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The structure of the title compound, C
14H
12ClNO
3, (I), comprises essentially planar molecules stacked parallel to the
a axis. C-H
O hydrogen-bonding interactions exist to both naphthoquinone O atoms and the Cl atom, but not to the morpholine O atom.
Supporting information
CCDC reference: 153960
Data collection: DENZO (Otwinowski & Minor, 1997) and COLLECT (Hooft, 1998); cell refinement: DENZO and COLLECT; data reduction: DENZO and COLLECT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); software used to prepare material for publication: SHELXL97.
2-Chloro-3-(4-morpholino)-1,4-naphthoquinone
top
Crystal data top
C14H12ClNO3 | F(000) = 288 |
Mr = 277.70 | Dx = 1.518 Mg m−3 |
Triclinic, P1 | Melting point: 428 - 430 K K |
a = 5.0386 (1) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 10.3948 (2) Å | Cell parameters from 4135 reflections |
c = 12.7421 (3) Å | θ = 2.9–27.5° |
α = 67.2038 (12)° | µ = 0.32 mm−1 |
β = 84.4066 (10)° | T = 150 K |
γ = 81.2678 (12)° | Plate, red |
V = 607.56 (2) Å3 | 0.40 × 0.20 × 0.08 mm |
Z = 2 | |
Data collection top
Enraf Nonius KappaCCD area-detector diffractometer | 2761 independent reflections |
Radiation source: Enraf Nonius FR591 rotating anode | 2449 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.031 |
Detector resolution: 9.091 pixels mm-1 | θmax = 27.5°, θmin = 3.2° |
φ and ω scans | h = −6→6 |
Absorption correction: multi-scan (SORTAV; Blessing, 1995) | k = −13→13 |
Tmin = 0.884, Tmax = 0.977 | l = −15→16 |
6621 measured reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.142 | H-atom parameters constrained |
S = 1.16 | w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3 |
2761 reflections | (Δ/σ)max < 0.001 |
172 parameters | Δρmax = 0.34 e Å−3 |
0 restraints | Δρmin = −0.37 e Å−3 |
Special details top
Experimental. PLEASE NOTE cell_measurement_ fields are not relevant to area detector data, the
entire data set is used to refine the cell, which is indexed from all observed
reflections in a 10 degree phi range. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.5044 (3) | 0.20176 (14) | 0.10486 (11) | 0.0230 (3) | |
O1 | 0.4184 (2) | 0.28268 (11) | 0.01277 (9) | 0.0345 (3) | |
C2 | 0.4346 (3) | 0.05762 (14) | 0.15913 (11) | 0.0209 (3) | |
