The structures of two compounds, 3-[1-(2-hydroxyethylamino)ethylidene]-2-methoxy-3,4-dihydro-1,2λ
5-benzoxaphosphinane-2,4-dione, C
13H
16NO
5P, and 3-[1-(2-hydroxy-ethylamino)ethylidene]-2-methoxy-6-methyl-3,4-dihydro-1,2λ
5-benzoxaphosphinane-2,4-dione, C
14H
18NO
5P, have been studied and compared. The oxophosphinane rings have a half-chair conformation and extra six- and five-membered rings are formed by intramolecular N—H
O hydrogen bonds. An intermolecular O—H
O hydrogen bond is also observed.
Supporting information
CCDC references: 170181; 170182
To the mixture of the compounds
2-methyl-4-oxo-4H-chromen-3-yl-phosphonate (for I) or
2,6-dimethyl-4-oxo-4H-chromen-3-yl-phosphonate (for II) in methanol was
added ethanylamine in methanol. The mixture was left overnight at room
temperature. The solvent was removed in vacuo and crude products of
(I), and (II) were purified by crystallization. The colourless crystals were
obtained by slow evaporation from methanol at room temperature (Budzisz &
Pastuszko, 1999; Budzisz et al., 2001). The reaction was carried out at
room temperature in anhydrous methanol.
For both compounds, data collection: MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1989a); cell refinement: MSC/AFC Diffractometer Control Software; data reduction: TEXSAN (1989b); program(s) used to solve structure: SHELXS86 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997). Molecular graphics: ORTEX (Mc Ardle, 1995) for (I); ORTEX (McArdle, 1995) for (II). For both compounds, software used to prepare material for publication: PARST97 (Nardelli, 1996).
(I) 2-methoxy-3-[1(2-hydroxyethylamine)ethylidene]-2,3-dihydro-2,4-dioxo-
2
λ5-benzo[
e][1,2]oxaphosphinane
top
Crystal data top
C13H16NO5P | Dx = 1.403 Mg m−3 |
Mr = 297.24 | Cu Kα radiation, λ = 1.54178 Å |
Orthorhombic, P212121 | Cell parameters from 25 reflections |
a = 9.325 (1) Å | θ = 26.9–30.5° |
b = 9.662 (1) Å | µ = 1.92 mm−1 |
c = 15.619 (2) Å | T = 293 K |
V = 1407.4 (1) Å3 | Prism, colourless |
Z = 4 | 0.2 × 0.1 × 0.1 mm |
F(000) = 624 | |
Data collection top
AFC5S Rigaku diffractometer | 1664 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.064 |
Graphite monochromator | θmax = 66.0°, θmin = 5.5° |
ω scan | h = −11→11 |
Absorption correction: analytical (De Meulenar & Tompa, 1965) | k = −11→9 |
Tmin = 0.712, Tmax = 0.841 | l = −18→18 |
8498 measured reflections | 3 standard reflections every 150 min |
2402 independent reflections | intensity decay: <2% |
Refinement top
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.064 | w = [1.00000exp(3.00(sinθ/λ)2)]/
[σ2(Fo2) + (0.1052P)2]
where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.157 | (Δ/σ)max = 0.051 |
S = 1.23 | Δρmax = 0.42 e Å−3 |
2402 reflections | Δρmin = −0.62 e Å−3 |
224 parameters | Absolute structure: (Flack, 1983) |
0 restraints | Absolute structure parameter: 0.00 (5) |
Primary atom site location: structure-invariant direct methods | |
Crystal data top
C13H16NO5P | V = 1407.4 (1) Å3 |
Mr = 297.24 | Z = 4 |
Orthorhombic, P212121 | Cu Kα radiation |
a = 9.325 (1) Å | µ = 1.92 mm−1 |
b = 9.662 (1) Å | T = 293 K |
c = 15.619 (2) Å | 0.2 × 0.1 × 0.1 mm |
Data collection top
AFC5S Rigaku diffractometer | 1664 reflections with I > 2σ(I) |
Absorption correction: analytical (De Meulenar & Tompa, 1965) | Rint = 0.064 |
Tmin = 0.712, Tmax = 0.841 | 3 standard reflections every 150 min |
8498 measured reflections | intensity decay: <2% |
2402 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.064 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.157 | Δρmax = 0.42 e Å−3 |
S = 1.23 | Δρmin = −0.62 e Å−3 |
2402 reflections | Absolute structure: (Flack, 1983) |
224 parameters | Absolute structure parameter: 0.00 (5) |
0 restraints | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. All H-atoms from methyl groups constrained to their parent atoms
as a rigid body SHELXL97 (Sheldrick, 1997). U(H231)=1.1 Ueqof
its parent atom. U(H232)=1.1 Ueqof its parent atom. U(H233)=1.1
Ueqof its parent atom. U(H342)=1.1 Ueqof its parent atom.
