The title compounds, C
19H
21NO
3 and C
31H
29NO
3, are derivatives of α-aminoisobutyric acid, with benzyl and dibenzyl substitution. The pseudo-peptide formed by the
N-formyl and ethyl ester substitution at the C
α position switches from a
trans–
trans to a
trans–
cis configuration as a result of biphenyl substitution. The packing of the compounds is stabilized by N—H
O and C—H
O hydrogen bonds.
Supporting information
CCDC references: 245928; 245929
Reaction of benzyl bromide, 1, with ethyl isocyanoacetate in the presence of a phase-transfer catalyst, such as tetrabutylammonium sulfate in acetonitrile/potassium carbonate, gave a coupling product. Hydrolysis of the coupling product with concentrated HCl in the presence of diethyl ether gave the formyl derivative 2(I).
Similarly, compound 4 was prepared from p-iodobenzyl bromide, 3. A Suzuki–Miyaura coupling reaction (Kotha et al., 2002) of 4 with benzene boronic acid in the presence of Pd(0) as catalyst gave the cross-coupling product 5(II).
H atoms were positioned geometrically and treated as riding, with C—H distances of 0.93–0.97 Å.
For both compounds, data collection: SMART (Bruker, 1999); cell refinement: SAINT (Bruker, 1999); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997). Molecular graphics: ORTEP-3 (Farrugia, 1997) for (I); ORTEP-3 (Farrugia,1997) for (II). For both compounds, software used to prepare material for publication: reference?.
(I) ethyl 2-benzyl-2-(formylamino)-3-phenylpropionate
top
Crystal data top
C19H21NO3 | F(000) = 664 |
Mr = 311.37 | Dx = 1.203 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 9.980 (2) Å | Cell parameters from 3802 reflections |
b = 11.853 (3) Å | θ = 2.1–27.9° |
c = 14.575 (4) Å | µ = 0.08 mm−1 |
β = 94.147 (4)° | T = 293 K |
V = 1719.6 (7) Å3 | Rectangle, colorless |
Z = 4 | 0.52 × 0.43 × 0.42 mm |
Data collection top
Bruker SMART CCD area-detector diffractometer | 2295 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.023 |
Graphite monochromator | θmax = 27.9°, θmin = 2.1° |
ω scans | h = −12→12 |
13797 measured reflections | k = −13→15 |
3802 independent reflections | l = −18→19 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.062 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.161 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0598P)2 + 0.3098P] where P = (Fo2 + 2Fc2)/3 |
3802 reflections | (Δ/σ)max < 0.001 |
245 parameters | Δρmax = 0.22 e Å−3 |
75 restraints | Δρmin = −0.11 e Å−3 |
Crystal data top
C19H21NO3 | V = 1719.6 (7) Å3 |
Mr = 311.37 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 9.980 (2) Å | µ = 0.08 mm−1 |
b = 11.853 (3) Å | T = 293 K |
c = 14.575 (4) Å | 0.52 × 0.43 × 0.42 mm |
β = 94.147 (4)° | |
Data collection top
Bruker SMART CCD area-detector diffractometer | 2295 reflections with I > 2σ(I) |
13797 measured reflections | Rint = 0.023 |
3802 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.062 | 75 restraints |
wR(F2) = 0.161 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.22 e Å−3 |
3802 reflections | Δρmin = −0.11 e Å−3 |
245 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
N1 | 0.94081 (17) | 0.02619 (13) | 0.11843 (11) | 0.0687 (4) | |
H1 | 0.9129 | −0.0023 | 0.0662 | 0.082* | |
C1 | 0.8930 (2) | 0.13885 (16) | 0.13822 (13) | 0.0694 (5) | |
C2 | 1.0089 (2) | 0.22513 (17) | 0.15058 (13) | 0.0762 (6) | |
H2A | 0.9721 | 0.2967 | 0.1690 | 0.091* | |
H2B | 1.0713 | 0.1997 | 0.2004 | 0.091* | |
C3 | 1.0855 (2) | 0.24453 (17) | 0.06752 (13) | 0.0726 (6) | |
C4 | 1.0566 (3) | 0.3356 (2) | 0.00986 (17) | 0.0964 (7) | |
H4 | 0.9883 | 0.3851 | 0.0231 | 0.116* | |
C5 | 1.1266 (4) | 0.3546 (3) | −0.0662 (2) | 0.1171 (10) | |
H5 | 1.1055 | 0.4165 | −0.1037 | 0.141* | |
C6 | 1.2266 (4) | 0.2836 (3) | −0.0871 (2) | 0.1218 (11) | |
H6 | 1.2735 | 0.2964 | −0.1389 | 0.146* | |
C7 | 1.2583 (3) | 0.1924 (3) | −0.0311 (2) | 0.1095 (9) | |
H7 | 1.3269 | 0.1435 | −0.0450 | 0.131* | |
C8 | 1.1881 (2) | 0.1737 (2) | 0.04559 (17) | 0.0846 (6) | |
H8 | 1.2104 | 0.1122 | 0.0833 | 0.102* | |
C9 | 0.8149 (2) | 0.1401 (2) | 0.22613 (14) | 0.0833 (6) | |
H9A | 0.8782 | 0.1267 | 0.2787 | 0.100* | |
H9B | 0.7777 | 0.2149 | 0.2331 | 0.100* | |
