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Copper(II) chemistry has always attracted interest owing to its rich coordination geometry. On the one hand, the variety of geometries that the copper(II) atom can adopt makes it a versatile metal with high applicability. On the other hand, the difficulties in controlling the copper(II) geometry may hinder its use in the design of molecules. To evaluate the use of Hirshfeld surfaces for obtaining information related to coordination geometry in copper(II) compounds, the behaviour of the surfaces generated for the copper(II) centres in different coordination environments is analysed. Structural details of four compounds were retrieved from the Cambridge Structural Database and analysed along with the crystal structure of a new compound, namely chloro-bis­(1,10-phenanthroline)copper(II) 2-carb­oxy-4-nitro­benzoate 4-nitro­phthalic acid dihydrate {[CuCl(C12H8N2)2]+(C8H4NO6)·C8H5NO6·2H2O}, here described. The obtained Hirshfeld surfaces behave differently according to the coordination environment, presenting different shapes and shape-related parameters. Furthermore, the curvature properties and fingerprint plots can be useful for evaluating the differences that might occur in the coordination environment.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600576720011413/oc5003sup1.cif
Contains datablock I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600576720011413/oc5003Isup2.hkl
Contains datablock I

pdf

Portable Document Format (PDF) file https://doi.org/10.1107/S1600576720011413/oc5003sup3.pdf
Supplementary material

CCDC reference: 2000090

Computing details top

Data collection: CrysAlis PRO (Agilent Technologies, ); cell refinement: CrysAlis PRO (Agilent Technologies, ); data reduction: CrysAlis PRO (Agilent Technologies, ); program(s) used to refine structure: SHELXL2016/6 (Sheldrick, 2016).

(I) top
Crystal data top
C24H16ClCuN4·C8H4NO6·C8H5NO6·2(H2O)Z = 2
Mr = 916.68F(000) = 938
Triclinic, P1Dx = 1.628 Mg m3
a = 10.6656 (3) ÅMo Kα radiation, λ = 0.71073 Å
b = 12.4599 (4) ÅCell parameters from 9267 reflections
c = 14.7567 (5) Åθ = 2.7–29.1°
α = 98.635 (3)°µ = 0.74 mm1
β = 101.650 (3)°T = 150 K
γ = 97.962 (3)°Prism, green
V = 1869.79 (11) Å30.16 × 0.14 × 0.04 mm
Data collection top
Xcalibur, Atlas, Gemini ultra
diffractometer
7652 independent reflections
