Buy article online - an online subscription or single-article purchase is required to access this article.
Download citation
Download citation
link to html
In the title compound, C13H16O4, the cyclo­hexene rings adopt a sofa conformation. Adjacent mol­ecules are connected by C-H...O intermolecular interactions. Each mol­ecule is characterized by O-H...O intramolecular hydrogen bonds. The anti arrangement of the enolic OH group and the carbonyl O atom in the solid state is similar to the anti arrangement of the NH and carbonyl groups in indigo.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270100012117/qa0324sup1.cif
Contains datablocks I, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108270100012117/qa0324Isup2.hkl
Contains datablock I

CCDC reference: 152678

Comment top

The bond lengths and angles of the two cyclohexene rings in the title compound, (I), conform to expectations (Peter et al., 1992; Lalancette et al., 1997; Govindasamy & Subramanian, 1997).

Rings 1 (C1–C6) and 2 (C1'–C6') have a sofa conformation. The asymmetry parameters [ΔCs(C1) = 0.026 (1) and ΔCs(C1') = 0.017 (1); Nardelli, 1995] satisfy the condition for the sofa conformation. The values of the total puckering amplitudes [QT = 0.476 (2) and 0.477 (3) Å for rings 1 and 2, respectively; Cremer & Pople, 1975] indicate that the two rings have the same conformation. Atoms O2 and O4 deviate from the ring 2 by 0.134 (2) and 0.062 (2) Å, respectively. Atoms O1 and O3 deviate from the ring 1 by 0.097 (2) and 0.066 (2) Å, respectively. Atom C7 deviates from rings 1 and 2 by −0.460 (2) and −0.394 (2) Å, respectively. The deviations of atoms C4 and C4' are −0.295 (2) and −0.364 (3) Å with respect to rings 1 and 2.

The two cyclohexene rings are attracted towards each other by O—H···O intramolecular hydrogen bonds. Atoms O2 and O3 act as donors whereas O4 and O1 act as acceptors. The O···O distance agrees well with earlier reported values (Li et al., 1999; Steiner, 1997; Paixao et al., 1999; Komen et al., 1999; Parvez et al., 1999). The average O···O distance observed in the present structure is 2.615 Å. The sequences of the bond distances along the systems: O1—C2—C1—C6—O3 and O4—C6'—C1'—C2'—O2 are indicative of some π conjugation, enhancing the polarization of charge that produces the two O—H···O hydrogen bonds. These are rather strong as indicated by the short values (1.78 and 1.84 Å) of the H···O distances. The angle C1—C7—C1' is 117.0 (2)°. The conformation of the two halves of the molecule is determined by the two O—H···O hydrogen bonds.

The packing is stabilized by intermolecular C—H···O interactions. The atoms C5 and C5' act as donors to form intermolecular interactions with the symmetry-related atoms O1 and O2.

Experimental top

The title compound was prepared by the addition of a 40% aqueous solution of formalin (6 ml) to a solution of cyclohexane-1,3-dione (15 g, 0.13 mol) in water (200 ml) and warming until the solution became cloudy. The 2–2'methylenebis(cyclohexane-1,3-dione) started to separate out. The reaction mixture was allowed to stand overnight and the ketone was collected by filtration and dried. Yield 8.0 g (50.6%), m.p. 403–405 K (Setter, 1995).

Refinement top

The H atoms are fixed geometrically and allowed to refine riding on the corresponding non-H atoms.

Computing details top

Data collection: CAD-4 Software (Enraf-Nonius, 1989); cell refinement: CAD-4 Software; data reduction: SDP (Frenz, 1978); program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); software used to prepare material for publication: SHELXL97 and PARST (Nardelli, 1995).

