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A new polymorph of the title compound, [Co(C6H7N2S)3]·H2O, was obtained by slow evaporation of the compound from tetra­hydro­furan. The structure is almost exactly the same as that of the first polymorph [Seth (1994). Acta Cryst. C50, 1196–1199]. The packing arrangement and position of the water mol­ecule differ in the two forms.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536803011486/om6145sup1.cif
Contains datablocks default, I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536803011486/om6145Isup2.hkl
Contains datablock I

CCDC reference: 217349

Key indicators

  • Single-crystal X-ray study
  • T = 293 K
  • Mean [sigma](C-C) = 0.011 Å
  • R factor = 0.061
  • wR factor = 0.139
  • Data-to-parameter ratio = 19.0

checkCIF results

No syntax errors found

ADDSYM reports no extra symmetry


Yellow Alert Alert Level C:
RINTA_01 Alert C The value of Rint is greater than 0.10 Rint given 0.103 General Notes
REFLT_03 From the CIF: _diffrn_reflns_theta_max 28.08 From the CIF: _reflns_number_total 5124 Count of symmetry unique reflns 2844 Completeness (_total/calc) 180.17% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 2280 Fraction of Friedel pairs measured 0.802 Are heavy atom types Z>Si present yes Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF.
0 Alert Level A = Potentially serious problem
0 Alert Level B = Potential problem
1 Alert Level C = Please check

Comment top

As part of our systematic work on the coordination mode of the potential ambidentate ligand 4,6-dimethylpirimidine-2(1H)-thione (4,6-Me2pymSH) (Lang et al., 2002; Fernandes et al., 2002; Oliveira et al., 2002), we studied the reaction of the ligand with the cobalt(II) acetate tetrahydrate. Aerial oxidization with slow evaporation of tetrahydrofuran produced the crystals of the blue CoIII title compound, (I), in the acentric orthorhombic space group Pca21 (Fig. 1). The selected crystal showed only the Δ optical isomer with no racemic twinning. Seth (1994) reported the first polymorph of the title compound in the acentric monoclinic space group P21; racemic twinning was not reported.

The Co(4,6-Me2pymS)3 molecule of (I) shows almost the same strongly distorted fac-octahedral geometry, due to the small bite angle of the three bidentate 4,6-Me2pymS ligands, as that reported in the earlier polymorph. The planes formed by each of the three ligands are mutually perpendicular, with angles of 85.82 (12), 87.35 (12) and 86.19 (13)° between them. The Co atom is situated 0.1322 Å from the point defined by the intersection of the three planes. The bond distances and angles within the ligands are close to those reported for similar compounds.

The difference between the two polymorphs lies in the packing and the position of the water solvate molecule. The packing diagram of the title compound is shown in Fig. 2. In the unit cell of the first polymorph, the water molecule forms a hydrogen bond to only one imidizolium N atom with a O···N distance of 2.969 (7) Å. In the new polymorph, the water molecule bridges between two neighbouring Co(4,6-Me2pymS)3 molecules, forming hydrogen bonding to two different N atoms, as shown in Table 4. Comparing the volume of the asymmetric units, the first polymorph occupies a slightly larger volume, 572.6 (1) Å−3, than the new polymorph, 564.8 (1) Å−3, implying a greater packing efficiency in the latter.

Experimental top

The compound 4,6-dimethylpirimidine-2(1H)-thione (4,6-Me2pymSH) was prepared according to a literature method (Nigam et al., 1983). The title complex was synthesized by the following procedure: 0.42 g (3 mmol) of 4,6-Me2pymSH was dissolved in 20 ml of thf (freshly distilled) in a Schlenk tube kept under N2 atmosphere. To this solution, 0.25 g (1 mmol) of the [Co(O2CCH3)2]·4H2O dissolved in 10 ml of THF was added over 10 min, and the mixture was stirred for about 2 h. Slow evaporation of the solvent in air led to the appearance of a blue microcrystalline solid. Yield: ~96% (0.45 g). Elemental analysis: calculated for C18H23CoN6S3: C 43.71, H 4.68, N 16.99%; found: C 43.69, H 4.64, N 17.1%. FAB MS: m/z 476.0 (14%, M), m/z 337.0 (32%,{Co[4,6-Me2pymS]2}), m/z 198.0 (15%,{Co[4,6-Me2pymS]}).

