Download citation
Download citation
link to html
The molecular structure of C11H12O4, based on a norbornene core, was established to confirm the configuration of an acetoxy side-chain group in addition to the formation of the endo product. The acetoxy side chain lies in an axial position relative to the five-membered fused ring. Bond distances and angles show no unusual features, with all geometric parameters lying within their expected ranges. The overall stereochemistry of the mol­ecule was ascertained from the chiral furan­one starting material.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270100010179/os1119sup1.cif
Contains datablocks I, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108270100010179/os1119Isup2.hkl
Contains datablock I

CCDC reference: 152632

Comment top

Strigol derivatives and members of the related sesquiterpene lactone family are known to induce germination of seeds from parasitic weeds. Early synthetic routes to the formation of endo-tricyclo exo-hydroxy lactones consisted of laborious processes which included the separation of diastereomers and selective recrystallization. A simpler synthetic procedure was achieved by reaction of the racemic alcohol mixture with an acyl donor in the presence of lipase, which acts as a catalyst (Thuring et al., 1996). The synthesis of the title compound, (I), encompasses the optically pure 5-acetoxy-2(5H)furanon (van der Deen et al., 1994), the acetyl functionality acting as temporary protection for the hydroxy group. \sch

The molecular structure of (I) is shown in Fig. 1, with selected geometric parameters provided in Table 1. The conformation of (I) is based on the standard bicyclo[2.2.1]heptene (norbornene) core, comprising two five-membered rings, with a third fused system in an endo configuration. Under the reaction conditions, there has been retention of configuration at the carbon centre (C4) and the molecular structure was based on having an S configuration here. Thus the configuration at atoms C1, C5, C6 and C9 are R, S, R and S.

All three five-membered rings in (I) are in envelope conformations. The C6, C7, C8, C9, C10 ring has 97% in the cis form (Evans & Boeyens, 1989) with puckering parameters of Q = 0.546 (2) Å, ϕ = 323.5 (2)°, (calculations from PLATON; Spek, 2000), whilst the second ring comprising C1, C5, C6, C10, C9, has 85% in the cis form [Q = 0.642 (2) Å, ϕ = 105.34 (19)°]. Both rings have C10 as the `envelope' atom. The third ring, with atoms O3, C2, C1, C5, C4, is not as puckered as the other two rings, being more `twisted' at C4 by 64% [Q = 0.150 (2) Å, ϕ = 150.6 (7)°].

Comparison of the bond distances and angles in (I) with those determined for norbornane carboxylic anhydride derivatives (Garbauskas & Buese, 1992; Schonk et al., 1992; Shnulin et al., 1982) show no significant variations associated with acetylation at O12. The three types of C—O bonds within each OC—O—C unit of (I) are consistent: C2—O11 = 1.194 (2) cf. C13—O15 = 1.195 (2)°; C2—O3 = 1.360 (2) cf. C13—O12 = 1.369 (2)°; and C4—O3 = 1.425 (2) cf. C4—O12 = 1.425 (2)°, and all other bond types lie in their expected ranges. The inter bridgehead angles C10—C6—C5 and C10—C9—C1 angles of 98.44 (15) and 98.99 (15)°, respectively, are contracted with respect to the tetrahedral value, as is the C6—C10—C9 angle of 93.82 (14)°. The angles at the non-substituted end of the norbornene fragment are 4° wider on average than those at the fused end [the C—C—C bond angles being in the range 102.70 (15)–108.53 (16)°].

The acetoxy side-chain (O12, C13, C14, O15) at C4 is axial and almost perpendicular to the carboxylate group which forms part of the fused ring (O11, C2, O3, C4); the angle between the two planes is 85.62 (16)°. The twisting of the acetoxy functionalities is indicated by the torsion angle values of −169.71 (17)° for O11—C2—O3—C4, and C4—O12—C13—O15 being 10.9 (3)°, each deviating from the trans conformation.

The crystal structure is not stabilized by inter- (or intra-) molecular hydrogen bonds - all contacts to potential donor atoms are quite long: O3···H10Bi of 2.60 Å, O11···H14Cii (2.55 Å), O12···H9iii (2.81 Å) and O15···H6i of 2.69 Å [symmetry codes: (i) 1 + x, y, z, (ii) x, −1 + y, z, (iii) −x, 1/2 + y, 1/2 − z].

Experimental top

C11H12O4 was synthesized from a Diels-Alder reaction of (+)5-acetoxy-2(5H)-furanon (van der Deen et al., 1994), with cyclopentadiene. The compound was recrystallized from a diethyl ether/hexane mixture.