Cl2 | 0.20776 (6) | 0.01615 (3) | 0.08691 (3) | 0.02830 (17) | |
C3 | 0.5264 (2) | −0.03813 (13) | 0.26084 (11) | 0.0203 (3) | |
N31 | 0.4885 (2) | −0.17681 (12) | 0.30333 (10) | 0.0247 (3) | |
C32 | 0.4332 (3) | −0.26062 (15) | 0.42384 (12) | 0.0280 (3) | |
H111 | 0.3748 | −0.1981 | 0.4661 | 0.035* | |
H112 | 0.5974 | −0.3226 | 0.4581 | 0.035* | |
C33 | 0.2117 (3) | −0.34858 (15) | 0.43056 (13) | 0.0329 (3) | |
H121 | 0.1748 | −0.4083 | 0.5112 | 0.041* | |
H122 | 0.0451 | −0.2853 | 0.4012 | 0.041* | |
O34 | 0.2832 (2) | −0.43609 (10) | 0.36633 (9) | 0.0344 (3) | |
C35 | 0.3313 (3) | −0.35325 (15) | 0.24931 (13) | 0.0303 (3) | |
H131 | 0.1645 | −0.2919 | 0.2177 | 0.038* | |
H132 | 0.3831 | −0.4156 | 0.2065 | 0.038* | |
C36 | 0.5524 (3) | −0.26367 (14) | 0.23482 (12) | 0.0244 (3) | |
H141 | 0.7240 | −0.3250 | 0.2586 | 0.030* | |
H142 | 0.5746 | −0.2023 | 0.1535 | 0.030* | |
C4 | 0.6912 (3) | 0.01070 (14) | 0.32853 (12) | 0.0230 (3) | |
O4 | 0.7648 (3) | −0.06883 (11) | 0.42194 (10) | 0.0419 (3) | |
C5 | 0.9383 (3) | 0.19717 (14) | 0.33317 (12) | 0.0242 (3) | |
H5 | 0.9982 | 0.1350 | 0.4061 | 0.030* | |
C6 | 1.0187 (3) | 0.33047 (15) | 0.28378 (13) | 0.0293 (3) | |
H6 | 1.1341 | 0.3596 | 0.3227 | 0.037* | |
C7 | 0.9300 (3) | 0.42136 (14) | 0.17709 (13) | 0.0304 (3) | |
H7 | 0.9838 | 0.5129 | 0.1438 | 0.038* | |
C8 | 0.7641 (3) | 0.37966 (14) | 0.11893 (12) | 0.0274 (3) | |
H8 | 0.7053 | 0.4422 | 0.0459 | 0.034* | |
C9 | 0.6838 (3) | 0.24580 (13) | 0.16766 (11) | 0.0203 (3) | |
C10 | 0.7691 (3) | 0.15463 (13) | 0.27548 (11) | 0.0206 (3) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0255 (7) | 0.0223 (7) | 0.0224 (7) | 0.0005 (5) | −0.0045 (5) | −0.0100 (5) |
O1 | 0.0511 (7) | 0.0251 (5) | 0.0262 (6) | −0.0009 (5) | −0.0165 (5) | −0.0064 (4) |
C2 | 0.0199 (6) | 0.0245 (6) | 0.0225 (7) | −0.0037 (5) | −0.0035 (5) | −0.0124 (5) |
Cl2 | 0.0250 (2) | 0.0357 (3) | 0.0301 (3) | −0.00578 (16) | −0.00844 (16) | −0.01645 (18) |
C3 | 0.0202 (6) | 0.0223 (6) | 0.0212 (7) | −0.0059 (5) | −0.0001 (5) | −0.0103 (5) |
N31 | 0.0335 (7) | 0.0221 (6) | 0.0221 (6) | −0.0111 (5) | 0.0015 (5) | −0.0101 (5) |
C32 | 0.0349 (8) | 0.0251 (7) | 0.0240 (7) | −0.0115 (6) | 0.0004 (6) | −0.0070 (6) |
C33 | 0.0363 (8) | 0.0305 (8) | 0.0325 (8) | −0.0139 (6) | 0.0072 (6) | −0.0109 (6) |
O34 | 0.0421 (6) | 0.0267 (5) | 0.0379 (6) | −0.0167 (5) | 0.0042 (5) | −0.0129 (5) |