Refinement top

The intensities of the measured reflections were, in general, weak leading to a slightly high value of Rint. The H atoms of the methyl groups were refined as riding atoms with ideal tetrahedral geometry [d(C—H) = 0.96 Å] allowed to rotate to fit the electron density; the isotropic displacement parameters were fixed to be 50% larger than those of the atoms to which the H atoms were bonded. The aromatic H atoms were constrained to ideal trigonal planar geometry [d(C—H) = 0.93 Å]; their isotropic displacement parameters were set to be 20% larger than the those of the atoms to which the h ATOMS were bonded. H atoms were located in A difference Fourier map and refined freely with isotropic displacement parameters 50% larger than that of the parent O atom. A total of 2326 Friedel pairs were measured.

Computing details top

Data collection: SMART (Bruker, 1997); cell refinement: SMART; data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97.

Figures top
[Figure 1] Fig. 1. View of molecule with atomic labelling scheme. Displacement ellipsoids are drawn at the 50% probability level.
[Figure 2] Fig. 2. The crystal packing diagram of the title compound.
fac-tris(4,6-dimethylpyrimidine-2-thiolato-N,S)cobalt(III) monohydrate top
Crystal data top
[Co(C6H7N2S)3]·H2OF(000) = 1024
Mr = 494.56Dx = 1.454 Mg m3
Orthorhombic, Pca21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2acCell parameters from 3091 reflections
a = 16.969 (2) Åθ = 5.5–54.7°
b = 8.0436 (11) ŵ = 1.06 mm1
c = 16.552 (2) ÅT = 293 K
V = 2259.2 (5) Å3Block, blue
Z = 40.19 × 0.17 × 0.17 mm
Data collection top
Bruker SMART area-detector
diffractometer
2380 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.103
ϕ and ω scansθmax = 28.1°, θmin = 2.4°
Absorption correction: multi-scan
(DENZO-SMN, Otwinowski & Minor, 1997)
h = 2222
Tmin = 0.824, Tmax = 0.841k = 105
12629 measured reflectionsl = 2121
5124 independent reflections
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.061H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.139 w = 1/[σ2(Fo2) + (0.0482P)2]
where P = (Fo2 + 2Fc2)/3
S = 0.85(Δ/σ)max = 0.001
5124 reflectionsΔρmax = 0.76 e Å3
269 parametersΔρmin = 0.33 e Å3
1 restraintAbsolute structure: Flack (1983)
Primary atom site location: structure-invariant direct methodsAbsolute structure parameter: 0.03 (3)
Crystal data top
[Co(C6H7N2S)3]·H2OV = 2259.2 (5) Å3
Mr = 494.56Z = 4
Orthorhombic, Pca21Mo Kα radiation
a = 16.969 (2) ŵ = 1.06 mm1
b = 8.0436 (11) ÅT = 293 K
c = 16.552 (2) Å0.19 × 0.17 × 0.17 mm
Data collection top
Bruker SMART area-detector
diffractometer
5124 independent reflections
Absorption correction: multi-scan
(DENZO-SMN, Otwinowski & Minor, 1997)
2380 reflections with I > 2σ(I)
Tmin = 0.824, Tmax = 0.841Rint = 0.103
12629 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.061H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.139Δρmax = 0.76 e Å3
S = 0.85Δρmin = 0.33 e Å3
5124 reflectionsAbsolute structure: Flack (1983)
269 parametersAbsolute structure parameter: 0.03 (3)
1 restraint