Refinement top

The data set included some Friedel-related reflections, but due to the absence of anomalous scatterers, the absolute configuration could not be established reliably (Flack & Bernardinelli, 1999). A final value of 0.4 (13) was obtained for the Flack x parameter (Flack, 1983). The absolute configuration was therefore set in accordance with the known configuration of the optically pure precursor (+)5-acetoxy-2(5H)furanon. The estimated number of Friedel pairs measured was 935 (70%), and these reflections were merged in the final refinement cycles. The presence of only one hydrogen on atoms C7 and C8, was confirmed by inspection of the difference Fourier map. All hydrogen atoms except for those on methyl group C14 were placed in idealized positions and constrained to ride on their carbon atoms with Uiso(H) = 1.2Ueq(C). The methyl H atoms on C14 were constrained to an ideal geometry with Uiso(H) = 1.5Ueq(C), and allowed to rotate freely about the C—C bonds.

Computing details top

Data collection: locally modified CAD4-Version 5 Software (Enraf-Nonius, 1989); cell refinement: SET4 (de Boer & Duisenberg, 1984); data reduction: HELENA (Spek, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2000); software used to prepare material for publication: PLATON.

Figures top
[Figure 1] Fig. 1. Displacement ellipsoid plot (PLATON; Spek, 2000) of (I) drawn at 50% probability level.
(I) top
Crystal data top
C11H12O4Dx = 1.392 Mg m3
Mr = 208.21Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, P212121Cell parameters from 25 reflections
a = 7.4538 (8) Åθ = 9.7–14.0°
b = 7.5568 (7) ŵ = 0.11 mm1
c = 17.6385 (13) ÅT = 150 K
V = 993.52 (16) Å3Plates, colourless
Z = 40.50 × 0.50 × 0.50 mm
F(000) = 440
Data collection top
Enraf-Nonius CAD4T
diffractometer
Rint = 0.023
Radiation source: rotating anodeθmax = 27.4°, θmin = 2.3°
Graphite monochromatorh = 99
w/2θ scansk = 97
3710 measured reflectionsl = 022
1334 independent reflections3 standard reflections every 60 min
1213 reflections with I > 2σ(I) intensity decay: 2.2%
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.034H-atom parameters constrained
wR(F2) = 0.083 w = 1/[σ2(Fo2) + (0.0449P)2 + 0.1472P]
where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max = 0.001
1334 reflectionsΔρmax = 0.17 e Å3
149 parametersΔρmin = 0.24 e Å3
0 restraintsAbsolute structure: see experimental
Primary atom site location: structure-invariant direct methods
Crystal data top
C11H12O4V = 993.52 (16) Å3
Mr = 208.21Z = 4
Orthorhombic, P212121Mo Kα radiation
a = 7.4538 (8) ŵ = 0.11 mm1
b = 7.5568 (7) ÅT = 150 K
c = 17.6385 (13) Å0.50 × 0.50 × 0.50 mm
Data collection top
Enraf-Nonius CAD4T
diffractometer
Rint = 0.023
3710 measured reflections3 standard reflections every 60 min
1334 independent reflections intensity decay: 2.2%
1213 reflections with I > 2σ(I)
Refinement top
R[F2 > 2σ(F2)] = 0.0340 restraints
wR(F2) = 0.083H-atom parameters constrained
S = 1.08Δρmax = 0.17 e Å3
1334 reflectionsΔρmin = 0.24 e Å3
149 parametersAbsolute structure: see experimental
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C10.0254 (2)0.3942 (3)0.19351 (10)0.0204 (4)
H10.04480.45300.24370.028 (6)*
C20.1636 (2)0.3264 (2)0.18536 (10)0.0218 (4)
O30.24164 (16)0.39637 (18)0.12243 (7)0.0238 (3)
C40.1383 (2)0.5390 (2)0.09274 (10)0.0215 (4)
H40.13400.53600.03610.021 (5)*
C50.0487 (2)0.5251 (3)0.12713 (10)0.0223 (4)
H50.09010.64310.14600.025 (6)*
C60.1972 (3)0.4352 (3)0.07829 (11)0.0296 (5)
H60.25700.51270.03990.032 (6)*
C70.1257 (3)0.2615 (3)0.04904 (11)0.0327 (5)
H70.09620.23580.00220.043 (6)*
C80.1111 (3)0.1514 (3)0.10681 (12)0.0298 (5)
H80.07010.03250.10460.051 (8)*
C90.1715 (2)0.2492 (3)0.17728 (10)0.0239 (4)
