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It was planned to sythesize morpholinedi­thio­monometa­phospho­ryl morpholinide by reaction of pyridine­di­thio­monometa­phospho­ryl chloride with 4-(trimethylsilyl)morpholine. But due to traces of water the title compound was formed as by-product, (I).

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S010827019901639X/qa0196sup1.cif
Contains datablocks I, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S010827019901639X/qa0196Isup2.hkl
Contains datablock I

CCDC reference: 140869

Experimental top

A solution of 4-(trimethylsilyl)morpholine in benzene was slowly dropped to a suspension of pyridinedithiomonometaphosphoryl chloride in benzene. After one hour stirring at 333 K, the solid product was filtrated and washed with benzene. For the studied crystal of a ΔF2 based absorption correction was carried out. The calculation was done with ABSCOR (Stoe & Cie, 1997), a modification of DIFABS (Walker & Stuart, 1983). In contrary of DIFABS, ABSCOR loads F2 values instead of F values.

Computing details top

Data collection: IPDS2.75 (Stoe & Cie, 1997); cell refinement: IPDS2.75 (Stoe & Cie, 1997); data reduction: IPDS2.75 (Stoe & Cie, 1997); program(s) used to solve structure: SHELXS86 (Sheldrick, 1990); program(s) used to refine structure: SHELXL93 (Sheldrick, 1993); molecular graphics: XSTEP (Stoe & Cie, 1997); software used to prepare material for publication: SHELXL93 (Sheldrick, 1993).

Morpholinium-dimorpholidodithiophosphate top
Crystal data top
C4H10NO+·C8H16N2O2PS2F(000) = 380
Mr = 355.45Dx = 1.389 Mg m3
Triclinic, P1Melting point: 353 (decomposition) K
a = 7.355 (2) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.291 (3) ÅCell parameters from 4803 reflections
c = 14.374 (5) Åθ = 2.6–25.0°
α = 95.78 (4)°µ = 0.42 mm1
β = 98.68 (4)°T = 180 K
γ = 98.51 (4)°Prism, colorless
V = 850.1 (5) Å30.41 × 0.20 × 0.19 mm
Z = 2
Data collection top
Stoe IPDS
diffractometer
2881 independent reflections
Radiation source: fine-focus sealed X-ray tube1833 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.101
Detector resolution: 6.667 pixels mm-1θmax = 25.2°, θmin = 2.5°
ϕ–oscill., ϕ–incr. = 1.5°; 147 exposures scansh = 88
Absorption correction: part of the refinement model (ΔF)
see Experimental
k = 1010
Tmin = 0.847, Tmax = 0.925l = 1717
6844 measured reflections
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.057H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.137Calculated w = 1/[σ2(Fo2) + (0.0823P)2]
where P = (Fo2 + 2Fc2)/3
S = 0.90(Δ/σ)max = 0.012
2876 reflectionsΔρmax = 0.54 e Å3
197 parametersΔρmin = 0.46 e Å3
0 restraintsExtinction correction: SHELXL93, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0033 (29)
Crystal data top
C4H10NO+·C8H16N2O2PS2γ = 98.51 (4)°
Mr = 355.45V = 850.1 (5) Å3
Triclinic, P1Z = 2
a = 7.355 (2) ÅMo Kα radiation
b = 8.291 (3) ŵ = 0.42 mm1
c = 14.374 (5) ÅT = 180 K
α = 95.78 (4)°0.41 × 0.20 × 0.19 mm
β = 98.68 (4)°
Data collection top
Stoe IPDS
diffractometer
2881 independent reflections
Absorption correction: part of the refinement model (ΔF)
see Experimental
1833 reflections with I > 2σ(I)
Tmin = 0.847, Tmax = 0.925Rint = 0.101
6844 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0570 restraints
wR(F2) = 0.137H atoms treated by a mixture of independent and constrained refinement
S = 0.90Δρmax = 0.54 e Å3
2876 reflectionsΔρmin = 0.46 e Å3
197 parameters
Special details top

Experimental. During data collection the crystal was in cold N2 gas of the Cryostream Cooler (Oxford Cryosystems, 1992) mounted on a ϕ-axis diffractometer supplied with an area detector.