C35 | 0.0319 (7) | 0.0291 (7) | 0.0357 (8) | −0.0140 (6) | 0.0003 (6) | −0.0152 (6) |
C36 | 0.0248 (7) | 0.0241 (6) | 0.0290 (7) | −0.0080 (5) | 0.0010 (5) | −0.0138 (6) |
C4 | 0.0274 (7) | 0.0198 (6) | 0.0229 (7) | −0.0038 (5) | −0.0065 (5) | −0.0078 (5) |
O4 | 0.0642 (8) | 0.0265 (6) | 0.0332 (6) | −0.0144 (5) | −0.0259 (6) | −0.0006 (5) |
C5 | 0.0280 (7) | 0.0243 (6) | 0.0239 (7) | −0.0047 (5) | −0.0044 (5) | −0.0119 (6) |
C6 | 0.0313 (7) | 0.0303 (7) | 0.0335 (8) | −0.0102 (6) | −0.0014 (6) | −0.0176 (6) |
C7 | 0.0372 (8) | 0.0225 (7) | 0.0355 (8) | −0.0117 (6) | 0.0024 (6) | −0.0135 (6) |
C8 | 0.0327 (7) | 0.0228 (7) | 0.0253 (7) | −0.0032 (6) | −0.0019 (6) | −0.0075 (6) |
C9 | 0.0230 (6) | 0.0185 (6) | 0.0213 (6) | −0.0013 (5) | −0.0021 (5) | −0.0097 (5) |
C10 | 0.0229 (7) | 0.0187 (6) | 0.0219 (7) | −0.0016 (5) | −0.0027 (5) | −0.0094 (5) |
Geometric parameters (Å, º) top
C1—O1 | 1.2229 (17) | C35—H131 | 0.9900 |
C1—C2 | 1.4685 (19) | C35—H132 | 0.9900 |
C1—C9 | 1.4892 (17) | C36—H141 | 0.9900 |
C2—C3 | 1.3645 (19) | C36—H142 | 0.9900 |
C2—Cl2 | 1.7322 (12) | C4—O4 | 1.2116 (18) |
C3—N31 | 1.3661 (16) | C4—C10 | 1.4806 (18) |
C3—C4 | 1.5160 (17) | C5—C6 | 1.3875 (19) |
N31—C32 | 1.4657 (18) | C5—C10 | 1.3968 (17) |
N31—C36 | 1.4658 (15) | C5—H5 | 0.9500 |
C32—C33 | 1.5230 (18) | C6—C7 | 1.391 (2) |
C32—H111 | 0.9900 | C6—H6 | 0.9500 |
C32—H112 | 0.9900 | C7—C8 | 1.384 (2) |
C33—O34 | 1.4307 (16) | C7—H7 | 0.9500 |
C33—H121 | 0.9900 | C8—C9 | 1.3922 (19) |
C33—H122 | 0.9900 | C8—H8 | 0.9500 |
O34—C35 | 1.4218 (18) | C9—C10 | 1.3975 (18) |
C35—C36 | 1.5110 (17) | | |
| | | |
O1—C1—C2 | 121.87 (12) | C36—C35—H132 | 109.5 |
O1—C1—C9 | 121.24 (12) | H131—C35—H132 | 108.1 |
C2—C1—C9 | 116.88 (11) | N31—C36—C35 | 110.60 (10) |
C3—C2—C1 | 124.69 (11) | N31—C36—H141 | 109.5 |
C3—C2—Cl2 | 120.44 (10) | C35—C36—H141 | 109.5 |
C1—C2—Cl2 | 114.82 (10) | N31—C36—H142 | 109.5 |
C2—C3—N31 | 124.03 (11) | C35—C36—H142 | 109.5 |
C2—C3—C4 | 118.06 (11) | H141—C36—H142 | 108.1 |
N31—C3—C4 | 117.85 (12) | O4—C4—C10 | 121.35 (12) |
C3—N31—C32 | 124.81 (11) | O4—C4—C3 | 120.22 (12) |
C3—N31—C36 | 121.78 (11) | C10—C4—C3 | 118.37 (12) |
C32—N31—C36 | 112.39 (11) | C6—C5—C10 | 119.88 (13) |
N31—C32—C33 | 107.81 (12) | C6—C5—H5 | 120.1 |
N31—C32—H111 | 110.1 | C10—C5—H5 | 120.1 |