Radiation source: fine-focus sealed X-ray tube6228 reflections with I > 2σ(I)
Detector resolution: 10.4186 pixels mm-1Rint = 0.047
ω scansθmax = 26.4°, θmin = 2.4°
Absorption correction: multi-scan
CrysAlisPro 1.171.38.43f (Rigaku Oxford Diffraction, 2015) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
h = 1313
Tmin = 0.872, Tmax = 1.000k = 1515
30117 measured reflectionsl = 1818
Refinement top
Refinement on F26 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.062H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.146 w = 1/[σ2(Fo2) + (0.0465P)2 + 5.4285P]
where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
7652 reflectionsΔρmax = 2.66 e Å3
574 parametersΔρmin = 0.96 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Cu10.80693 (5)0.59291 (4)0.72850 (3)0.02945 (14)
Cl10.65710 (11)0.44407 (8)0.64770 (9)0.0453 (3)
N10.9206 (3)0.6624 (2)0.6371 (2)0.0235 (6)
N20.9477 (3)0.5012 (2)0.7378 (2)0.0315 (7)
N30.6759 (3)0.6933 (2)0.7280 (2)0.0272 (7)
N40.8866 (3)0.6936 (2)0.8594 (2)0.0268 (7)
N50.7191 (3)0.4503 (3)0.9373 (2)0.0292 (7)
N60.4294 (3)0.2271 (3)0.6050 (3)0.0375 (8)
O10.6939 (3)0.7840 (2)1.14046 (19)0.0417 (7)
O20.5215 (3)0.8558 (2)1.09077 (19)0.0366 (7)
O30.3435 (3)0.8260 (3)0.9576 (2)0.0537 (9)
H3A0.4017650.8307201.0044920.081*
O40.2514 (3)0.7049 (2)0.8308 (2)0.0413 (7)
O50.6863 (3)0.3581 (2)0.8892 (2)0.0443 (7)
O60.8243 (3)0.4833 (3)0.9911 (2)0.0456 (8)
O70.7003 (3)0.0488 (3)0.40834 (19)0.0391 (7)
H7A0.7302980.0173430.3668220.059*
O80.8236 (3)0.0403 (3)0.4995 (2)0.0481 (8)
O90.9796 (3)0.0931 (2)0.6693 (2)0.0418 (7)
H91.0452330.0657650.6816510.063*
O100.8888 (3)0.0446 (2)0.7309 (2)0.0442 (7)
O110.3919 (3)0.2415 (3)0.5241 (2)0.0539 (9)
O120.3815 (3)0.2596 (3)0.6703 (2)0.0537 (9)
O130.7923 (3)0.0385 (2)0.27223 (18)0.0332 (6)
O140.1201 (3)0.8826 (2)0.8133 (2)0.0438 (7)
C10.9062 (4)0.7415 (3)0.5861 (3)0.0272 (8)
H10.8400750.7817630.5916920.033*
C20.9854 (4)0.7669 (3)0.5246 (3)0.0306 (8)
H20.9722490.8232960.4908600.037*
C31.0823 (4)0.7078 (3)0.5146 (3)0.0308 (8)
H31.1348760.7229010.4733300.037*
C41.1017 (3)0.6236 (3)0.5676 (2)0.0247 (7)
C51.0187 (3)0.6049 (3)0.6277 (2)0.0231 (7)
C61.1991 (4)0.5561 (3)0.5604 (3)0.0296 (8)
H61.2537830.5678910.5197240.036*
C71.2126 (4)0.4756 (3)0.6119 (3)0.0299 (8)
H71.2769580.4332850.6064250.036*
C81.0326 (4)0.5189 (3)0.6822 (2)0.0247 (7)
C91.1300 (4)0.4543 (3)0.6743 (2)0.0267 (8)
