The bisphosphoramidate (C6H5O)2P(O)NH(CH2)4NHP(O)(OC6H5)2 crystallizes in two polymorphs, one (ndl) with a needle habit from tetrahydrofuran (THF)/ethanol and another (prm) which forms prisms from H2O/ethanol. The molecules in the two forms differ from each other in some torsion angles and the orientation of the diaminobutane bridge, although the differences between the similar bond lengths are not significant for the two polymorphs. The geometry optimizations at the B3LYP/6-31+G* level for isolated molecules show that the two conformers which exist in the crystalline state also represent local gas-phase energy minima. The decrease in the N—H distance from the optimized to the crystal structures has been described in terms of the decrease in electron density (ρ) at the bond-critical point (b.c.p.) of the N—H bond path when the molecule participates in hydrogen bonding, comparing the results of atoms-in-molecules (AIM) and natural bond orbital (NBO) analyses for fully optimized structures ndl and prm with their hydrogen-bonded model clusters.
Supporting information
For both compounds, data collection: SMART (Bruker, 1998b); cell refinement: SAINTPlus (Bruker, 1998a); data reduction: SAINTPlus (Bruker, 1998a); program(s) used to solve structure: SHELXTL ver. 5.1 (Sheldrick, 1998b); program(s) used to refine structure: SHELXTL ver. 5.1 (Sheldrick, 1998b); molecular graphics: SHELXTL ver. 5.1 (Sheldrick, 1998b); software used to prepare material for publication: SHELXTL ver. 5.1 (Sheldrick, 1998b).
Crystal data top
C28H30N2O6P2 | F(000) = 580 |
Mr = 552.48 | Dx = 1.389 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 3214 reflections |
a = 15.7039 (19) Å | θ = 3–30° |
b = 5.3299 (7) Å | µ = 0.21 mm−1 |
c = 16.932 (2) Å | T = 120 K |
β = 111.260 (2)° | Needle, colorless |
V = 1320.8 (3) Å3 | 0.35 × 0.05 × 0.04 mm |
Z = 2 | |
Data collection top
Bruker SMART 1000 CCD area detector diffractometer | 3515 independent reflections |
Radiation source: fine-focus sealed tube | 2097 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.056 |
phi and ω scans | θmax = 29.0°, θmin = 1.4° |
Absorption correction: multi-scan SADABS (Sheldrick, 1998a) | h = −21→21 |
Tmin = 0.927, Tmax = 0.996 | k = −7→7 |
13832 measured reflections | l = −23→22 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.054 | Hydrogen site location: mixed |
wR(F2) = 0.131 | H-atom parameters constrained |
S = 1.00 | w = 1/[σ2(Fo2) + (0.051P)2 + 0.530P] where P = (Fo2 + 2Fc2)/3 |
3515 reflections | (Δ/σ)max < 0.001 |
175 parameters | Δρmax = 0.62 e Å−3 |
0 restraints | Δρmin = −0.39 e Å−3 |
Crystal data top