C10 | 0.7033 (2) | 0.0559 (2) | 0.22873 (15) | 0.0822 (6) | |
C11 | 0.5783 (3) | 0.0752 (3) | 0.1857 (2) | 0.1253 (11) | |
H11 | 0.5613 | 0.1421 | 0.1537 | 0.150* | |
C12 | 0.4777 (3) | −0.0045 (4) | 0.1897 (3) | 0.1571 (15) | |
H12 | 0.3939 | 0.0089 | 0.1595 | 0.189* | |
C13 | 0.4997 (4) | −0.1021 (3) | 0.2372 (3) | 0.1368 (12) | |
H13 | 0.4312 | −0.1549 | 0.2402 | 0.164* | |
C14 | 0.6208 (3) | −0.1216 (3) | 0.2795 (2) | 0.1155 (9) | |
H14 | 0.6363 | −0.1882 | 0.3123 | 0.139* | |
C15 | 0.7218 (3) | −0.0449 (2) | 0.27529 (16) | 0.0951 (7) | |
H15 | 0.8055 | −0.0610 | 0.3046 | 0.114* | |
C19 | 1.0230 (2) | −0.03744 (18) | 0.17235 (16) | 0.0771 (6) | |
H19 | 1.0396 | −0.1100 | 0.1518 | 0.092* | |
O19 | 1.07822 (18) | −0.01026 (14) | 0.24543 (11) | 0.0981 (5) | |
O16A | 0.7888 (15) | 0.1211 (13) | −0.0176 (10) | 0.093 (3) | 0.600 (10) |
O17A | 0.7356 (13) | 0.2660 (7) | 0.0722 (6) | 0.099 (3) | 0.600 (10) |
C17A | 0.6556 (9) | 0.3017 (6) | −0.0170 (6) | 0.129 (3) | 0.600 (10) |
H17A | 0.7139 | 0.3037 | −0.0674 | 0.155* | 0.600 (10) |
H17B | 0.5839 | 0.2482 | −0.0323 | 0.155* | 0.600 (10) |
C18A | 0.6015 (9) | 0.4100 (6) | −0.0029 (5) | 0.157 (3) | 0.600 (10) |
H18A | 0.5524 | 0.4349 | −0.0583 | 0.236* | 0.600 (10) |
H18B | 0.6732 | 0.4621 | 0.0131 | 0.236* | 0.600 (10) |
H18C | 0.5424 | 0.4068 | 0.0461 | 0.236* | 0.600 (10) |
O16B | 0.768 (2) | 0.102 (2) | −0.0034 (16) | 0.109 (6) | 0.400 (10) |
O17B | 0.764 (2) | 0.2805 (11) | 0.0540 (9) | 0.095 (4) | 0.400 (10) |
C17B | 0.7013 (10) | 0.3533 (10) | −0.0286 (8) | 0.121 (4) | 0.400 (10) |
H17C | 0.7094 | 0.4339 | −0.0182 | 0.145* | 0.400 (10) |
H17D | 0.7345 | 0.3330 | −0.0873 | 0.145* | 0.400 (10) |
C18B | 0.5724 (12) | 0.3114 (14) | −0.0168 (13) | 0.181 (6) | 0.400 (10) |
H18D | 0.5096 | 0.3434 | −0.0626 | 0.272* | 0.400 (10) |
H18E | 0.5467 | 0.3315 | 0.0433 | 0.272* | 0.400 (10) |
H18F | 0.5726 | 0.2308 | −0.0229 | 0.272* | 0.400 (10) |
C16 | 0.8006 (3) | 0.1710 (2) | 0.05443 (16) | 0.0856 (6) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.0823 (11) | 0.0583 (10) | 0.0642 (9) | 0.0016 (8) | −0.0033 (8) | −0.0096 (7) |
C1 | 0.0820 (13) | 0.0596 (12) | 0.0649 (11) | 0.0089 (10) | −0.0068 (10) | −0.0094 (9) |
C2 | 0.1028 (16) | 0.0564 (12) | 0.0666 (12) | 0.0025 (11) | −0.0125 (11) | −0.0096 (9) |
C3 | 0.0919 (15) | 0.0547 (11) | 0.0679 (12) | −0.0077 (11) | −0.0155 (11) | −0.0071 (9) |
C4 | 0.124 (2) | 0.0728 (15) | 0.0894 (16) | −0.0034 (14) | −0.0121 (15) | 0.0065 (12) |
C5 | 0.158 (3) | 0.104 (2) | 0.0858 (18) | −0.032 (2) | −0.0193 (19) | 0.0191 (16) |
C6 | 0.148 (3) | 0.128 (3) | 0.0898 (19) | −0.054 (2) | 0.0136 (19) | −0.014 (2) |
C7 | 0.1014 (19) | 0.103 (2) | 0.125 (2) | −0.0274 (17) | 0.0171 (18) | −0.0279 (19) |
C8 | 0.0876 (15) | 0.0701 (14) | 0.0940 (16) | −0.0099 (13) | −0.0084 (13) | −0.0072 (12) |
C9 | 0.0920 (15) | 0.0839 (15) | 0.0735 (13) | 0.0174 (13) | 0.0013 (11) | −0.0122 (11) |
C10 | 0.0761 (14) | 0.0919 (16) | 0.0784 (13) | 0.0168 (13) | 0.0045 (11) | −0.0017 (12) |
C11 | 0.091 (2) | 0.124 (2) | 0.158 (3) | 0.0212 (18) | −0.0131 (18) | 0.038 (2) |
C12 | 0.077 (2) | 0.180 (4) | 0.209 (4) | −0.003 (2) | −0.029 (2) | 0.058 (3) |
C13 | 0.103 (2) | 0.149 (3) | 0.158 (3) | −0.018 (2) | 0.000 (2) | 0.043 (2) |
C14 | 0.097 (2) | 0.129 (2) | 0.121 (2) | 0.0028 (19) | 0.0157 (17) | 0.0367 (18) |
C15 | 0.0809 (16) | 0.118 (2) | 0.0870 (15) | 0.0158 (15) | 0.0069 (12) | 0.0233 (14) |
C19 | 0.0913 (15) | 0.0596 (12) | 0.0805 (14) | 0.0052 (11) | 0.0078 (12) | 0.0004 (11) |
O19 | 0.1191 (14) | 0.0879 (11) | 0.0836 (10) | 0.0134 (9) | −0.0189 (10) | 0.0019 (8) |
O16A | 0.107 (4) | 0.104 (7) | 0.066 (3) | 0.021 (5) | −0.012 (2) | −0.017 (4) |
O17A | 0.109 (5) | 0.083 (3) | 0.099 (5) | 0.031 (3) | −0.021 (4) | 0.003 (3) |
C17A | 0.111 (6) | 0.100 (5) | 0.170 (7) | 0.018 (5) | −0.047 (6) | 0.020 (4) |
C18A | 0.166 (7) | 0.120 (5) | 0.181 (6) | 0.041 (5) | −0.022 (5) | 0.035 (5) |
O16B | 0.144 (11) | 0.085 (5) | 0.089 (10) | −0.010 (5) | −0.048 (8) | −0.003 (5) |
O17B | 0.126 (9) | 0.094 (5) | 0.064 (3) | 0.037 (5) | 0.006 (4) | 0.011 (3) |
C17B | 0.138 (8) | 0.093 (7) | 0.136 (6) | 0.010 (6) | 0.043 (6) | −0.004 (5) |
