Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270113009633/mx3092sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270113009633/mx3092Isup2.hkl |
CCDC reference: 950421
For the preparation of [bis(2,5-dioxopyrrolidin-1-yl) 2,2'-bipyridine-4,4'-dicarboxylate]chlorido(η5-pentamethylcyclopentadienyl)rhodium(III) chloride, (II), {Cp*Rh(µ-Cl)Cl}2 (0.028 g, 0.045 mmol) was added to a solution of bis(2,5-dioxopyrrolidin-1-yl)-2,2'-bipyridine-4,4'-dicarboxylic acid (0.040 g, 0.091 mmol) in methanol (5 ml) under an N2 atmosphere. The colour of the reaction mixture slowly turned to yellow–orange from red–brown. After 3 h of additional stirring at room temperature, the volume was reduced to 2 ml and upon addition of diethyl ether (10 ml) a yellow–orange precipitate of (II) was obtained (yield: 0.055 g, 82%). 1H NMR: (CD3OD): δ 9.22 (d, 2H), 9.10 (s, 2H), 8.32 (d, 2H), 2.95 (s, 8H), 1.71 (s, 15H).
For the synthesis of the title compound, (I), NaOMe (14.0 mg, 0.268 mmol) was added to a solution of (II) (0.100 g, 0.134 mmol) in MeOH (5 ml) and the resulting mixture stirred for 2 h under an N2 atmosphere. The volume of the resulting orange–yellow solution was reduced to 2 ml and precipitated with diethyl ether; crystals were collected from a methanol and diethyl ether diffusion system (yield: 0.082 g, 76%). 1H NMR (CD3OD): δ 9.20 (d, 2H), 9.08 (s, 2H), 8.36 (d, 2H), 4.09 (s, 6H), 2.64 (s, 8H), 1.77 (s, 15H). MS–ESI: m/z 545.10 [Cp*(bpyCOOMe)RhCl]+.
The hydroxy H atoms were located in a difference electron-density map and were refined using O—H distance restraints of 0.84 (2) Å [Uiso(H) = 1.5Ueq(O)]. Distance restraints were also applied to the N···H distances to harmonize the two N—O—H angles (applied s.u. = 0.02 Å). All other H atoms were introduced at their calculated positions and were then refined as riding, with C—H = 0.95 Å and Uiso(H) = 1.2Ueq(C) for aromatic, and C—H = 0.98 Å and Uiso(H) = 1.5Ueq(C) for methyl H atoms. Two reflections affected by the beam stop and with (Io-Ic)/ΣW > 10 were excluded from the refinement.
Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
[Rh(C10H15)Cl(C14H12N2O4)]Cl·2C4H5NO3 | F(000) = 1664 |
Mr = 811.47 | Dx = 1.557 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 3791 reflections |
a = 8.6511 (7) Å | θ = 2.4–23.9° |
b = 33.613 (3) Å | µ = 0.71 mm−1 |
c = 11.9147 (9) Å | T = 200 K |
β = 92.723 (2)° | Block, yellow |
V = 3460.8 (5) Å3 | 0.19 × 0.15 × 0.09 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 6273 independent reflections |
Radiation source: fine-focus sealed tube | 3649 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.096 |
ϕ and ω scans | θmax = 25.3°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −10→9 |
Tmin = 0.77, Tmax = 1.00 | k = −35→40 |
20576 measured reflections | l = −14→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.050 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.089 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.85 | w = 1/[σ2(Fo2) + (0.0114P)2] where P = (Fo2 + 2Fc2)/3 |
6273 reflections | (Δ/σ)max = 0.001 |
457 parameters | Δρmax = 0.71 e Å−3 |
4 restraints | Δρmin = −0.60 e Å−3 |
