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In the title compound, C
14H
10N
4, all the atoms are close to being coplanar (r.m.s. deviation 0.0098 Å) except for the imino H atoms. The molecule forms a one-dimensional chain through intermolecular N-H
N hydrogen bonds.
Supporting information
CCDC reference: 156221
The title compound was prepared from 1,2-diaminobenzene and oxamide according to the method of Fieselmann et al. (1978). Single crystals suitable for X-ray measurement were obtained by slow evaporation at room temperature from an ethylene glycol solution.
All the H atoms were located from the difference Fourier map and refined isotropically. The C—H range is 0.92 (3)–1.01 (2) Å and the N—H distance is 0.94 (4) Å.
Data collection: MSC/AFC Diffractometer Control Software
(Molecular Structure Corporation, 1990); cell refinement: MSC/AFC Diffractometer Control Software; data reduction: TEXSAN
(Molecular Structure Corporation and Rigaku Corporation, 1999); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: TEXSAN; software used to prepare material for publication: TEXSAN.
Crystal data top
C14H10N4 | Dx = 1.354 Mg m−3 |
Mr = 234.26 | Mo Kα radiation, λ = 0.7107 Å |
Orthorhombic, Ibam | Cell parameters from 25 reflections |
Hall symbol: -I 2 2c | θ = 12.4–14.9° |
a = 11.331 (3) Å | µ = 0.09 mm−1 |
b = 10.183 (2) Å | T = 296 K |
c = 9.962 (2) Å | Prismatic, yellow |
V = 1149.4 (4) Å3 | 0.30 × 0.10 × 0.10 mm |
Z = 4 | |
Data collection top
Rigaku AFC-5R diffractometer | Rint = 0.015 |
ω–2θ scans | θmax = 27.5° |
Absorption correction: ψ scan (North et al., 1968) | h = −1→14 |
Tmin = 0.937, Tmax = 0.996 | k = −1→13 |
985 measured reflections | l = −1→12 |
703 independent reflections | 3 standard reflections every 150 reflections |
321 reflections with I > 2σ(I) | intensity decay: 0.6% |
Refinement top
Refinement on F2 | All H-atom parameters refined |
R[F2 > 2σ(F2)] = 0.043 | w = 1/[σ2(Fo2) + (0.045(Max(Fo2,0) + 2Fc2)/3)2] |
wR(F2) = 0.127 | (Δ/σ)max = 0.004 |
S = 1.06 | Δρmax = 0.48 e Å−3 |
703 reflections | Δρmin = −0.43 e Å−3 |
55 parameters | |
Crystal data top
C14H10N4 | V = 1149.4 (4) Å3 |
Mr = 234.26 | Z = 4 |
Orthorhombic, Ibam | Mo Kα radiation |
a = 11.331 (3) Å | µ = 0.09 mm−1 |
b = 10.183 (2) Å | T = 296 K |
c = 9.962 (2) Å | 0.30 × 0.10 × 0.10 mm |
Data collection top
Rigaku AFC-5R diffractometer | 321 reflections with I > 2σ(I) |
Absorption correction: ψ scan (North et al., 1968) | Rint = 0.015 |
Tmin = 0.937, Tmax = 0.996 | 3 standard reflections every 150 reflections |
985 measured reflections | intensity decay: 0.6% |
703 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.043 | 55 parameters |
wR(F2) = 0.127 | All H-atom parameters refined |
S = 1.06 | Δρmax = 0.48 e Å−3 |
703 reflections | Δρmin = −0.43 e Å−3 |
Special details top