C18B | 0.124 (8) | 0.157 (14) | 0.265 (15) | −0.003 (9) | 0.023 (11) | −0.045 (10) |
C16 | 0.0939 (16) | 0.0827 (16) | 0.0776 (15) | 0.0151 (14) | −0.0125 (12) | −0.0067 (12) |
Geometric parameters (Å, º) top
N1—C19 | 1.329 (3) | C12—C13 | 1.357 (5) |
N1—C1 | 1.454 (2) | C12—H12 | 0.9300 |
N1—H1 | 0.8600 | C13—C14 | 1.337 (4) |
C1—C16 | 1.524 (3) | C13—H13 | 0.9300 |
C1—C2 | 1.545 (3) | C14—C15 | 1.362 (4) |
C1—C9 | 1.547 (3) | C14—H14 | 0.9300 |
C2—C3 | 1.495 (3) | C15—H15 | 0.9300 |
C2—H2A | 0.9700 | C19—O19 | 1.207 (2) |
C2—H2B | 0.9700 | C19—H19 | 0.9300 |
C3—C8 | 1.379 (3) | O16A—C16 | 1.203 (14) |
C3—C4 | 1.386 (3) | O17A—C16 | 1.334 (7) |
C4—C5 | 1.371 (4) | O17A—C17A | 1.535 (9) |
C4—H4 | 0.9300 | C17A—C18A | 1.414 (9) |
C5—C6 | 1.356 (4) | C17A—H17A | 0.9700 |
C5—H5 | 0.9300 | C17A—H17B | 0.9700 |
C6—C7 | 1.377 (4) | C18A—H18A | 0.9600 |
C6—H6 | 0.9300 | C18A—H18B | 0.9600 |
C7—C8 | 1.379 (4) | C18A—H18C | 0.9600 |
C7—H7 | 0.9300 | O16B—C16 | 1.21 (2) |
C8—H8 | 0.9300 | O17B—C16 | 1.350 (10) |
C9—C10 | 1.498 (3) | O17B—C17B | 1.572 (11) |
C9—H9A | 0.9700 | C17B—C18B | 1.401 (11) |
C9—H9B | 0.9700 | C17B—H17C | 0.9700 |
C10—C11 | 1.375 (3) | C17B—H17D | 0.9700 |
C10—C15 | 1.381 (3) | C18B—H18D | 0.9600 |
C11—C12 | 1.383 (5) | C18B—H18E | 0.9600 |
C11—H11 | 0.9300 | C18B—H18F | 0.9600 |
| | | |
C19—N1—C1 | 126.96 (17) | C14—C13—C12 | 119.3 (3) |
C19—N1—H1 | 116.5 | C14—C13—H13 | 120.3 |
C1—N1—H1 | 116.5 | C12—C13—H13 | 120.3 |
N1—C1—C16 | 104.98 (16) | C13—C14—C15 | 120.7 (3) |
N1—C1—C2 | 112.18 (16) | C13—C14—H14 | 119.6 |
C16—C1—C2 | 109.42 (18) | C15—C14—H14 | 119.6 |
N1—C1—C9 | 111.41 (17) | C14—C15—C10 | 121.8 (2) |
C16—C1—C9 | 110.46 (18) | C14—C15—H15 | 119.1 |
C2—C1—C9 | 108.36 (16) | C10—C15—H15 | 119.1 |
C3—C2—C1 | 115.45 (15) | O19—C19—N1 | 126.4 (2) |
C3—C2—H2A | 108.4 | O19—C19—H19 | 116.8 |
C1—C2—H2A | 108.4 | N1—C19—H19 | 116.8 |
C3—C2—H2B | 108.4 | C16—O17A—C17A | 107.4 (7) |
C1—C2—H2B | 108.4 | C18A—C17A—O17A | 107.9 (6) |
H2A—C2—H2B | 107.5 | C18A—C17A—H17A | 110.1 |
C8—C3—C4 | 117.3 (2) | O17A—C17A—H17A | 110.1 |
C8—C3—C2 | 121.7 (2) | C18A—C17A—H17B | 110.1 |
C4—C3—C2 | 121.0 (2) | O17A—C17A—H17B | 110.1 |
C5—C4—C3 | 121.5 (3) | H17A—C17A—H17B | 108.4 |
C5—C4—H4 | 119.2 | C17A—C18A—H18A | 109.5 |
C3—C4—H4 | 119.2 | C17A—C18A—H18B | 109.5 |
C6—C5—C4 | 120.4 (3) | H18A—C18A—H18B | 109.5 |
C6—C5—H5 | 119.8 | C17A—C18A—H18C | 109.5 |
C4—C5—H5 | 119.8 | H18A—C18A—H18C | 109.5 |
C5—C6—C7 | 119.7 (3) | H18B—C18A—H18C | 109.5 |
C5—C6—H6 | 120.1 | C16—O17B—C17B | 128.7 (12) |
C7—C6—H6 | 120.1 | C18B—C17B—O17B | 91.6 (14) |
C6—C7—C8 | 119.8 (3) | C18B—C17B—H17C | 113.4 |
C6—C7—H7 | 120.1 | O17B—C17B—H17C | 113.4 |
C8—C7—H7 | 120.1 | C18B—C17B—H17D | 113.4 |
C3—C8—C7 | 121.3 (2) | O17B—C17B—H17D | 113.4 |
C3—C8—H8 | 119.3 | H17C—C17B—H17D | 110.7 |
C7—C8—H8 | 119.3 | C17B—C18B—H18D | 109.5 |
C10—C9—C1 | 115.78 (17) | C17B—C18B—H18E | 109.5 |
C10—C9—H9A | 108.3 | H18D—C18B—H18E | 109.5 |
C1—C9—H9A | 108.3 | C17B—C18B—H18F | 109.5 |
C10—C9—H9B | 108.3 | H18D—C18B—H18F | 109.5 |
C1—C9—H9B | 108.3 | H18E—C18B—H18F | 109.5 |
H9A—C9—H9B | 107.4 | O16A—C16—O16B | 18 (2) |
C11—C10—C15 | 116.9 (3) | O16A—C16—O17A | 124.4 (8) |
C11—C10—C9 | 122.0 (2) | O16B—C16—O17A | 126.8 (12) |
C15—C10—C9 | 121.0 (2) | O16A—C16—O17B | 117.3 (10) |
C10—C11—C12 | 120.3 (3) | O16B—C16—O17B | 126.3 (14) |
C10—C11—H11 | 119.8 | O17A—C16—O17B | 18.7 (12) |
C12—C11—H11 | 119.8 | O16A—C16—C1 | 126.3 (7) |
C13—C12—C11 | 120.8 (3) | O16B—C16—C1 | 120.6 (12) |
C13—C12—H12 | 119.6 | O17A—C16—C1 | 109.3 (4) |
C11—C12—H12 | 119.6 | O17B—C16—C1 | 113.2 (7) |
| | | |
C19—N1—C1—C16 | −179.1 (2) | C13—C14—C15—C10 | 1.0 (5) |
C19—N1—C1—C2 | 62.2 (3) | C11—C10—C15—C14 | −0.7 (4) |
C19—N1—C1—C9 | −59.5 (3) | C9—C10—C15—C14 | 179.0 (2) |
N1—C1—C2—C3 | 63.3 (2) | C1—N1—C19—O19 | −4.3 (4) |
C16—C1—C2—C3 | −52.8 (2) | C16—O17A—C17A—C18A | −171.9 (10) |
C9—C1—C2—C3 | −173.30 (17) | C16—O17B—C17B—C18B | 82 (2) |
C1—C2—C3—C8 | −83.0 (2) | C17A—O17A—C16—O16A | −4.4 (16) |
C1—C2—C3—C4 | 97.7 (2) | C17A—O17A—C16—O16B | −26.9 (19) |
C8—C3—C4—C5 | 0.3 (3) | C17A—O17A—C16—O17B | 69 (3) |
C2—C3—C4—C5 | 179.7 (2) | C17A—O17A—C16—C1 | 174.1 (7) |