H90.20780.17410.22140.029 (6)*
C100.3181 (2)0.3680 (3)0.14336 (11)0.0286 (5)
H10A0.35650.46350.17820.028 (5)*
H10B0.42340.30050.12510.031 (6)*
O110.24175 (19)0.2223 (2)0.22411 (9)0.0344 (4)
O120.21915 (17)0.69783 (17)0.11977 (8)0.0246 (3)
C130.3743 (3)0.7491 (3)0.08444 (10)0.0256 (4)
C140.4628 (3)0.8931 (3)0.12751 (14)0.0427 (6)
H14A0.56400.93930.09810.072 (10)*
H14B0.50660.84670.17600.095 (12)*
H14C0.37650.98830.13690.084 (11)*
O150.42704 (19)0.68259 (19)0.02715 (8)0.0327 (4)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.0190 (8)0.0225 (9)0.0196 (8)0.0002 (8)0.0002 (7)0.0019 (8)
C20.0199 (9)0.0205 (9)0.0250 (9)0.0034 (8)0.0017 (7)0.0010 (8)
O30.0183 (6)0.0246 (6)0.0283 (7)0.0013 (6)0.0036 (6)0.0015 (6)
C40.0194 (8)0.0226 (9)0.0223 (8)0.0008 (8)0.0023 (7)0.0005 (8)
C50.0174 (8)0.0228 (9)0.0266 (9)0.0014 (7)0.0000 (7)0.0006 (8)
C60.0192 (8)0.0407 (12)0.0290 (9)0.0030 (9)0.0051 (8)0.0063 (9)
C70.0240 (9)0.0486 (13)0.0255 (9)0.0120 (11)0.0001 (8)0.0130 (9)
C80.0227 (9)0.0279 (10)0.0388 (11)0.0070 (9)0.0028 (9)0.0112 (9)
C90.0206 (9)0.0249 (9)0.0263 (9)0.0032 (8)0.0015 (7)0.0016 (8)
C100.0185 (9)0.0345 (11)0.0328 (10)0.0021 (8)0.0000 (8)0.0008 (9)
O110.0248 (7)0.0361 (8)0.0423 (8)0.0018 (7)0.0040 (6)0.0139 (7)
O120.0237 (6)0.0242 (7)0.0258 (6)0.0053 (6)0.0034 (6)0.0016 (6)
C130.0245 (9)0.0226 (9)0.0295 (9)0.0020 (9)0.0003 (8)0.0053 (8)
C140.0412 (12)0.0395 (12)0.0474 (14)0.0191 (12)0.0071 (11)0.0049 (11)
O150.0317 (7)0.0349 (8)0.0316 (7)0.0070 (7)0.0097 (6)0.0016 (7)
Geometric parameters (Å, º) top
C1—C21.506 (3)C7—C81.320 (3)
C1—C51.543 (2)C7—H70.9500
C1—C91.572 (3)C8—C91.515 (3)
C1—H11.0000C8—H80.9500
C2—O111.194 (2)C9—C101.536 (3)
C2—O31.360 (2)C9—H91.0000
O3—C41.425 (2)C10—H10A0.9900
C4—O121.425 (2)C10—H10B0.9900
C4—C51.524 (3)O12—C131.369 (2)
C4—H41.0000C13—O151.195 (2)
C5—C61.559 (3)C13—C141.482 (3)
C5—H51.0000C14—H14A0.9800
C6—C71.507 (3)C14—H14B0.9800
C6—C101.545 (3)C14—H14C0.9800
C6—H61.0000
C2—C1—C5104.56 (14)C8—C7—C6108.30 (16)
C2—C1—C9113.17 (15)C8—C7—H7125.9
C5—C1—C9103.35 (14)C6—C7—H7125.9
C2—C1—H1111.7C7—C8—C9107.53 (17)
C5—C1—H1111.7C7—C8—H8126.2
C9—C1—H1111.7C9—C8—H8126.2
O11—C2—O3120.96 (17)C8—C9—C10100.20 (15)
O11—C2—C1128.77 (17)C8—C9—C1106.48 (14)
O3—C2—C1110.23 (15)C10—C9—C198.99 (15)
C2—O3—C4111.26 (14)C8—C9—H9116.2
O3—C4—O12106.58 (13)C10—C9—H9116.2
O3—C4—C5107.23 (14)C1—C9—H9116.2
O12—C4—C5108.17 (15)C9—C10—C693.82 (14)
O3—C4—H4111.5C9—C10—H10A113.0
O12—C4—H4111.5C6—C10—H10A113.0
C5—C4—H4111.5C9—C10—H10B113.0
C4—C5—C1104.07 (14)C6—C10—H10B113.0
C4—C5—C6117.36 (15)H10A—C10—H10B110.4
C1—C5—C6102.70 (15)C13—O12—C4116.33 (15)
C4—C5—H5110.7O15—C13—O12122.91 (18)
C1—C5—H5110.7O15—C13—C14126.55 (19)
C6—C5—H5110.7O12—C13—C14110.53 (16)
C7—C6—C10100.04 (17)C13—C14—H14A109.5
C7—C6—C5108.53 (16)C13—C14—H14B109.5
C10—C6—C598.44 (15)H14A—C14—H14B109.5
C7—C6—H6115.8C13—C14—H14C109.5
C10—C6—H6115.8H14A—C14—H14C109.5
C5—C6—H6115.8H14B—C14—H14C109.5
C5—C1—C2—O11179.82 (19)C1—C5—C6—C1039.82 (18)
C9—C1—C2—O1168.4 (2)C10—C6—C7—C832.7 (2)
C5—C1—C2—O32.61 (19)C5—C6—C7—C869.9 (2)
C9—C1—C2—O3109.14 (16)C6—C7—C8—C90.4 (2)
O11—C2—O3—C4169.71 (17)C7—C8—C9—C1033.6 (2)
C1—C2—O3—C412.50 (19)C7—C8—C9—C169.0 (2)
C2—O3—C4—O1298.48 (16)C2—C1—C9—C844.0 (2)
C2—O3—C4—C517.17 (19)C5—C1—C9—C868.50 (18)
O3—C4—C5—C114.44 (18)C2—C1—C9—C10147.52 (16)
O12—C4—C5—C1100.16 (16)C5—C1—C9—C1035.02 (17)
O3—C4—C5—C698.20 (18)C8—C9—C10—C649.74 (17)
O12—C4—C5—C6147.20 (16)C1—C9—C10—C658.94 (16)
C2—C1—C5—C47.24 (18)C7—C6—C10—C949.44 (17)
C9—C1—C5—C4125.89 (15)C5—C6—C10—C961.21 (17)
C2—C1—C5—C6115.59 (16)O3—C4—O12—C1376.42 (17)
C9—C1—C5—C63.06 (17)C5—C4—O12—C13168.55 (15)
C4—C5—C6—C749.6 (2)C4—O12—C13—O1510.9 (3)
C1—C5—C6—C763.81 (18)C4—O12—C13—C14168.50 (17)
C4—C5—C6—C10153.23 (17)