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Co10.53579 (5)0.53650 (11)0.01650 (5)0.0410 (3)
S10.63209 (13)0.4715 (3)0.07154 (12)0.0565 (6)
C110.6524 (4)0.3403 (9)0.0069 (5)0.0422 (18)
N120.6033 (3)0.3685 (7)0.0686 (3)0.0379 (14)
C130.6098 (4)0.2789 (9)0.1352 (4)0.0397 (18)
C1310.5523 (5)0.3071 (9)0.2026 (4)0.059 (2)
H13A0.49960.29780.18210.088*
H13B0.56010.41610.22470.088*
H13C0.56050.22530.24400.088*
C140.6696 (4)0.1607 (9)0.1408 (5)0.048 (2)
H140.67610.09830.18760.058*
C150.7186 (4)0.1381 (9)0.0756 (5)0.053 (2)
C1510.7819 (5)0.0085 (9)0.0770 (5)0.071 (2)
H15A0.83140.05840.06310.106*
H15B0.76950.07720.03870.106*
H15C0.78530.03880.13020.106*
N160.7110 (3)0.2289 (8)0.0068 (4)0.0508 (16)
S20.60312 (12)0.7456 (3)0.07469 (12)0.0508 (5)
C210.5206 (4)0.7431 (9)0.1355 (4)0.0417 (18)
N220.4711 (4)0.6204 (7)0.1075 (3)0.0379 (15)
C230.4030 (5)0.6024 (9)0.1453 (5)0.047 (2)
C2310.3464 (5)0.4733 (10)0.1127 (5)0.065 (2)
H23A0.37230.36730.11040.098*
H23B0.32960.50490.05950.098*
H23C0.30130.46580.14760.098*
C240.3829 (5)0.7049 (10)0.2081 (5)0.054 (2)
H240.33440.69450.23390.064*
C250.4375 (6)0.8259 (10)0.2321 (4)0.055 (2)
C2510.4176 (6)0.9406 (11)0.2992 (4)0.070 (3)
H25A0.38941.03460.27830.104*
H25B0.46520.97800.32480.104*
H25C0.38550.88360.33800.104*
N260.5049 (4)0.8462 (8)0.1947 (4)0.0483 (17)
S30.46723 (15)0.6945 (2)0.07179 (13)0.0582 (6)
C310.4263 (5)0.5012 (9)0.0891 (5)0.048 (2)
N320.4607 (4)0.3891 (7)0.0399 (3)0.0426 (15)
C330.4395 (5)0.2275 (9)0.0462 (4)0.0432 (19)
C3310.4786 (4)0.1058 (8)0.0058 (5)0.052 (2)
H33A0.47060.13540.06140.078*
H33B0.53400.10450.00580.078*
H33C0.45680.00250.00400.078*
C340.3826 (5)0.1887 (10)0.1014 (4)0.049 (2)
H340.36710.07850.10720.059*
C350.3477 (5)0.3089 (11)0.1490 (5)0.053 (2)
C3510.2844 (5)0.2726 (11)0.2079 (5)0.077 (3)
H35A0.29470.33130.25730.115*
H35B0.23470.30770.18620.115*
H35C0.28290.15530.21840.115*
N360.3698 (4)0.4699 (9)0.1418 (4)0.0512 (17)
O10.2188 (3)0.8035 (7)0.3419 (3)0.0757 (18)
H1A0.24070.80920.39670.113*
H1B0.20090.73490.32050.113*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Co10.0494 (6)0.0323 (5)0.0413 (5)0.0056 (5)0.0001 (6)0.0000 (6)
S10.0701 (15)0.0526 (13)0.0468 (11)0.0030 (12)0.0136 (11)0.0044 (13)
C110.037 (4)0.045 (4)0.045 (5)0.007 (4)0.014 (4)0.007 (4)
N120.043 (4)0.037 (3)0.034 (3)0.001 (3)0.003 (3)0.002 (3)
C130.043 (4)0.040 (5)0.036 (4)0.011 (4)0.010 (4)0.002 (4)
C1310.089 (7)0.048 (5)0.039 (4)0.006 (5)0.007 (5)0.005 (4)
C140.049 (5)0.044 (5)0.052 (5)0.009 (4)0.008 (4)0.000 (4)
C150.047 (5)0.046 (5)0.066 (5)0.003 (4)0.006 (5)0.017 (5)
C1510.051 (5)0.068 (6)0.093 (6)0.009 (4)0.002 (5)0.005 (6)
N160.046 (4)0.047 (4)0.060 (5)0.003 (3)0.012 (4)0.006 (4)
S20.0527 (13)0.0428 (11)0.0569 (12)0.0115 (10)0.0027 (11)0.0063 (10)
C210.051 (5)0.031 (4)0.043 (4)0.006 (4)0.006 (4)0.005 (3)
N220.037 (4)0.034 (4)0.043 (3)0.005 (3)0.003 (3)0.003 (3)
C230.048 (5)0.033 (5)0.060 (5)0.004 (4)0.007 (5)0.013 (4)
C2310.052 (5)0.050 (5)0.094 (6)0.021 (5)0.022 (5)0.011 (5)
C240.053 (5)0.055 (6)0.053 (5)0.007 (5)0.012 (4)0.007 (4)
C250.085 (7)0.037 (5)0.043 (5)0.010 (5)0.012 (5)0.006 (4)
C2510.081 (7)0.068 (6)0.060 (6)0.009 (6)0.005 (5)0.013 (5)