[Rh(C10H15)Cl(C14H12N2O4)]Cl·2C4H5NO3 | V = 3460.8 (5) Å3 |
Mr = 811.47 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 8.6511 (7) Å | µ = 0.71 mm−1 |
b = 33.613 (3) Å | T = 200 K |
c = 11.9147 (9) Å | 0.19 × 0.15 × 0.09 mm |
β = 92.723 (2)° |
Bruker SMART CCD area-detector diffractometer | 6273 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | 3649 reflections with I > 2σ(I) |
Tmin = 0.77, Tmax = 1.00 | Rint = 0.096 |
20576 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | 4 restraints |
wR(F2) = 0.089 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.85 | Δρmax = 0.71 e Å−3 |
6273 reflections | Δρmin = −0.60 e Å−3 |
457 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Rh1 | 0.78349 (5) | 0.106934 (13) | 0.86490 (3) | 0.03094 (13) | |
Cl1 | 0.65184 (15) | 0.04482 (4) | 0.87279 (11) | 0.0403 (4) | |
C1 | 0.8345 (6) | 0.16191 (16) | 0.7846 (5) | 0.0387 (14) | |
C2 | 0.7246 (6) | 0.13983 (16) | 0.7138 (4) | 0.0346 (14) | |
C3 | 0.5889 (6) | 0.13536 (16) | 0.7747 (5) | 0.0421 (15) | |
C4 | 0.6148 (6) | 0.15318 (17) | 0.8824 (4) | 0.0410 (15) | |
C5 | 0.7669 (6) | 0.17015 (16) | 0.8858 (4) | 0.0408 (15) | |
C6 | 0.9905 (6) | 0.17563 (18) | 0.7510 (5) | 0.065 (2) | |
H6A | 0.9802 | 0.2013 | 0.7122 | 0.098* | |
H6B | 1.0341 | 0.1560 | 0.7007 | 0.098* | |
H6C | 1.0593 | 0.1786 | 0.8182 | 0.098* | |
C7 | 0.7411 (7) | 0.12702 (18) | 0.5939 (4) | 0.0598 (19) | |
H7A | 0.7050 | 0.0995 | 0.5846 | 0.090* | |
H7B | 0.8501 | 0.1287 | 0.5754 | 0.090* | |
H7C | 0.6790 | 0.1445 | 0.5438 | 0.090* | |
C8 | 0.4440 (6) | 0.11496 (18) | 0.7324 (5) | 0.068 (2) | |
H8A | 0.3751 | 0.1343 | 0.6943 | 0.101* | |
H8B | 0.3920 | 0.1032 | 0.7958 | 0.101* | |
H8C | 0.4699 | 0.0940 | 0.6795 | 0.101* | |
C9 | 0.4956 (6) | 0.15783 (19) | 0.9695 (5) | 0.070 (2) | |
H9A | 0.4288 | 0.1343 | 0.9688 | 0.105* | |
H9B | 0.4326 | 0.1815 | 0.9524 | 0.105* | |
H9C | 0.5476 | 0.1608 | 1.0439 | 0.105* | |
C10 | 0.8395 (7) | 0.19398 (17) | 0.9791 (5) | 0.0610 (19) | |
H10A | 0.9474 | 0.1856 | 0.9925 | 0.092* | |
H10B | 0.7828 | 0.1898 | 1.0474 | 0.092* | |
H10C | 0.8363 | 0.2222 | 0.9590 | 0.092* | |
N1 | 0.9787 (4) | 0.07340 (12) | 0.8253 (3) | 0.0322 (11) | |
N2 | 0.8838 (4) | 0.09196 (12) | 1.0242 (3) | 0.0299 (10) | |
C11 | 1.0219 (6) | 0.06564 (16) | 0.7213 (4) | 0.0375 (14) | |
H11 | 0.9670 | 0.0781 | 0.6600 | 0.045* | |
C12 | 1.1414 (6) | 0.04056 (16) | 0.6988 (4) | 0.0383 (14) | |
H12 | 1.1698 | 0.0364 | 0.6236 | 0.046* | |
C13 | 1.2202 (5) | 0.02143 (15) | 0.7866 (4) | 0.0297 (13) | |
C14 | 1.1786 (5) | 0.02899 (15) | 0.8956 (4) | 0.0281 (12) | |
H14 | 1.2316 | 0.0162 | 0.9573 | 0.034* | |
C15 | 1.0587 (5) | 0.05538 (15) | 0.9137 (4) | 0.0283 (12) | |
C16 | 1.0030 (5) | 0.06593 (15) | 1.0247 (4) | 0.0253 (12) | |
C17 | 1.0669 (5) | 0.05041 (15) | 1.1242 (4) | 0.0297 (13) | |
H17 | 1.1486 | 0.0316 | 1.1224 | 0.036* | |
C18 | 1.0120 (5) | 0.06233 (15) | 1.2262 (4) | 0.0278 (12) | |
C19 | 0.8927 (5) | 0.08931 (15) | 1.2246 (4) | 0.0323 (13) | |
H19 | 0.8524 | 0.0982 | 1.2929 | 0.039* | |
C20 | 0.8315 (5) | 0.10344 (15) | 1.1226 (4) | 0.0308 (12) | |
H20 | 0.7489 | 0.1221 | 1.1228 | 0.037* | |