C101.1389 (4)0.3714 (3)0.7288 (3)0.0343 (9)
H101.2024220.3274890.7263630.041*
C111.0543 (4)0.3554 (3)0.7853 (3)0.0383 (10)
H111.0603380.3010820.8221250.046*
C120.9582 (5)0.4210 (3)0.7879 (3)0.0398 (10)
H120.8998450.4081770.8257100.048*
C130.5683 (4)0.6883 (3)0.6631 (3)0.0378 (9)
H130.5487300.6331570.6098050.045*
C140.4837 (4)0.7627 (4)0.6720 (3)0.0407 (10)
H140.4086850.7564490.6253320.049*
C150.5104 (4)0.8445 (3)0.7486 (3)0.0374 (10)
H150.4543360.8947630.7542180.045*
C160.6235 (4)0.8530 (3)0.8194 (3)0.0289 (8)
C170.7030 (3)0.7741 (3)0.8055 (3)0.0245 (7)
C180.6595 (4)0.9340 (3)0.9035 (3)0.0343 (9)
H180.6070320.9865100.9127960.041*
C190.7677 (4)0.9364 (3)0.9698 (3)0.0358 (9)
H190.7887620.9905341.0237820.043*
C200.8171 (3)0.7755 (3)0.8762 (2)0.0243 (7)
C210.8508 (4)0.8565 (3)0.9582 (3)0.0286 (8)
C220.9629 (4)0.8503 (4)1.0250 (3)0.0380 (9)
H220.9890330.9011911.0811220.046*
C231.0330 (4)0.7692 (4)1.0069 (3)0.0388 (10)
H231.1084370.7658641.0501110.047*
C240.9921 (4)0.6915 (3)0.9241 (3)0.0347 (9)
H241.0403450.6360140.9137080.042*
C250.5934 (4)0.7833 (3)1.0821 (3)0.0274 (8)
C260.5566 (3)0.6900 (3)0.9963 (2)0.0232 (7)
C270.6442 (3)0.6169 (3)0.9987 (2)0.0238 (7)
H270.7168720.6295741.0484100.029*
C280.6247 (3)0.5264 (3)0.9289 (2)0.0240 (7)
C290.5211 (4)0.5043 (3)0.8522 (3)0.0269 (8)
H290.5097410.4429060.8050140.032*
C300.4346 (3)0.5774 (3)0.8483 (3)0.0264 (8)
H300.3643980.5648020.7968180.032*
C310.4485 (3)0.6697 (3)0.9189 (2)0.0230 (7)
C320.3396 (4)0.7378 (3)0.9003 (3)0.0292 (8)
C330.7497 (3)0.0223 (3)0.4886 (3)0.0259 (8)
C340.6994 (4)0.0778 (3)0.5686 (3)0.0265 (8)
C350.5912 (3)0.1274 (3)0.5499 (3)0.0266 (8)
H350.5526020.1317860.4884120.032*
C360.5413 (4)0.1707 (3)0.6248 (3)0.0314 (8)
C370.5912 (4)0.1631 (3)0.7158 (3)0.0361 (9)
H370.5528870.1895500.7640130.043*
C380.7008 (4)0.1147 (3)0.7341 (3)0.0349 (9)
H380.7371740.1092150.7956990.042*
C390.7574 (4)0.0741 (3)0.6620 (3)0.0279 (8)
C400.8824 (4)0.0323 (3)0.6893 (3)0.0316 (9)
H13A0.809 (4)0.012 (2)0.242 (2)0.050*
H13B0.752 (4)0.094 (2)0.2307 (19)0.050*
H14A0.0435 (18)0.868 (3)0.779 (3)0.050*
H14B0.147 (3)0.8214 (16)0.812 (3)0.050*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Cu10.0365 (3)0.0218 (2)0.0344 (3)0.01380 (19)0.0124 (2)0.00493 (18)
Cl10.0456 (6)0.0267 (5)0.0617 (7)0.0020 (4)0.0200 (5)0.0012 (5)
N10.0255 (15)0.0179 (14)0.0250 (15)0.0060 (12)0.0020 (12)0.0005 (11)