C28H30N2O6P2 | V = 1320.8 (3) Å3 |
Mr = 552.48 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 15.7039 (19) Å | µ = 0.21 mm−1 |
b = 5.3299 (7) Å | T = 120 K |
c = 16.932 (2) Å | 0.35 × 0.05 × 0.04 mm |
β = 111.260 (2)° | |
Data collection top
Bruker SMART 1000 CCD area detector diffractometer | 3515 independent reflections |
Absorption correction: multi-scan SADABS (Sheldrick, 1998a) | 2097 reflections with I > 2σ(I) |
Tmin = 0.927, Tmax = 0.996 | Rint = 0.056 |
13832 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.054 | 0 restraints |
wR(F2) = 0.131 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.62 e Å−3 |
3515 reflections | Δρmin = −0.39 e Å−3 |
175 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
P1 | 0.28988 (4) | 0.13924 (12) | 0.38934 (4) | 0.01735 (17) | |
O1 | 0.30395 (10) | −0.1040 (3) | 0.35511 (9) | 0.0215 (4) | |
O2 | 0.18713 (10) | 0.2368 (3) | 0.35672 (9) | 0.0195 (4) | |
O3 | 0.31208 (10) | 0.1347 (3) | 0.48844 (9) | 0.0200 (4) | |
N1 | 0.34758 (12) | 0.3679 (4) | 0.37189 (11) | 0.0175 (4) | |
H1N | 0.3298 | 0.5262 | 0.3748 | 0.021* | |
C1 | 0.13508 (14) | 0.2380 (4) | 0.26898 (13) | 0.0173 (5) | |
C2 | 0.07200 (15) | 0.0486 (4) | 0.23628 (14) | 0.0199 (5) | |
H2A | 0.0652 | −0.0819 | 0.2718 | 0.024* | |
C3 | 0.01882 (15) | 0.0529 (5) | 0.15065 (15) | 0.0227 (5) | |
H3A | −0.0249 | −0.0759 | 0.1272 | 0.027* | |
C4 | 0.02873 (16) | 0.2422 (5) | 0.09926 (15) | 0.0246 (5) | |
H4A | −0.0077 | 0.2434 | 0.0406 | 0.030* | |
C5 | 0.09207 (16) | 0.4309 (5) | 0.13348 (15) | 0.0249 (6) | |
H5A | 0.0992 | 0.5606 | 0.0979 | 0.030* | |
C6 | 0.14518 (15) | 0.4323 (4) | 0.21929 (14) | 0.0207 (5) | |
H6A | 0.1875 | 0.5640 | 0.2432 | 0.025* | |
C7 | 0.29168 (15) | −0.0591 (4) | 0.53449 (14) | 0.0187 (5) | |
C8 | 0.22783 (15) | −0.2423 (5) | 0.49831 (15) | 0.0226 (5) | |
H8A | 0.1939 | −0.2418 | 0.4391 | 0.027* | |
C9 | 0.21378 (16) | −0.4287 (5) | 0.54987 (16) | 0.0262 (6) | |
H9A | 0.1706 | −0.5580 | 0.5254 | 0.031* | |
C10 | 0.26169 (17) | −0.4277 (5) | 0.63592 (16) | 0.0288 (6) | |
H10A | 0.2513 | −0.5549 | 0.6707 | 0.035* | |
C11 | 0.32526 (17) | −0.2397 (5) | 0.67165 (15) | 0.0285 (6) | |
H11A | 0.3584 | −0.2387 | 0.7310 | 0.034* | |
C12 | 0.34072 (16) | −0.0539 (5) | 0.62144 (14) | 0.0235 (5) | |
H12A | 0.3841 | 0.0750 | 0.6458 | 0.028* | |
C13 | 0.44575 (14) | 0.3477 (5) | 0.38800 (14) | 0.0205 (5) | |
H13A | 0.4624 | 0.4778 | 0.3544 | 0.025* | 0.80 |
H13B | 0.4577 | 0.1821 | 0.3676 | 0.025* | 0.80 |
H13C | 0.4555 | 0.3915 | 0.3369 | 0.025* | 0.20 |
H13D | 0.4645 | 0.1764 | 0.4012 | 0.025* | 0.20 |