C21 | 1.3446 (6) | −0.00814 (17) | 0.7605 (5) | 0.0360 (14) | |
O1 | 1.3874 (4) | −0.01352 (13) | 0.6688 (3) | 0.0542 (12) | |
O2 | 1.3914 (4) | −0.02777 (10) | 0.8519 (3) | 0.0364 (9) | |
C22 | 1.5114 (6) | −0.05696 (17) | 0.8359 (5) | 0.0504 (16) | |
H22A | 1.4693 | −0.0789 | 0.7897 | 0.076* | |
H22B | 1.5492 | −0.0673 | 0.9091 | 0.076* | |
H22C | 1.5971 | −0.0445 | 0.7981 | 0.076* | |
C23 | 1.0749 (6) | 0.04641 (16) | 1.3366 (4) | 0.0316 (13) | |
O3 | 1.0268 (4) | 0.05493 (11) | 1.4253 (3) | 0.0440 (10) | |
O4 | 1.1866 (4) | 0.02016 (11) | 1.3192 (3) | 0.0381 (9) | |
C24 | 1.2627 (6) | 0.00215 (17) | 1.4178 (4) | 0.0511 (17) | |
H24A | 1.3196 | 0.0226 | 1.4613 | 0.077* | |
H24B | 1.3349 | −0.0184 | 1.3943 | 0.077* | |
H24C | 1.1849 | −0.0099 | 1.4643 | 0.077* | |
N3S | 0.1944 (5) | 0.35082 (15) | 0.8207 (4) | 0.0456 (13) | |
C29 | 0.1335 (6) | 0.33124 (19) | 0.7271 (5) | 0.0477 (17) | |
C30 | 0.0106 (6) | 0.30341 (18) | 0.7693 (5) | 0.0505 (17) | |
H30A | 0.0324 | 0.2756 | 0.7482 | 0.061* | |
H30B | −0.0932 | 0.3109 | 0.7375 | 0.061* | |
C31 | 0.0189 (6) | 0.30825 (18) | 0.8965 (5) | 0.0517 (17) | |
H31A | −0.0836 | 0.3158 | 0.9235 | 0.062* | |
H31B | 0.0522 | 0.2831 | 0.9334 | 0.062* | |
C32 | 0.1343 (6) | 0.34034 (19) | 0.9220 (5) | 0.0462 (16) | |
O2S | 0.3018 (5) | 0.38108 (13) | 0.8126 (4) | 0.0628 (13) | |
O3S | 0.1762 (5) | 0.35474 (13) | 1.0108 (3) | 0.0636 (13) | |
O1S | 0.1724 (4) | 0.33561 (15) | 0.6320 (3) | 0.0763 (15) | |
O6S | 0.6317 (5) | 0.25143 (14) | 0.8206 (4) | 0.0542 (11) | |
O5S | 0.3085 (4) | 0.24794 (13) | 0.8166 (3) | 0.0623 (13) | |
N4S | 0.5362 (5) | 0.24186 (13) | 0.7278 (4) | 0.0408 (12) | |
C28 | 0.3778 (7) | 0.24062 (18) | 0.7347 (5) | 0.0467 (16) | |
O4S | 0.7295 (5) | 0.22848 (12) | 0.6100 (4) | 0.0660 (13) | |
C25 | 0.5955 (7) | 0.22991 (17) | 0.6276 (5) | 0.0451 (16) | |
C27 | 0.3160 (6) | 0.22997 (18) | 0.6198 (4) | 0.0518 (17) | |
H27A | 0.2590 | 0.2527 | 0.5849 | 0.062* | |
H27B | 0.2449 | 0.2070 | 0.6228 | 0.062* | |
C26 | 0.4568 (7) | 0.21946 (19) | 0.5524 (4) | 0.0576 (18) | |
H26A | 0.4570 | 0.1908 | 0.5336 | 0.069* | |
H26B | 0.4565 | 0.2350 | 0.4818 | 0.069* | |
Cl2 | 0.60900 (15) | 0.33924 (4) | 0.80009 (12) | 0.0464 (4) | |
H2S | 0.381 (4) | 0.3683 (14) | 0.794 (7) | 0.16 (4)* | |
H6S | 0.629 (7) | 0.2769 (5) | 0.816 (5) | 0.09 (3)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Rh1 | 0.0344 (2) | 0.0325 (3) | 0.0258 (2) | 0.0026 (2) | −0.00025 (17) | 0.0021 (2) |
Cl1 | 0.0466 (9) | 0.0358 (9) | 0.0380 (8) | −0.0042 (7) | −0.0034 (7) | 0.0010 (7) |
C1 | 0.038 (3) | 0.032 (4) | 0.046 (4) | 0.000 (3) | 0.003 (3) | 0.005 (3) |
C2 | 0.042 (3) | 0.033 (4) | 0.028 (3) | 0.006 (3) | 0.001 (3) | 0.008 (3) |
C3 | 0.040 (4) | 0.036 (4) | 0.049 (4) | −0.001 (3) | −0.011 (3) | 0.018 (3) |
C4 | 0.045 (4) | 0.048 (4) | 0.031 (3) | 0.023 (3) | 0.002 (3) | 0.009 (3) |
C5 | 0.055 (4) | 0.031 (4) | 0.036 (4) | 0.007 (3) | −0.007 (3) | 0.003 (3) |
C6 | 0.054 (4) | 0.056 (5) | 0.087 (5) | −0.005 (3) | 0.008 (4) | 0.021 (4) |
C7 | 0.086 (5) | 0.057 (5) | 0.036 (4) | 0.011 (4) | −0.002 (3) | 0.000 (3) |
C8 | 0.049 (4) | 0.070 (5) | 0.080 (5) | −0.014 (4) | −0.032 (3) | 0.032 (4) |