Refinement. Refinement using reflections with F2 > 0.0 σ(F2). The weighted R-factor (wR) and goodness of fit (S) are based on F2. R-factor (gt) are based on F. The threshold expression of F2 > 2.0 σ(F2) is used only for calculating R-factor (gt). |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
N1 | 0.8799 (1) | 0.0477 (2) | −0.1130 (2) | 0.0569 (6) | |
C1 | 0.9404 (2) | 0.0241 (3) | 0.0000 | 0.0504 (10) | |
C2 | 0.7704 (2) | 0.0931 (2) | −0.0694 (2) | 0.0513 (6) | |
C3 | 0.6723 (2) | 0.1345 (3) | −0.1406 (3) | 0.0743 (9) | |
C4 | 0.5757 (2) | 0.1744 (3) | −0.0691 (3) | 0.0669 (8) | |
H1 | 0.897 (3) | 0.008 (4) | −0.196 (4) | 0.046 (10)* | 0.50 |
H2 | 0.674 (2) | 0.137 (3) | −0.233 (3) | 0.102 (9)* | |
H3 | 0.503 (2) | 0.205 (2) | −0.119 (2) | 0.076 (7)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.045 (1) | 0.082 (2) | 0.045 (1) | 0.009 (1) | −0.0070 (9) | 0.000 (1) |
C1 | 0.042 (2) | 0.052 (2) | 0.057 (2) | −0.006 (1) | 0.0000 | 0.0000 |
C2 | 0.045 (1) | 0.057 (1) | 0.052 (1) | 0.003 (1) | 0.001 (1) | 0.000 (1) |
C3 | 0.060 (1) | 0.105 (2) | 0.058 (2) | 0.022 (1) | −0.008 (1) | 0.005 (2) |
C4 | 0.050 (1) | 0.077 (2) | 0.074 (2) | 0.017 (1) | −0.007 (1) | −0.001 (1) |
Geometric parameters (Å, º) top
N1—C1 | 1.339 (2) | C2—C3 | 1.385 (3) |
N1—C2 | 1.394 (3) | C3—C4 | 1.367 (4) |
N1—H1 | 0.94 (4) | C3—H2 | 0.92 (3) |
C1—C1i | 1.436 (6) | C4—C4ii | 1.377 (5) |
C2—C2ii | 1.382 (4) | C4—H3 | 1.01 (2) |
| | | |
N1···H3iii | 2.88 (2) | C2···H3iii | 3.38 (2) |
N1···N1iv | 2.898 (4) | C2···H2xii | 3.44 (3) |
N1···H1v | 3.19 (3) | C3···H2iv | 3.04 (3) |
N1···H2iv | 3.37 (3) | C3···H2xii | 3.17 (3) |
C1···H1vi | 2.70 (3) | C3···H3xiii | 3.20 (2) |
C1···H3vii | 3.09 (2) | C3···H1iv | 3.36 (3) |
C1···H3iii | 3.09 (2) | C3···C3iv | 3.501 (6) |
C1···H1iv | 3.09 (4) | C4···H3xiii | 3.25 (2) |
C1···H1viii | 3.09 (4) | C4···H2xiii | 3.47 (3) |
C1···C4vii | 3.500 (4) | H1···H1v | 2.56 (6) |
C1···C4iii | 3.500 (4) | H1···H2iv | 3.02 (4) |
C1···H3ix | 3.52 (2) | H1···H3iii | 3.25 (5) |
C1···H3x | 3.52 (2) | H1···H3x | 3.37 (5) |
C1···H1v | 3.55 (4) | H2···H3xiii | 2.59 (4) |
C1···H1xi | 3.55 (4) | H2···H2iv | 2.81 (5) |
C1···C2vi | 3.555 (4) | H2···H2xii | 2.89 (5) |
C2···H1iv | 2.93 (3) | H3···H3xiii | 2.61 (4) |
C2···H2iv | 3.25 (3) | | |
| | | |
C1—N1—C2 | 104.7 (2) | C2ii—C2—C3 | 120.8 (1) |
C1—N1—H1 | 123 (2) | C2—C3—C4 | 117.8 (2) |
C2—N1—H1 | 127 (1) | C2—C3—H2 | 120 (1) |
N1—C1—N1ii | 114.3 (3) | C4—C3—H2 | 121 (1) |
N1—C1—C1i | 122.8 (1) | C3—C4—C4ii | 121.4 (2) |
N1—C1ii—C1i | 122.8 (1) | C3—C4—H3 | 119 (1) |
N1—C2—C2ii | 108.2 (1) | C4ii—C4—H3 | 119 (1) |
N1—C2—C3 | 131.0 (2) | | |
| | | |
N1—C1—N1ii—C2ii | −1.1 (3) | C1—N1—C2—C3 | 179.0 (3) |
N1—C1—C1i—N1i | 0.9 (7) | C1—N1ii—C2ii—C2 | 0.6 (2) |
N1—C1—C1i—N1vi | 180.0 | C1—N1ii—C2ii—C3ii | −179.0 (3) |
N1—C2—C2ii—N1ii | 0.0 | C2—C2ii—C3ii—C4ii | 0.4 (3) |