U(H5)=1.1 Ueqof its parent atom. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 1.0085 (4) | 0.6457 (3) | 0.47913 (18) | 0.0567 (8) | |
P2 | 0.99166 (15) | 0.52449 (13) | 0.41005 (7) | 0.0513 (3) | |
O21 | 0.9628 (5) | 0.3971 (4) | 0.4561 (2) | 0.0714 (11) | |
O22 | 1.1366 (4) | 0.5232 (5) | 0.3601 (2) | 0.0696 (11) | |
C23 | 1.2650 (7) | 0.4675 (9) | 0.4012 (5) | 0.101 (2) | |
H231 | 1.3069 | 0.5371 | 0.4372 | 0.111* | |
H232 | 1.3329 | 0.4404 | 0.3581 | 0.111* | |
H233 | 1.2396 | 0.3885 | 0.4352 | 0.111* | |
C3 | 0.8643 (5) | 0.5872 (5) | 0.3370 (3) | 0.0480 (10) | |
C4 | 0.8479 (5) | 0.7341 (5) | 0.3302 (3) | 0.0493 (11) | |
O4 | 0.7573 (4) | 0.7897 (4) | 0.2813 (2) | 0.0639 (10) | |
C5 | 0.9452 (5) | 0.9682 (6) | 0.3623 (3) | 0.0533 (12) | |
H5 | 0.890 (6) | 0.993 (6) | 0.324 (3) | 0.059* | |
C6 | 1.0258 (6) | 1.0587 (6) | 0.4111 (4) | 0.0665 (14) | |
H6 | 1.025 (6) | 1.154 (6) | 0.402 (4) | 0.066 (16)* | |
C7 | 1.0992 (6) | 1.0096 (6) | 0.4823 (4) | 0.0682 (16) | |
H7 | 1.154 (6) | 1.067 (5) | 0.509 (3) | 0.055 (14)* | |
C8 | 1.0935 (6) | 0.8733 (6) | 0.5026 (4) | 0.0619 (13) | |
H8 | 1.155 (7) | 0.814 (7) | 0.555 (4) | 0.09 (2)* | |
C9 | 1.0141 (5) | 0.7822 (5) | 0.4541 (3) | 0.0522 (11) | |
C10 | 0.9371 (5) | 0.8295 (5) | 0.3819 (3) | 0.0454 (10) | |
C31 | 0.7798 (5) | 0.4932 (5) | 0.2876 (3) | 0.0508 (11) | |
C311 | 0.8019 (6) | 0.3403 (6) | 0.2894 (4) | 0.0624 (13) | |
H311 | 0.8980 | 0.3204 | 0.3077 | 0.057 (15)* | |
H312 | 0.7869 | 0.3032 | 0.2331 | 0.12 (3)* | |
H313 | 0.7351 | 0.2991 | 0.3285 | 0.11 (2)* | |
N32 | 0.6769 (4) | 0.5415 (5) | 0.2383 (3) | 0.0568 (11) | |
H32 | 0.679 (6) | 0.642 (7) | 0.235 (4) | 0.068 (17)* | |
C33 | 0.5784 (6) | 0.4641 (7) | 0.1846 (4) | 0.0642 (14) | |
H331 | 0.541 (7) | 0.374 (7) | 0.214 (4) | 0.10 (2)* | |
H332 | 0.640 (5) | 0.445 (5) | 0.139 (3) | 0.043 (12)* | |
C34 | 0.4537 (6) | 0.5512 (6) | 0.1608 (4) | 0.0617 (14) | |
H341 | 0.384 (5) | 0.495 (5) | 0.118 (3) | 0.047 (12)* | |
H342 | 0.394 (6) | 0.571 (5) | 0.207 (3) | 0.052* | |
O35 | 0.4923 (5) | 0.6801 (4) | 0.1261 (3) | 0.0689 (10) | |
H35 | 0.541 (7) | 0.665 (7) | 0.095 (4) | 0.07 (2)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.067 (2) | 0.0493 (19) | 0.0534 (14) | 0.0048 (19) | −0.0097 (18) | −0.0007 (13) |
P2 | 0.0526 (7) | 0.0488 (6) | 0.0523 (5) | 0.0043 (6) | −0.0049 (6) | −0.0009 (5) |
O21 | 0.087 (3) | 0.054 (2) | 0.073 (2) | 0.0046 (19) | −0.021 (2) | −0.0007 (17) |
O22 | 0.057 (2) | 0.093 (3) | 0.0588 (18) | 0.014 (2) | −0.0113 (16) | −0.0076 (19) |
C23 | 0.059 (4) | 0.153 (7) | 0.090 (4) | 0.031 (4) | −0.018 (4) | −0.013 (5) |
C3 | 0.041 (2) | 0.053 (3) | 0.050 (2) | −0.0034 (19) | 0.005 (2) | −0.004 (2) |
C4 | 0.038 (2) | 0.064 (3) | 0.046 (2) | 0.000 (2) | 0.0026 (19) | −0.001 (2) |
O4 | 0.064 (2) | 0.057 (2) | 0.070 (2) | 0.0018 (18) | −0.0280 (19) | 0.0023 (18) |
C5 | 0.038 (2) | 0.060 (3) | 0.062 (2) | 0.002 (2) | −0.007 (2) | −0.002 (2) |
C6 | 0.058 (3) | 0.054 (4) | 0.087 (3) | −0.005 (2) | −0.004 (3) | −0.004 (3) |