C14 | 0.50715 (19) | 0.3765 (6) | 0.48031 (19) | 0.0225 (6) | 0.80 |
H14A | 0.5717 | 0.3659 | 0.4848 | 0.027* | 0.80 |
H14B | 0.4956 | 0.2354 | 0.5131 | 0.027* | 0.80 |
C14' | 0.5038 (8) | 0.519 (3) | 0.4577 (8) | 0.0225 (6) | 0.20 |
H14C | 0.5686 | 0.4955 | 0.4641 | 0.027* | 0.20 |
H14D | 0.4871 | 0.6946 | 0.4399 | 0.027* | 0.20 |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
P1 | 0.0174 (3) | 0.0170 (3) | 0.0158 (3) | 0.0010 (3) | 0.0037 (2) | 0.0001 (3) |
O1 | 0.0244 (8) | 0.0197 (9) | 0.0198 (8) | 0.0022 (7) | 0.0072 (7) | −0.0008 (7) |
O2 | 0.0167 (8) | 0.0230 (9) | 0.0162 (8) | 0.0016 (7) | 0.0027 (6) | 0.0004 (7) |
O3 | 0.0235 (8) | 0.0186 (9) | 0.0152 (8) | −0.0016 (7) | 0.0037 (6) | 0.0011 (7) |
N1 | 0.0170 (9) | 0.0147 (10) | 0.0186 (9) | 0.0005 (8) | 0.0039 (8) | 0.0002 (8) |
C1 | 0.0143 (10) | 0.0208 (12) | 0.0165 (11) | 0.0040 (9) | 0.0053 (9) | 0.0001 (9) |
C2 | 0.0186 (11) | 0.0188 (12) | 0.0225 (12) | 0.0005 (10) | 0.0077 (10) | 0.0033 (10) |
C3 | 0.0169 (11) | 0.0222 (13) | 0.0269 (13) | −0.0022 (10) | 0.0053 (10) | −0.0036 (10) |
C4 | 0.0207 (12) | 0.0325 (15) | 0.0187 (12) | 0.0036 (11) | 0.0049 (10) | 0.0016 (11) |
C5 | 0.0237 (12) | 0.0250 (14) | 0.0242 (13) | 0.0024 (10) | 0.0066 (10) | 0.0075 (11) |
C6 | 0.0183 (11) | 0.0188 (13) | 0.0231 (12) | 0.0010 (10) | 0.0050 (10) | −0.0008 (10) |
C7 | 0.0211 (11) | 0.0184 (12) | 0.0166 (11) | 0.0042 (10) | 0.0071 (9) | 0.0023 (9) |
C8 | 0.0232 (12) | 0.0245 (14) | 0.0210 (12) | 0.0016 (11) | 0.0091 (10) | 0.0007 (10) |
C9 | 0.0259 (13) | 0.0270 (15) | 0.0306 (14) | −0.0004 (11) | 0.0161 (11) | 0.0006 (11) |
C10 | 0.0368 (15) | 0.0269 (15) | 0.0294 (14) | 0.0055 (12) | 0.0199 (12) | 0.0076 (11) |
C11 | 0.0352 (14) | 0.0332 (15) | 0.0182 (12) | 0.0073 (13) | 0.0112 (11) | 0.0047 (11) |
C12 | 0.0243 (12) | 0.0264 (14) | 0.0186 (12) | 0.0025 (10) | 0.0061 (10) | −0.0015 (10) |
C13 | 0.0143 (11) | 0.0229 (13) | 0.0238 (12) | 0.0003 (10) | 0.0063 (9) | −0.0016 (10) |
C14 | 0.0166 (12) | 0.0225 (18) | 0.0242 (16) | 0.0032 (14) | 0.0023 (12) | 0.0004 (14) |
C14' | 0.0166 (12) | 0.0225 (18) | 0.0242 (16) | 0.0032 (14) | 0.0023 (12) | 0.0004 (14) |
Geometric parameters (Å, º) top
P1—O1 | 1.4690 (17) | C8—C9 | 1.392 (3) |
P1—O3 | 1.5854 (15) | C8—H8A | 0.9500 |
P1—O2 | 1.5914 (15) | C9—C10 | 1.376 (3) |
P1—N1 | 1.6084 (19) | C9—H9A | 0.9500 |
O2—C1 | 1.412 (2) | C10—C11 | 1.389 (4) |
O3—C7 | 1.400 (3) | C10—H10A | 0.9500 |
N1—C13 | 1.469 (3) | C11—C12 | 1.383 (3) |
N1—H1N | 0.8961 | C11—H11A | 0.9500 |
C1—C6 | 1.379 (3) | C12—H12A | 0.9500 |
C1—C2 | 1.381 (3) | C13—C14' | 1.509 (13) |
C2—C3 | 1.386 (3) | C13—C14 | 1.518 (4) |