N1—C2—C2ii—C3ii | 179.6 (3) | C2—C3—C4—C4ii | 0.4 (3) |
N1—C2—C3—C4 | −179.9 (2) | C3—C2—C2ii—C3ii | 0.0 |
C1—N1—C2—C2ii | −0.6 (2) | C3—C4—C4ii—C3ii | 0.0 |
Symmetry codes: (i) −x+2, −y, z; (ii) x, y, −z; (iii) x+1/2, −y+1/2, z; (iv) x, −y, −z−1/2; (v) −x+2, y, −z−1/2; (vi) −x+2, −y, −z; (vii) x+1/2, −y+1/2, −z; (viii) x, −y, z+1/2; (ix) −x+3/2, y−1/2, −z; (x) −x+3/2, y−1/2, z; (xi) −x+2, y, z+1/2; (xii) −x+3/2, −y+1/2, −z−1/2; (xiii) −x+1, y, −z−1/2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···N1iv | 0.94 (4) | 1.99 (4) | 2.897 (3) | 160 (3) |
Symmetry code: (iv) x, −y, −z−1/2. |
Experimental details
Crystal data |
Chemical formula | C14H10N4 |
Mr | 234.26 |
Crystal system, space group | Orthorhombic, Ibam |
Temperature (K) | 296 |
a, b, c (Å) | 11.331 (3), 10.183 (2), 9.962 (2) |
V (Å3) | 1149.4 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.30 × 0.10 × 0.10 |
|
Data collection |
Diffractometer | Rigaku AFC-5R diffractometer |
Absorption correction | ψ scan (North et al., 1968) |
Tmin, Tmax | 0.937, 0.996 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 985, 703, 321 |
Rint | 0.015 |
(sin θ/λ)max (Å−1) | 0.650 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.127, 1.06 |
No. of reflections | 703 |
No. of parameters | 55 |
No. of restraints | ? |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.48, −0.43 |
Selected geometric parameters (Å, º) topN1—C1 | 1.339 (2) | C2—C3 | 1.385 (3) |
N1—C2 | 1.394 (3) | C3—C4 | 1.367 (4) |
C1—C1i | 1.436 (6) | C4—C4ii | 1.377 (5) |
C2—C2ii | 1.382 (4) | | |
| | | |
C1—N1—C2 | 104.7 (2) | N1—C1—C1i | 122.8 (1) |
N1—C1—N1ii | 114.3 (3) | N1—C1ii—C1i | 122.8 (1) |
Symmetry codes: (i) −x+2, −y, z; (ii) x, y, −z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···N1iii | 0.94 (4) | 1.99 (4) | 2.897 (3) | 160 (3) |
Symmetry code: (iii) x, −y, −z−1/2. |
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The title compound, (I), is well known to act as a bridging ligand in transition metal compounds (Fieselmann et al., 1978; Haga et al., 1987). The asymmetric unit contains one quarter of the molecule and the other parts are twofold-rotation and mirror related. The rotation axis passes through the centre of the C1—C1' bond, while the mirror contains this bond. The occupancy of the imino H1 atom was set at 0.5 due to the mirror symmetry operation. The average bond distances and angles for the benzimidazole moiety are in good agreement with those of other substituted bis-benzimidazole compounds (Matthews et al., 1996; Ozbey et al., 1998; Bei et al., 2000). \scheme
The C1—C1' bond length of 1.435 (5) Å is close to the value for a single-bond length between trigonally linked C atoms (Cruickshank & Sparks, 1960; Bei et al., 2000). The molecule forms a one-dimensional chain through N1—H1···N1(x, −y, −1/2 − z) intermolecular hydrogen bonds.