C7 | 0.059 (3) | 0.060 (4) | 0.086 (3) | −0.003 (3) | −0.022 (3) | −0.020 (3) |
C8 | 0.055 (3) | 0.062 (4) | 0.069 (3) | −0.003 (2) | −0.016 (3) | −0.010 (3) |
C9 | 0.040 (2) | 0.057 (3) | 0.059 (2) | 0.007 (2) | 0.000 (2) | −0.010 (2) |
C10 | 0.035 (2) | 0.047 (3) | 0.054 (2) | 0.0024 (18) | −0.0015 (18) | −0.0028 (19) |
C31 | 0.039 (2) | 0.065 (3) | 0.049 (2) | −0.003 (2) | 0.0044 (18) | 0.002 (2) |
C311 | 0.063 (3) | 0.057 (4) | 0.067 (3) | −0.002 (3) | −0.003 (3) | −0.002 (3) |
N32 | 0.050 (2) | 0.061 (3) | 0.059 (2) | −0.002 (2) | −0.0097 (18) | −0.0032 (19) |
C33 | 0.049 (3) | 0.078 (4) | 0.066 (3) | −0.005 (3) | −0.010 (2) | −0.010 (3) |
C34 | 0.049 (3) | 0.075 (4) | 0.061 (3) | −0.003 (2) | −0.002 (2) | −0.006 (3) |
O35 | 0.071 (3) | 0.068 (3) | 0.067 (2) | 0.001 (2) | −0.005 (2) | −0.0045 (18) |
Geometric parameters (Å, º) top
O1—C9 | 1.377 (6) | C7—H7 | 0.87 (6) |
O1—P2 | 1.600 (3) | C8—C9 | 1.377 (7) |
P2—O21 | 1.451 (4) | C8—H8 | 1.16 (7) |
P2—O22 | 1.561 (4) | C9—C10 | 1.413 (6) |
P2—C3 | 1.754 (5) | C31—N32 | 1.316 (6) |
O22—C23 | 1.461 (6) | C31—C311 | 1.492 (8) |
C23—H231 | 0.9600 | C311—H311 | 0.9600 |
C23—H232 | 0.9600 | C311—H312 | 0.9600 |
C23—H233 | 0.9600 | C311—H313 | 0.9600 |
C3—C31 | 1.428 (6) | N32—C33 | 1.451 (6) |
C3—C4 | 1.432 (7) | N32—H32 | 0.97 (6) |
C4—O4 | 1.259 (6) | C33—C34 | 1.483 (8) |
C4—C10 | 1.482 (6) | C33—H331 | 1.05 (7) |
C5—C10 | 1.377 (7) | C33—H332 | 0.94 (5) |
C5—C6 | 1.382 (8) | C34—O35 | 1.405 (7) |
C5—H5 | 0.82 (6) | C34—H341 | 1.09 (5) |
C6—C7 | 1.389 (8) | C34—H342 | 0.93 (5) |
C6—H6 | 0.93 (6) | O35—H35 | 0.68 (6) |
C7—C8 | 1.356 (9) | | |
| | | |
C9—O1—P2 | 120.9 (3) | O1—C9—C8 | 118.5 (5) |
O21—P2—O22 | 113.7 (2) | O1—C9—C10 | 121.1 (4) |
O21—P2—O1 | 107.7 (2) | C8—C9—C10 | 120.4 (5) |
O22—P2—O1 | 104.9 (2) | C5—C10—C9 | 117.7 (4) |
O21—P2—C3 | 119.3 (2) | C5—C10—C4 | 121.0 (4) |
O22—P2—C3 | 105.3 (2) | C9—C10—C4 | 121.3 (4) |
O1—P2—C3 | 104.6 (2) | N32—C31—C3 | 119.6 (5) |
C23—O22—P2 | 119.6 (4) | N32—C31—C311 | 117.5 (5) |
O22—C23—H231 | 109.5 | C3—C31—C311 | 122.9 (4) |
O22—C23—H232 | 109.5 | C31—C311—H311 | 109.5 |
H231—C23—H232 | 109.5 | C31—C311—H312 | 109.5 |
O22—C23—H233 | 109.5 | H311—C311—H312 | 109.5 |
H231—C23—H233 | 109.5 | C31—C311—H313 | 109.5 |
H232—C23—H233 | 109.5 | H311—C311—H313 | 109.5 |
C31—C3—C4 | 122.0 (4) | H312—C311—H313 | 109.5 |
C31—C3—P2 | 120.4 (4) | C31—N32—C33 | 128.1 (5) |
C4—C3—P2 | 117.6 (3) | C31—N32—H32 | 112 (3) |
O4—C4—C3 | 122.7 (4) | C33—N32—H32 | 120 (3) |
O4—C4—C10 | 116.2 (4) | N32—C33—C34 | 110.4 (5) |
C3—C4—C10 | 121.0 (4) | N32—C33—H331 | 113 (4) |
C10—C5—C6 | 121.5 (5) | C34—C33—H331 | 109 (4) |
C10—C5—H5 | 114 (4) | N32—C33—H332 | 99 (3) |
C6—C5—H5 | 124 (4) | C34—C33—H332 | 113 (3) |
C5—C6—C7 | 119.6 (6) | H331—C33—H332 | 113 (5) |
C5—C6—H6 | 123 (3) | O35—C34—C33 | 113.5 (5) |
C7—C6—H6 | 117 (3) | O35—C34—H341 | 111 (2) |
C8—C7—C6 | 120.0 (5) | C33—C34—H341 | 110 (2) |
C8—C7—H7 | 122 (3) | O35—C34—H342 | 106 (3) |
C6—C7—H7 | 117 (3) | C33—C34—H342 | 113 (3) |