N260.057 (4)0.040 (4)0.048 (4)0.002 (3)0.013 (4)0.002 (3)
S30.0856 (17)0.0330 (12)0.0560 (12)0.0059 (12)0.0200 (14)0.0052 (11)
C310.067 (6)0.036 (5)0.040 (4)0.003 (4)0.008 (4)0.005 (4)
N320.062 (4)0.035 (3)0.030 (3)0.002 (3)0.009 (3)0.000 (3)
C330.056 (5)0.032 (5)0.042 (4)0.004 (4)0.008 (4)0.004 (4)
C3310.065 (5)0.029 (4)0.061 (5)0.006 (4)0.002 (5)0.000 (4)
C340.066 (6)0.046 (5)0.035 (4)0.013 (4)0.003 (4)0.011 (4)
C350.055 (6)0.059 (6)0.044 (5)0.014 (5)0.011 (4)0.005 (5)
C3510.070 (6)0.089 (7)0.072 (6)0.002 (6)0.021 (5)0.017 (5)
N360.055 (4)0.052 (5)0.047 (4)0.002 (4)0.011 (3)0.001 (4)
O10.076 (4)0.085 (4)0.066 (4)0.007 (3)0.017 (3)0.008 (3)
Geometric parameters (Å, º) top
Co1—N121.970 (6)C231—H23A0.9600
Co1—N321.975 (6)C231—H23B0.9600
Co1—N221.982 (6)C231—H23C0.9600
Co1—S22.250 (2)C24—C251.402 (11)
Co1—S12.251 (2)C24—H240.9300
Co1—S32.259 (2)C25—N261.310 (10)
S1—C111.708 (8)C25—C2511.483 (10)
C11—N121.338 (8)C251—H25A0.9600
C11—N161.339 (8)C251—H25B0.9600
N12—C131.322 (8)C251—H25C0.9600
C13—C141.393 (9)S3—C311.727 (7)
C13—C1311.498 (10)C31—N361.321 (9)
C131—H13A0.9600C31—N321.348 (9)
C131—H13B0.9600N32—C331.353 (8)
C131—H13C0.9600C33—C341.365 (9)
C14—C151.374 (10)C33—C3311.463 (9)
C14—H140.9300C331—H33A0.9600
C15—N161.359 (10)C331—H33B0.9600
C15—C1511.497 (9)C331—H33C0.9600
C151—H15A0.9600C34—C351.380 (10)
C151—H15B0.9600C34—H340.9300
C151—H15C0.9600C35—N361.354 (9)
S2—C211.724 (7)C35—C3511.479 (10)
C21—N261.311 (9)C351—H35A0.9600
C21—N221.377 (8)C351—H35B0.9600
N22—C231.322 (9)C351—H35C0.9600
C23—C241.369 (10)O1—H1A0.9821
C23—C2311.515 (10)O1—H1B0.7228
N12—Co1—N3299.8 (2)N22—C23—C231117.4 (7)
N12—Co1—N22102.8 (2)C24—C23—C231121.6 (8)
N32—Co1—N22101.9 (3)C23—C231—H23A109.5
N12—Co1—S291.73 (17)C23—C231—H23B109.5
N32—Co1—S2168.17 (19)H23A—C231—H23B109.5
N22—Co1—S272.63 (18)C23—C231—H23C109.5
N12—Co1—S172.69 (18)H23A—C231—H23C109.5
N32—Co1—S191.30 (19)H23B—C231—H23C109.5
N22—Co1—S1166.66 (19)C23—C24—C25117.9 (8)
S2—Co1—S194.71 (8)C23—C24—H24121.1
N12—Co1—S3165.56 (18)C25—C24—H24121.1
N32—Co1—S372.53 (18)N26—C25—C24122.0 (7)
N22—Co1—S390.86 (17)N26—C25—C251118.4 (8)
S2—Co1—S396.77 (8)C24—C25—C251119.6 (9)
S1—Co1—S394.92 (9)C25—C251—H25A109.5
C11—S1—Co178.3 (3)C25—C251—H25B109.5
N12—C11—N16125.2 (7)H25A—C251—H25B109.5
N12—C11—S1110.5 (5)C25—C251—H25C109.5
N16—C11—S1124.2 (6)H25A—C251—H25C109.5
C13—N12—C11119.5 (6)H25B—C251—H25C109.5
C13—N12—Co1142.0 (5)C25—N26—C21116.9 (7)
C11—N12—Co198.3 (4)C31—S3—Co178.9 (3)
N12—C13—C14119.2 (7)N36—C31—N32125.9 (7)
N12—C13—C131118.9 (7)N36—C31—S3125.0 (6)
C14—C13—C131121.9 (7)N32—C31—S3109.1 (6)
C13—C131—H13A109.5C31—N32—C33118.7 (6)
C13—C131—H13B109.5C31—N32—Co199.4 (5)
H13A—C131—H13B109.5C33—N32—Co1141.7 (5)
C13—C131—H13C109.5N32—C33—C34117.4 (7)
H13A—C131—H13C109.5N32—C33—C331118.5 (7)
H13B—C131—H13C109.5C34—C33—C331124.1 (7)
C15—C14—C13118.7 (7)C33—C331—H33A109.5
C15—C14—H14120.7C33—C331—H33B109.5
C13—C14—H14120.7H33A—C331—H33B109.5
N16—C15—C14121.9 (7)C33—C331—H33C109.5
N16—C15—C151117.1 (8)H33A—C331—H33C109.5
C14—C15—C151120.9 (8)H33B—C331—H33C109.5