C9 | 0.069 (5) | 0.078 (6) | 0.065 (5) | 0.039 (4) | 0.022 (4) | 0.021 (4) |
C10 | 0.085 (5) | 0.043 (4) | 0.052 (4) | 0.013 (4) | −0.022 (4) | −0.009 (3) |
N1 | 0.038 (3) | 0.035 (3) | 0.024 (2) | −0.003 (2) | −0.002 (2) | 0.001 (2) |
N2 | 0.035 (3) | 0.030 (3) | 0.024 (2) | 0.003 (2) | 0.000 (2) | −0.001 (2) |
C11 | 0.041 (3) | 0.050 (4) | 0.020 (3) | 0.003 (3) | −0.002 (3) | 0.003 (3) |
C12 | 0.044 (4) | 0.046 (4) | 0.025 (3) | 0.006 (3) | 0.003 (3) | −0.003 (3) |
C13 | 0.031 (3) | 0.032 (3) | 0.026 (3) | 0.001 (2) | 0.004 (2) | −0.001 (3) |
C14 | 0.029 (3) | 0.032 (3) | 0.023 (3) | 0.001 (2) | −0.002 (2) | 0.005 (2) |
C15 | 0.026 (3) | 0.035 (4) | 0.024 (3) | −0.007 (2) | −0.001 (2) | 0.001 (3) |
C16 | 0.031 (3) | 0.027 (3) | 0.018 (3) | −0.001 (2) | 0.000 (2) | −0.001 (2) |
C17 | 0.031 (3) | 0.035 (4) | 0.024 (3) | 0.001 (2) | 0.003 (2) | 0.000 (3) |
C18 | 0.028 (3) | 0.030 (3) | 0.025 (3) | −0.007 (2) | −0.005 (2) | −0.001 (2) |
C19 | 0.037 (3) | 0.038 (4) | 0.023 (3) | −0.001 (3) | 0.007 (2) | −0.006 (3) |
C20 | 0.032 (3) | 0.031 (3) | 0.030 (3) | 0.000 (3) | 0.005 (2) | 0.002 (3) |
C21 | 0.031 (3) | 0.047 (4) | 0.030 (3) | −0.004 (3) | 0.001 (3) | −0.002 (3) |
O1 | 0.050 (3) | 0.087 (4) | 0.026 (2) | 0.020 (2) | 0.0094 (19) | −0.006 (2) |
O2 | 0.038 (2) | 0.036 (2) | 0.036 (2) | 0.0096 (18) | 0.0063 (17) | −0.0004 (19) |
C22 | 0.045 (4) | 0.048 (4) | 0.058 (4) | 0.010 (3) | 0.005 (3) | 0.003 (3) |
C23 | 0.031 (3) | 0.034 (4) | 0.030 (3) | −0.001 (3) | 0.003 (3) | −0.003 (3) |
O3 | 0.049 (2) | 0.062 (3) | 0.022 (2) | 0.010 (2) | 0.0039 (18) | 0.001 (2) |
O4 | 0.043 (2) | 0.046 (3) | 0.025 (2) | 0.0123 (19) | −0.0002 (17) | 0.0041 (18) |
C24 | 0.044 (4) | 0.076 (5) | 0.033 (3) | 0.019 (3) | 0.000 (3) | 0.005 (3) |
N3S | 0.030 (3) | 0.050 (4) | 0.057 (3) | −0.001 (2) | 0.003 (3) | 0.002 (3) |
C29 | 0.031 (4) | 0.068 (5) | 0.044 (4) | 0.015 (3) | 0.002 (3) | 0.003 (4) |
C30 | 0.041 (4) | 0.057 (5) | 0.053 (4) | −0.003 (3) | −0.003 (3) | −0.007 (3) |
C31 | 0.044 (4) | 0.062 (5) | 0.049 (4) | −0.010 (3) | −0.001 (3) | 0.010 (3) |
C32 | 0.040 (4) | 0.056 (5) | 0.043 (4) | 0.009 (3) | 0.001 (3) | 0.012 (4) |
O2S | 0.046 (3) | 0.052 (3) | 0.090 (4) | −0.003 (2) | 0.008 (3) | 0.013 (3) |
O3S | 0.068 (3) | 0.073 (4) | 0.048 (3) | −0.007 (2) | −0.012 (2) | −0.002 (3) |
O1S | 0.063 (3) | 0.121 (5) | 0.046 (3) | −0.002 (3) | 0.016 (2) | 0.001 (3) |
O6S | 0.054 (3) | 0.048 (3) | 0.059 (3) | 0.006 (2) | −0.018 (2) | −0.002 (3) |
O5S | 0.050 (3) | 0.090 (4) | 0.047 (3) | −0.002 (2) | 0.008 (2) | −0.012 (3) |
N4S | 0.040 (3) | 0.043 (3) | 0.038 (3) | 0.004 (2) | −0.006 (2) | −0.001 (2) |
C28 | 0.046 (4) | 0.056 (5) | 0.037 (4) | 0.003 (3) | −0.005 (3) | −0.004 (3) |
O4S | 0.054 (3) | 0.058 (3) | 0.088 (4) | 0.008 (2) | 0.028 (3) | 0.017 (3) |
C25 | 0.050 (4) | 0.034 (4) | 0.053 (4) | 0.000 (3) | 0.014 (4) | 0.016 (3) |
C27 | 0.053 (4) | 0.067 (5) | 0.035 (4) | 0.003 (3) | −0.003 (3) | −0.005 (3) |
C26 | 0.074 (5) | 0.067 (5) | 0.032 (4) | 0.021 (4) | 0.000 (3) | 0.000 (3) |
Cl2 | 0.0411 (9) | 0.0464 (10) | 0.0519 (9) | −0.0014 (7) | 0.0046 (7) | 0.0091 (8) |
Rh1—N1 | 2.102 (4) | C16—C17 | 1.386 (6) |
