Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270100011914/qd0021sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270100011914/qd0021Isup2.hkl |
CCDC reference: 152670
Enantiomerically pure (S)-2-(fluorodiphenylmethyl)pyrrolidine, (II), was prepared (from the corresponding oxazolidinone) and characterized spectroscopically by O'Hagan et al. (2000). Optical rotation was measured on an Optical Activity Ltd AA-10 automatic polarimeter, [α]D25 = −0.81° cm2 g−1 (MeOH, c 7.4). Salt (I) formed readily as a white precipitate on bubbling gaseous HCl through the solution of (II) in diethyl ether (Tavasli, 1999). Crystals of X-ray quality were obtained by recrystallization from 2-propanol.
2337 symmetrically independent reflections and 1670 Friedel equivalents were measured [respectively, 2252 and 1592 with I>2σ(I)]. All H atoms were refined in isotropic approximation; bond distances Csp2—H 0.93 (2)–1.01 (2) Å and Csp3—H 0.94 (2)–0.98 (2) Å.
Data collection: SMART (Bruker, 1999); cell refinement: SMART; data reduction: SAINT (Bruker, 1999); program(s) used to solve structure: SHELXTL (Bruker, 1997); program(s) used to refine structure: SHELXTL; software used to prepare material for publication: SHELXTL.
C17H19FN+·Cl− | Dx = 1.282 Mg m−3 |
Mr = 291.78 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, P212121 | Cell parameters from 840 reflections |
a = 7.415 (3) Å | θ = 12.0–26.4° |
b = 8.353 (4) Å | µ = 0.25 mm−1 |
c = 24.406 (10) Å | T = 120 K |
V = 1511.6 (11) Å3 | Plate, colourless |
Z = 4 | 0.58 × 0.45 × 0.14 mm |
F(000) = 616 |
SMART 1K CCD area-detector diffractometer | 4007 independent reflections |
Radiation source: fine-focus sealed tube | 3844 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.020 |
Detector resolution: 8 pixels mm-1 | θmax = 29.1°, θmin = 1.7° |
ω scans | h = −9→10 |
Absorption correction: multi-scan (SADABS; Sheldrick, 1998); Rint = 0.030 before correction | k = −11→10 |
Tmin = 0.847, Tmax = 0.962 | l = −33→33 |
14327 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.027 | All H-atom parameters refined |
wR(F2) = 0.067 | Calculated w = 1/[σ2(Fo2) + (0.0417P)2 + 0.1226P] where P = (Fo2 + 2Fc2)/3 |
S = 1.08 | (Δ/σ)max = 0.003 |
4007 reflections | Δρmax = 0.29 e Å−3 |
257 parameters | Δρmin = −0.19 e Å−3 |
0 restraints | Absolute structure: Flack (1983) |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.01 (4) |
C17H19FN+·Cl− | V = 1511.6 (11) Å3 |
Mr = 291.78 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 7.415 (3) Å | µ = 0.25 mm−1 |
b = 8.353 (4) Å | T = 120 K |
c = 24.406 (10) Å | 0.58 × 0.45 × 0.14 mm |
SMART 1K CCD area-detector diffractometer | 4007 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1998); Rint = 0.030 before correction | 3844 reflections with I > 2σ(I) |
Tmin = 0.847, Tmax = 0.962 | Rint = 0.020 |
14327 measured reflections |
R[F2 > 2σ(F2)] = 0.027 | All H-atom parameters refined |
wR(F2) = 0.067 | Δρmax = 0.29 e Å−3 |
S = 1.08 | Δρmin = −0.19 e Å−3 |
4007 reflections | Absolute structure: Flack (1983) |
257 parameters | Absolute structure parameter: −0.01 (4) |