C2—H2A | 0.9500 | C13—H13A | 0.9900 |
C3—C4 | 1.377 (3) | C13—H13B | 0.9900 |
C3—H3A | 0.9500 | C13—H13C | 0.9600 |
C4—C5 | 1.385 (3) | C13—H13D | 0.9600 |
C4—H4A | 0.9500 | C14—C14i | 1.529 (6) |
C5—C6 | 1.389 (3) | C14—H14A | 0.9900 |
C5—H5A | 0.9500 | C14—H14B | 0.9900 |
C6—H6A | 0.9500 | C14'—C14'i | 1.49 (3) |
C7—C8 | 1.375 (3) | C14'—H14C | 0.9900 |
C7—C12 | 1.393 (3) | C14'—H14D | 0.9900 |
| | | |
O1—P1—O3 | 113.42 (9) | C9—C10—H10A | 120.2 |
O1—P1—O2 | 115.46 (9) | C11—C10—H10A | 120.2 |
O3—P1—O2 | 100.28 (8) | C12—C11—C10 | 120.5 (2) |
O1—P1—N1 | 114.88 (9) | C12—C11—H11A | 119.8 |
O3—P1—N1 | 106.47 (9) | C10—C11—H11A | 119.8 |
O2—P1—N1 | 104.87 (9) | C11—C12—C7 | 118.9 (2) |
C1—O2—P1 | 119.60 (13) | C11—C12—H12A | 120.6 |
C7—O3—P1 | 126.44 (14) | C7—C12—H12A | 120.6 |
C13—N1—P1 | 122.24 (16) | N1—C13—C14' | 113.4 (5) |
C13—N1—H1N | 112.7 | N1—C13—C14 | 114.57 (19) |
P1—N1—H1N | 119.7 | N1—C13—H13A | 108.6 |
C6—C1—C2 | 121.9 (2) | C14'—C13—H13A | 79.4 |
C6—C1—O2 | 119.6 (2) | C14—C13—H13A | 108.6 |
C2—C1—O2 | 118.4 (2) | N1—C13—H13B | 108.6 |
C1—C2—C3 | 118.7 (2) | C14'—C13—H13B | 132.4 |
C1—C2—H2A | 120.7 | C14—C13—H13B | 108.6 |
C3—C2—H2A | 120.7 | H13A—C13—H13B | 107.6 |
C4—C3—C2 | 120.6 (2) | N1—C13—H13C | 108.3 |
C4—C3—H3A | 119.7 | C14'—C13—H13C | 108.0 |
C2—C3—H3A | 119.7 | C14—C13—H13C | 130.8 |
C3—C4—C5 | 119.7 (2) | H13B—C13—H13C | 77.9 |
C3—C4—H4A | 120.1 | N1—C13—H13D | 109.0 |
C5—C4—H4A | 120.1 | C14'—C13—H13D | 110.2 |
C4—C5—C6 | 120.6 (2) | C14—C13—H13D | 80.2 |
C4—C5—H5A | 119.7 | H13A—C13—H13D | 132.6 |
C6—C5—H5A | 119.7 | H13C—C13—H13D | 107.8 |
C1—C6—C5 | 118.4 (2) | C13—C14—C14i | 113.4 (3) |
C1—C6—H6A | 120.8 | C13—C14—H14A | 108.9 |
C5—C6—H6A | 120.8 | C14i—C14—H14A | 108.9 |
C8—C7—C12 | 121.3 (2) | C13—C14—H14B | 108.9 |
C8—C7—O3 | 123.6 (2) | C14i—C14—H14B | 108.9 |
C12—C7—O3 | 115.1 (2) | H14A—C14—H14B | 107.7 |
C7—C8—C9 | 118.9 (2) | C14'i—C14'—C13 | 115.6 (13) |
C7—C8—H8A | 120.5 | C14'i—C14'—H14C | 108.4 |
C9—C8—H8A | 120.5 | C13—C14'—H14C | 108.4 |
C10—C9—C8 | 120.7 (2) | C14'i—C14'—H14D | 108.4 |
C10—C9—H9A | 119.6 | C13—C14'—H14D | 108.4 |
C8—C9—H9A | 119.6 | H14C—C14'—H14D | 107.4 |
C9—C10—C11 | 119.7 (2) | | |
| | | |
O1—P1—O2—C1 | −49.42 (18) | C4—C5—C6—C1 | 1.8 (3) |
O3—P1—O2—C1 | −171.67 (16) | P1—O3—C7—C8 | −18.7 (3) |
N1—P1—O2—C1 | 78.07 (17) | P1—O3—C7—C12 | 161.74 (16) |
O1—P1—O3—C7 | −39.5 (2) | C12—C7—C8—C9 | −1.4 (3) |
O2—P1—O3—C7 | 84.22 (18) | O3—C7—C8—C9 | 179.1 (2) |
N1—P1—O3—C7 | −166.78 (17) | C7—C8—C9—C10 | 1.2 (4) |
O1—P1—N1—C13 | −47.97 (19) | C8—C9—C10—C11 | −0.5 (4) |
O3—P1—N1—C13 | 78.47 (17) | C9—C10—C11—C12 | 0.0 (4) |