Rh1—N2 | 2.110 (4) | C17—C18 | 1.385 (6) |
Rh1—C1 | 2.136 (5) | C17—H17 | 0.9500 |
Rh1—C5 | 2.145 (5) | C18—C19 | 1.373 (6) |
Rh1—C4 | 2.149 (5) | C18—C23 | 1.498 (6) |
Rh1—C2 | 2.153 (5) | C19—C20 | 1.386 (6) |
Rh1—C3 | 2.175 (5) | C19—H19 | 0.9500 |
Rh1—Cl1 | 2.3823 (14) | C20—H20 | 0.9500 |
C1—C5 | 1.393 (7) | C21—O1 | 1.184 (5) |
C1—C2 | 1.446 (7) | C21—O2 | 1.321 (6) |
C1—C6 | 1.499 (7) | O2—C22 | 1.448 (5) |
C2—C3 | 1.417 (7) | C22—H22A | 0.9800 |
C2—C7 | 1.505 (7) | C22—H22B | 0.9800 |
C3—C4 | 1.425 (7) | C22—H22C | 0.9800 |
C3—C8 | 1.495 (7) | C23—O3 | 1.190 (5) |
C4—C5 | 1.433 (7) | C23—O4 | 1.332 (6) |
C4—C9 | 1.505 (7) | O4—C24 | 1.451 (5) |
C5—C10 | 1.485 (7) | C24—H24A | 0.9800 |
C6—H6A | 0.9800 | C24—H24B | 0.9800 |
C6—H6B | 0.9800 | C24—H24C | 0.9800 |
C6—H6C | 0.9800 | N3S—C29 | 1.378 (7) |
C7—H7A | 0.9800 | N3S—C32 | 1.382 (7) |
C7—H7B | 0.9800 | N3S—O2S | 1.384 (6) |
C7—H7C | 0.9800 | C29—O1S | 1.206 (6) |
C8—H8A | 0.9800 | C29—C30 | 1.520 (7) |
C8—H8B | 0.9800 | C30—C31 | 1.523 (7) |
C8—H8C | 0.9800 | C30—H30A | 0.9900 |
C9—H9A | 0.9800 | C30—H30B | 0.9900 |
C9—H9B | 0.9800 | C31—C32 | 1.491 (7) |
C9—H9C | 0.9800 | C31—H31A | 0.9900 |
C10—H10A | 0.9800 | C31—H31B | 0.9900 |
C10—H10B | 0.9800 | C32—O3S | 1.204 (6) |
C10—H10C | 0.9800 | O2S—H2S | 0.851 (16) |
N1—C11 | 1.337 (6) | O6S—N4S | 1.386 (5) |
N1—C15 | 1.373 (5) | O6S—H6S | 0.859 (16) |
N2—C20 | 1.334 (5) | O5S—C28 | 1.195 (6) |
N2—C16 | 1.353 (5) | N4S—C28 | 1.378 (6) |
C11—C12 | 1.371 (6) | N4S—C25 | 1.381 (7) |
C11—H11 | 0.9500 | C28—C27 | 1.490 (7) |
C12—C13 | 1.380 (6) | O4S—C25 | 1.189 (6) |
C12—H12 | 0.9500 | C25—C26 | 1.505 (7) |
C13—C14 | 1.387 (6) | C27—C26 | 1.532 (7) |
C13—C21 | 1.508 (7) | C27—H27A | 0.9900 |
C14—C15 | 1.390 (6) | C27—H27B | 0.9900 |
C14—H14 | 0.9500 | C26—H26A | 0.9900 |
C15—C16 | 1.472 (6) | C26—H26B | 0.9900 |
N1—Rh1—N2 | 76.91 (15) | N1—C11—C12 | 123.2 (5) |
N1—Rh1—C1 | 100.26 (18) | N1—C11—H11 | 118.4 |
N2—Rh1—C1 | 121.61 (18) | C12—C11—H11 | 118.4 |
N1—Rh1—C5 | 128.03 (19) | C11—C12—C13 | 119.2 (5) |
N2—Rh1—C5 | 99.14 (18) | C11—C12—H12 | 120.4 |
C1—Rh1—C5 | 37.96 (19) | C13—C12—H12 | 120.4 |
N1—Rh1—C4 | 165.01 (19) | C12—C13—C14 | 119.0 (5) |
N2—Rh1—C4 | 109.71 (18) | C12—C13—C21 | 118.8 (5) |
C1—Rh1—C4 | 64.8 (2) | C14—C13—C21 | 122.2 (5) |
C5—Rh1—C4 | 38.99 (19) | C13—C14—C15 | 119.4 (4) |
N1—Rh1—C2 | 104.38 (18) | C13—C14—H14 | 120.3 |
N2—Rh1—C2 | 160.99 (18) | C15—C14—H14 | 120.3 |
C1—Rh1—C2 | 39.40 (18) | N1—C15—C14 | 121.1 (4) |
C5—Rh1—C2 | 64.8 (2) | N1—C15—C16 | 114.1 (4) |
C4—Rh1—C2 | 64.85 (19) | C14—C15—C16 | 124.8 (4) |
N1—Rh1—C3 | 137.37 (19) | N2—C16—C17 | 121.4 (4) |
N2—Rh1—C3 | 145.58 (19) | N2—C16—C15 | 115.7 (4) |
C1—Rh1—C3 | 64.55 (19) | C17—C16—C15 | 122.9 (4) |
C5—Rh1—C3 | 64.4 (2) | C18—C17—C16 | 120.2 (5) |
C4—Rh1—C3 | 38.47 (19) | C18—C17—H17 | 119.9 |
C2—Rh1—C3 | 38.22 (18) | C16—C17—H17 | 119.9 |
N1—Rh1—Cl1 | 85.96 (12) | C19—C18—C17 | 117.9 (5) |
N2—Rh1—Cl1 | 86.12 (11) | C19—C18—C23 | 119.3 (5) |
C1—Rh1—Cl1 | 152.25 (15) | C17—C18—C23 | 122.8 (5) |
C5—Rh1—Cl1 | 145.98 (16) | C18—C19—C20 | 119.6 (5) |
C4—Rh1—Cl1 | 107.57 (17) | C18—C19—H19 | 120.2 |
C2—Rh1—Cl1 | 112.86 (15) | C20—C19—H19 | 120.2 |