C33—C32—H111 | 110.1 | C5—C6—C7 | 119.87 (12) |
N31—C32—H112 | 110.1 | C5—C6—H6 | 120.1 |
C33—C32—H112 | 110.1 | C7—C6—H6 | 120.1 |
H111—C32—H112 | 108.5 | C8—C7—C6 | 120.63 (12) |
O34—C33—C32 | 111.99 (11) | C8—C7—H7 | 119.7 |
O34—C33—H121 | 109.2 | C6—C7—H7 | 119.7 |
C32—C33—H121 | 109.2 | C7—C8—C9 | 119.83 (13) |
O34—C33—H122 | 109.2 | C7—C8—H8 | 120.1 |
C32—C33—H122 | 109.2 | C9—C8—H8 | 120.1 |
H121—C33—H122 | 107.9 | C8—C9—C10 | 119.84 (12) |
C35—O34—C33 | 110.69 (10) | C8—C9—C1 | 119.58 (12) |
O34—C35—C36 | 110.76 (11) | C10—C9—C1 | 120.57 (12) |
O34—C35—H131 | 109.5 | C5—C10—C9 | 119.93 (12) |
C36—C35—H131 | 109.5 | C5—C10—C4 | 118.96 (12) |
O34—C35—H132 | 109.5 | C9—C10—C4 | 121.07 (11) |
| | | |
O1—C1—C2—C3 | 179.13 (13) | C2—C3—C4—C10 | −6.58 (19) |
C9—C1—C2—C3 | −1.4 (2) | N31—C3—C4—C10 | 170.77 (11) |
O1—C1—C2—Cl2 | −3.65 (18) | C10—C5—C6—C7 | 0.2 (2) |
C9—C1—C2—Cl2 | 175.86 (8) | C5—C6—C7—C8 | −0.7 (2) |
C1—C2—C3—N31 | −171.18 (12) | C6—C7—C8—C9 | 0.3 (2) |
Cl2—C2—C3—N31 | 11.74 (19) | C7—C8—C9—C10 | 0.5 (2) |
C1—C2—C3—C4 | 6.0 (2) | C7—C8—C9—C1 | 179.75 (11) |
Cl2—C2—C3—C4 | −171.09 (9) | O1—C1—C9—C8 | −2.6 (2) |
C2—C3—N31—C32 | −142.17 (14) | C2—C1—C9—C8 | 177.94 (11) |
C4—C3—N31—C32 | 40.65 (19) | O1—C1—C9—C10 | 176.66 (12) |
C2—C3—N31—C36 | 50.26 (19) | C2—C1—C9—C10 | −2.85 (19) |
C4—C3—N31—C36 | −126.92 (13) | C6—C5—C10—C9 | 0.7 (2) |
C3—N31—C32—C33 | 136.77 (13) | C6—C5—C10—C4 | 178.52 (12) |
C36—N31—C32—C33 | −54.65 (15) | C8—C9—C10—C5 | −1.1 (2) |
N31—C32—C33—O34 | 57.20 (16) | C1—C9—C10—C5 | 179.73 (11) |
C32—C33—O34—C35 | −60.29 (16) | C8—C9—C10—C4 | −178.81 (12) |
C33—O34—C35—C36 | 58.29 (15) | C1—C9—C10—C4 | 2.0 (2) |
C3—N31—C36—C35 | −136.06 (13) | O4—C4—C10—C5 | 2.2 (2) |
C32—N31—C36—C35 | 54.96 (16) | C3—C4—C10—C5 | −175.08 (11) |
O34—C35—C36—N31 | −55.48 (15) | O4—C4—C10—C9 | 179.94 (14) |
C2—C3—C4—O4 | 176.14 (13) | C3—C4—C10—C9 | 2.69 (19) |
N31—C3—C4—O4 | −6.5 (2) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···O4i | 0.95 | 2.41 | 3.2914 (18) | 155 |
C33—H122···O4ii | 0.99 | 2.56 | 3.3692 (19) | 139 |
C36—H142···Cl2 | 0.99 | 2.61 | 3.1439 (14) | 114 |
C36—H142···O1iii | 0.99 | 2.56 | 3.2246 (17) | 125 |
Symmetry codes: (i) −x+2, −y, −z+1; (ii) x−1, y, z; (iii) −x+1, −y, −z. |
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