C15—C151—H15A109.5C33—C34—C35121.7 (7)
C15—C151—H15B109.5C33—C34—H34119.2
H15A—C151—H15B109.5C35—C34—H34119.2
C15—C151—H15C109.5N36—C35—C34120.0 (7)
H15A—C151—H15C109.5N36—C35—C351116.6 (8)
H15B—C151—H15C109.5C34—C35—C351123.3 (8)
C11—N16—C15115.5 (7)C35—C351—H35A109.5
C21—S2—Co180.1 (3)C35—C351—H35B109.5
N26—C21—N22125.5 (7)H35A—C351—H35B109.5
N26—C21—S2126.5 (6)C35—C351—H35C109.5
N22—C21—S2107.9 (5)H35A—C351—H35C109.5
C23—N22—C21116.9 (6)H35B—C351—H35C109.5
C23—N22—Co1143.8 (5)C31—N36—C35116.2 (7)
C21—N22—Co199.3 (5)H1A—O1—H1B130.3
N22—C23—C24120.8 (7)
N12—Co1—S1—C112.6 (3)N32—Co1—N22—C21169.6 (4)
N32—Co1—S1—C1197.2 (3)S2—Co1—N22—C210.5 (4)
N22—Co1—S1—C1174.9 (8)S1—Co1—N22—C2118.5 (10)
S2—Co1—S1—C1193.0 (2)S3—Co1—N22—C2197.3 (4)
S3—Co1—S1—C11169.8 (2)C21—N22—C23—C241.5 (10)
Co1—S1—C11—N123.9 (4)Co1—N22—C23—C24176.4 (6)
Co1—S1—C11—N16178.0 (6)C21—N22—C23—C231177.2 (7)
N16—C11—N12—C131.9 (10)Co1—N22—C23—C2310.8 (12)
S1—C11—N12—C13180.0 (5)N22—C23—C24—C251.7 (11)
N16—C11—N12—Co1177.5 (6)C231—C23—C24—C25177.2 (7)
S1—C11—N12—Co14.5 (5)C23—C24—C25—N262.4 (12)
N32—Co1—N12—C1388.8 (8)C23—C24—C25—C251179.3 (8)
N22—Co1—N12—C1316.0 (8)C24—C25—N26—C212.9 (11)
S2—Co1—N12—C1388.5 (7)C251—C25—N26—C21179.8 (7)
S1—Co1—N12—C13177.1 (8)N22—C21—N26—C252.8 (11)
S3—Co1—N12—C13145.3 (6)S2—C21—N26—C25178.1 (6)
N32—Co1—N12—C1185.0 (4)N12—Co1—S3—C3159.2 (8)
N22—Co1—N12—C11170.3 (4)N32—Co1—S3—C310.3 (3)
S2—Co1—N12—C1197.7 (4)N22—Co1—S3—C31102.5 (3)
S1—Co1—N12—C113.3 (4)S2—Co1—S3—C31175.1 (3)
S3—Co1—N12—C1128.4 (10)S1—Co1—S3—C3189.5 (3)
C11—N12—C13—C142.2 (9)Co1—S3—C31—N36179.8 (7)
Co1—N12—C13—C14175.1 (6)Co1—S3—C31—N320.4 (5)
C11—N12—C13—C131177.6 (6)N36—C31—N32—C333.4 (11)
Co1—N12—C13—C1314.7 (11)S3—C31—N32—C33177.2 (5)
N12—C13—C14—C151.7 (10)N36—C31—N32—Co1179.9 (7)
C131—C13—C14—C15178.0 (6)S3—C31—N32—Co10.5 (5)
C13—C14—C15—N160.8 (11)N12—Co1—N32—C31167.0 (4)
C13—C14—C15—C151177.7 (6)N22—Co1—N32—C3187.5 (4)
N12—C11—N16—C150.9 (10)S2—Co1—N32—C3126.2 (11)
S1—C11—N16—C15178.8 (5)S1—Co1—N32—C3194.4 (4)
C14—C15—N16—C110.4 (10)S3—Co1—N32—C310.4 (4)
C151—C15—N16—C11178.2 (6)N12—Co1—N32—C338.3 (9)
N12—Co1—S2—C21102.5 (3)N22—Co1—N32—C3397.2 (8)
N32—Co1—S2—C2164.4 (9)S2—Co1—N32—C33158.4 (7)
N22—Co1—S2—C210.4 (3)S1—Co1—N32—C3381.0 (8)
S1—Co1—S2—C21175.3 (2)S3—Co1—N32—C33175.7 (8)
S3—Co1—S2—C2189.2 (2)C31—N32—C33—C341.4 (10)
Co1—S2—C21—N26176.5 (7)Co1—N32—C33—C34176.1 (6)
Co1—S2—C21—N220.6 (4)C31—N32—C33—C331178.4 (6)
N26—C21—N22—C232.1 (10)Co1—N32—C33—C3313.6 (12)
S2—C21—N22—C23178.1 (5)N32—C33—C34—C350.3 (10)
N26—C21—N22—Co1176.7 (6)C331—C33—C34—C35180.0 (7)
S2—C21—N22—Co10.6 (5)C33—C34—C35—N360.3 (12)
N12—Co1—N22—C2394.6 (8)C33—C34—C35—C351178.3 (7)
N32—Co1—N22—C238.5 (9)N32—C31—N36—C353.3 (11)
S2—Co1—N22—C23177.7 (9)S3—C31—N36—C35177.4 (6)
S1—Co1—N22—C23163.4 (6)C34—C35—N36—C311.4 (11)
S3—Co1—N22—C2380.8 (8)C351—C35—N36—C31179.9 (7)
N12—Co1—N22—C2187.3 (4)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1—H1A···N16i0.982.022.990 (8)168
O1—H1A···S1i0.983.173.654 (6)112
O1—H1B···N36ii0.722.523.088 (8)137
Symmetry codes: (i) x+1, y+1, z+1/2; (ii) x+1/2, y, z+1/2.

