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Dibothrioclinin I and II, namely (+)-(11R,12S,25R,27S)- and (±)-(11RS,12RS,25RS,27SR)-3,3,7,17,21-pentamethyl-4,12,18,26-tetraoxaheptacyclo[15.11.1.02,15.05,14.06,11.019,28.020,25]nonacosa-5(14),6,8,10,19(28),20,22,24-octaene-13,27-dione, respectively, are C30H28O6 epimers which are derived from two bothrioclinin moieties joined so as to create an additional six-membered ring. Structurally, the epimers differ only by inversion at one C atom of a central ring junction and the corresponding six-membered rings have similar conformations in each molecule, except for one ring adjacent to this inversion site.
Supporting information
CCDC references: 224670; 224671
The roots and rhizomes of Gerbera piloselloides (L.) Cass were collected from DALI, Yunnan Province, China. The air-dried roots and rhizomes (1 kg) were ground to a fine powder and extracted with ethanol, and the ethanol extract was partitioned between an aqueous solution and petroleum ether. The petroleum ether fraction was chromatographed repeatedly on silica gel, eluted with petroleum ether-acetylacetate (9:1), and gave colourless crystals. Purification of the crystals on a preparative high-performance liquid chromatography column afforded compounds (I) (18 mg) and (II) (30 mg). Compound (I) was dissolved in methanol and chloroform (1:1) and stored at room temperature, and transparent block-shaped crystals were obtained after 4 d. Compound (II) was dissolved in chloroform and stored at room temperature, and transparent plate-like crystals were obtained after 7 d.
Due to the absence of any significant anomalous scatterers in (I), attempts to confirm the absolute structure by refinement of the Flack parameter (Flack, 1983) led to an inconclusive value (Flack & Bernardinelli, 2000) for this parameter. Therefore, the enantiomer used in the model was chosen arbitrarily and the Friedel pairs were merged before the final refinement. For both compounds, the methyl H atoms were constrained to an ideal geometry, with Uiso(H) = 1.5Ueq(C), but were allowed to rotate freely about the C—C bonds. All other H atoms were placed in geometrically idealized positions and constrained to ride on their parent atoms, with Uiso(H) = 1.2Ueq(C).
For both compounds, data collection: DENZO (Otwinowski & Minor, 1997); cell refinement: SCALE (Otwinowski & Minor, 1997); data reduction: SCALE; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPII (Johnson, 1976) and PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97 and PLATON.
(I) (+)-(11
R,12S,25
R,27S)-3,3,7,17,21-pentamethyl-4,12,18,26- tetraoxaheptacyclo[15.11.1.0
2,15.0
5,14.0
6,11.0
19,28.0
20,25] nonacosa-5(14),6,8,10,19 (28),20,22,24-octaene-13,27-dione
top
Crystal data top
C30H28O6 | F(000) = 512 |
Mr = 484.52 | Dx = 1.321 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2yb | Cell parameters from 5888 reflections |
a = 11.001 (2) Å | θ = 2.4–27.3° |
b = 8.307 (2) Å | µ = 0.09 mm−1 |
c = 13.332 (3) Å | T = 296 K |