0 restraints |
Experimental. The data collection nominally covered over a hemisphere of reciprocal space, by a combination of four sets of ω scans; each set at different ϕ and/or 2θ angles and each scan (15 sec exposure) covering 0.3° in ω. Crystal decay was monitored by repeating 50 initial frames at the end of data collection and comparing duplicate reflections. Crystal to detector distance 4.51 cm. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. |
x | y | z | Uiso*/Ueq | ||
Cl | 0.27784 (4) | 0.92920 (3) | 0.517928 (12) | 0.02246 (7) | |
F | 0.09308 (9) | 0.41100 (9) | 0.38753 (3) | 0.02327 (15) | |
N | 0.19167 (13) | 0.58321 (12) | 0.48509 (4) | 0.01781 (17) | |
H1N | 0.215 (2) | 0.688 (2) | 0.4873 (7) | 0.028 (4)* | |
H2N | 0.078 (2) | 0.572 (2) | 0.4751 (7) | 0.027 (4)* | |
C1 | 0.25370 (15) | 0.50414 (14) | 0.38787 (4) | 0.0178 (2) | |
C2 | 0.32369 (15) | 0.50221 (14) | 0.44705 (4) | 0.0169 (2) | |
H2 | 0.4333 (19) | 0.5598 (17) | 0.4501 (5) | 0.014 (3)* | |
C3 | 0.35215 (18) | 0.33836 (14) | 0.47338 (5) | 0.0216 (2) | |
H31 | 0.461 (2) | 0.291 (2) | 0.4624 (7) | 0.034 (4)* | |
H32 | 0.252 (2) | 0.2678 (18) | 0.4651 (6) | 0.020 (3)* | |
C4 | 0.35491 (18) | 0.37784 (15) | 0.53500 (5) | 0.0231 (2) | |
H41 | 0.474 (2) | 0.4165 (19) | 0.5458 (6) | 0.023 (4)* | |
H42 | 0.333 (2) | 0.288 (2) | 0.5586 (7) | 0.031 (4)* | |
C5 | 0.21312 (18) | 0.50914 (14) | 0.54142 (4) | 0.0216 (2) | |
H51 | 0.249 (2) | 0.588 (2) | 0.5665 (7) | 0.034 (4)* | |
H52 | 0.097 (2) | 0.472 (2) | 0.5522 (6) | 0.029 (4)* | |
C11 | 0.38492 (16) | 0.42449 (15) | 0.34784 (4) | 0.0203 (2) | |
C12 | 0.56983 (17) | 0.41412 (17) | 0.35809 (5) | 0.0249 (2) | |
H12 | 0.621 (2) | 0.4567 (18) | 0.3914 (6) | 0.023 (4)* | |
C13 | 0.68421 (18) | 0.33778 (18) | 0.32065 (5) | 0.0293 (3) | |
H13 | 0.815 (3) | 0.328 (2) | 0.3287 (7) | 0.034 (4)* | |
C14 | 0.6141 (2) | 0.27055 (17) | 0.27289 (5) | 0.0304 (3) | |
H14 | 0.688 (2) | 0.212 (2) | 0.2487 (7) | 0.030 (4)* | |
C15 | 0.4310 (2) | 0.28317 (18) | 0.26219 (5) | 0.0308 (3) | |
H15 | 0.378 (2) | 0.239 (2) | 0.2276 (7) | 0.035 (4)* | |
C16 | 0.31605 (18) | 0.36049 (15) | 0.29898 (5) | 0.0248 (2) | |
H16 | 0.190 (2) | 0.3690 (18) | 0.2907 (6) | 0.022 (4)* | |
C21 | 0.20488 (17) | 0.67430 (13) | 0.36953 (4) | 0.0196 (2) | |
C22 | 0.33566 (17) | 0.79428 (15) | 0.37116 (5) | 0.0235 (2) | |
H22 | 0.462 (2) | 0.768 (2) | 0.3830 (7) | 0.032 (4)* | |
C23 | 0.2929 (2) | 0.95081 (15) | 0.35549 (5) | 0.0298 (3) | |
H23 | 0.376 (3) | 1.034 (2) | 0.3570 (8) | 0.041 (5)* | |
C24 | 0.1195 (2) | 0.98682 (17) | 0.33770 (5) | 0.0313 (3) | |
H24 | 0.082 (3) | 1.093 (3) | 0.3267 (8) | 0.047 (5)* | |
C25 | −0.0101 (2) | 0.86835 (18) | 0.33570 (6) | 0.0311 (3) | |
H25 | −0.138 (3) | 0.891 (2) | 0.3237 (7) | 0.039 (5)* | |
C26 | 0.03071 (18) | 0.71145 (16) | 0.35168 (5) | 0.0261 (2) | |
H26 | −0.060 (2) | 0.6283 (19) | 0.3521 (7) | 0.027 (4)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl | 0.01711 (12) | 0.01938 (12) | 0.03091 (13) | 0.00004 (10) | 0.00256 (10) | −0.00270 (11) |
F | 0.0205 (3) | 0.0238 (4) | 0.0255 (3) | −0.0042 (3) | −0.0017 (3) | −0.0005 (3) |