O2—P1—N1—C13 | −175.80 (15) | C10—C11—C12—C7 | −0.2 (4) |
P1—O2—C1—C6 | −81.4 (2) | C8—C7—C12—C11 | 0.9 (3) |
P1—O2—C1—C2 | 101.7 (2) | O3—C7—C12—C11 | −179.5 (2) |
C6—C1—C2—C3 | 1.3 (3) | P1—N1—C13—C14' | −114.6 (6) |
O2—C1—C2—C3 | 178.13 (19) | P1—N1—C13—C14 | −79.2 (3) |
C1—C2—C3—C4 | 0.0 (3) | N1—C13—C14—C14i | −56.7 (4) |
C2—C3—C4—C5 | −0.3 (3) | C14'—C13—C14—C14i | 38.6 (9) |
C3—C4—C5—C6 | −0.6 (4) | N1—C13—C14'—C14'i | 58.8 (16) |
C2—C1—C6—C5 | −2.1 (3) | C14—C13—C14'—C14'i | −40.6 (10) |
O2—C1—C6—C5 | −178.96 (19) | | |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O1ii | 0.90 | 2.02 | 2.887 (3) | 164 |
Symmetry code: (ii) x, y+1, z. |
Crystal data top
C28H30N2O6P2 | F(000) = 580 |
Mr = 552.48 | Dx = 1.396 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 2568 reflections |
a = 9.6437 (9) Å | θ = 3–30° |
b = 14.3801 (13) Å | µ = 0.21 mm−1 |
c = 10.3503 (9) Å | T = 120 K |
β = 113.659 (2)° | Prism, colorless |
V = 1314.7 (2) Å3 | 0.35 × 0.30 × 0.30 mm |
Z = 2 | |
Data collection top
Bruker SMART 1000 CCD area detector diffractometer | 3473 independent reflections |
Radiation source: fine-focus sealed tube | 2580 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.032 |
phi and ω scans | θmax = 29.0°, θmin = 2.4° |
Absorption correction: multi-scan SADABS (Sheldrick, 1998a) | h = −13→13 |
Tmin = 0.924, Tmax = 0.931 | k = −19→19 |
10920 measured reflections | l = −14→14 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: mixed |
wR(F2) = 0.121 | H-atom parameters constrained |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0548P)2 + 0.880P] where P = (Fo2 + 2Fc2)/3 |
3473 reflections | (Δ/σ)max = 0.001 |
172 parameters | Δρmax = 0.40 e Å−3 |
0 restraints | Δρmin = −0.43 e Å−3 |
Crystal data top
C28H30N2O6P2 | V = 1314.7 (2) Å3 |
Mr = 552.48 | Z = 2 |
Monoclinic, P21/n | Mo Kα radiation |
a = 9.6437 (9) Å | µ = 0.21 mm−1 |
b = 14.3801 (13) Å | T = 120 K |
c = 10.3503 (9) Å | 0.35 × 0.30 × 0.30 mm |
β = 113.659 (2)° | |
Data collection top
Bruker SMART 1000 CCD area detector diffractometer | 3473 independent reflections |
Absorption correction: multi-scan SADABS (Sheldrick, 1998a) | 2580 reflections with I > 2σ(I) |
Tmin = 0.924, Tmax = 0.931 | Rint = 0.032 |
10920 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.121 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.40 e Å−3 |
3473 reflections | Δρmin = −0.43 e Å−3 |
172 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
P1 | 0.52065 (5) | 0.92701 (3) | 0.81441 (5) | 0.01914 (13) | |
O1 | 0.38529 (14) | 0.93875 (8) | 0.84432 (13) | 0.0229 (3) | |