β = 90.39 (3)° | Block, colourless |
V = 1218.3 (4) Å3 | 0.4 × 0.2 × 0.1 mm |
Z = 2 | |
Data collection top
MAC DIP 2030K area-detector diffractometer | 2715 reflections with I > 2σ(I) |
Radiation source: rotating anode | Rint = 0.024 |
Graphite monochromator | θmax = 27.3°, θmin = 2.4° |
ω scans | h = 0→14 |
5888 measured reflections | k = 0→10 |
2725 independent reflections | l = −17→17 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.054 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.138 | H-atom parameters constrained |
S = 1.23 | w = 1/[σ2(Fo2) + (0.0589P)2 + 0.4086P] where P = (Fo2 + 2Fc2)/3 |
2725 reflections | (Δ/σ)max = 0.014 |
325 parameters | Δρmax = 0.17 e Å−3 |
1 restraint | Δρmin = −0.26 e Å−3 |
Crystal data top
C30H28O6 | V = 1218.3 (4) Å3 |
Mr = 484.52 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 11.001 (2) Å | µ = 0.09 mm−1 |
b = 8.307 (2) Å | T = 296 K |
c = 13.332 (3) Å | 0.4 × 0.2 × 0.1 mm |
β = 90.39 (3)° | |
Data collection top
MAC DIP 2030K area-detector diffractometer | 2715 reflections with I > 2σ(I) |
5888 measured reflections | Rint = 0.024 |
2725 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.054 | 1 restraint |
wR(F2) = 0.138 | H-atom parameters constrained |
S = 1.23 | Δρmax = 0.17 e Å−3 |
2725 reflections | Δρmin = −0.26 e Å−3 |
325 parameters | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.7355 (3) | 0.2776 (4) | −0.14454 (18) | 0.0643 (8) | |
O2 | 0.8216 (3) | 0.1374 (4) | −0.0228 (2) | 0.0693 (8) | |
O3 | 0.6770 (2) | 0.6634 (3) | 0.04218 (18) | 0.0505 (6) | |
O4 | 0.6584 (2) | 0.2453 (4) | 0.45755 (18) | 0.0531 (6) | |
O5 | 0.6168 (2) | 0.4948 (4) | 0.4124 (2) | 0.0649 (8) | |
O6 | 0.9704 (2) | 0.2404 (3) | 0.29082 (16) | 0.0428 (5) | |
C1 | 0.7763 (4) | 0.2653 (5) | −0.0467 (2) | 0.0530 (9) | |
C2 | 0.7620 (3) | 0.4032 (4) | 0.0175 (2) | 0.0402 (7) | |
C3 | 0.6996 (3) | 0.5345 (5) | −0.0158 (2) | 0.0430 (7) | |
C4 | 0.6504 (3) | 0.5440 (5) | −0.1176 (2) | 0.0491 (8) | |
C5 | 0.5853 (3) | 0.6767 (6) | −0.1592 (3) | 0.0615 (11) | |
C6 | 0.5506 (4) | 0.6651 (8) | −0.2605 (3) | 0.0756 (15) | |
H6A | 0.5078 | 0.7500 | −0.2893 | 0.091* | |
C7 | 0.5773 (4) | 0.5335 (9) | −0.3187 (3) | 0.0811 (17) | |
H7A | 0.5533 | 0.5318 | −0.3857 | 0.097* | |
C8 | 0.6390 (4) | 0.4043 (8) | −0.2791 (3) | 0.0715 (13) | |
H8A | 0.6568 | 0.3148 | −0.3182 | 0.086* | |
C9 | 0.6741 (3) | 0.4114 (6) | −0.1787 (3) | 0.0569 (10) | |
C10 | 0.7515 (3) | 0.6904 (4) | 0.1339 (2) | 0.0434 (7) | |
C11 | 0.7614 (3) | 0.5278 (4) | 0.1887 (2) | 0.0366 (6) | |
H11A | 0.6776 | 0.4980 | 0.2052 | 0.044* | |
C12 | 0.8097 (3) | 0.3885 (4) | 0.1239 (2) | 0.0372 (6) | |
H12A | 0.7751 | 0.2893 | 0.1514 | 0.045* | |
C13 | 0.5560 (5) | 0.8283 (8) | −0.1029 (4) | 0.0867 (17) | |
H13A | 0.5109 | 0.8998 | −0.1458 | 0.130* | |
H13B | 0.6301 | 0.8795 | −0.0819 | 0.130* | |
H13C | 0.5083 | 0.8023 | −0.0451 | 0.130* | |
C14 | 0.8674 (4) | 0.7694 (5) | 0.0978 (3) | 0.0600 (10) | |
H14A | 0.8480 | 0.8691 | 0.0650 | 0.090* | |
H14B | 0.9077 | 0.6991 | 0.0515 | 0.090* | |