Experimental details

Crystal data
Chemical formulaC11H12O4
Mr208.21
Crystal system, space groupOrthorhombic, P212121
Temperature (K)150
a, b, c (Å)7.4538 (8), 7.5568 (7), 17.6385 (13)
V3)993.52 (16)
Z4
Radiation typeMo Kα
µ (mm1)0.11
Crystal size (mm)0.50 × 0.50 × 0.50
Data collection
DiffractometerEnraf-Nonius CAD4T
diffractometer
Absorption correction
No. of measured, independent and
observed [I > 2σ(I)] reflections
3710, 1334, 1213
Rint0.023
(sin θ/λ)max1)0.648
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.034, 0.083, 1.08
No. of reflections1334
No. of parameters149
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å3)0.17, 0.24
Absolute structureSee experimental

Computer programs: locally modified CAD4-Version 5 Software (Enraf-Nonius, 1989), SET4 (de Boer & Duisenberg, 1984), HELENA (Spek, 1997), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), PLATON (Spek, 2000), PLATON.

Selected geometric parameters (Å, º) top
C2—O111.194 (2)C4—O121.425 (2)
C2—O31.360 (2)O12—C131.369 (2)
O3—C41.425 (2)C13—O151.195 (2)
C10—C6—C598.44 (15)C9—C10—C693.82 (14)
C10—C9—C198.99 (15)
O11—C2—O3—C4169.71 (17)C4—O12—C13—O1510.9 (3)
 

Follow Acta Cryst. C
Sign up for e-alerts
Follow Acta Cryst. on Twitter
Follow us on facebook
Sign up for RSS feeds