N20.047 (2)0.0222 (16)0.0346 (18)0.0181 (14)0.0190 (16)0.0084 (13)
N30.0306 (17)0.0239 (16)0.0284 (16)0.0085 (13)0.0064 (13)0.0060 (12)
N40.0276 (16)0.0281 (16)0.0307 (16)0.0150 (13)0.0107 (13)0.0090 (13)
N50.0344 (18)0.0272 (17)0.0332 (17)0.0146 (14)0.0149 (15)0.0103 (14)
N60.0267 (17)0.0346 (19)0.052 (2)0.0063 (14)0.0120 (17)0.0044 (16)
O10.0488 (18)0.0384 (16)0.0301 (15)0.0198 (14)0.0084 (13)0.0056 (12)
O20.0417 (16)0.0337 (15)0.0333 (15)0.0218 (13)0.0037 (13)0.0049 (12)
O30.048 (2)0.054 (2)0.050 (2)0.0371 (16)0.0129 (15)0.0102 (16)
O40.0310 (15)0.0471 (18)0.0409 (17)0.0171 (13)0.0064 (13)0.0033 (13)
O50.0484 (18)0.0277 (15)0.059 (2)0.0181 (13)0.0160 (15)0.0022 (14)
O60.0360 (17)0.0437 (18)0.0537 (19)0.0233 (14)0.0035 (15)0.0016 (14)
O70.0406 (16)0.0513 (18)0.0278 (14)0.0229 (14)0.0068 (13)0.0025 (13)
O80.068 (2)0.0463 (18)0.0363 (16)0.0354 (17)0.0102 (15)0.0045 (14)
O90.0322 (16)0.0346 (16)0.063 (2)0.0118 (13)0.0118 (15)0.0147 (14)
O100.0450 (18)0.0430 (18)0.0487 (18)0.0165 (14)0.0037 (14)0.0228 (15)
O110.0344 (17)0.074 (2)0.052 (2)0.0242 (16)0.0008 (15)0.0077 (17)
O120.0471 (19)0.059 (2)0.066 (2)0.0268 (16)0.0304 (17)0.0074 (17)
O130.0327 (15)0.0352 (15)0.0276 (14)0.0095 (12)0.0002 (12)0.0018 (11)
O140.0399 (17)0.0450 (18)0.0449 (18)0.0177 (14)0.0043 (14)0.0129 (14)
C10.0289 (19)0.0209 (18)0.0291 (19)0.0088 (15)0.0010 (15)0.0025 (14)
C20.035 (2)0.0217 (18)0.033 (2)0.0042 (16)0.0002 (17)0.0080 (15)
C30.032 (2)0.028 (2)0.030 (2)0.0009 (16)0.0056 (16)0.0041 (15)
C40.0234 (18)0.0216 (17)0.0245 (18)0.0036 (14)0.0014 (14)0.0011 (14)
C50.0253 (18)0.0181 (16)0.0222 (17)0.0063 (14)0.0001 (14)0.0026 (13)
C60.0260 (19)0.030 (2)0.0280 (19)0.0029 (15)0.0032 (15)0.0031 (15)
C70.0275 (19)0.029 (2)0.031 (2)0.0132 (16)0.0017 (16)0.0038 (15)
C80.0307 (19)0.0176 (17)0.0245 (18)0.0084 (14)0.0039 (15)0.0011 (13)
C90.033 (2)0.0214 (18)0.0241 (18)0.0123 (15)0.0014 (15)0.0018 (14)
C100.044 (2)0.028 (2)0.034 (2)0.0212 (18)0.0066 (18)0.0021 (16)
C110.057 (3)0.029 (2)0.038 (2)0.0239 (19)0.016 (2)0.0125 (17)
C120.056 (3)0.032 (2)0.046 (2)0.025 (2)0.029 (2)0.0156 (19)
C130.041 (2)0.032 (2)0.037 (2)0.0049 (18)0.0011 (19)0.0077 (17)
C140.028 (2)0.042 (2)0.051 (3)0.0063 (18)0.0032 (19)0.020 (2)
C150.029 (2)0.036 (2)0.056 (3)0.0160 (17)0.0131 (19)0.023 (2)
C160.0290 (19)0.0255 (19)0.041 (2)0.0129 (15)0.0155 (17)0.0149 (16)
C170.0282 (19)0.0201 (17)0.0289 (19)0.0091 (14)0.0096 (15)0.0072 (14)