C3—C4—C5—C6 | 0.2 (4) | C17B—O17B—C16—O16A | 2 (2) |
C4—C5—C6—C7 | −0.4 (4) | C17B—O17B—C16—O16B | −17 (3) |
C5—C6—C7—C8 | 0.2 (4) | C17B—O17B—C16—O17A | −115 (5) |
C4—C3—C8—C7 | −0.6 (3) | C17B—O17B—C16—C1 | 163.3 (14) |
C2—C3—C8—C7 | −179.9 (2) | N1—C1—C16—O16A | −10.9 (11) |
C6—C7—C8—C3 | 0.3 (4) | C2—C1—C16—O16A | 109.7 (10) |
N1—C1—C9—C10 | −52.5 (2) | C9—C1—C16—O16A | −131.1 (10) |
C16—C1—C9—C10 | 63.7 (2) | N1—C1—C16—O16B | 10.0 (14) |
C2—C1—C9—C10 | −176.43 (18) | C2—C1—C16—O16B | 130.6 (14) |
C1—C9—C10—C11 | −81.5 (3) | C9—C1—C16—O16B | −110.2 (14) |
C1—C9—C10—C15 | 98.7 (3) | N1—C1—C16—O17A | 170.5 (7) |
C15—C10—C11—C12 | −0.2 (5) | C2—C1—C16—O17A | −68.9 (7) |
C9—C10—C11—C12 | −179.9 (3) | C9—C1—C16—O17A | 50.3 (7) |
C10—C11—C12—C13 | 1.0 (6) | N1—C1—C16—O17B | −169.9 (9) |
C11—C12—C13—C14 | −0.8 (7) | C2—C1—C16—O17B | −49.3 (9) |
C12—C13—C14—C15 | −0.2 (6) | C9—C1—C16—O17B | 69.9 (9) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O16A | 0.86 | 2.22 | 2.657 (15) | 111 |
N1—H1···O16B | 0.86 | 2.11 | 2.55 (2) | 111 |
C5—H5···O19i | 0.93 | 2.46 | 3.314 (3) | 152 |
C2—H2B···O19 | 0.97 | 2.57 | 3.168 (3) | 119 |
C9—H9A···O19 | 0.97 | 2.64 | 3.170 (3) | 114 |
Symmetry code: (i) x, −y+1/2, z−1/2. |
(II) ethyl 3-(1,1'-biphenyl-4-yl)-2-(formylamino)-2-(4-phenylbenzyl)propionate
top
Crystal data top
C31H29NO3 | F(000) = 984 |
Mr = 463.55 | Dx = 1.230 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 26.761 (5) Å | Cell parameters from 5898 reflections |
b = 10.9424 (19) Å | θ = 2.0–28.0° |
c = 8.5818 (15) Å | µ = 0.08 mm−1 |
β = 95.068 (3)° | T = 293 K |
V = 2503.2 (8) Å3 | Rectangular, colorless |
Z = 4 | 0.54 × 0.45 × 0.45 mm |
Data collection top
Bruker SMART CCD area-detector diffractometer | 2853 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.052 |
Graphite monochromator | θmax = 28.0°, θmin = 2.0° |
ω scans | h = −34→34 |
21471 measured reflections | k = −14→14 |
5898 independent reflections | l = −11→10 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.080 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.161 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0465P)2 + 0.6112P] where P = (Fo2 + 2Fc2)/3 |
5898 reflections | (Δ/σ)max = 0.001 |
316 parameters | Δρmax = 0.19 e Å−3 |
317 restraints | Δρmin = −0.12 e Å−3 |
Crystal data top
C31H29NO3 | V = 2503.2 (8) Å3 |
Mr = 463.55 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 26.761 (5) Å | µ = 0.08 mm−1 |
b = 10.9424 (19) Å | T = 293 K |
c = 8.5818 (15) Å | 0.54 × 0.45 × 0.45 mm |
β = 95.068 (3)° | |
Data collection top
Bruker SMART CCD area-detector diffractometer | 2853 reflections with I > 2σ(I) |
21471 measured reflections | Rint = 0.052 |
5898 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.080 | 317 restraints |
wR(F2) = 0.161 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.19 e Å−3 |
5898 reflections | Δρmin = −0.12 e Å−3 |
316 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.23415 (10) | 1.0037 (2) | 0.4135 (3) | 0.0582 (7) | |
C2 | 0.19373 (11) | 1.0697 (2) | 0.5011 (3) | 0.0723 (8) | |
H2A | 0.1904 | 1.0268 | 0.5986 | 0.087* | |
H2B | 0.2056 | 1.1515 | 0.5272 | 0.087* | |
C3 | 0.14267 (11) | 1.0793 (2) | 0.4142 (3) | 0.0642 (7) | |
C4 | 0.10641 (12) | 0.9919 (3) | 0.4309 (3) | 0.0716 (8) | |
H4 | 0.1139 | 0.9255 | 0.4964 | 0.086* | |
C5 | 0.05962 (12) | 1.0007 (2) | 0.3531 (3) | 0.0719 (8) | |
H5 | 0.0363 | 0.9396 | 0.3675 | 0.086* | |
C6 | 0.04554 (11) | 1.0973 (2) | 0.2533 (3) | 0.0611 (7) | |
C7 | 0.08195 (12) | 1.1851 (2) | 0.2389 (4) | 0.0799 (9) | |
H7 | 0.0743 | 1.2522 | 0.1747 | 0.096* | |
C8 | 0.12903 (13) | 1.1767 (2) | 0.3159 (4) | 0.0818 (9) | |
H8 | 0.1524 | 1.2378 | 0.3017 | 0.098* | |
C9 | −0.00455 (11) | 1.1045 (2) | 0.1681 (3) | 0.0625 (7) | |
C10 | −0.04448 (12) | 1.0358 (3) | 0.2124 (4) | 0.0794 (8) | |
H10 | −0.0396 | 0.9858 | 0.3000 | 0.095* | |
C11 | −0.09104 (14) | 1.0392 (3) | 0.1309 (4) | 0.0915 (10) | |
H11 | −0.1169 | 0.9917 | 0.1637 | 0.110* | |
C12 | −0.09944 (13) | 1.1121 (3) | 0.0017 (4) | 0.0861 (9) | |
H12 | −0.1308 | 1.1138 | −0.0542 | 0.103* | |
C13 | −0.06131 (14) | 1.1823 (3) | −0.0441 (4) | 0.0860 (9) | |
H13 | −0.0669 | 1.2334 | −0.1305 | 0.103* | |