Experimental details

Crystal data
Chemical formula[Co(C6H7N2S)3]·H2O
Mr494.56
Crystal system, space groupOrthorhombic, Pca21
Temperature (K)293
a, b, c (Å)16.969 (2), 8.0436 (11), 16.552 (2)
V3)2259.2 (5)
Z4
Radiation typeMo Kα
µ (mm1)1.06
Crystal size (mm)0.19 × 0.17 × 0.17
Data collection
DiffractometerBruker SMART area-detector
diffractometer
Absorption correctionMulti-scan
(DENZO-SMN, Otwinowski & Minor, 1997)
Tmin, Tmax0.824, 0.841
No. of measured, independent and
observed [I > 2σ(I)] reflections
12629, 5124, 2380
Rint0.103
(sin θ/λ)max1)0.662
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.061, 0.139, 0.85
No. of reflections5124
No. of parameters269
No. of restraints1
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.76, 0.33
Absolute structureFlack (1983)
Absolute structure parameter0.03 (3)

Computer programs: SMART (Bruker, 1997), SMART, SAINT (Bruker, 1997), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 (Farrugia, 1997), SHELXL97.

Selected geometric parameters (Å, º) top
Co1—N121.970 (6)Co1—S22.250 (2)
Co1—N321.975 (6)Co1—S12.251 (2)
Co1—N221.982 (6)Co1—S32.259 (2)
N12—Co1—N3299.8 (2)N32—Co1—S191.30 (19)
N12—Co1—N22102.8 (2)S2—Co1—S194.71 (8)
N32—Co1—N22101.9 (3)N32—Co1—S372.53 (18)
N12—Co1—S291.73 (17)N22—Co1—S390.86 (17)
N22—Co1—S272.63 (18)S2—Co1—S396.77 (8)
N12—Co1—S172.69 (18)S1—Co1—S394.92 (9)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1—H1A···N16i0.982.022.990 (8)168
O1—H1A···S1i0.983.173.654 (6)112
O1—H1B···N36ii0.722.523.088 (8)137
Symmetry codes: (i) x+1, y+1, z+1/2; (ii) x+1/2, y, z+1/2.
 

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