O2 | 0.52895 (14) | 0.83814 (8) | 0.72675 (13) | 0.0231 (3) | |
O3 | 0.53081 (15) | 0.99897 (9) | 0.70059 (13) | 0.0244 (3) | |
N1 | 0.67619 (16) | 0.92751 (10) | 0.95473 (16) | 0.0201 (3) | |
H1N | 0.6763 | 0.9553 | 1.0335 | 0.024* | |
C1 | 0.5370 (2) | 0.74795 (12) | 0.78237 (18) | 0.0218 (4) | |
C2 | 0.4057 (2) | 0.70493 (14) | 0.7737 (2) | 0.0293 (4) | |
H2A | 0.3117 | 0.7370 | 0.7359 | 0.035* | |
C3 | 0.4130 (2) | 0.61406 (14) | 0.8210 (2) | 0.0329 (5) | |
H3A | 0.3234 | 0.5835 | 0.8154 | 0.040* | |
C4 | 0.5503 (3) | 0.56777 (14) | 0.8763 (2) | 0.0328 (5) | |
H4A | 0.5550 | 0.5057 | 0.9092 | 0.039* | |
C5 | 0.6804 (2) | 0.61178 (13) | 0.8835 (2) | 0.0322 (4) | |
H5A | 0.7743 | 0.5796 | 0.9211 | 0.039* | |
C6 | 0.6752 (2) | 0.70289 (13) | 0.8363 (2) | 0.0272 (4) | |
H6A | 0.7645 | 0.7334 | 0.8410 | 0.033* | |
C7 | 0.4966 (2) | 1.09314 (12) | 0.70346 (19) | 0.0220 (4) | |
C8 | 0.4287 (2) | 1.13668 (13) | 0.5740 (2) | 0.0266 (4) | |
H8A | 0.4057 | 1.1029 | 0.4890 | 0.032* | |
C9 | 0.3947 (2) | 1.23095 (14) | 0.5708 (2) | 0.0311 (4) | |
H9A | 0.3490 | 1.2619 | 0.4827 | 0.037* | |
C10 | 0.4265 (2) | 1.27997 (13) | 0.6941 (2) | 0.0315 (4) | |
H10A | 0.4004 | 1.3439 | 0.6908 | 0.038* | |
C11 | 0.4968 (2) | 1.23525 (13) | 0.8227 (2) | 0.0273 (4) | |
H11A | 0.5206 | 1.2692 | 0.9077 | 0.033* | |
C12 | 0.5329 (2) | 1.14138 (13) | 0.82859 (19) | 0.0244 (4) | |
H12A | 0.5814 | 1.1108 | 0.9168 | 0.029* | |
C13 | 0.82656 (19) | 0.91889 (12) | 0.95086 (19) | 0.0216 (4) | |
H13A | 0.8138 | 0.9034 | 0.8535 | 0.026* | |
H13B | 0.8817 | 0.8669 | 1.0129 | 0.026* | |
C14 | 0.92056 (19) | 1.00647 (12) | 0.99734 (19) | 0.0225 (4) | |
H14A | 0.9275 | 1.0247 | 1.0920 | 0.027* | |
H14B | 0.8695 | 1.0575 | 0.9311 | 0.027* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
P1 | 0.0211 (2) | 0.0194 (2) | 0.0182 (2) | 0.00061 (16) | 0.00912 (18) | −0.00038 (16) |
O1 | 0.0213 (6) | 0.0262 (6) | 0.0223 (6) | 0.0007 (5) | 0.0097 (5) | −0.0014 (5) |
O2 | 0.0283 (7) | 0.0204 (6) | 0.0219 (6) | 0.0010 (5) | 0.0113 (5) | −0.0024 (5) |
O3 | 0.0340 (7) | 0.0217 (6) | 0.0215 (6) | 0.0028 (5) | 0.0153 (6) | 0.0031 (5) |
N1 | 0.0194 (7) | 0.0228 (7) | 0.0196 (7) | −0.0002 (5) | 0.0093 (6) | −0.0026 (6) |
C1 | 0.0273 (9) | 0.0201 (8) | 0.0212 (8) | −0.0024 (7) | 0.0129 (7) | −0.0038 (7) |
C2 | 0.0244 (9) | 0.0350 (10) | 0.0291 (10) | −0.0035 (8) | 0.0114 (8) | −0.0047 (8) |
C3 | 0.0362 (11) | 0.0332 (10) | 0.0374 (11) | −0.0122 (8) | 0.0231 (10) | −0.0055 (9) |
C4 | 0.0493 (12) | 0.0236 (9) | 0.0353 (11) | −0.0056 (8) | 0.0272 (10) | −0.0007 (8) |
C5 | 0.0338 (11) | 0.0233 (9) | 0.0432 (12) | 0.0042 (8) | 0.0194 (10) | 0.0013 (8) |