C14 | −0.01455 (12) | 1.1781 (2) | 0.0369 (3) | 0.0742 (8) | |
H14 | 0.0111 | 1.2259 | 0.0029 | 0.089* | |
C15 | 0.28470 (11) | 1.0080 (3) | 0.5171 (3) | 0.0755 (8) | |
H15A | 0.2883 | 1.0888 | 0.5633 | 0.091* | |
H15B | 0.2829 | 0.9501 | 0.6020 | 0.091* | |
C16 | 0.33098 (11) | 0.9807 (3) | 0.4369 (3) | 0.0693 (8) | |
C17 | 0.34419 (12) | 0.8634 (3) | 0.3946 (4) | 0.0835 (9) | |
H17 | 0.3233 | 0.7983 | 0.4141 | 0.100* | |
C18 | 0.38742 (12) | 0.8414 (3) | 0.3245 (4) | 0.0842 (9) | |
H18 | 0.3949 | 0.7617 | 0.2969 | 0.101* | |
C19 | 0.42038 (11) | 0.9346 (2) | 0.2936 (3) | 0.0691 (7) | |
C20 | 0.40646 (12) | 1.0518 (3) | 0.3335 (3) | 0.0765 (8) | |
H20 | 0.4272 | 1.1171 | 0.3131 | 0.092* | |
C21 | 0.36305 (12) | 1.0742 (3) | 0.4021 (3) | 0.0771 (8) | |
H21 | 0.3549 | 1.1543 | 0.4259 | 0.092* | |
C22 | 0.46846 (12) | 0.9127 (2) | 0.2257 (3) | 0.0713 (8) | |
C23 | 0.51116 (13) | 0.9770 (3) | 0.2778 (4) | 0.0803 (8) | |
H23 | 0.5095 | 1.0343 | 0.3572 | 0.096* | |
C24 | 0.55622 (13) | 0.9583 (3) | 0.2149 (4) | 0.0901 (9) | |
H24 | 0.5846 | 1.0013 | 0.2535 | 0.108* | |
C25 | 0.55908 (15) | 0.8762 (3) | 0.0956 (4) | 0.0972 (10) | |
H25 | 0.5892 | 0.8645 | 0.0511 | 0.117* | |
C26 | 0.51730 (16) | 0.8117 (3) | 0.0426 (4) | 0.0997 (11) | |
H26 | 0.5191 | 0.7556 | −0.0382 | 0.120* | |
C27 | 0.47252 (13) | 0.8289 (3) | 0.1076 (4) | 0.0876 (9) | |
H27 | 0.4446 | 0.7832 | 0.0712 | 0.105* | |
O28 | 0.25125 (8) | 1.18264 (17) | 0.2660 (2) | 0.0832 (6) | |
C28 | 0.24207 (10) | 1.0753 (2) | 0.2650 (3) | 0.0605 (7) | |
C29 | 0.25045 (14) | 1.0616 (3) | −0.0089 (3) | 0.0948 (10) | |
H29A | 0.2290 | 1.0272 | −0.0949 | 0.114* | |
H29B | 0.2442 | 1.1488 | −0.0057 | 0.114* | |
O29 | 0.23854 (7) | 1.00596 (15) | 0.1374 (2) | 0.0718 (5) | |
C30 | 0.30214 (15) | 1.0404 (5) | −0.0344 (4) | 0.1436 (18) | |
H30A | 0.3094 | 1.0781 | −0.1308 | 0.215* | |
H30B | 0.3081 | 0.9541 | −0.0399 | 0.215* | |
H30C | 0.3233 | 1.0748 | 0.0505 | 0.215* | |
N31 | 0.21988 (7) | 0.87799 (17) | 0.3746 (2) | 0.0540 (5) | |
H31 | 0.2168 | 0.8587 | 0.2771 | 0.065* | |
C32 | 0.21131 (10) | 0.7910 (2) | 0.4761 (3) | 0.0646 (7) | |
H32 | 0.2028 | 0.7144 | 0.4348 | 0.077* | |
O33 | 0.21336 (8) | 0.80074 (17) | 0.6185 (2) | 0.0859 (6) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0798 (18) | 0.0478 (14) | 0.0464 (14) | −0.0105 (13) | 0.0032 (13) | −0.0042 (12) |
C2 | 0.102 (2) | 0.0563 (16) | 0.0612 (17) | −0.0057 (15) | 0.0191 (16) | −0.0125 (13) |
C3 | 0.085 (2) | 0.0522 (16) | 0.0588 (16) | 0.0010 (15) | 0.0278 (15) | −0.0095 (13) |
C4 | 0.091 (2) | 0.0633 (18) | 0.0649 (18) | 0.0027 (16) | 0.0287 (16) | 0.0131 (14) |
C5 | 0.086 (2) | 0.0589 (17) | 0.0750 (19) | −0.0045 (15) | 0.0285 (16) | 0.0111 (15) |
C6 | 0.0819 (19) | 0.0432 (14) | 0.0634 (16) | 0.0058 (13) | 0.0360 (15) | −0.0026 (12) |
C7 | 0.090 (2) | 0.0489 (16) | 0.103 (2) | 0.0070 (16) | 0.0234 (19) | 0.0156 (16) |
C8 | 0.093 (2) | 0.0459 (16) | 0.110 (3) | −0.0053 (16) | 0.0252 (19) | 0.0061 (16) |
C9 | 0.0820 (19) | 0.0479 (15) | 0.0625 (17) | 0.0107 (14) | 0.0334 (15) | −0.0036 (13) |
C10 | 0.085 (2) | 0.075 (2) | 0.082 (2) | 0.0054 (17) | 0.0308 (18) | 0.0121 (16) |
C11 | 0.088 (2) | 0.094 (2) | 0.097 (2) | 0.0025 (19) | 0.031 (2) | 0.005 (2) |
C12 | 0.090 (2) | 0.082 (2) | 0.089 (2) | 0.0199 (18) | 0.0207 (19) | −0.0092 (19) |
C13 | 0.113 (3) | 0.066 (2) | 0.081 (2) | 0.022 (2) | 0.017 (2) | 0.0031 (17) |
C14 | 0.099 (2) | 0.0521 (17) | 0.075 (2) | 0.0074 (16) | 0.0325 (17) | 0.0045 (15) |
C15 | 0.099 (2) | 0.0712 (19) | 0.0541 (16) | −0.0174 (16) | −0.0059 (15) | 0.0020 (14) |
C16 | 0.079 (2) | 0.0624 (18) | 0.0619 (17) | −0.0085 (16) | −0.0178 (15) | 0.0042 (14) |
C17 | 0.078 (2) | 0.0572 (18) | 0.111 (3) | −0.0072 (16) | −0.0130 (19) | 0.0127 (17) |
C18 | 0.084 (2) | 0.0498 (17) | 0.113 (3) | −0.0008 (16) | −0.0223 (19) | 0.0041 (16) |
C19 | 0.0741 (19) | 0.0557 (17) | 0.0729 (18) | −0.0005 (15) | −0.0201 (15) | 0.0046 (14) |
C20 | 0.081 (2) | 0.0550 (17) | 0.091 (2) | −0.0106 (15) | −0.0050 (17) | −0.0009 (15) |
C21 | 0.086 (2) | 0.0546 (17) | 0.088 (2) | −0.0107 (16) | −0.0058 (18) | −0.0051 (15) |
C22 | 0.081 (2) | 0.0558 (17) | 0.0718 (19) | 0.0047 (15) | −0.0217 (16) | 0.0085 (15) |