N | 0.0170 (4) | 0.0169 (4) | 0.0195 (4) | 0.0007 (4) | 0.0006 (3) | 0.0002 (4) |
C1 | 0.0173 (5) | 0.0171 (5) | 0.0191 (4) | −0.0034 (4) | −0.0007 (4) | 0.0001 (4) |
C2 | 0.0152 (5) | 0.0177 (5) | 0.0177 (4) | −0.0002 (4) | 0.0007 (4) | −0.0001 (4) |
C3 | 0.0245 (6) | 0.0174 (5) | 0.0228 (5) | 0.0035 (4) | 0.0011 (4) | 0.0015 (4) |
C4 | 0.0244 (6) | 0.0234 (6) | 0.0216 (5) | 0.0019 (5) | 0.0000 (4) | 0.0046 (4) |
C5 | 0.0244 (6) | 0.0232 (5) | 0.0174 (4) | 0.0000 (5) | 0.0022 (4) | 0.0012 (4) |
C11 | 0.0257 (5) | 0.0171 (5) | 0.0180 (5) | −0.0007 (5) | 0.0014 (4) | 0.0002 (4) |
C12 | 0.0260 (6) | 0.0286 (6) | 0.0201 (5) | −0.0018 (5) | 0.0019 (4) | −0.0045 (5) |
C13 | 0.0264 (7) | 0.0352 (7) | 0.0261 (6) | 0.0021 (5) | 0.0042 (5) | −0.0031 (5) |
C14 | 0.0393 (7) | 0.0282 (6) | 0.0237 (6) | 0.0039 (6) | 0.0075 (5) | −0.0034 (5) |
C15 | 0.0427 (8) | 0.0305 (6) | 0.0191 (5) | −0.0010 (6) | −0.0006 (5) | −0.0046 (5) |
C16 | 0.0291 (7) | 0.0244 (6) | 0.0208 (5) | −0.0008 (5) | −0.0024 (4) | −0.0011 (4) |
C21 | 0.0235 (5) | 0.0193 (5) | 0.0161 (5) | 0.0005 (4) | 0.0005 (4) | 0.0006 (4) |
C22 | 0.0253 (6) | 0.0225 (6) | 0.0227 (5) | −0.0032 (5) | −0.0033 (4) | 0.0024 (4) |
C23 | 0.0404 (7) | 0.0208 (6) | 0.0281 (6) | −0.0057 (6) | −0.0027 (5) | 0.0030 (4) |
C24 | 0.0425 (8) | 0.0227 (6) | 0.0287 (6) | 0.0057 (6) | 0.0010 (6) | 0.0056 (5) |
C25 | 0.0297 (7) | 0.0325 (7) | 0.0311 (6) | 0.0083 (6) | −0.0007 (5) | 0.0065 (5) |
C26 | 0.0229 (6) | 0.0277 (6) | 0.0277 (6) | 0.0015 (5) | −0.0006 (5) | 0.0031 (5) |
F—C1 | 1.4226 (13) | C12—C13 | 1.4003 (18) |
N—C2 | 1.5093 (15) | C12—H12 | 0.965 (16) |
N—C5 | 1.5159 (15) | C13—C14 | 1.394 (2) |
N—H1N | 0.897 (18) | C13—H13 | 0.993 (19) |
N—H2N | 0.886 (17) | C14—C15 | 1.387 (2) |
C1—C11 | 1.5310 (16) | C14—H14 | 0.942 (17) |
C1—C21 | 1.5335 (17) | C15—C16 | 1.3964 (19) |
C1—C2 | 1.5349 (15) | C15—H15 | 1.000 (18) |
C2—C3 | 1.5267 (17) | C16—H16 | 0.956 (16) |
C2—H2 | 0.948 (14) | C21—C22 | 1.3951 (17) |
C3—C4 | 1.5398 (18) | C21—C26 | 1.3979 (18) |
C3—H31 | 0.936 (18) | C22—C23 | 1.3987 (19) |
C3—H32 | 0.972 (15) | C22—H22 | 1.004 (17) |
C4—C5 | 1.5274 (18) | C23—C24 | 1.390 (2) |
C4—H41 | 0.975 (16) | C23—H23 | 0.93 (2) |
C4—H42 | 0.956 (17) | C24—C25 | 1.380 (2) |
C5—H51 | 0.940 (18) | C24—H24 | 0.97 (2) |
C5—H52 | 0.951 (18) | C25—C26 | 1.4005 (19) |
C11—C12 | 1.3964 (18) | C25—H25 | 1.008 (19) |
C11—C16 | 1.4031 (17) | C26—H26 | 0.969 (17) |
C2—N—C5 | 107.87 (9) | C12—C11—C16 | 119.08 (11) |
C2—N—H1N | 110.6 (11) | C12—C11—C1 | 122.45 (10) |
C5—N—H1N | 109.0 (10) | C16—C11—C1 | 118.47 (11) |
C2—N—H2N | 113.9 (11) | C11—C12—C13 | 120.40 (12) |
C5—N—H2N | 108.0 (11) | C11—C12—H12 | 121.1 (9) |
H1N—N—H2N | 107.4 (15) | C13—C12—H12 | 118.4 (9) |
F—C1—C11 | 106.90 (9) | C14—C13—C12 | 120.21 (13) |
F—C1—C21 | 107.91 (9) | C14—C13—H13 | 119.6 (10) |
C11—C1—C21 | 111.50 (9) | C12—C13—H13 | 120.1 (10) |
F—C1—C2 | 106.43 (8) | C15—C14—C13 | 119.46 (12) |
C11—C1—C2 | 112.40 (9) | C15—C14—H14 | 119.5 (10) |
C21—C1—C2 | 111.36 (9) | C13—C14—H14 | 121.0 (10) |
N—C2—C3 | 103.45 (9) | C14—C15—C16 | 120.78 (12) |