C7—C8—C9 | 120.9 (5) | H341—C34—H342 | 103 (4) |
C7—C8—H8 | 129 (3) | C34—O35—H35 | 105 (6) |
C9—C8—H8 | 110 (3) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N32—H32···O4 | 0.97 (6) | 1.76 (6) | 2.601 (6) | 143 (5) |
N32—H32···O35 | 0.97 (6) | 2.46 (6) | 2.797 (6) | 100 (4) |
O35—H35···O21i | 0.68 (6) | 2.25 (7) | 2.790 (6) | 137 (7) |
Symmetry code: (i) −x+3/2, −y+1, z−1/2. |
(II) 6-methyl-2-methoxy-3-[1(2-hydroxyethylamine)ethylidene]-2,3-dihydro-2,4-dioxo-
2
λ5-benzo[
e][1,2]oxaphosphinane
top
Crystal data top
C14H18NO5P | Dx = 1.359 Mg m−3 |
Mr = 311.26 | Cu Kα radiation, λ = 1.54178 Å |
Orthorhombic, P212121 | Cell parameters from 25 reflections |
a = 11.071 (1) Å | θ = 22.5–28.3° |
b = 16.190 (2) Å | µ = 1.80 mm−1 |
c = 8.490 (1) Å | T = 293 K |
V = 1521.7 (3) Å3 | Prism, colourless |
Z = 4 | 0.6 × 0.3 × 0.3 mm |
F(000) = 656 | |
Data collection top
AFC5S Rigaku diffractometer | 1450 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.000 |
Graphite monochromator | θmax = 72.7°, θmin = 4.8° |
ω scan | h = 0→13 |
Absorption correction: analytical (De Meulenar & Tompa, 1965) | k = 0→20 |
Tmin = 0.505, Tmax = 0.650 | l = 0→10 |
1669 measured reflections | 3 standard reflections every 150 min |
1669 independent reflections | intensity decay: <2% |
Refinement top
Refinement on F2 | H atoms treated by a mixture of independent and constrained refinement |
Least-squares matrix: full | w = 1/[σ2(Fo2) + (0.0636P)2] where P = (Fo2 + 2Fc2)/3' |
R[F2 > 2σ(F2)] = 0.034 | (Δ/σ)max = 0.021 |
wR(F2) = 0.097 | Δρmax = 0.17 e Å−3 |
S = 1.02 | Δρmin = −0.20 e Å−3 |
1669 reflections | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
230 parameters | Extinction coefficient: 0.0055 (6) |
0 restraints | Absolute structure: (Flack, 1983) |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.01 (4) |
Hydrogen site location: difference Fourier map | |
Crystal data top
C14H18NO5P | V = 1521.7 (3) Å3 |
Mr = 311.26 | Z = 4 |
Orthorhombic, P212121 | Cu Kα radiation |
a = 11.071 (1) Å | µ = 1.80 mm−1 |
b = 16.190 (2) Å | T = 293 K |
c = 8.490 (1) Å | 0.6 × 0.3 × 0.3 mm |
Data collection top
AFC5S Rigaku diffractometer | 1450 reflections with I > 2σ(I) |
Absorption correction: analytical (De Meulenar & Tompa, 1965) | Rint = 0.000 |
Tmin = 0.505, Tmax = 0.650 | 3 standard reflections every 150 min |
1669 measured reflections | intensity decay: <2% |
1669 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.034 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.097 | Δρmax = 0.17 e Å−3 |
S = 1.02 | Δρmin = −0.20 e Å−3 |
1669 reflections | Absolute structure: (Flack, 1983) |
230 parameters | Absolute structure parameter: −0.01 (4) |
0 restraints | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. All H-atoms from methyl groups constrained to their parent atoms
as a rigid body SHELXL97 (Sheldrick, 1997). U(H311)=1.1 Ueqof
its parent atom. U(H312)=1.1 Ueqof its parent atom. U(H313)=1.1
Ueqof its parent atom. U(H231)=1.1 Ueqof its parent atom.