H14C | 0.9200 | 0.7900 | 0.1541 | 0.090* | |
C15 | 0.6741 (5) | 0.8099 (6) | 0.1928 (3) | 0.0711 (13) | |
H15A | 0.6698 | 0.9100 | 0.1570 | 0.107* | |
H15B | 0.7102 | 0.8275 | 0.2576 | 0.107* | |
H15C | 0.5937 | 0.7671 | 0.2008 | 0.107* | |
C16 | 0.6883 (3) | 0.3854 (5) | 0.4071 (2) | 0.0472 (8) | |
C17 | 0.7993 (3) | 0.3854 (4) | 0.3504 (2) | 0.0394 (6) | |
C18 | 0.8705 (3) | 0.2522 (4) | 0.3484 (2) | 0.0368 (6) | |
C19 | 0.8438 (3) | 0.1088 (4) | 0.4075 (2) | 0.0409 (7) | |
C20 | 0.9172 (3) | −0.0313 (4) | 0.4168 (2) | 0.0460 (7) | |
C21 | 0.8725 (4) | −0.1588 (5) | 0.4723 (3) | 0.0560 (9) | |
H21A | 0.9206 | −0.2500 | 0.4804 | 0.067* | |
C22 | 0.7584 (4) | −0.1556 (5) | 0.5163 (3) | 0.0619 (11) | |
H22A | 0.7297 | −0.2460 | 0.5498 | 0.074* | |
C23 | 0.6882 (4) | −0.0202 (6) | 0.5106 (3) | 0.0598 (10) | |
H23A | 0.6125 | −0.0163 | 0.5413 | 0.072* | |
C24 | 0.7323 (3) | 0.1118 (5) | 0.4580 (2) | 0.0473 (8) | |
C25 | 1.0080 (3) | 0.3801 (4) | 0.2292 (2) | 0.0405 (7) | |
C26 | 0.9692 (3) | 0.5335 (4) | 0.2813 (2) | 0.0424 (7) | |
H26A | 0.9952 | 0.6263 | 0.2428 | 0.051* | |
H26B | 1.0065 | 0.5396 | 0.3473 | 0.051* | |
C27 | 0.8302 (3) | 0.5333 (4) | 0.2907 (2) | 0.0398 (7) | |
H27A | 0.8047 | 0.6291 | 0.3280 | 0.048* | |
C28 | 1.0431 (4) | −0.0474 (5) | 0.3722 (3) | 0.0549 (9) | |
H28A | 1.0755 | −0.1518 | 0.3878 | 0.082* | |
H28B | 1.0953 | 0.0342 | 0.3998 | 0.082* | |
H28C | 1.0381 | −0.0348 | 0.3007 | 0.082* | |
C29 | 0.9487 (3) | 0.3673 (4) | 0.1257 (2) | 0.0406 (7) | |
H29A | 0.9680 | 0.2627 | 0.0976 | 0.049* | |
H29B | 0.9843 | 0.4482 | 0.0824 | 0.049* | |
C30 | 1.1448 (3) | 0.3621 (6) | 0.2214 (3) | 0.0552 (9) | |
H30A | 1.1808 | 0.3710 | 0.2869 | 0.083* | |
H30B | 1.1764 | 0.4453 | 0.1789 | 0.083* | |
H30C | 1.1638 | 0.2588 | 0.1933 | 0.083* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0834 (19) | 0.0721 (19) | 0.0375 (12) | −0.0012 (17) | −0.0058 (12) | −0.0085 (13) |
O2 | 0.102 (2) | 0.0495 (16) | 0.0560 (15) | 0.0131 (16) | −0.0114 (15) | −0.0132 (13) |
O3 | 0.0520 (13) | 0.0516 (15) | 0.0478 (12) | 0.0145 (12) | −0.0099 (10) | 0.0030 (11) |
O4 | 0.0447 (12) | 0.0690 (17) | 0.0458 (12) | −0.0008 (13) | 0.0114 (10) | 0.0099 (12) |
O5 | 0.0554 (15) | 0.074 (2) | 0.0653 (16) | 0.0142 (15) | 0.0178 (12) | −0.0005 (15) |
O6 | 0.0416 (11) | 0.0459 (13) | 0.0410 (11) | 0.0060 (10) | 0.0097 (9) | 0.0082 (10) |
C1 | 0.066 (2) | 0.057 (2) | 0.0369 (15) | 0.0011 (19) | −0.0031 (14) | −0.0067 (16) |
C2 | 0.0416 (14) | 0.0441 (17) | 0.0347 (14) | 0.0015 (14) | −0.0004 (11) | 0.0002 (13) |
C3 | 0.0380 (14) | 0.0526 (19) | 0.0385 (14) | −0.0010 (14) | 0.0024 (11) | 0.0016 (14) |
C4 | 0.0349 (14) | 0.072 (2) | 0.0401 (15) | −0.0041 (16) | −0.0005 (12) | 0.0096 (17) |
C5 | 0.0353 (15) | 0.095 (3) | 0.0542 (19) | 0.0025 (19) | −0.0031 (14) | 0.025 (2) |
C6 | 0.0463 (19) | 0.122 (4) | 0.058 (2) | −0.001 (2) | −0.0114 (17) | 0.034 (3) |
C7 | 0.054 (2) | 0.147 (5) | 0.0418 (18) | −0.019 (3) | −0.0100 (16) | 0.020 (3) |