2,2'-Methylenebis(3-hydroxy-2-cyclohexen-1-one) top
Crystal data top
C13H16O4Dx = 1.309 Mg m3
Mr = 236.26Cu Kα radiation, λ = 1.54184 Å
Orthorhombic, PbcaCell parameters from 15 reflections
a = 9.9313 (18) Åθ = 2–28°
b = 10.3818 (14) ŵ = 0.80 mm1
c = 23.253 (2) ÅT = 293 K
V = 2397.5 (6) Å3Rectangle, yellow
Z = 80.20 × 0.15 × 0.10 mm
F(000) = 1008
Data collection top
Enraf-Nonius CAD-4
diffractometer
Rint = 0.000
Radiation source: fine-focus sealed tubeθmax = 69.8°, θmin = 3.8°
Graphite monochromatorh = 012
ω scansk = 012
2264 measured reflectionsl = 028
2264 independent reflections3 standard reflections every 60 min
1829 reflections with I > 2σ(I) intensity decay: 1%
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.044H-atom parameters constrained
wR(F2) = 0.176Calculated w = 1/[σ2(Fo2) + (0.1P)2]
where P = (Fo2 + 2Fc2)/3
S = 1.31(Δ/σ)max = 0.003
2264 reflectionsΔρmax = 0.20 e Å3
157 parametersΔρmin = 0.14 e Å3
0 restraintsExtinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0075 (10)
Crystal data top
C13H16O4V = 2397.5 (6) Å3
Mr = 236.26Z = 8
Orthorhombic, PbcaCu Kα radiation
a = 9.9313 (18) ŵ = 0.80 mm1
b = 10.3818 (14) ÅT = 293 K
c = 23.253 (2) Å0.20 × 0.15 × 0.10 mm
Data collection top
Enraf-Nonius CAD-4
diffractometer
Rint = 0.000
2264 measured reflections3 standard reflections every 60 min
2264 independent reflections intensity decay: 1%
1829 reflections with I > 2σ(I)
Refinement top
R[F2 > 2σ(F2)] = 0.0440 restraints
wR(F2) = 0.176H-atom parameters constrained
S = 1.31Δρmax = 0.20 e Å3
2264 reflectionsΔρmin = 0.14 e Å3
157 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.01461 (15)0.37135 (13)0.07381 (7)0.0597 (5)
O20.10450 (18)0.29611 (15)0.17239 (7)0.0684 (5)
H20.06220.31720.14360.103*
O30.21031 (16)0.01946 (14)0.04335 (7)0.0616 (5)
H30.18280.03550.07580.092*
C10.11522 (17)0.18421 (17)0.06350 (8)0.0422 (5)
O40.11738 (17)0.09725 (15)0.14432 (7)0.0661 (5)
C1'0.02610 (18)0.10732 (18)0.16172 (8)0.0473 (5)
C6'0.03227 (19)0.0280 (2)0.16961 (8)0.0510 (5)
C60.16119 (17)0.09093 (18)0.02628 (8)0.0459 (5)
C20.04387 (19)0.29085 (17)0.04107 (9)0.0466 (5)
C70.13556 (18)0.17381 (19)0.12765 (8)0.0472 (5)
H7A0.14630.26020.14290.057*
H7B0.21940.12830.13440.057*
C2'0.0813 (2)0.1751 (2)0.18380 (9)0.0536 (5)