C6 | 0.0252 (9) | 0.0228 (9) | 0.0365 (11) | −0.0014 (7) | 0.0154 (8) | −0.0010 (8) |
C7 | 0.0224 (9) | 0.0211 (8) | 0.0258 (9) | 0.0005 (6) | 0.0132 (8) | 0.0024 (7) |
C8 | 0.0260 (9) | 0.0303 (9) | 0.0244 (9) | −0.0008 (7) | 0.0112 (8) | 0.0046 (7) |
C9 | 0.0301 (10) | 0.0321 (10) | 0.0327 (10) | 0.0026 (8) | 0.0143 (9) | 0.0136 (8) |
C10 | 0.0352 (11) | 0.0225 (9) | 0.0434 (12) | 0.0034 (8) | 0.0227 (10) | 0.0081 (8) |
C11 | 0.0298 (10) | 0.0241 (9) | 0.0287 (10) | −0.0026 (7) | 0.0125 (8) | −0.0002 (7) |
C12 | 0.0255 (9) | 0.0241 (9) | 0.0244 (9) | 0.0000 (7) | 0.0109 (8) | 0.0032 (7) |
C13 | 0.0203 (8) | 0.0214 (8) | 0.0251 (9) | −0.0004 (6) | 0.0111 (7) | −0.0024 (7) |
C14 | 0.0222 (9) | 0.0198 (8) | 0.0264 (9) | −0.0003 (7) | 0.0108 (7) | −0.0033 (7) |
Geometric parameters (Å, º) top
P1—O1 | 1.4672 (13) | C6—H6A | 0.9500 |
P1—O2 | 1.5878 (12) | C7—C8 | 1.382 (2) |
P1—O3 | 1.6002 (13) | C7—C12 | 1.385 (3) |
P1—N1 | 1.6158 (15) | C8—C9 | 1.392 (3) |
O2—C1 | 1.408 (2) | C8—H8A | 0.9500 |
O3—C7 | 1.397 (2) | C9—C10 | 1.380 (3) |
N1—C13 | 1.472 (2) | C9—H9A | 0.9500 |
N1—H1N | 0.9080 | C10—C11 | 1.386 (3) |
C1—C2 | 1.379 (3) | C10—H10A | 0.9500 |
C1—C6 | 1.383 (3) | C11—C12 | 1.389 (3) |
C2—C3 | 1.387 (3) | C11—H11A | 0.9500 |
C2—H2A | 0.9500 | C12—H12A | 0.9500 |
C3—C4 | 1.384 (3) | C13—C14 | 1.513 (2) |
C3—H3A | 0.9500 | C13—H13A | 0.9900 |
C4—C5 | 1.380 (3) | C13—H13B | 0.9900 |
C4—H4A | 0.9500 | C14—C14i | 1.522 (3) |
C5—C6 | 1.392 (3) | C14—H14A | 0.9900 |
C5—H5A | 0.9500 | C14—H14B | 0.9900 |
| | | |
O1—P1—O2 | 117.79 (7) | C8—C7—O3 | 116.27 (16) |
O1—P1—O3 | 113.79 (7) | C12—C7—O3 | 122.17 (16) |
O2—P1—O3 | 93.89 (7) | C7—C8—C9 | 118.67 (18) |
O1—P1—N1 | 113.17 (8) | C7—C8—H8A | 120.7 |
O2—P1—N1 | 106.00 (7) | C9—C8—H8A | 120.7 |
O3—P1—N1 | 110.48 (8) | C10—C9—C8 | 120.83 (18) |
C1—O2—P1 | 120.98 (11) | C10—C9—H9A | 119.6 |
C7—O3—P1 | 121.77 (11) | C8—C9—H9A | 119.6 |
C13—N1—P1 | 122.99 (12) | C9—C10—C11 | 119.51 (18) |
C13—N1—H1N | 114.6 | C9—C10—H10A | 120.2 |
P1—N1—H1N | 118.4 | C11—C10—H10A | 120.2 |
C2—C1—C6 | 121.83 (17) | C10—C11—C12 | 120.68 (18) |
C2—C1—O2 | 119.21 (16) | C10—C11—H11A | 119.7 |
C6—C1—O2 | 118.85 (15) | C12—C11—H11A | 119.7 |
C1—C2—C3 | 118.96 (18) | C7—C12—C11 | 118.75 (17) |
C1—C2—H2A | 120.5 | C7—C12—H12A | 120.6 |
C3—C2—H2A | 120.5 | C11—C12—H12A | 120.6 |
C4—C3—C2 | 120.23 (18) | N1—C13—C14 | 113.10 (14) |
C4—C3—H3A | 119.9 | N1—C13—H13A | 109.0 |
C2—C3—H3A | 119.9 | C14—C13—H13A | 109.0 |
C5—C4—C3 | 119.99 (19) | N1—C13—H13B | 109.0 |
C5—C4—H4A | 120.0 | C14—C13—H13B | 109.0 |
C3—C4—H4A | 120.0 | H13A—C13—H13B | 107.8 |