N—C2—C1 | 110.78 (9) | C14—C15—H15 | 120.9 (10) |
C3—C2—C1 | 116.89 (10) | C16—C15—H15 | 118.3 (10) |
N—C2—H2 | 106.3 (8) | C15—C16—C11 | 120.03 (12) |
C3—C2—H2 | 107.6 (8) | C15—C16—H16 | 119.5 (9) |
C1—C2—H2 | 111.1 (8) | C11—C16—H16 | 120.4 (9) |
C2—C3—C4 | 102.77 (9) | C22—C21—C26 | 119.45 (11) |
C2—C3—H31 | 112.3 (11) | C22—C21—C1 | 119.56 (11) |
C4—C3—H31 | 111.1 (11) | C26—C21—C1 | 120.98 (11) |
C2—C3—H32 | 110.5 (9) | C21—C22—C23 | 120.41 (12) |
C4—C3—H32 | 110.1 (9) | C21—C22—H22 | 120.0 (10) |
H31—C3—H32 | 110.0 (13) | C23—C22—H22 | 119.6 (10) |
C5—C4—C3 | 104.17 (9) | C24—C23—C22 | 119.83 (13) |
C5—C4—H41 | 110.9 (9) | C24—C23—H23 | 117.6 (11) |
C3—C4—H41 | 110.4 (9) | C22—C23—H23 | 122.6 (12) |
C5—C4—H42 | 112.6 (10) | C25—C24—C23 | 120.00 (13) |
C3—C4—H42 | 114.7 (10) | C25—C24—H24 | 116.7 (12) |
H41—C4—H42 | 104.2 (14) | C23—C24—H24 | 123.3 (12) |
N—C5—C4 | 105.80 (9) | C24—C25—C26 | 120.70 (13) |
N—C5—H51 | 109.5 (10) | C24—C25—H25 | 121.8 (11) |
C4—C5—H51 | 111.9 (11) | C26—C25—H25 | 117.5 (11) |
N—C5—H52 | 106.9 (10) | C21—C26—C25 | 119.61 (13) |
C4—C5—H52 | 114.4 (10) | C21—C26—H26 | 118.8 (9) |
H51—C5—H52 | 108.1 (14) | C25—C26—H26 | 121.6 (9) |
C5—N—C2—C3 | 25.78 (11) | F—C1—C11—C12 | −141.65 (12) |
C5—N—C2—C1 | 151.81 (9) | C21—C1—C11—C12 | 100.63 (14) |
F—C1—C2—N | −63.89 (11) | C2—C1—C11—C12 | −25.23 (16) |
C11—C1—C2—N | 179.41 (9) | F—C1—C11—C16 | 38.68 (14) |
C21—C1—C2—N | 53.47 (12) | C21—C1—C11—C16 | −79.04 (13) |
F—C1—C2—C3 | 54.23 (12) | C2—C1—C11—C16 | 155.10 (11) |
C11—C1—C2—C3 | −62.47 (13) | F—C1—C21—C22 | 174.06 (10) |
C21—C1—C2—C3 | 171.60 (10) | C11—C1—C21—C22 | −68.83 (13) |
N—C2—C3—C4 | −38.77 (11) | C2—C1—C21—C22 | 57.60 (14) |
C1—C2—C3—C4 | −160.79 (10) | F—C1—C21—C26 | −5.33 (14) |
C2—C3—C4—C5 | 37.53 (13) | C11—C1—C21—C26 | 111.78 (12) |
C2—N—C5—C4 | −2.40 (12) | C2—C1—C21—C26 | −121.79 (11) |
C3—C4—C5—N | −21.77 (13) |
D—H···A | D—H | H···A | D···A | D—H···A |
N—H1N···Cl | 0.897 (18) | 2.196 (17) | 3.0664 (17) | 163.4 (14) |
N—H2N···Cli | 0.886 (17) | 2.229 (17) | 3.0712 (16) | 158.9 (14) |
Symmetry code: (i) x−1/2, −y+3/2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C17H19FN+·Cl− |
Mr | 291.78 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 120 |
a, b, c (Å) | 7.415 (3), 8.353 (4), 24.406 (10) |
V (Å3) | 1511.6 (11) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.25 |
Crystal size (mm) | 0.58 × 0.45 × 0.14 |
Data collection | |
Diffractometer | SMART 1K CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1998); Rint = 0.030 before correction |
Tmin, Tmax | 0.847, 0.962 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14327, 4007, 3844 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.685 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.027, 0.067, 1.08 |
No. of reflections | 4007 |
No. of parameters | 257 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.29, −0.19 |
Absolute structure | Flack (1983) |
Absolute structure parameter | −0.01 (4) |
Computer programs: SMART (Bruker, 1999), SMART, SAINT (Bruker, 1999), SHELXTL (Bruker, 1997), SHELXTL.