C30.0297 (3)0.3098 (2)0.02241 (9)0.0591 (6)
H3A0.05510.27330.03510.071*
H3B0.02840.40130.03090.071*
C40.1442 (2)0.2468 (2)0.05494 (9)0.0586 (6)
H4A0.12740.25250.09600.070*
H4B0.22770.29170.04670.070*
C50.1575 (2)0.1072 (2)0.03767 (9)0.0551 (5)
H5A0.23940.07200.05410.066*
H5B0.08200.05900.05310.066*
C4'0.1281 (3)0.0052 (3)0.25192 (11)0.0794 (8)
H4'10.20010.04860.27240.095*
H4'20.05910.01820.27950.095*
C5'0.0699 (3)0.0941 (2)0.20758 (10)0.0691 (7)
H5'10.14210.12780.18380.083*
H5'20.02730.16640.22680.083*
C3'0.1823 (3)0.1149 (3)0.22326 (12)0.0769 (8)
H3'10.20780.17680.25260.092*
H3'20.26250.09300.20150.092*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0665 (9)0.0484 (8)0.0643 (9)0.0103 (7)0.0127 (7)0.0033 (6)
O20.0798 (11)0.0648 (10)0.0606 (10)0.0112 (8)0.0190 (8)0.0001 (7)
O30.0608 (9)0.0555 (9)0.0685 (9)0.0158 (7)0.0083 (7)0.0019 (7)
C10.0351 (8)0.0455 (10)0.0461 (10)0.0049 (7)0.0007 (7)0.0013 (7)
O40.0646 (9)0.0662 (10)0.0676 (10)0.0134 (7)0.0009 (8)0.0105 (7)
C1'0.0460 (10)0.0572 (11)0.0388 (9)0.0024 (8)0.0045 (8)0.0002 (8)
C6'0.0492 (11)0.0605 (12)0.0435 (10)0.0025 (9)0.0076 (8)0.0061 (8)
C60.0367 (9)0.0469 (10)0.0540 (11)0.0013 (8)0.0025 (8)0.0001 (8)
C20.0427 (9)0.0411 (10)0.0559 (11)0.0039 (7)0.0064 (8)0.0008 (8)
C70.0393 (9)0.0531 (11)0.0492 (10)0.0041 (8)0.0063 (8)0.0016 (8)
C2'0.0568 (12)0.0601 (12)0.0439 (9)0.0008 (9)0.0018 (8)0.0006 (9)
C30.0675 (14)0.0544 (12)0.0555 (12)0.0041 (10)0.0003 (10)0.0081 (9)
C40.0687 (13)0.0604 (13)0.0466 (10)0.0069 (11)0.0093 (10)0.0025 (9)
C50.0567 (12)0.0562 (12)0.0524 (11)0.0060 (9)0.0078 (9)0.0063 (9)
C4'0.0877 (18)0.0935 (19)0.0571 (13)0.0018 (14)0.0199 (13)0.0212 (13)
C5'0.0796 (16)0.0706 (15)0.0572 (13)0.0047 (12)0.0043 (12)0.0153 (11)
C3'0.0733 (16)0.0923 (18)0.0650 (14)0.0108 (14)0.0251 (13)0.0136 (13)
Geometric parameters (Å, º) top
O1—C21.271 (2)C2'—C3'1.496 (3)
O2—C2'1.304 (3)C3—C41.515 (3)
O2—H20.8200C3—H3A0.9700
O3—C61.307 (2)C3—H3B0.9700
O3—H30.8200C4—C51.510 (3)
C1—C61.377 (3)C4—H4A0.9700
C1—C21.414 (3)C4—H4B0.9700
C1—C71.509 (2)C5—H5A0.9700
O4—C6'1.256 (2)C5—H5B0.9700
C1'—C2'1.377 (3)C4'—C5'1.500 (4)
C1'—C6'1.418 (3)C4'—C3'1.513 (4)
C1'—C71.512 (3)C4'—H4'10.9700
C6'—C5'1.510 (3)C4'—H4'20.9700
C6—C51.497 (3)C5'—H5'10.9700