U(H232)=1.1 Ueqof its parent atom. U(H233)=1.1 Ueqof its
parent atom. U(H611)=1.1 Ueqof its parent atom. U(H612)=1.1
Ueqof its parent atom. U(H613)=1.1 Ueqof its parent atom. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.62126 (16) | 0.46337 (11) | 1.0008 (3) | 0.0520 (5) | |
P2 | 0.51983 (7) | 0.39481 (5) | 0.97479 (10) | 0.0496 (2) | |
O21 | 0.40728 (19) | 0.43808 (15) | 0.9387 (4) | 0.0696 (8) | |
O22 | 0.5176 (2) | 0.34439 (13) | 1.1327 (3) | 0.0683 (7) | |
C23 | 0.4646 (5) | 0.3834 (3) | 1.2733 (5) | 0.1046 (18) | |
H231 | 0.4729 | 0.4423 | 1.2656 | 0.115* | |
H233 | 0.5059 | 0.3641 | 1.3656 | 0.115* | |
H232 | 0.3806 | 0.3693 | 1.2802 | 0.115* | |
C3 | 0.5806 (2) | 0.32639 (18) | 0.8363 (4) | 0.0459 (7) | |
C4 | 0.7098 (3) | 0.32009 (18) | 0.8266 (4) | 0.0460 (7) | |
O4 | 0.76227 (18) | 0.27093 (14) | 0.7355 (3) | 0.0573 (6) | |
C5 | 0.9122 (3) | 0.35940 (19) | 0.9342 (4) | 0.0464 (7) | |
H5 | 0.937 (3) | 0.3134 (19) | 0.877 (4) | 0.049 (9)* | |
C6 | 0.9894 (3) | 0.41038 (18) | 1.0159 (4) | 0.0503 (7) | |
C61 | 1.1241 (3) | 0.3948 (2) | 1.0197 (5) | 0.0661 (9) | |
H611 | 1.1401 | 0.3388 | 0.9891 | 0.073* | |
H612 | 1.1539 | 0.4040 | 1.1245 | 0.073* | |
H613 | 1.1638 | 0.4318 | 0.9481 | 0.073* | |
C7 | 0.9408 (3) | 0.4789 (2) | 1.0915 (5) | 0.0595 (9) | |
H7 | 0.993 (3) | 0.511 (2) | 1.153 (5) | 0.069 (11)* | |
C8 | 0.8188 (3) | 0.4952 (2) | 1.0885 (5) | 0.0590 (8) | |
H8 | 0.777 (4) | 0.546 (2) | 1.151 (5) | 0.086 (13)* | |
C9 | 0.7432 (3) | 0.44233 (18) | 1.0058 (4) | 0.0482 (7) | |
C10 | 0.7872 (2) | 0.37416 (16) | 0.9268 (4) | 0.0431 (6) | |
C31 | 0.5046 (3) | 0.27695 (18) | 0.7406 (4) | 0.0478 (7) | |
C311 | 0.3694 (3) | 0.2804 (2) | 0.7469 (5) | 0.0629 (9) | |
H311 | 0.3371 | 0.2259 | 0.7325 | 0.069* | |
H312 | 0.3402 | 0.3159 | 0.6648 | 0.069* | |
H313 | 0.3444 | 0.3016 | 0.8473 | 0.069* | |
N32 | 0.5524 (2) | 0.22382 (17) | 0.6404 (3) | 0.0519 (7) | |
H32 | 0.647 (4) | 0.219 (3) | 0.645 (6) | 0.112 (16)* | |
C33 | 0.4895 (3) | 0.1648 (2) | 0.5389 (4) | 0.0564 (8) | |
H331 | 0.419 (4) | 0.192 (2) | 0.482 (5) | 0.090 (13)* | |
H332 | 0.451 (3) | 0.119 (2) | 0.594 (5) | 0.071 (11)* | |
C34 | 0.5788 (3) | 0.1299 (2) | 0.4234 (5) | 0.0604 (9) | |
H341 | 0.532 (3) | 0.0879 (19) | 0.359 (4) | 0.057 (10)* | |
H342 | 0.605 (4) | 0.185 (3) | 0.351 (6) | 0.109 (15)* | |
O35 | 0.6800 (2) | 0.09472 (16) | 0.4971 (4) | 0.0692 (7) | |
H35 | 0.667 (5) | 0.040 (3) | 0.528 (6) | 0.124 (19)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0425 (10) | 0.0429 (9) | 0.0707 (15) | 0.0015 (8) | 0.0043 (11) | −0.0085 (11) |
P2 | 0.0417 (3) | 0.0473 (4) | 0.0598 (5) | 0.0003 (3) | 0.0053 (4) | −0.0028 (4) |
O21 | 0.0401 (10) | 0.0679 (13) | 0.101 (2) | 0.0111 (11) | 0.0009 (12) | −0.0173 (14) |
O22 | 0.0927 (18) | 0.0556 (12) | 0.0566 (14) | −0.0094 (14) | 0.0192 (14) | −0.0025 (11) |
C23 | 0.160 (5) | 0.088 (3) | 0.065 (3) | −0.029 (3) | 0.048 (3) | −0.017 (2) |
C3 | 0.0372 (14) | 0.0451 (14) | 0.0553 (19) | 0.0001 (12) | 0.0002 (13) | 0.0016 (14) |
C4 | 0.0414 (14) | 0.0430 (14) | 0.0536 (17) | −0.0007 (11) | 0.0000 (13) | −0.0012 (14) |
O4 | 0.0423 (11) | 0.0611 (13) | 0.0684 (14) | 0.0006 (10) | 0.0023 (11) | −0.0193 (12) |
C5 | 0.0423 (15) | 0.0479 (15) | 0.0491 (19) | −0.0016 (12) | 0.0008 (13) | 0.0020 (13) |
C6 | 0.0428 (14) | 0.0606 (16) | 0.0476 (17) | −0.0081 (13) | −0.0010 (13) | 0.0000 (15) |
C61 | 0.0422 (15) | 0.086 (2) | 0.070 (2) | −0.0077 (17) | −0.0034 (16) | −0.001 (2) |
C7 | 0.0540 (17) | 0.066 (2) | 0.059 (2) | −0.0140 (16) | −0.0024 (17) | −0.0097 (18) |