C4—C5—C6 | 120.58 (19) | C13—C14—C14i | 112.07 (17) |
C4—C5—H5A | 119.7 | C13—C14—H14A | 109.2 |
C6—C5—H5A | 119.7 | C14i—C14—H14A | 109.2 |
C1—C6—C5 | 118.41 (17) | C13—C14—H14B | 109.2 |
C1—C6—H6A | 120.8 | C14i—C14—H14B | 109.2 |
C5—C6—H6A | 120.8 | H14A—C14—H14B | 107.9 |
C8—C7—C12 | 121.53 (17) | | |
| | | |
O1—P1—O2—C1 | −65.65 (15) | C2—C1—C6—C5 | −0.4 (3) |
O3—P1—O2—C1 | 174.82 (13) | O2—C1—C6—C5 | −176.34 (17) |
N1—P1—O2—C1 | 62.22 (14) | C4—C5—C6—C1 | 0.1 (3) |
O1—P1—O3—C7 | 43.33 (15) | P1—O3—C7—C8 | −145.45 (14) |
O2—P1—O3—C7 | 166.06 (13) | P1—O3—C7—C12 | 36.6 (2) |
N1—P1—O3—C7 | −85.26 (14) | C12—C7—C8—C9 | −0.8 (3) |
O1—P1—N1—C13 | −178.63 (12) | O3—C7—C8—C9 | −178.84 (16) |
O2—P1—N1—C13 | 50.80 (14) | C7—C8—C9—C10 | −0.7 (3) |
O3—P1—N1—C13 | −49.71 (14) | C8—C9—C10—C11 | 1.7 (3) |
P1—O2—C1—C2 | 81.68 (19) | C9—C10—C11—C12 | −1.2 (3) |
P1—O2—C1—C6 | −102.27 (17) | C8—C7—C12—C11 | 1.3 (3) |
C6—C1—C2—C3 | 0.3 (3) | O3—C7—C12—C11 | 179.20 (16) |
O2—C1—C2—C3 | 176.19 (17) | C10—C11—C12—C7 | −0.3 (3) |
C1—C2—C3—C4 | 0.2 (3) | P1—N1—C13—C14 | 112.68 (15) |
C2—C3—C4—C5 | −0.5 (3) | N1—C13—C14—C14i | 175.84 (18) |
C3—C4—C5—C6 | 0.3 (3) | | |
Symmetry code: (i) −x+2, −y+2, −z+2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O1ii | 0.91 | 2.21 | 3.060 (2) | 156 |
Symmetry code: (ii) −x+1, −y+2, −z+2. |
Experimental details
| (72phcu-needle) | (72phcu-prism) |
Crystal data |
Chemical formula | C28H30N2O6P2 | C28H30N2O6P2 |
Mr | 552.48 | 552.48 |
Crystal system, space group | Monoclinic, P21/c | Monoclinic, P21/n |
Temperature (K) | 120 | 120 |
a, b, c (Å) | 15.7039 (19), 5.3299 (7), 16.932 (2) | 9.6437 (9), 14.3801 (13), 10.3503 (9) |
β (°) | 111.260 (2) | 113.659 (2) |
V (Å3) | 1320.8 (3) | 1314.7 (2) |
Z | 2 | 2 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.21 | 0.21 |
Crystal size (mm) | 0.35 × 0.05 × 0.04 | 0.35 × 0.30 × 0.30 |
|
Data collection |
Diffractometer | Bruker SMART 1000 CCD area detector diffractometer | Bruker SMART 1000 CCD area detector diffractometer |
Absorption correction | Multi-scan SADABS (Sheldrick, 1998a) | Multi-scan SADABS (Sheldrick, 1998a) |
Tmin, Tmax | 0.927, 0.996 | 0.924, 0.931 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13832, 3515, 2097 | 10920, 3473, 2580 |
Rint | 0.056 | 0.032 |
(sin θ/λ)max (Å−1) | 0.682 | 0.682 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.054, 0.131, 1.00 | 0.047, 0.121, 1.01 |
No. of reflections | 3515 | 3473 |
No. of parameters | 175 | 172 |
H-atom treatment | H-atom parameters constrained | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.62, −0.39 | 0.40, −0.43 |