C2—C31.496 (3)C5'—H5'20.9700
C7—H7A0.9700C3'—H3'10.9700
C7—H7B0.9700C3'—H3'20.9700
C2'—O2—H2109.5H3A—C3—H3B108.0
C6—O3—H3109.5C3—C4—C5110.32 (17)
C6—C1—C2119.02 (17)C3—C4—H4A109.6
C6—C1—C7121.77 (17)C5—C4—H4A109.6
C2—C1—C7119.19 (17)C3—C4—H4B109.6
C2'—C1'—C6'119.44 (19)C5—C4—H4B109.6
C2'—C1'—C7121.25 (18)H4A—C4—H4B108.1
C6'—C1'—C7119.28 (18)C6—C5—C4111.99 (17)
O4—C6'—C1'122.41 (19)C6—C5—H5A109.2
O4—C6'—C5'117.72 (19)C4—C5—H5A109.2
C1'—C6'—C5'119.82 (19)C6—C5—H5B109.2
O3—C6—C1123.34 (18)C4—C5—H5B109.2
O3—C6—C5114.17 (17)H5A—C5—H5B107.9
C1—C6—C5122.48 (17)C5'—C4'—C3'110.0 (2)
O1—C2—C1121.52 (18)C5'—C4'—H4'1109.7
O1—C2—C3117.49 (18)C3'—C4'—H4'1109.7
C1—C2—C3120.94 (17)C5'—C4'—H4'2109.7
C1'—C7—C1117.02 (15)C3'—C4'—H4'2109.7
C1'—C7—H7A108.0H4'1—C4'—H4'2108.2
C1—C7—H7A108.0C6'—C5'—C4'112.4 (2)
C1'—C7—H7B108.0C6'—C5'—H5'1109.1
C1—C7—H7B108.0C4'—C5'—H5'1109.1
H7A—C7—H7B107.3C6'—C5'—H5'2109.1
O2—C2'—C1'123.59 (19)C4'—C5'—H5'2109.1
O2—C2'—C3'114.12 (19)H5'1—C5'—H5'2107.9
C1'—C2'—C3'122.3 (2)C2'—C3'—C4'112.1 (2)
C2—C3—C4111.43 (18)C2'—C3'—H3'1109.2
C2—C3—H3A109.3C4'—C3'—H3'1109.2
C4—C3—H3A109.3C2'—C3'—H3'2109.2
C2—C3—H3B109.3C4'—C3'—H3'2109.2
C4—C3—H3B109.3H3'1—C3'—H3'2107.9
C2'—C1'—C6'—O4170.41 (18)C6'—C1'—C2'—O2170.75 (18)
C7—C1'—C6'—O47.8 (3)C7—C1'—C2'—O27.4 (3)
C2'—C1'—C6'—C5'6.9 (3)C6'—C1'—C2'—C3'9.1 (3)
C7—C1'—C6'—C5'174.98 (18)C7—C1'—C2'—C3'172.8 (2)
C2—C1—C6—O3169.67 (17)O1—C2—C3—C4156.59 (18)
C7—C1—C6—O38.6 (3)C1—C2—C3—C425.9 (3)
C2—C1—C6—C59.6 (3)C2—C3—C4—C553.1 (2)
C7—C1—C6—C5172.14 (17)O3—C6—C5—C4161.36 (17)
C6—C1—C2—O1171.40 (17)C1—C6—C5—C419.3 (3)
C7—C1—C2—O16.9 (3)C3—C4—C5—C650.0 (2)
C6—C1—C2—C36.0 (3)O4—C6'—C5'—C4'157.6 (2)
C7—C1—C2—C3175.68 (17)C1'—C6'—C5'—C4'25.0 (3)
C2'—C1'—C7—C189.4 (2)C3'—C4'—C5'—C6'53.0 (3)
C6'—C1'—C7—C188.7 (2)O2—C2'—C3'—C4'159.6 (2)
C6—C1—C7—C1'90.6 (2)C1'—C2'—C3'—C4'20.6 (4)
C2—C1—C7—C1'87.7 (2)C5'—C4'—C3'—C2'50.7 (3)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C3—H3B···O1i0.972.573.522 (3)168
C5—H5A···O1ii0.972.563.371 (3)141
C5—H51···O2iii0.972.653.525 (3)150
C5—H52···O2iv0.972.713.477 (3)136
O2—H2···O10.821.782.581 (2)165
O3—H3···O40.821.842.649 (2)171
Symmetry codes: (i) x, y+1, z; (ii) x1/2, y+1/2, z; (iii) x+1/2, y1/2, z; (iv) x, y1/2, z+1/2.