C3—Rh1—Cl1 | 92.53 (15) | N2—C20—C19 | 122.7 (5) |
C5—C1—C2 | 108.4 (5) | N2—C20—H20 | 118.7 |
C5—C1—C6 | 126.2 (5) | C19—C20—H20 | 118.7 |
C2—C1—C6 | 125.3 (5) | O1—C21—O2 | 126.0 (5) |
C5—C1—Rh1 | 71.4 (3) | O1—C21—C13 | 123.3 (5) |
C2—C1—Rh1 | 70.9 (3) | O2—C21—C13 | 110.6 (4) |
C6—C1—Rh1 | 126.4 (4) | C21—O2—C22 | 115.1 (4) |
C3—C2—C1 | 107.1 (5) | O2—C22—H22A | 109.5 |
C3—C2—C7 | 125.0 (5) | O2—C22—H22B | 109.5 |
C1—C2—C7 | 127.7 (5) | H22A—C22—H22B | 109.5 |
C3—C2—Rh1 | 71.7 (3) | O2—C22—H22C | 109.5 |
C1—C2—Rh1 | 69.7 (3) | H22A—C22—H22C | 109.5 |
C7—C2—Rh1 | 128.1 (4) | H22B—C22—H22C | 109.5 |
C2—C3—C4 | 108.5 (5) | O3—C23—O4 | 125.8 (5) |
C2—C3—C8 | 125.3 (5) | O3—C23—C18 | 124.5 (5) |
C4—C3—C8 | 126.1 (5) | O4—C23—C18 | 109.6 (4) |
C2—C3—Rh1 | 70.1 (3) | C23—O4—C24 | 117.1 (4) |
C4—C3—Rh1 | 69.8 (3) | O4—C24—H24A | 109.5 |
C8—C3—Rh1 | 125.6 (4) | O4—C24—H24B | 109.5 |
C3—C4—C5 | 107.3 (5) | H24A—C24—H24B | 109.5 |
C3—C4—C9 | 125.5 (5) | O4—C24—H24C | 109.5 |
C5—C4—C9 | 126.7 (5) | H24A—C24—H24C | 109.5 |
C3—C4—Rh1 | 71.7 (3) | H24B—C24—H24C | 109.5 |
C5—C4—Rh1 | 70.4 (3) | C29—N3S—C32 | 116.1 (5) |
C9—C4—Rh1 | 129.3 (4) | C29—N3S—O2S | 121.8 (5) |
C1—C5—C4 | 108.6 (5) | C32—N3S—O2S | 122.0 (5) |
C1—C5—C10 | 125.1 (5) | O1S—C29—N3S | 126.1 (6) |
C4—C5—C10 | 126.2 (5) | O1S—C29—C30 | 128.1 (6) |
C1—C5—Rh1 | 70.7 (3) | N3S—C29—C30 | 105.8 (5) |
C4—C5—Rh1 | 70.7 (3) | C29—C30—C31 | 105.2 (5) |
C10—C5—Rh1 | 126.4 (4) | C29—C30—H30A | 110.7 |
C1—C6—H6A | 109.5 | C31—C30—H30A | 110.7 |
C1—C6—H6B | 109.5 | C29—C30—H30B | 110.7 |
H6A—C6—H6B | 109.5 | C31—C30—H30B | 110.7 |
C1—C6—H6C | 109.5 | H30A—C30—H30B | 108.8 |
H6A—C6—H6C | 109.5 | C32—C31—C30 | 106.2 (5) |
H6B—C6—H6C | 109.5 | C32—C31—H31A | 110.5 |
C2—C7—H7A | 109.5 | C30—C31—H31A | 110.5 |
C2—C7—H7B | 109.5 | C32—C31—H31B | 110.5 |
H7A—C7—H7B | 109.5 | C30—C31—H31B | 110.5 |
C2—C7—H7C | 109.5 | H31A—C31—H31B | 108.7 |
H7A—C7—H7C | 109.5 | O3S—C32—N3S | 123.7 (6) |
H7B—C7—H7C | 109.5 | O3S—C32—C31 | 129.8 (6) |
C3—C8—H8A | 109.5 | N3S—C32—C31 | 106.4 (5) |
C3—C8—H8B | 109.5 | N3S—O2S—H2S | 102 (4) |
H8A—C8—H8B | 109.5 | N4S—O6S—H6S | 100 (3) |
C3—C8—H8C | 109.5 | C28—N4S—C25 | 117.0 (5) |
H8A—C8—H8C | 109.5 | C28—N4S—O6S | 121.1 (5) |
H8B—C8—H8C | 109.5 | C25—N4S—O6S | 121.7 (5) |
C4—C9—H9A | 109.5 | O5S—C28—N4S | 125.5 (5) |
C4—C9—H9B | 109.5 | O5S—C28—C27 | 128.9 (6) |
H9A—C9—H9B | 109.5 | N4S—C28—C27 | 105.5 (5) |
C4—C9—H9C | 109.5 | O4S—C25—N4S | 124.7 (6) |
H9A—C9—H9C | 109.5 | O4S—C25—C26 | 129.9 (6) |
H9B—C9—H9C | 109.5 | N4S—C25—C26 | 105.3 (5) |
C5—C10—H10A | 109.5 | C28—C27—C26 | 106.1 (5) |
C5—C10—H10B | 109.5 | C28—C27—H27A | 110.5 |
H10A—C10—H10B | 109.5 | C26—C27—H27A | 110.5 |
C5—C10—H10C | 109.5 | C28—C27—H27B | 110.5 |
H10A—C10—H10C | 109.5 | C26—C27—H27B | 110.5 |
H10B—C10—H10C | 109.5 | H27A—C27—H27B | 108.7 |
C11—N1—C15 | 118.2 (4) | C25—C26—C27 | 105.4 (5) |
C11—N1—Rh1 | 125.1 (3) | C25—C26—H26A | 110.7 |
C15—N1—Rh1 | 116.5 (3) | C27—C26—H26A | 110.7 |
C20—N2—C16 | 118.3 (4) | C25—C26—H26B | 110.7 |
C20—N2—Rh1 | 125.4 (3) | C27—C26—H26B | 110.7 |
C16—N2—Rh1 | 116.1 (3) | H26A—C26—H26B | 108.8 |