C23 | 0.087 (2) | 0.073 (2) | 0.079 (2) | −0.0021 (17) | −0.0065 (18) | 0.0031 (16) |
C24 | 0.089 (2) | 0.078 (2) | 0.102 (3) | −0.0029 (19) | −0.002 (2) | 0.0146 (19) |
C25 | 0.107 (3) | 0.079 (2) | 0.105 (3) | 0.023 (2) | 0.008 (2) | 0.018 (2) |
C26 | 0.125 (3) | 0.079 (2) | 0.091 (3) | 0.026 (2) | −0.011 (2) | −0.0064 (19) |
C27 | 0.094 (2) | 0.069 (2) | 0.095 (2) | 0.0113 (18) | −0.0211 (19) | −0.0072 (18) |
O28 | 0.1105 (16) | 0.0494 (11) | 0.0900 (15) | −0.0113 (11) | 0.0117 (12) | 0.0073 (10) |
C28 | 0.0720 (19) | 0.0524 (16) | 0.0568 (16) | 0.0004 (14) | 0.0042 (13) | 0.0040 (14) |
C29 | 0.145 (3) | 0.078 (2) | 0.0634 (19) | −0.004 (2) | 0.016 (2) | 0.0231 (16) |
O29 | 0.1116 (15) | 0.0563 (11) | 0.0489 (10) | −0.0010 (10) | 0.0139 (10) | 0.0105 (9) |
C30 | 0.115 (3) | 0.232 (5) | 0.087 (3) | −0.017 (3) | 0.025 (2) | 0.046 (3) |
N31 | 0.0788 (15) | 0.0477 (12) | 0.0359 (10) | −0.0066 (10) | 0.0063 (10) | 0.0011 (9) |
C32 | 0.086 (2) | 0.0525 (16) | 0.0562 (17) | −0.0061 (14) | 0.0118 (15) | 0.0054 (14) |
O33 | 0.1376 (19) | 0.0734 (13) | 0.0480 (12) | −0.0106 (12) | 0.0149 (11) | 0.0115 (10) |
Geometric parameters (Å, º) top
C1—N31 | 1.459 (3) | C17—C18 | 1.371 (4) |
C1—C28 | 1.527 (3) | C17—H17 | 0.9300 |
C1—C2 | 1.549 (3) | C18—C19 | 1.390 (4) |
C1—C15 | 1.552 (4) | C18—H18 | 0.9300 |
C2—C3 | 1.501 (4) | C19—C20 | 1.387 (4) |
C2—H2A | 0.9700 | C19—C22 | 1.478 (4) |
C2—H2B | 0.9700 | C20—C21 | 1.370 (4) |
C3—C4 | 1.379 (4) | C20—H20 | 0.9300 |
C3—C8 | 1.388 (4) | C21—H21 | 0.9300 |
C4—C5 | 1.370 (4) | C22—C27 | 1.378 (4) |
C4—H4 | 0.9300 | C22—C23 | 1.382 (4) |
C5—C6 | 1.391 (3) | C23—C24 | 1.380 (4) |
C5—H5 | 0.9300 | C23—H23 | 0.9300 |
C6—C7 | 1.381 (4) | C24—C25 | 1.369 (4) |
C6—C9 | 1.471 (4) | C24—H24 | 0.9300 |
C7—C8 | 1.373 (4) | C25—C26 | 1.366 (5) |
C7—H7 | 0.9300 | C25—H25 | 0.9300 |
C8—H8 | 0.9300 | C26—C27 | 1.379 (5) |
C9—C10 | 1.387 (4) | C26—H26 | 0.9300 |
C9—C14 | 1.391 (4) | C27—H27 | 0.9300 |
C10—C11 | 1.374 (4) | O28—C28 | 1.199 (3) |
C10—H10 | 0.9300 | C28—O29 | 1.329 (3) |
C11—C12 | 1.369 (4) | C29—C30 | 1.438 (5) |
C11—H11 | 0.9300 | C29—O29 | 1.456 (3) |
C12—C13 | 1.363 (4) | C29—H29A | 0.9700 |
C12—H12 | 0.9300 | C29—H29B | 0.9700 |
C13—C14 | 1.378 (4) | C30—H30A | 0.9600 |
C13—H13 | 0.9300 | C30—H30B | 0.9600 |
C14—H14 | 0.9300 | C30—H30C | 0.9600 |
C15—C16 | 1.499 (4) | N31—C32 | 1.324 (3) |
C15—H15A | 0.9700 | N31—H31 | 0.8600 |
C15—H15B | 0.9700 | C32—O33 | 1.223 (3) |
C16—C21 | 1.385 (4) | C32—H32 | 0.9300 |
C16—C17 | 1.389 (4) | | |
| | | |
N31—C1—C28 | 110.24 (19) | C17—C16—C15 | 123.0 (3) |
N31—C1—C2 | 111.7 (2) | C18—C17—C16 | 121.4 (3) |
C28—C1—C2 | 108.7 (2) | C18—C17—H17 | 119.3 |
N31—C1—C15 | 110.9 (2) | C16—C17—H17 | 119.3 |
C28—C1—C15 | 106.5 (2) | C17—C18—C19 | 122.0 (3) |
C2—C1—C15 | 108.6 (2) | C17—C18—H18 | 119.0 |
C3—C2—C1 | 115.9 (2) | C19—C18—H18 | 119.0 |
C3—C2—H2A | 108.3 | C20—C19—C18 | 116.3 (3) |
C1—C2—H2A | 108.3 | C20—C19—C22 | 120.6 (3) |
C3—C2—H2B | 108.3 | C18—C19—C22 | 123.0 (3) |
C1—C2—H2B | 108.3 | C21—C20—C19 | 121.8 (3) |
H2A—C2—H2B | 107.4 | C21—C20—H20 | 119.1 |
C4—C3—C8 | 116.5 (3) | C19—C20—H20 | 119.1 |
C4—C3—C2 | 121.1 (3) | C20—C21—C16 | 121.8 (3) |
C8—C3—C2 | 122.3 (3) | C20—C21—H21 | 119.1 |
C5—C4—C3 | 121.5 (3) | C16—C21—H21 | 119.1 |
C5—C4—H4 | 119.3 | C27—C22—C23 | 117.4 (3) |
C3—C4—H4 | 119.3 | C27—C22—C19 | 121.7 (3) |
C4—C5—C6 | 122.7 (3) | C23—C22—C19 | 120.9 (3) |
C4—C5—H5 | 118.7 | C24—C23—C22 | 121.6 (3) |
C6—C5—H5 | 118.7 | C24—C23—H23 | 119.2 |
C7—C6—C5 | 115.4 (3) | C22—C23—H23 | 119.2 |
C7—C6—C9 | 122.5 (3) | C25—C24—C23 | 119.9 (3) |
C5—C6—C9 | 122.1 (3) | C25—C24—H24 | 120.0 |
C8—C7—C6 | 122.4 (3) | C23—C24—H24 | 120.0 |
C8—C7—H7 | 118.8 | C26—C25—C24 | 119.3 (4) |
C6—C7—H7 | 118.8 | C26—C25—H25 | 120.3 |
C7—C8—C3 | 121.6 (3) | C24—C25—H25 | 120.3 |
C7—C8—H8 | 119.2 | C25—C26—C27 | 120.6 (4) |
C3—C8—H8 | 119.2 | C25—C26—H26 | 119.7 |
C10—C9—C14 | 116.0 (3) | C27—C26—H26 | 119.7 |
C10—C9—C6 | 121.7 (3) | C22—C27—C26 | 121.1 (3) |
C14—C9—C6 | 122.3 (3) | C22—C27—H27 | 119.5 |
C11—C10—C9 | 122.1 (3) | C26—C27—H27 | 119.5 |
C11—C10—H10 | 118.9 | O28—C28—O29 | 124.4 (2) |