C8 | 0.0562 (18) | 0.0601 (18) | 0.061 (2) | −0.0083 (15) | 0.0024 (16) | −0.0126 (18) |
C9 | 0.0417 (13) | 0.0468 (13) | 0.0559 (18) | −0.0003 (12) | 0.0025 (14) | −0.0035 (15) |
C10 | 0.0395 (13) | 0.0423 (14) | 0.0474 (16) | −0.0006 (11) | 0.0005 (12) | −0.0016 (12) |
C31 | 0.0405 (14) | 0.0495 (14) | 0.0534 (16) | −0.0017 (12) | −0.0028 (13) | 0.0037 (14) |
C311 | 0.0426 (16) | 0.068 (2) | 0.078 (3) | 0.0022 (15) | −0.0065 (17) | −0.0070 (19) |
N32 | 0.0439 (13) | 0.0566 (14) | 0.0550 (16) | −0.0046 (11) | −0.0041 (12) | −0.0111 (13) |
C33 | 0.0525 (17) | 0.0578 (16) | 0.059 (2) | −0.0111 (16) | −0.0061 (17) | −0.0067 (16) |
C34 | 0.066 (2) | 0.0612 (19) | 0.054 (2) | −0.0095 (18) | −0.0049 (17) | −0.0082 (17) |
O35 | 0.0575 (13) | 0.0641 (14) | 0.0861 (18) | −0.0039 (12) | −0.0028 (13) | −0.0074 (16) |
Geometric parameters (Å, º) top
O1—C9 | 1.393 (3) | C61—H613 | 0.9600 |
O1—P2 | 1.594 (2) | C7—C8 | 1.376 (5) |
P2—O21 | 1.462 (2) | C7—H7 | 0.94 (4) |
P2—O22 | 1.570 (2) | C8—C9 | 1.388 (4) |
P2—C3 | 1.750 (3) | C8—H8 | 1.09 (4) |
O22—C23 | 1.472 (4) | C9—C10 | 1.380 (4) |
C23—H231 | 0.9600 | C31—N32 | 1.320 (4) |
C23—H233 | 0.9600 | C31—C311 | 1.499 (4) |
C23—H232 | 0.9600 | C311—H311 | 0.9600 |
C3—C31 | 1.418 (4) | C311—H312 | 0.9600 |
C3—C4 | 1.436 (4) | C311—H313 | 0.9600 |
C4—O4 | 1.253 (3) | N32—C33 | 1.463 (4) |
C4—C10 | 1.492 (4) | N32—H32 | 1.05 (5) |
C5—C6 | 1.375 (4) | C33—C34 | 1.502 (5) |
C5—C10 | 1.406 (4) | C33—H331 | 1.02 (4) |
C5—H5 | 0.93 (3) | C33—H332 | 0.98 (4) |
C6—C7 | 1.390 (5) | C34—O35 | 1.404 (4) |
C6—C61 | 1.513 (4) | C34—H341 | 1.01 (3) |
C61—H611 | 0.9600 | C34—H342 | 1.12 (5) |
C61—H612 | 0.9600 | O35—H35 | 0.94 (5) |
| | | |
C9—O1—P2 | 121.11 (17) | C7—C8—C9 | 118.9 (3) |
O21—P2—O22 | 114.48 (16) | C7—C8—H8 | 124 (2) |
O21—P2—O1 | 107.20 (12) | C9—C8—H8 | 117 (2) |
O22—P2—O1 | 104.79 (13) | C10—C9—C8 | 121.8 (3) |
O21—P2—C3 | 119.37 (16) | C10—C9—O1 | 121.5 (3) |
O22—P2—C3 | 104.52 (14) | C8—C9—O1 | 116.7 (3) |
O1—P2—C3 | 105.23 (12) | C9—C10—C5 | 117.5 (3) |
C23—O22—P2 | 118.4 (2) | C9—C10—C4 | 123.0 (2) |
O22—C23—H231 | 109.5 | C5—C10—C4 | 119.4 (3) |
O22—C23—H233 | 109.5 | N32—C31—C3 | 120.0 (3) |
H231—C23—H233 | 109.5 | N32—C31—C311 | 116.6 (3) |
O22—C23—H232 | 109.5 | C3—C31—C311 | 123.5 (3) |
H231—C23—H232 | 109.5 | C31—C311—H311 | 109.5 |
H233—C23—H232 | 109.5 | C31—C311—H312 | 109.5 |
C31—C3—C4 | 121.2 (3) | H311—C311—H312 | 109.5 |
C31—C3—P2 | 120.9 (2) | C31—C311—H313 | 109.5 |
C4—C3—P2 | 117.8 (2) | H311—C311—H313 | 109.5 |
O4—C4—C3 | 122.9 (3) | H312—C311—H313 | 109.5 |
O4—C4—C10 | 117.3 (2) | C31—N32—C33 | 127.9 (3) |
C3—C4—C10 | 119.8 (3) | C31—N32—H32 | 115 (3) |
C6—C5—C10 | 122.1 (3) | C33—N32—H32 | 116 (3) |
C6—C5—H5 | 124 (2) | N32—C33—C34 | 108.5 (3) |
C10—C5—H5 | 114 (2) | N32—C33—H331 | 111 (2) |
C5—C6—C7 | 118.1 (3) | C34—C33—H331 | 111 (2) |
C5—C6—C61 | 121.5 (3) | N32—C33—H332 | 115 (2) |
C7—C6—C61 | 120.3 (3) | C34—C33—H332 | 108 (2) |
C6—C61—H611 | 109.5 | H331—C33—H332 | 103 (3) |
C6—C61—H612 | 109.5 | O35—C34—C33 | 112.8 (3) |
H611—C61—H612 | 109.5 | O35—C34—H341 | 112 (2) |
C6—C61—H613 | 109.5 | C33—C34—H341 | 106 (2) |
H611—C61—H613 | 109.5 | O35—C34—H342 | 111 (3) |
H612—C61—H613 | 109.5 | C33—C34—H342 | 103 (2) |
C8—C7—C6 | 121.6 (3) | H341—C34—H342 | 111 (3) |
C8—C7—H7 | 120 (2) | C34—O35—H35 | 113 (3) |
C6—C7—H7 | 118 (2) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N32—H32···O4 | 1.05 (5) | 1.71 (5) | 2.575 (3) | 136 (4) |
N32—H32···O35 | 1.05 (5) | 2.39 (5) | 2.801 (4) | 102 (4) |