N1—C15—C16—C17 | 179.0 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
C30—H30A···O5S | 0.99 | 2.65 | 3.209 (7) | 116 |
C10—H10C···O6S | 0.98 | 2.56 | 3.195 (7) | 123 |
C6—H6A···O4S | 0.98 | 2.60 | 3.274 (7) | 126 |
C22—H22C···O4i | 0.98 | 2.52 | 3.497 (6) | 172 |
O6S—H6S···Cl2 | 0.86 (2) | 2.11 (2) | 2.967 (5) | 176 (5) |
O2S—H2S···Cl2 | 0.85 (2) | 2.20 (3) | 3.016 (5) | 162 (7) |
C22—H22C···Cl1ii | 0.98 | 3.16 | 3.650 (6) | 113 |
C20—H20···Cl2iii | 0.95 | 2.80 | 3.504 (5) | 131 |
Symmetry codes: (i) −x+3, −y, −z+2; (ii) x+1, y, z; (iii) x, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Rh(C10H15)Cl(C14H12N2O4)]Cl·2C4H5NO3 |
Mr | 811.47 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 200 |
a, b, c (Å) | 8.6511 (7), 33.613 (3), 11.9147 (9) |
β (°) | 92.723 (2) |
V (Å3) | 3460.8 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.71 |
Crystal size (mm) | 0.19 × 0.15 × 0.09 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2000) |
Tmin, Tmax | 0.77, 1.00 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 20576, 6273, 3649 |
Rint | 0.096 |
(sin θ/λ)max (Å−1) | 0.600 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.089, 0.85 |
No. of reflections | 6273 |
No. of parameters | 457 |
No. of restraints | 4 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.71, −0.60 |
Computer programs: SMART (Bruker, 2000), SAINT (Bruker, 2000), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C30—H30A···O5S | 0.99 | 2.65 | 3.209 (7) | 115.6 |
C10—H10C···O6S | 0.98 | 2.56 | 3.195 (7) | 122.7 |
C6—H6A···O4S | 0.98 | 2.60 | 3.274 (7) | 125.9 |
C22—H22C···O4i | 0.98 | 2.52 | 3.497 (6) | 171.9 |
O6S—H6S···Cl2 | 0.859 (16) | 2.109 (18) | 2.967 (5) | 176 (5) |
O2S—H2S···Cl2 | 0.851 (16) | 2.20 (3) | 3.016 (5) | 162 (7) |
C22—H22C···Cl1ii | 0.98 | 3.16 | 3.650 (6) | 112.6 |
C20—H20···Cl2iii | 0.95 | 2.80 | 3.504 (5) | 131.3 |
Symmetry codes: (i) −x+3, −y, −z+2; (ii) x+1, y, z; (iii) x, −y+1/2, z+1/2. |
The regioselective reduction of nicotinamide adenine dinucleotide (NAD+) to NADH, catalyzed by highly water-soluble rhodium complexes, has been studied extensively (Ruppert et al., 1988; Steckhan et al., 1991). Using rhodium complexes, regeneration of NADH was achieved by electrochemical, chemical and indirect electrochemical methods (Chenault et al., 1987; Adlercreutz, 1996). The key redox chemicals were [Cp*(bpy)RhIII(H2O)]2+ and [Cp*(bpy)RhIIIH]+ species, where Cp* and bpy are pentamethylcyclopentadienyl and 2,2'-bipyridine, respectively. Currently, the complexes [Cp*RhIII(bpy)(H2O)](PF6)2 and [Cp*RhIII(6,6'-Me2bpy)(H2O)](CF3SO3)2, where 6,6'-Me2bpy is 6,6'-dimethyl-2,2'-bipyridine, were characterized fully by X-ray crystallography (Ogo et al., 2005). These water-bound RhIII complexes originate from the corresponding chloride-coordinated rhodium species, where the chloride ions can easily dissociate from the metal centre to form complexes with Lewis bases such as H2O. Interestingly, although a chloride-coordinated rhodium complex with arylazoimidazole and Cp* has been reported (Govindaswamy et al., 2007), reports of chloride-coordinated rhodium complexes with Cp* and bipyridine ligands are rare.