C180.042 (2)0.0239 (19)0.046 (2)0.0180 (17)0.022 (2)0.0069 (17)
C190.054 (3)0.0224 (19)0.035 (2)0.0140 (18)0.016 (2)0.0017 (16)
C200.0294 (19)0.0229 (18)0.0256 (18)0.0110 (15)0.0111 (15)0.0072 (14)
C210.033 (2)0.0286 (19)0.0268 (19)0.0075 (16)0.0102 (16)0.0070 (15)
C220.045 (2)0.038 (2)0.028 (2)0.0023 (19)0.0048 (18)0.0067 (17)
C230.030 (2)0.052 (3)0.037 (2)0.0120 (19)0.0030 (18)0.017 (2)
C240.031 (2)0.042 (2)0.040 (2)0.0185 (18)0.0131 (18)0.0165 (18)
C250.0291 (19)0.0273 (19)0.0260 (19)0.0086 (15)0.0061 (16)0.0024 (15)
C260.0259 (18)0.0240 (18)0.0222 (17)0.0107 (14)0.0061 (14)0.0050 (14)
C270.0240 (18)0.0269 (18)0.0215 (17)0.0089 (15)0.0027 (14)0.0067 (14)
C280.0269 (18)0.0219 (17)0.0284 (18)0.0095 (14)0.0111 (15)0.0093 (14)
C290.032 (2)0.0233 (18)0.0253 (18)0.0031 (15)0.0102 (16)0.0010 (14)
C300.0247 (18)0.0288 (19)0.0240 (18)0.0050 (15)0.0023 (15)0.0038 (15)
C310.0235 (18)0.0241 (18)0.0239 (18)0.0084 (14)0.0061 (14)0.0073 (14)
C320.0272 (19)0.032 (2)0.033 (2)0.0124 (16)0.0078 (17)0.0107 (16)
C330.0252 (18)0.0201 (17)0.0287 (19)0.0046 (14)0.0008 (15)0.0013 (14)
C340.0268 (18)0.0207 (18)0.0304 (19)0.0029 (14)0.0052 (15)0.0024 (14)
C350.0243 (18)0.0217 (18)0.0297 (19)0.0021 (14)0.0019 (15)0.0001 (14)
C360.029 (2)0.0249 (19)0.042 (2)0.0056 (16)0.0119 (17)0.0050 (16)
C370.045 (2)0.029 (2)0.038 (2)0.0077 (18)0.0189 (19)0.0024 (17)
C380.040 (2)0.034 (2)0.030 (2)0.0073 (18)0.0057 (18)0.0057 (17)
C390.032 (2)0.0191 (17)0.031 (2)0.0055 (15)0.0027 (16)0.0039 (14)
C400.038 (2)0.029 (2)0.0249 (19)0.0094 (17)0.0005 (16)0.0009 (15)
Geometric parameters (Å, º) top
Cu1—N31.999 (3)C7—C91.425 (6)
Cu1—N22.004 (3)C8—C91.413 (5)
Cu1—N42.083 (3)C9—C101.404 (5)
Cu1—N12.181 (3)C10—C111.362 (6)
Cu1—Cl12.2716 (12)C11—C121.399 (5)
N1—C11.333 (4)C13—C141.391 (6)
N1—C51.365 (4)C14—C151.357 (6)
N2—C121.333 (5)C15—C161.407 (6)
N2—C81.356 (5)C16—C171.403 (5)
N3—C131.326 (5)C16—C181.425 (6)
N3—C171.358 (5)C17—C201.430 (5)
N4—C241.327 (5)C18—C191.348 (6)
N4—C201.364 (4)C19—C211.435 (5)
N5—O61.214 (4)C20—C211.404 (5)
N5—O51.221 (4)C21—C221.407 (6)
N5—C281.475 (4)C22—C231.364 (6)
N6—O121.222 (4)C23—C241.391 (6)
N6—O111.228 (5)C25—C261.530 (5)
N6—C361.469 (5)C26—C271.392 (5)
O1—C251.230 (5)C26—C311.413 (5)
O2—C251.272 (4)C27—C281.370 (5)
O3—C321.272 (5)C28—C291.377 (5)
O4—C321.217 (5)C29—C301.382 (5)
O7—C331.305 (4)C30—C311.400 (5)
