Tmin, Tmax | 0.962, 0.971 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5490, 2876, 2392 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.100, 1.04 |
No. of reflections | 2876 |
No. of parameters | 321 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.22, −0.21 |
Computer programs: DENZO (Otwinowski & Minor, 1997) and COLLECT (Hooft, 1998), DENZO and COLLECT, DENZO, COLLECT (Hooft, 1998) and maXus (Mackay et al., 1998), SHELXS97 (Sheldrick, 1990), SHELXL97 (Sheldrick, 1997), WinGX (Farrugia, 1998).
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H03···O6 | 0.88 (2) | 1.86 (3) | 2.7250 (16) | 166 (2) |
O6—H06···O2i | 0.87 (3) | 2.08 (3) | 2.9381 (16) | 171 (2) |
O6—H06···O3i | 0.87 (3) | 2.30 (3) | 2.7973 (16) | 116 (2) |
O7—H07···O5 | 0.88 (3) | 2.24 (3) | 2.7048 (17) | 113 (2) |
Symmetry code: (i) −x+1, −y+2, −z. |
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The title molecule, (I), is involved in both intra- and intermolecular hydrogen bonding. The intramolecular hydrogen bonds are O3—H03···O6 and O7—H07···O5. Both have donor–acceptor distances of less than 2.73 Å, but the O3–H03···O6 angle of 166 (2)° suggests it is the stronger of the two.
The intermolecular hydrogen bonds are bifurcated at H06, i.e. O6—H06···O2 and O6–H06···O3. These link pairs of molecules to from dimers situated around the crystallographic centres of inversion, and the action of these centres on the chiral molecule means they are enantiomerically related.