O35—H35···O21i | 0.94 (5) | 1.87 (5) | 2.768 (4) | 162 (5) |
Symmetry code: (i) −x+1, y−1/2, −z+3/2. |
Experimental details
| (I) | (II) |
Crystal data |
Chemical formula | C13H16NO5P | C14H18NO5P |
Mr | 297.24 | 311.26 |
Crystal system, space group | Orthorhombic, P212121 | Orthorhombic, P212121 |
Temperature (K) | 293 | 293 |
a, b, c (Å) | 9.325 (1), 9.662 (1), 15.619 (2) | 11.071 (1), 16.190 (2), 8.490 (1) |
V (Å3) | 1407.4 (1) | 1521.7 (3) |
Z | 4 | 4 |
Radiation type | Cu Kα | Cu Kα |
µ (mm−1) | 1.92 | 1.80 |
Crystal size (mm) | 0.2 × 0.1 × 0.1 | 0.6 × 0.3 × 0.3 |
|
Data collection |
Diffractometer | AFC5S Rigaku diffractometer | AFC5S Rigaku diffractometer |
Absorption correction | Analytical (De Meulenar & Tompa, 1965) | Analytical (De Meulenar & Tompa, 1965) |
Tmin, Tmax | 0.712, 0.841 | 0.505, 0.650 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8498, 2402, 1664 | 1669, 1669, 1450 |
Rint | 0.064 | 0.000 |
(sin θ/λ)max (Å−1) | 0.593 | 0.619 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.064, 0.157, 1.23 | 0.034, 0.097, 1.02 |
No. of reflections | 2402 | 1669 |
No. of parameters | 224 | 230 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.42, −0.62 | 0.17, −0.20 |
Absolute structure | (Flack, 1983) | (Flack, 1983) |
Absolute structure parameter | 0.00 (5) | −0.01 (4) |
Selected geometric parameters (Å, º) for (I) topO1—C9 | 1.377 (6) | C4—O4 | 1.259 (6) |
O1—P2 | 1.600 (3) | C4—C10 | 1.482 (6) |
P2—O21 | 1.451 (4) | C9—C10 | 1.413 (6) |
P2—O22 | 1.561 (4) | C31—N32 | 1.316 (6) |
P2—C3 | 1.754 (5) | C31—C311 | 1.492 (8) |
O22—C23 | 1.461 (6) | N32—C33 | 1.451 (6) |
C3—C31 | 1.428 (6) | C33—C34 | 1.483 (8) |
C3—C4 | 1.432 (7) | C34—O35 | 1.405 (7) |
| | | |
C9—O1—P2 | 120.9 (3) | O4—C4—C3 | 122.7 (4) |
O21—P2—O22 | 113.7 (2) | O4—C4—C10 | 116.2 (4) |
O21—P2—O1 | 107.7 (2) | C3—C4—C10 | 121.0 (4) |
O22—P2—O1 | 104.9 (2) | C9—C10—C4 | 121.3 (4) |
O21—P2—C3 | 119.3 (2) | N32—C31—C3 | 119.6 (5) |
O22—P2—C3 | 105.3 (2) | N32—C31—C311 | 117.5 (5) |
O1—P2—C3 | 104.6 (2) | C3—C31—C311 | 122.9 (4) |
C23—O22—P2 | 119.6 (4) | C31—N32—C33 | 128.1 (5) |
C31—C3—C4 | 122.0 (4) | N32—C33—C34 | 110.4 (5) |
C31—C3—P2 | 120.4 (4) | O35—C34—C33 | 113.5 (5) |
C4—C3—P2 | 117.6 (3) | | |
Hydrogen-bond geometry (Å, º) for (I) top
D—H···A | D—H | H···A | D···A | D—H···A |
N32—H32···O4 | 0.97 (6) | 1.76 (6) | 2.601 (6) | 143 (5) |
N32—H32···O35 | 0.97 (6) | 2.46 (6) | 2.797 (6) | 100 (4) |
O35—H35···O21i | 0.68 (6) | 2.25 (7) | 2.790 (6) | 137 (7) |
Symmetry code: (i) −x+3/2, −y+1, z−1/2. |
Selected geometric parameters (Å, º) for (II) topO1—C9 | 1.393 (3) | C4—O4 | 1.253 (3) |
O1—P2 | 1.594 (2) | C4—C10 | 1.492 (4) |
P2—O21 | 1.462 (2) | C9—C10 | 1.380 (4) |
P2—O22 | 1.570 (2) | C31—N32 | 1.320 (4) |
P2—C3 | 1.750 (3) | C31—C311 | 1.499 (4) |
O22—C23 | 1.472 (4) | N32—C33 | 1.463 (4) |
C3—C31 | 1.418 (4) | C33—C34 | 1.502 (5) |
C3—C4 | 1.436 (4) | C34—O35 | 1.404 (4) |
| | | |
C9—O1—P2 | 121.11 (17) | O4—C4—C3 | 122.9 (3) |
O21—P2—O22 | 114.48 (16) | O4—C4—C10 | 117.3 (2) |
O21—P2—O1 | 107.20 (12) | C3—C4—C10 | 119.8 (3) |
O22—P2—O1 | 104.79 (13) | C10—C9—O1 | 121.5 (3) |
O21—P2—C3 | 119.37 (16) | C9—C10—C4 | 123.0 (2) |
O22—P2—C3 | 104.52 (14) | N32—C31—C3 | 120.0 (3) |
O1—P2—C3 | 105.23 (12) | N32—C31—C311 | 116.6 (3) |
C23—O22—P2 | 118.4 (2) | C3—C31—C311 | 123.5 (3) |
C31—C3—C4 | 121.2 (3) | C31—N32—C33 | 127.9 (3) |
C31—C3—P2 | 120.9 (2) | N32—C33—C34 | 108.5 (3) |
C4—C3—P2 | 117.8 (2) | O35—C34—C33 | 112.8 (3) |