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement on F2 for ALL reflections except for 5 with very negative F2 or flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating R-factors etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C10.3807 (6)0.7024 (6)0.0077 (3)0.0279 (11)
H1A0.4038 (6)0.7728 (6)0.0578 (3)0.031*
H1B0.3887 (6)0.5880 (6)0.0318 (3)0.031*
C20.5232 (7)0.7604 (5)0.0800 (3)0.0281 (11)
H2A0.5023 (7)0.6864 (5)0.1286 (3)0.031*
H2B0.6494 (7)0.7561 (5)0.0649 (3)0.031*
C30.3345 (7)0.9294 (6)0.1427 (3)0.0318 (12)
H3A0.3298 (7)1.0424 (6)0.1708 (3)0.035*
H3B0.3148 (7)0.8549 (6)0.1912 (3)0.035*
C40.1824 (7)0.8797 (6)0.0587 (3)0.0319 (12)
H4A0.0596 (7)0.8822 (6)0.0785 (3)0.035*
H4B0.1972 (7)0.9572 (6)0.0112 (3)0.035*
C50.1688 (7)0.2335 (6)0.2542 (3)0.0326 (12)
H5A0.1575 (7)0.1420 (6)0.2067 (3)0.036*
H5B0.2481 (7)0.3051 (6)0.2222 (3)0.036*
C60.2569 (7)0.1664 (7)0.3329 (3)0.0363 (13)
H6A0.2754 (7)0.2588 (7)0.3778 (3)0.040*
H6B0.3809 (7)0.1009 (7)0.3061 (3)0.040*
C70.0343 (7)0.1578 (6)0.4214 (3)0.0347 (12)
H7A0.1114 (7)0.0866 (6)0.4553 (3)0.038*
H7B0.0215 (7)0.2505 (6)0.4677 (3)0.038*
C80.1300 (7)0.2234 (6)0.3434 (3)0.0322 (12)
H8A0.2540 (7)0.2879 (6)0.3711 (3)0.035*
H8B0.1481 (7)0.1307 (6)0.2985 (3)0.035*
C90.4807 (6)0.5411 (6)0.3253 (3)0.0283 (11)
H9A0.5144 (6)0.4922 (6)0.2658 (3)0.031*
H9B0.4887 (6)0.4611 (6)0.3718 (3)0.031*
C100.6138 (7)0.6978 (7)0.3637 (3)0.0379 (13)
H10A0.7418 (7)0.6731 (7)0.3790 (3)0.042*
H10B0.6131 (7)0.7739 (7)0.3148 (3)0.042*
C110.3818 (7)0.8179 (6)0.4260 (3)0.0322 (12)
H11A0.3818 (7)0.8940 (6)0.3772 (3)0.035*
H11B0.3492 (7)0.8750 (6)0.4836 (3)0.035*
C120.2385 (7)0.6657 (6)0.3899 (3)0.0284 (11)
H12A0.2312 (7)0.5935 (6)0.4405 (3)0.031*
H12B0.1143 (7)0.6972 (6)0.3724 (3)0.031*
N10.1929 (6)0.7106 (5)0.0165 (3)0.0267 (10)
H1NA0.107 (7)0.681 (6)0.034 (4)0.029*
H2NA0.166 (7)0.637 (6)0.054 (3)0.029*
N20.0156 (5)0.3277 (4)0.2929 (2)0.0243 (9)
N30.2900 (5)0.5767 (4)0.3067 (2)0.0209 (8)
O10.5127 (5)0.9238 (4)0.1169 (2)0.0314 (8)
O20.1455 (5)0.0657 (4)0.3828 (2)0.0416 (10)
O30.5615 (5)0.7751 (4)0.4478 (2)0.0409 (10)
P10.1177 (2)0.46109 (13)0.22869 (7)0.0186 (3)
S10.2258 (2)0.34968 (14)0.12451 (7)0.0250 (3)
S20.0695 (2)0.59723 (14)0.18240 (8)0.0261 (3)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.025 (3)0.028 (3)0.028 (2)0.003 (2)0.000 (2)0.001 (2)
C20.023 (3)0.025 (3)0.031 (2)0.000 (2)0.005 (2)0.000 (2)
C30.038 (3)0.025 (3)0.029 (3)0.004 (2)0.000 (2)0.003 (2)
C40.027 (3)0.030 (3)0.039 (3)0.009 (2)0.001 (2)0.008 (2)