O8—C331.188 (4)C31—C321.536 (5)
O9—C401.307 (5)C33—C341.508 (5)
O10—C401.214 (5)C34—C351.382 (5)
C1—C21.400 (6)C34—C391.401 (5)
C2—C31.368 (5)C35—C361.391 (5)
C3—C41.413 (5)C36—C371.364 (6)
C4—C51.394 (5)C37—C381.386 (6)
C4—C61.435 (5)C38—C391.391 (5)
C5—C81.440 (5)C39—C401.501 (5)
C6—C71.353 (5)
N3—Cu1—N2175.33 (14)C17—C16—C18119.0 (3)
N3—Cu1—N481.03 (12)C15—C16—C18124.3 (3)
N2—Cu1—N494.45 (12)N3—C17—C16123.2 (3)
N3—Cu1—N1100.14 (12)N3—C17—C20117.2 (3)
N2—Cu1—N179.70 (12)C16—C17—C20119.6 (3)
N4—Cu1—N1103.22 (11)C19—C18—C16121.6 (3)
N3—Cu1—Cl193.50 (10)C18—C19—C21120.9 (4)
N2—Cu1—Cl190.89 (10)N4—C20—C21123.5 (3)
N4—Cu1—Cl1145.50 (9)N4—C20—C17116.2 (3)
N1—Cu1—Cl1111.26 (8)C21—C20—C17120.3 (3)
C1—N1—C5116.9 (3)C20—C21—C22116.6 (3)
C1—N1—Cu1132.8 (2)C20—C21—C19118.6 (3)
C5—N1—Cu1110.1 (2)C22—C21—C19124.8 (4)
C12—N2—C8118.6 (3)C23—C22—C21119.5 (4)
C12—N2—Cu1125.7 (3)C22—C23—C24120.2 (4)
C8—N2—Cu1115.5 (2)N4—C24—C23122.4 (4)
C13—N3—C17118.2 (3)O1—C25—O2122.8 (3)
C13—N3—Cu1127.9 (3)O1—C25—C26117.0 (3)
C17—N3—Cu1114.0 (2)O2—C25—C26120.1 (3)
C24—N4—C20117.8 (3)C27—C26—C31118.3 (3)
C24—N4—Cu1130.6 (3)C27—C26—C25112.7 (3)
C20—N4—Cu1111.5 (2)C31—C26—C25129.0 (3)
O6—N5—O5124.1 (3)C28—C27—C26120.8 (3)
O6—N5—C28118.1 (3)C27—C28—C29122.5 (3)
O5—N5—C28117.7 (3)C27—C28—N5118.1 (3)
O12—N6—O11124.0 (4)C29—C28—N5119.4 (3)
O12—N6—C36118.1 (4)C28—C29—C30117.1 (3)
O11—N6—C36117.9 (3)C29—C30—C31122.6 (3)
N1—C1—C2123.4 (3)C30—C31—C26118.7 (3)
C3—C2—C1119.2 (3)C30—C31—C32113.3 (3)
C2—C3—C4119.4 (4)C26—C31—C32128.0 (3)
C5—C4—C3117.2 (3)O4—C32—O3122.0 (3)
C5—C4—C6119.6 (3)O4—C32—C31118.5 (3)
C3—C4—C6123.2 (4)O3—C32—C31119.5 (3)
N1—C5—C4123.8 (3)O8—C33—O7125.4 (4)
N1—C5—C8116.6 (3)O8—C33—C34122.2 (3)
C4—C5—C8119.6 (3)O7—C33—C34112.4 (3)
C7—C6—C4120.9 (4)C35—C34—C39119.6 (3)
C6—C7—C9121.3 (3)C35—C34—C33119.9 (3)
N2—C8—C9122.4 (3)C39—C34—C33120.4 (3)
N2—C8—C5117.9 (3)C34—C35—C36118.6 (3)
C9—C8—C5119.7 (3)C37—C36—C35123.1 (4)
C10—C9—C8117.2 (3)C37—C36—N6118.4 (4)
C10—C9—C7123.7 (3)C35—C36—N6118.5 (4)
C8—C9—C7119.1 (3)C36—C37—C38117.8 (4)
C11—C10—C9119.8 (3)C37—C38—C39121.2 (4)
C10—C11—C12119.8 (4)C38—C39—C34119.5 (3)
N2—C12—C11122.2 (4)C38—C39—C40117.4 (3)
N3—C13—C14122.2 (4)C34—C39—C40123.0 (3)
C15—C14—C13120.2 (4)O10—C40—O9126.4 (4)
C14—C15—C16119.6 (4)O10—C40—C39121.6 (4)
C17—C16—C15116.6 (4)O9—C40—C39111.8 (3)
 

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