The regeneration of NADH using RhIII complexes has often been utilized in the biotransformation of organic substrates by various enzymes. Recently, it was also reported that spatial separation between enzymes and Rh metal complex mediators should be implemented to ensure long-term stability of the electro-enzymatic transformation (Hildebrand & Lütz, 2009). Unfortunately, not much effort was made to covalently immobilize the mediators to generate reagent-free bioelectrocatalytic devices, partially because of the absence of available precursor mediators with linker units and relevant chemistry (Poizat et al., 2010).
1-Hydroxypyrrolidine-2,5-dione (NHS) is commonly used to activate the acid group in organic chemistry (Cheng et al., 2007; Jones et al., 2003). Once the NHS-tethered rhodium(III) complexes are available and the concept of linking rhodium(III) catalysts on the electrode using the NHS-tethered rhodium precursor is proved, biotransformation of organic substrates utilizing the regeneration of NADH by RhIII complexes may be widely used.
We report here the crystal structure of [RhIIICp*Cl(bpyCOOMe)]Cl.2NHS, (I) (see Scheme), where bpyCOOMe is dimethyl 2,2'-bipyridine-4,4'-dicarboxylate, showing the various intermolecular hydrogen-bonding interactions between the NHS solvent molecules, then Cl- counter-anions and the bpyCOOMe ligands in the crystal lattice. (I) was synthesized by treating two equivalents of NaOMe with [bis(2,5-dioxopyrrolidin-1-yl) 2,2'-bipyridine-4,4'-dicarboxylate]chlorido(η5-pentamethylcyclopentadienyl)rhodium(III) chloride, (II) (see Scheme).
Complex (I) contains NHS solvent molecules and [RhIIICp*Cl(bpyCOOMe)]Cl (Fig. 1). The RhIII atom is coordinated by Cp*, bpyCOOMe and Cl ligands, with another Cl- anion present in the lattice to balance the charge. The Rh—C(Cp*) bond lengths of the nearly flat Cp* ligand are in the range 2.136 (5)–2.175 (5) Å. The Rh—Cl distance in (I) is 2.3823 (14) Å and this relatively long distance indicates that the Cl atom can easily dissociate from the metal ion. The dihedral angle between the plande of the pyridine rings in the bpyCOOMe ligand is 179.0 (4)°, which shows the near planarity of the bipyridine system. The Rh—N distances are shorter than in a previously reported complex, which indicates that the acidity of the rhodium centre of (I) is greater than that in the reported complex (Ogo et al., 2005). The N—Rh—N angle involving the bipyridine N atoms is 76.9 (15)°, which is comparable to previously reported values of 77.1 (2) and 75.6 (1)° (Ogo et al., 2005).
The hydrogen-bonding interactions between the methyl groups of the Cp* ligand and the carbonyl (C═O) and hydroxy (OH) groups of the NHS solvent molecules are depicted in Fig. 2. The NHS donor atoms are O4S and O6S and the Cp*–carbonyl and Cp*–hydroxy C—H···O hydrogen-bond distances (Table 1 and Fig. 2) indicate a weak interaction.
The NHS solvent molecules present in the crystal lattice form O—H···Cl interactions with the Cl- counter-anion. Considering that the reported distance of the van der Waals radii for H and neutral Cl atoms is 2.95 Å (Aullon et al., 1998), the hydrogen-bonding interaction is very strong. The two methylene groups of NHS are also engaged in weak C—H···O interactions with carbonyl atoms O5S and O1S, forming R22(8) and R22(9) rings. The hydrogen-bonding interactions between the NHS solvent molecules the Cl- counter-anion form a chain along the c axis due to c-glide symmetry (Fig. 3). Previously, NHS and its derivatives were reported to form weak hydrogen-bond interactions, e.g. O—H···O, N—H···O and C—H···O (Stefanowicz et al., 2007).
The weak C20—H20···Cl2i and C22—H22C···Cl1ii hydrogen bonds (Table 2) between the bpyCOOMe ligand and the Cl- counter-anion connect the components into a supramolecular three-dimensional network along the b axis. Of these two interactions, that involcing the aromatic ring (C20—H20···Cl2i) is an intermediate contact (Balamurugan et al., 2004; Rinta et al., 2012) and the other is a weak C—H···Cl contact. Additionally, intermolecular C—H···π interactions of bpyCOOMe with a methyl group of Cp* and with a pyridine C—H group stabilize the crystal packing in (I). The hydrogen bonding between the Cp* ligands, NHS solvent molecules and Cl- counter-anions forms the links in a V-shaped chain of Rh complexes along the c axis. The two sides of the chain are constructed by [RhIIICp*Cl(bpyCOOMe)]+; the solvent molecules and counter-anions extend the chain along the c axis through C—H···O, O—H···Cl and C—H···O(carbonyl) hydrogen bonds (Fig. 4).
To ensure the long-term stability of the electro-enzymatic transformation and reagent-free bioelectrocatalytic devices in the regeneration of NADH, RhIII complexes or mediators should be separated from the enzymes. The isolation of (I) from the [bis(2,5-dioxopyrrolidin-1-yl) 2,2'-bipyridine-4,4'-dicarboxylate]rhodium(III) precursor by treatment with NaOCH3, indicates that a similar synthetic route can be utilized to link the Rh catalyst on the surface of electrodes with NaO(CH2)nR units (Walcarius et al., 2011).