C50.027 (3)0.037 (3)0.025 (2)0.013 (2)0.005 (2)0.006 (2)
C60.022 (3)0.049 (3)0.034 (3)0.009 (2)0.001 (2)0.017 (2)
C70.028 (3)0.036 (3)0.036 (3)0.005 (2)0.003 (2)0.016 (2)
C80.020 (3)0.038 (3)0.042 (3)0.002 (2)0.003 (2)0.021 (2)
C90.019 (3)0.033 (3)0.030 (2)0.002 (2)0.001 (2)0.002 (2)
C100.017 (3)0.057 (4)0.032 (3)0.011 (2)0.001 (2)0.001 (2)
C110.031 (3)0.030 (3)0.031 (3)0.006 (2)0.005 (2)0.004 (2)
C120.026 (3)0.033 (3)0.021 (2)0.004 (2)0.001 (2)0.004 (2)
N10.023 (2)0.026 (2)0.025 (2)0.007 (2)0.006 (2)0.009 (2)
N20.015 (2)0.030 (2)0.024 (2)0.006 (2)0.004 (2)0.008 (2)
N30.015 (2)0.025 (2)0.019 (2)0.0020 (14)0.0016 (15)0.0022 (15)
O10.030 (2)0.024 (2)0.032 (2)0.0073 (14)0.0051 (15)0.0011 (14)
O20.038 (2)0.040 (2)0.039 (2)0.016 (2)0.003 (2)0.019 (2)
O30.031 (2)0.047 (2)0.032 (2)0.015 (2)0.003 (2)0.009 (2)
P10.0179 (6)0.0185 (6)0.0162 (5)0.0039 (4)0.0013 (4)0.0036 (4)
S10.0257 (7)0.0255 (6)0.0214 (6)0.0001 (5)0.0016 (5)0.0008 (4)
S20.0234 (7)0.0262 (6)0.0275 (6)0.0035 (5)0.0016 (5)0.0076 (5)
Geometric parameters (Å, º) top
C1—N11.484 (6)C7—H7B0.99
C1—C21.500 (6)C8—N21.463 (6)
C1—H1A0.99C8—H8A0.99
C1—H1B0.99C8—H8B0.99
C2—O11.421 (5)C9—N31.466 (6)
C2—H2A0.99C9—C101.505 (6)
C2—H2B0.99C9—H9A0.99
C3—O11.420 (6)C9—H9B0.99
C3—C41.495 (6)C10—O31.441 (6)
C3—H3A0.99C10—H10A0.99
C3—H3B0.99C10—H10B0.99
C4—N11.487 (6)C11—O31.417 (6)
C4—H4A0.99C11—C121.511 (6)
C4—H4B0.99C11—H11A0.99
C5—N21.459 (5)C11—H11B0.99
C5—C61.500 (6)C12—N31.470 (6)
C5—H5A0.99C12—H12A0.99
C5—H5B0.99C12—H12B0.99
C6—O21.424 (6)N1—H1NA0.87 (5)
C6—H6A0.99N1—H2NA0.88 (5)
C6—H6B0.99N2—P11.676 (4)
C7—O21.426 (5)N3—P11.667 (3)
C7—C81.516 (7)P1—S21.987 (2)
C7—H7A0.99P1—S12.006 (2)
N1—C1—C2108.5 (4)H8A—C8—H8B108.2
N1—C1—H1A110.0 (2)N3—C9—C10109.5 (4)
C2—C1—H1A110.0 (3)N3—C9—H9A109.8 (2)
N1—C1—H1B110.0 (2)C10—C9—H9A109.8 (3)
C2—C1—H1B110.0 (3)N3—C9—H9B109.8 (2)
H1A—C1—H1B108.4C10—C9—H9B109.8 (3)
O1—C2—C1111.1 (4)H9A—C9—H9B108.2
O1—C2—H2A109.4 (2)O3—C10—C9110.6 (4)
C1—C2—H2A109.4 (3)O3—C10—H10A109.5 (3)
O1—C2—H2B109.4 (2)C9—C10—H10A109.5 (3)
C1—C2—H2B109.4 (3)O3—C10—H10B109.5 (3)
H2A—C2—H2B108.0C9—C10—H10B109.5 (3)
O1—C3—C4111.3 (4)H10A—C10—H10B108.1
O1—C3—H3A109.4 (2)O3—C11—C12110.3 (4)
C4—C3—H3A109.4 (3)O3—C11—H11A109.6 (2)
O1—C3—H3B109.4 (2)C12—C11—H11A109.6 (3)
C4—C3—H3B109.4 (3)O3—C11—H11B109.6 (2)
H3A—C3—H3B108.0C12—C11—H11B109.6 (3)
N1—C4—C3108.7 (4)H11A—C11—H11B108.1
N1—C4—H4A110.0 (3)N3—C12—C11109.9 (4)
C3—C4—H4A110.0 (3)N3—C12—H12A109.7 (2)
N1—C4—H4B110.0 (3)C11—C12—H12A109.7 (3)