C9—C10—H10 | 118.9 | O28—C28—C1 | 122.7 (2) |
C12—C11—C10 | 120.3 (3) | O29—C28—C1 | 112.9 (2) |
C12—C11—H11 | 119.9 | C30—C29—O29 | 110.5 (3) |
C10—C11—H11 | 119.9 | C30—C29—H29A | 109.5 |
C13—C12—C11 | 119.3 (3) | O29—C29—H29A | 109.5 |
C13—C12—H12 | 120.4 | C30—C29—H29B | 109.5 |
C11—C12—H12 | 120.4 | O29—C29—H29B | 109.5 |
C12—C13—C14 | 120.4 (3) | H29A—C29—H29B | 108.1 |
C12—C13—H13 | 119.8 | C28—O29—C29 | 117.8 (2) |
C14—C13—H13 | 119.8 | C29—C30—H30A | 109.5 |
C13—C14—C9 | 121.9 (3) | C29—C30—H30B | 109.5 |
C13—C14—H14 | 119.0 | H30A—C30—H30B | 109.5 |
C9—C14—H14 | 119.0 | C29—C30—H30C | 109.5 |
C16—C15—C1 | 116.4 (2) | H30A—C30—H30C | 109.5 |
C16—C15—H15A | 108.2 | H30B—C30—H30C | 109.5 |
C1—C15—H15A | 108.2 | C32—N31—C1 | 125.8 (2) |
C16—C15—H15B | 108.2 | C32—N31—H31 | 117.1 |
C1—C15—H15B | 108.2 | C1—N31—H31 | 117.1 |
H15A—C15—H15B | 107.3 | O33—C32—N31 | 126.8 (2) |
C21—C16—C17 | 116.7 (3) | O33—C32—H32 | 116.6 |
C21—C16—C15 | 120.3 (3) | N31—C32—H32 | 116.6 |
| | | |
N31—C1—C2—C3 | −60.1 (3) | C16—C17—C18—C19 | 0.6 (5) |
C28—C1—C2—C3 | 61.8 (3) | C17—C18—C19—C20 | −1.7 (4) |
C15—C1—C2—C3 | 177.3 (2) | C17—C18—C19—C22 | 176.7 (3) |
C1—C2—C3—C4 | 92.2 (3) | C18—C19—C20—C21 | 1.1 (4) |
C1—C2—C3—C8 | −89.0 (3) | C22—C19—C20—C21 | −177.4 (3) |
C8—C3—C4—C5 | 0.5 (4) | C19—C20—C21—C16 | 0.7 (5) |
C2—C3—C4—C5 | 179.4 (2) | C17—C16—C21—C20 | −1.9 (4) |
C3—C4—C5—C6 | −0.1 (4) | C15—C16—C21—C20 | 177.9 (3) |
C4—C5—C6—C7 | −0.6 (4) | C20—C19—C22—C27 | −141.1 (3) |
C4—C5—C6—C9 | 178.8 (2) | C18—C19—C22—C27 | 40.5 (4) |
C5—C6—C7—C8 | 0.9 (4) | C20—C19—C22—C23 | 38.2 (4) |
C9—C6—C7—C8 | −178.5 (3) | C18—C19—C22—C23 | −140.2 (3) |
C6—C7—C8—C3 | −0.5 (5) | C27—C22—C23—C24 | −0.2 (4) |
C4—C3—C8—C7 | −0.2 (4) | C19—C22—C23—C24 | −179.5 (3) |
C2—C3—C8—C7 | −179.1 (3) | C22—C23—C24—C25 | 1.4 (5) |
C7—C6—C9—C10 | −162.9 (3) | C23—C24—C25—C26 | −1.4 (5) |
C5—C6—C9—C10 | 17.8 (4) | C24—C25—C26—C27 | 0.2 (5) |
C7—C6—C9—C14 | 18.5 (4) | C23—C22—C27—C26 | −1.0 (4) |
C5—C6—C9—C14 | −160.9 (2) | C19—C22—C27—C26 | 178.3 (3) |
C14—C9—C10—C11 | 0.6 (4) | C25—C26—C27—C22 | 1.0 (5) |
C6—C9—C10—C11 | −178.1 (3) | N31—C1—C28—O28 | 175.7 (2) |
C9—C10—C11—C12 | −0.2 (5) | C2—C1—C28—O28 | 52.9 (3) |
C10—C11—C12—C13 | −0.7 (5) | C15—C1—C28—O28 | −63.9 (3) |
C11—C12—C13—C14 | 1.3 (4) | N31—C1—C28—O29 | −5.4 (3) |
C12—C13—C14—C9 | −0.9 (4) | C2—C1—C28—O29 | −128.2 (2) |
C10—C9—C14—C13 | −0.1 (4) | C15—C1—C28—O29 | 115.0 (2) |
C6—C9—C14—C13 | 178.6 (2) | O28—C28—O29—C29 | 5.0 (4) |
N31—C1—C15—C16 | 73.2 (3) | C1—C28—O29—C29 | −173.9 (2) |
C28—C1—C15—C16 | −46.7 (3) | C30—C29—O29—C28 | 93.8 (3) |
C2—C1—C15—C16 | −163.6 (2) | C28—C1—N31—C32 | 178.4 (2) |
C1—C15—C16—C21 | 105.0 (3) | C2—C1—N31—C32 | −60.6 (3) |
C1—C15—C16—C17 | −75.3 (3) | C15—C1—N31—C32 | 60.7 (3) |
C21—C16—C17—C18 | 1.2 (4) | C1—N31—C32—O33 | 0.7 (4) |
C15—C16—C17—C18 | −178.5 (3) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N31—H31···O29 | 0.86 | 2.12 | 2.556 (2) | 111 |
N31—H31···O33i | 0.86 | 2.21 | 2.936 (3) | 142 |
C15—H15B···O33 | 0.97 | 2.49 | 3.137 (3) | 124 |
C2—H2A···O33 | 0.97 | 2.55 | 3.139 (3) | 119 |
Symmetry code: (i) x, −y+3/2, z−1/2. |
Experimental details
| (I) | (II) |
Crystal data |
Chemical formula | C19H21NO3 | C31H29NO3 |
Mr | 311.37 | 463.55 |
Crystal system, space group | Monoclinic, P21/c | Monoclinic, P21/c |
Temperature (K) | 293 | 293 |
a, b, c (Å) | 9.980 (2), 11.853 (3), 14.575 (4) | 26.761 (5), 10.9424 (19), 8.5818 (15) |
β (°) | 94.147 (4) | 95.068 (3) |
V (Å3) | 1719.6 (7) | 2503.2 (8) |
Z | 4 | 4 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.08 | 0.08 |
Crystal size (mm) | 0.52 × 0.43 × 0.42 | 0.54 × 0.45 × 0.45 |
|
Data collection |
Diffractometer | Bruker SMART CCD area-detector diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | – | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13797, 3802, 2295 | 21471, 5898, 2853 |
Rint | 0.023 | 0.052 |
(sin θ/λ)max (Å−1) | 0.658 | 0.661 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.062, 0.161, 1.05 | 0.080, 0.161, 1.05 |
No. of reflections | 3802 | 5898 |
No. of parameters | 245 | 316 |
No. of restraints | 75 | 317 |