F—C1 | 1.4226 (13) | C1—C2 | 1.5349 (15) |
N—C2 | 1.5093 (15) | C2—C3 | 1.5267 (17) |
N—C5 | 1.5159 (15) | C3—C4 | 1.5398 (18) |
C1—C11 | 1.5310 (16) | C4—C5 | 1.5274 (18) |
C1—C21 | 1.5335 (17) | ||
C2—N—C5 | 107.87 (9) | N—C2—C3 | 103.45 (9) |
F—C1—C11 | 106.90 (9) | N—C2—C1 | 110.78 (9) |
F—C1—C21 | 107.91 (9) | C3—C2—C1 | 116.89 (10) |
C11—C1—C21 | 111.50 (9) | C2—C3—C4 | 102.77 (9) |
F—C1—C2 | 106.43 (8) | C5—C4—C3 | 104.17 (9) |
C11—C1—C2 | 112.40 (9) | N—C5—C4 | 105.80 (9) |
C21—C1—C2 | 111.36 (9) | ||
F—C1—C2—N | −63.89 (11) | F—C1—C11—C16 | 38.68 (14) |
F—C1—C2—C3 | 54.23 (12) | F—C1—C21—C26 | −5.33 (14) |
D—H···A | D—H | H···A | D···A | D—H···A |
N—H1N···Cl | 0.897 (18) | 2.196 (17) | 3.0664 (17) | 163.4 (14) |
N—H2N···Cli | 0.886 (17) | 2.229 (17) | 3.0712 (16) | 158.9 (14) |
Symmetry code: (i) x−1/2, −y+3/2, −z+1. |
Subscribe to Acta Crystallographica Section C: Structural Chemistry
The full text of this article is available to subscribers to the journal.
- Information on subscribing
- Sample issue
- Purchase subscription
- Reduced-price subscriptions
- If you have already subscribed, you may need to register
Homochiral amines are valuable as auxiliaries in enantioselective C—C bond-forming reactions (Morrison, 1983) and as chiral resolving agents (Parker, 1991). (-)-(S)-2-(Fluorodiphenylmethyl)pyrrolidine, (II), was prepared and studied (Bailey et al., 1997; Tavasli, 1999; O'Hagan et al., 2000) as a potential auxiliary in asymmetric alkylation reactions and as a chiral solvating agent for 1H NMR analysis of the enantiomeric purity of chiral carboxylic acids and alcohols. In the course of this work, we studied the structure of the title compound, (I), the hydrochloride salt of (II).
The five-membered heterocycle adopts an envelope conformation; the N, C2, C4 and C5 atoms are coplanar within experimental error, with C3 deviating from their mean plane by 0.60 Å. The fluorodiphenylmethyl substituent is in an equatorial orientation. The conformation around the C1—C2 bond is staggered, with the F atom directed between N and C3. Cations and anions are linked by N—H···Cl hydrogen bonds into an infinite chain, spiralling around the 21 axis (x, 3/4 − y, 1/2 − z).
Although the F—C1—C2—N torsion angle of −63.9 (1)° brings the H2N atom close to the F atom, the F···H2N distance of 2.53 (2) Å and a narrow N—H—F angle of 104 (2)° are indicative of a slightly shortened van der Waals contact (Howard et al., 1996) rather than an intramolecular hydrogen bond. Genuine intermolecular N—H···F—C bonds (which are extremely rare) display H···F distances from 2.10 to 2.33 Å (Dunitz & Taylor, 1997) and N—H···F arrangements much closer to linear.