C3—C4—H4B110.0 (3)N3—C12—H12B109.7 (2)
H4A—C4—H4B108.3C11—C12—H12B109.7 (3)
N2—C5—C6109.5 (3)H12A—C12—H12B108.2
N2—C5—H5A109.8 (3)C1—N1—C4110.6 (4)
C6—C5—H5A109.8 (3)C1—N1—H1NA110 (3)
N2—C5—H5B109.8 (2)C4—N1—H1NA110 (3)
C6—C5—H5B109.8 (3)C1—N1—H2NA110 (3)
H5A—C5—H5B108.2C4—N1—H2NA112 (3)
O2—C6—C5112.0 (4)H1NA—N1—H2NA104 (4)
O2—C6—H6A109.2 (3)C5—N2—C8109.6 (4)
C5—C6—H6A109.2 (3)C5—N2—P1119.3 (3)
O2—C6—H6B109.2 (2)C8—N2—P1118.3 (3)
C5—C6—H6B109.2 (2)C9—N3—C12112.4 (3)
H6A—C6—H6B107.9C9—N3—P1124.1 (3)
O2—C7—C8110.5 (4)C12—N3—P1117.2 (3)
O2—C7—H7A109.5 (2)C3—O1—C2109.7 (3)
C8—C7—H7A109.5 (3)C6—O2—C7110.0 (3)
O2—C7—H7B109.5 (3)C11—O3—C10110.2 (4)
C8—C7—H7B109.5 (3)N3—P1—N2104.0 (2)
H7A—C7—H7B108.1N3—P1—S2109.93 (15)
N2—C8—C7109.6 (4)N2—P1—S2107.3 (2)
N2—C8—H8A109.8 (2)N3—P1—S1109.2 (2)
C7—C8—H8A109.8 (2)N2—P1—S1112.6 (2)
N2—C8—H8B109.8 (3)S2—P1—S1113.43 (7)
C7—C8—H8B109.8 (3)
N1—C1—C2—O158.8 (5)C1—C2—O1—C361.6 (5)
O1—C3—C4—N158.4 (5)C5—C6—O2—C758.5 (5)
N2—C5—C6—O257.9 (6)C8—C7—O2—C658.5 (6)
O2—C7—C8—N258.9 (5)C12—C11—O3—C1061.5 (5)
N3—C9—C10—O356.6 (5)C9—C10—O3—C1161.8 (5)
O3—C11—C12—N357.0 (5)C9—N3—P1—N291.7 (4)
C2—C1—N1—C456.0 (5)C12—N3—P1—N258.2 (4)
C3—C4—N1—C155.9 (5)C9—N3—P1—S2153.7 (3)
C6—C5—N2—C857.2 (6)C12—N3—P1—S256.4 (3)
C6—C5—N2—P1161.9 (4)C9—N3—P1—S128.7 (4)
C7—C8—N2—C558.0 (5)C12—N3—P1—S1178.6 (3)
C7—C8—N2—P1160.6 (3)C5—N2—P1—N3164.8 (4)
C10—C9—N3—C1253.3 (5)C8—N2—P1—N357.5 (4)
C10—C9—N3—P1155.5 (3)C5—N2—P1—S248.4 (4)
C11—C12—N3—C953.5 (5)C8—N2—P1—S2174.0 (3)
C11—C12—N3—P1153.2 (3)C5—N2—P1—S177.1 (4)
C4—C3—O1—C261.4 (5)C8—N2—P1—S160.5 (4)

Experimental details

Crystal data
Chemical formulaC4H10NO+·C8H16N2O2PS2
Mr355.45
Crystal system, space groupTriclinic, P1
Temperature (K)180
a, b, c (Å)7.355 (2), 8.291 (3), 14.374 (5)
α, β, γ (°)95.78 (4), 98.68 (4), 98.51 (4)
V3)850.1 (5)
Z2
Radiation typeMo Kα
µ (mm1)0.42
Crystal size (mm)0.41 × 0.20 × 0.19
Data collection
DiffractometerStoe IPDS
diffractometer
Absorption correctionPart of the refinement model (ΔF)
see Experimental
Tmin, Tmax0.847, 0.925
No. of measured, independent and
observed [I > 2σ(I)] reflections
6844, 2881, 1833
Rint0.101
(sin θ/λ)max1)0.600
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.057, 0.137, 0.90
No. of reflections2876
No. of parameters197
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.54, 0.46

Computer programs: IPDS2.75 (Stoe & Cie, 1997), SHELXS86 (Sheldrick, 1990), SHELXL93 (Sheldrick, 1993), XSTEP (Stoe & Cie, 1997).

 

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