H-atom treatment | H-atom parameters constrained | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.22, −0.11 | 0.19, −0.12 |
Hydrogen-bond geometry (Å, º) for (I) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O16A | 0.86 | 2.22 | 2.657 (15) | 111 |
N1—H1···O16B | 0.86 | 2.11 | 2.55 (2) | 111 |
C5—H5···O19i | 0.93 | 2.46 | 3.314 (3) | 152 |
C2—H2B···O19 | 0.97 | 2.57 | 3.168 (3) | 119 |
C9—H9A···O19 | 0.97 | 2.64 | 3.170 (3) | 114 |
Symmetry code: (i) x, −y+1/2, z−1/2. |
Hydrogen-bond geometry (Å, º) for (II) top
D—H···A | D—H | H···A | D···A | D—H···A |
N31—H31···O29 | 0.86 | 2.12 | 2.556 (2) | 111 |
N31—H31···O33i | 0.86 | 2.21 | 2.936 (3) | 142 |
C15—H15B···O33 | 0.97 | 2.49 | 3.137 (3) | 124 |
C2—H2A···O33 | 0.97 | 2.55 | 3.139 (3) | 119 |
Symmetry code: (i) x, −y+3/2, z−1/2. |
α-Aminoisobutyric acid (Aib), which is achiral, has well established structural impacts [features?] (Karle et al., 1994; Ramesh & Balaram, 1999; Formaggio et al., 2000). Similarly, benzyl substitution at the Cα position provides rigidity to the peptide backbone and this conformational restriction is useful in peptide motif design (Studer & Seebach, 1995; Damodharan et al., 2002; Karle & Balaram, 1990; Polese et al., 1996; Kotha & Brahmachary, 2000). The effect of benzyl and phenyl substitution at the Cα position of Aib has been studied via crystal structure analyses. Both of the title compounds, C19H21NO3, (I), and C31H29NO3, (II), crystallize in the same P21/c space group from 1:1 n-propanol–methanol and 2-propanol solution, respectively.
The crystal structures of the title compounds are shown in Fig. 1. Terminal atoms C18 and C17 of the ethyl ester side chains of (I) exhibit disorder. The bond angles at atoms C2 and C9 of (I), and at C2 and C15 of (II), are significantly larger than normal tetrahedral values because of the presence of the bulky substitutions [115.4 (2)° at C2 and 115.8 (3)° at C9 in (I), and 115.9 (2)° at C2 and 116.4 (2)° at C15 in (II)]. The angles between benzene rings A and B are 61.4 (2) and 61.8 (1)° in (I) and (II), respectively. The angle between rings A and C in (II) is 18.1 (1)°, and that between rings B and D in (II) is 39.8 (2)°. Additional phenyl substitution causes the molecules to be arranged along the longest axis (viz. the a axis) in (II), and a herringbone packing arrangement is seen in both structures.
The N-formyl and ethyl ester chains form a pseudo-peptide. The backbone of this pseudo-peptide adopts a trans–trans conformation [C16—C1—N1—C19 (ϕ) = −178.8 (3)°, O17A—C16—C1—N1 (ψ) = 170.5 (5)° and O17B—C16—C1—N1 (ψ) = −169.8 (7)°; as a result of disorder, ψ adopt two values] in (I), while the pseudo-peptide adopts a trans–cis conformation in (II) [C28—C1—N31—C32 (ϕ) = 178.4 (2)° and N31—C1—C28—O29 (ψ) = −5.4 (3)°; Fig. 2]. This conformational switching may be due to the additional phenyl ring substitutions on either side of the Cα atom.
The N-formyl side chain is planar and is in a folded conformation in both compounds [C1—N1—C19—-O19 = −4.4 (5)° and C1—N31—C32—O33 = 0.7 (4)° for (I) and (II), respectively]. The ethyl ester side chains adopt different conformations in the two compounds, viz. -ap (antiperiplanar) and +sc (syn-clinal) in (I), and +ac (anticlinal) in (II) [C16—O17A—C17A—C18A = −171.9 (10)° (-ap) and C16—O17B—C17B—C18B = 82 (2)° (+sc) in (I) (two conformations as a result of the disorder), and C28—O29—C29—C30 = 93.8 (4)° (+ac) in (II)]. The switch from -ap/+sc to +ap can be attributed to the biphenyl substitutions (Fig. 3).
N—H···O and C—H···O intramolecular hydrogen bonds are present in both structures. The N1—C1—C16 (τ) angle is 105.0 (2)°, which may be due to the intramolecular N1—H···O16 hydrogen bond, whereas the corresponding angle [N31—C1—C28 (τ)] in (II) is 110.2 (2)° (Fig. 4). The bifurcated N31—H31···O29(x,y,z)/O33(x,3/2 − y,z − 1/2) hydrogen bond may be the reason for the widening of this bond angle.
The packing of both structures is stabilized by C—H···O and N—H···O interactions. Atom O19 of the N-formyl group in (I) forms an intermolecular C5—H5···O19 hydrogen bond, which is replaced by an N31—H31···O33 hydrogen bond in (II) (Tables 1 and 2, and Figs. 3 and 4).