Experimental details

Crystal data
Chemical formulaC13H16O4
Mr236.26
Crystal system, space groupOrthorhombic, Pbca
Temperature (K)293
a, b, c (Å)9.9313 (18), 10.3818 (14), 23.253 (2)
V3)2397.5 (6)
Z8
Radiation typeCu Kα
µ (mm1)0.80
Crystal size (mm)0.20 × 0.15 × 0.10
Data collection
DiffractometerEnraf-Nonius CAD-4
diffractometer
Absorption correction
No. of measured, independent and
observed [I > 2σ(I)] reflections
2264, 2264, 1829
Rint0.000
(sin θ/λ)max1)0.609
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.044, 0.176, 1.31
No. of reflections2264
No. of parameters157
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å3)0.20, 0.14

Computer programs: CAD-4 Software (Enraf-Nonius, 1989), CAD-4 Software, SDP (Frenz, 1978), SHELXS97 (Sheldrick, 1990), SHELXL97 (Sheldrick, 1997), SHELXL97 and PARST (Nardelli, 1995).

Selected geometric parameters (Å, º) top
O1—C21.271 (2)O3—C61.307 (2)
O2—C2'1.304 (3)O4—C6'1.256 (2)
O4—C6'—C1'122.41 (19)O1—C2—C1121.52 (18)
O4—C6'—C5'117.72 (19)O1—C2—C3117.49 (18)
O3—C6—C1123.34 (18)O2—C2'—C1'123.59 (19)
O3—C6—C5114.17 (17)O2—C2'—C3'114.12 (19)
C2'—C1'—C6'—O4170.41 (18)C7—C1'—C2'—O27.4 (3)
C7—C1'—C6'—O47.8 (3)O1—C2—C3—C4156.59 (18)
C2—C1—C6—O3169.67 (17)C1—C2—C3—C425.9 (3)
C7—C1—C6—O38.6 (3)O3—C6—C5—C4161.36 (17)
C6—C1—C2—O1171.40 (17)O4—C6'—C5'—C4'157.6 (2)
C7—C1—C2—O16.9 (3)O2—C2'—C3'—C4'159.6 (2)
C6'—C1'—C2'—O2170.75 (18)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C3—H3B···O1i0.972.573.522 (3)168
C5—H5A···O1ii0.972.563.371 (3)141
C5'—H5'1···O2iii0.972.653.525 (3)150
C5'—H5'2···O2iv0.972.713.477 (3)136
O2—H2···O10.821.782.581 (2)165
O3—H3···O40.821.842.649 (2)171
Symmetry codes: (i) x, y+1, z; (ii) x1/2, y+1/2, z; (iii) x+1/2, y1/2, z; (iv) x, y1/2, z+1/2.
 

Subscribe to Acta Crystallographica Section C: Structural Chemistry

The full text of this article is available to subscribers to the journal.

If you have already registered and are using a computer listed in your registration details, please email support@iucr.org for assistance.

Buy online

You may purchase this article in PDF and/or HTML formats. For purchasers in the European Community who do not have a VAT number, VAT will be added at the local rate. Payments to the IUCr are handled by WorldPay, who will accept payment by credit card in several currencies. To purchase the article, please complete the form below (fields marked * are required), and then click on `Continue'.
E-mail address* 
Repeat e-mail address* 
(for error checking) 

Format*   PDF (US $40)
   HTML (US $40)
   PDF+HTML (US $50)
In order for VAT to be shown for your country javascript needs to be enabled.

VAT number 
(non-UK EC countries only) 
Country* 
 

Terms and conditions of use
Contact us

Follow Acta Cryst. C
Sign up for e-alerts
Follow Acta Cryst. on Twitter
Follow us on facebook
Sign up for RSS feeds