Hydrogen-bond geometry (Å, º) for (II) top
D—H···A | D—H | H···A | D···A | D—H···A |
N32—H32···O4 | 1.05 (5) | 1.71 (5) | 2.575 (3) | 136 (4) |
N32—H32···O35 | 1.05 (5) | 2.39 (5) | 2.801 (4) | 102 (4) |
O35—H35···O21i | 0.94 (5) | 1.87 (5) | 2.768 (4) | 162 (5) |
Symmetry code: (i) −x+1, y−1/2, −z+3/2. |
The aminophosphonic acids are the synthetic analogues of the natural amino acids in which the carboxylic acid group is replaced by phosphonic acid group. The aminophosphonic acids, their esters and salts have very attractive significant attention owing to their synthetic and biological value both as agrochemical (herbicides, pesticides, growth regulator in plants) and medical (antibiotics, antivirals, enzyme inhibitors) products with broad applications (Kalir & Kalir, 1996; Hudson & Pianka, 1996; Kukhar & Hudson, 1999).
In our previous work we described the reaction of the 2-methyl-4-oxo-4H-chromen-3-yl-phosphonate, (Ia), and 2,6-dimethyl-4-oxo-4H-chromen-3-yl-phosphonate, (IIa), with 2-hydroxyethylamine (Budzisz et al., 2001). In this reaction we obtained cyclic 2-aminophosphonic analogues of chromone of 2-methoxy-3-[1(2-hydroxyethylamine)ethylidene]-2,3-dihydro-2,4-dioxo-2λ5– benzo[e][1,2]oxaphosphinane, (I), and 2-methoxy-6-methyl-3-[1(2-hydroxyethyl amine)ethylidene]-2,3-dihydro-2,4-dioxo-2λ5-benzo[e][1,2]oxaphosphinane, (II) general structure (Budzisz & Pastuszko, 1999; Budzisz et al., 2001). The obtained compounds exhibited alkylation properties in the NBS-test (Preussman et al., 1969). \sch
In the series of IR spectra determined in chloroform, the derivatives of benzo[1,2]oxaphosphinane in various concentrations (1 mM to 100 mM) confirm the presence of a strong intramolecular hydrogen bond exhibiting a broad band at ν 3430–3450 cm-1.
The X-ray structural investigation on two derivatives of benzo[1,2]oxaphosphinane has been carried out in continuation of our studies (Budzisz et al., 2001). The titled structures consist of a benzene ring fused with an oxaphosphinane ring. The hydroxyethylamine ethylidyne group is attached at position 3 in both molecules. In (II), the benzene ring is substituted by a methyl group at position 6.
The oxaphosphinane rings have half-chair conformation. The puckering parameters (Cremer & Pople, 1975) are QT = 0.383 (3) Å, ϕ2 = 32.1 (8)°, θ2 = 67.1 (7)° in (I) and QT = 0.360 (2) Å, ϕ2 = 38.7 (5)°, θ2 = 65.8 (7)° in (II), corresponding to the O1—P2—C3—C4—C10—C9 atom sequence, with twofold pseudo-axis passing through the midpoints of P2—O1 and C4—C10 bonds; asymmetry parameters (Nardelli, 1983) Δ2 = 0.009 (2) for (I) and Δ2 = 0.025 (1) for (II).
An intramolecular hydrogen bond, N32—H32···O4 and N32—H32···O35, is observed in both molecules which closes the extra six- and five-membered rings, respectively. The six-membered rings are planar, whereas conformation of the five-membered rings is C34 deformed envelope (I) and N32 twist (II) [asymmetry parameters (Nardelli, 1983a) Δs = 0.04 (1) for (I), and Δ2 = 0.05 (1) for (II). The puckering parameters (Cremer & Pople, 1975) are: q2 = 0.42 (1) Å, ϕ2 = -137 (5)°, in (I) and q2 = 0.49 (1) Å, ϕ2 = -130 (3)°, in (II), corresponding to C33—C34—O35—H32—N32 sequence.
The P atom has a slightly distorted tetrahedral geometry towards trigonal pyramidal with an elongated C3—P2 apical bond.
Bond distances and angles in both molecules are in a good agreement with expected values (Allen et al., 1987). The ORTEP drawings of molecules (I) and (II) with the atomic numbering scheme are given in Figs. 1–2