C8 | 0.064 (2) | 0.112 (4) | 0.0389 (17) | −0.019 (3) | −0.0048 (16) | 0.000 (2) |
C9 | 0.0471 (18) | 0.083 (3) | 0.0407 (16) | −0.011 (2) | −0.0017 (13) | 0.0060 (18) |
C10 | 0.0494 (17) | 0.0422 (17) | 0.0387 (15) | 0.0101 (14) | 0.0012 (12) | 0.0009 (13) |
C11 | 0.0341 (12) | 0.0411 (16) | 0.0345 (13) | 0.0047 (12) | 0.0023 (10) | 0.0012 (12) |
C12 | 0.0389 (14) | 0.0399 (15) | 0.0329 (13) | 0.0027 (13) | 0.0031 (10) | −0.0017 (12) |
C13 | 0.074 (3) | 0.107 (4) | 0.078 (3) | 0.043 (3) | −0.007 (2) | 0.024 (3) |
C14 | 0.061 (2) | 0.047 (2) | 0.072 (2) | −0.0025 (18) | −0.0037 (18) | 0.0141 (19) |
C15 | 0.091 (3) | 0.058 (3) | 0.064 (2) | 0.039 (2) | 0.001 (2) | −0.0062 (19) |
C16 | 0.0432 (16) | 0.063 (2) | 0.0356 (14) | −0.0014 (17) | 0.0065 (12) | −0.0004 (16) |
C17 | 0.0421 (15) | 0.0465 (17) | 0.0295 (12) | 0.0019 (15) | 0.0035 (11) | −0.0021 (13) |
C18 | 0.0370 (13) | 0.0433 (16) | 0.0302 (12) | −0.0047 (13) | 0.0016 (10) | 0.0033 (12) |
C19 | 0.0466 (16) | 0.0460 (18) | 0.0301 (13) | −0.0047 (14) | −0.0012 (11) | 0.0021 (12) |
C20 | 0.0574 (18) | 0.0438 (18) | 0.0368 (15) | −0.0058 (16) | −0.0084 (13) | −0.0015 (14) |
C21 | 0.074 (2) | 0.049 (2) | 0.0451 (18) | −0.0082 (19) | −0.0086 (16) | 0.0045 (16) |
C22 | 0.079 (3) | 0.058 (2) | 0.0483 (19) | −0.022 (2) | −0.0058 (18) | 0.0136 (17) |
C23 | 0.056 (2) | 0.079 (3) | 0.0441 (17) | −0.021 (2) | 0.0030 (15) | 0.0102 (19) |
C24 | 0.0467 (16) | 0.060 (2) | 0.0353 (14) | −0.0066 (16) | −0.0005 (13) | 0.0051 (15) |
C25 | 0.0366 (14) | 0.0464 (17) | 0.0385 (14) | 0.0014 (14) | 0.0042 (11) | 0.0071 (14) |
C26 | 0.0417 (15) | 0.0445 (17) | 0.0411 (15) | −0.0029 (14) | −0.0009 (12) | 0.0035 (14) |
C27 | 0.0420 (15) | 0.0423 (17) | 0.0349 (14) | 0.0025 (14) | 0.0000 (11) | −0.0024 (13) |
C28 | 0.061 (2) | 0.046 (2) | 0.057 (2) | 0.0079 (17) | 0.0001 (16) | 0.0012 (16) |
C29 | 0.0397 (14) | 0.0477 (18) | 0.0344 (13) | 0.0071 (14) | 0.0071 (11) | 0.0041 (13) |
C30 | 0.0347 (15) | 0.074 (3) | 0.0568 (19) | 0.0051 (17) | 0.0041 (13) | 0.0174 (19) |
Geometric parameters (Å, º) top
O1—C9 | 1.376 (6) | C14—H14A | 0.9600 |
O1—C1 | 1.380 (4) | C14—H14B | 0.9600 |
O2—C1 | 1.215 (5) | C14—H14C | 0.9600 |
O3—C3 | 1.344 (4) | C15—H15A | 0.9600 |
O3—C10 | 1.484 (4) | C15—H15B | 0.9600 |
O4—C24 | 1.375 (5) | C15—H15C | 0.9600 |
O4—C16 | 1.385 (5) | C16—C17 | 1.440 (4) |
O5—C16 | 1.205 (5) | C17—C18 | 1.356 (5) |
O6—C18 | 1.348 (3) | C17—C27 | 1.505 (5) |
O6—C25 | 1.482 (4) | C18—C19 | 1.460 (4) |
C1—C2 | 1.440 (5) | C19—C24 | 1.403 (5) |
C2—C3 | 1.362 (5) | C19—C20 | 1.421 (5) |
C2—C12 | 1.514 (4) | C20—C21 | 1.384 (5) |
C3—C4 | 1.461 (4) | C20—C28 | 1.517 (5) |
C4—C9 | 1.395 (6) | C21—C22 | 1.389 (6) |
C4—C5 | 1.425 (6) | C21—H21A | 0.9300 |
C5—C6 | 1.404 (6) | C22—C23 | 1.367 (7) |
C5—C13 | 1.502 (8) | C22—H22A | 0.9300 |
C6—C7 | 1.374 (8) | C23—C24 | 1.391 (5) |
C6—H6A | 0.9300 | C23—H23A | 0.9300 |
C7—C8 | 1.373 (8) | C25—C26 | 1.514 (5) |
C7—H7A | 0.9300 | C25—C30 | 1.517 (4) |
C8—C9 | 1.392 (5) | C25—C29 | 1.526 (4) |
C8—H8A | 0.9300 | C26—C27 | 1.535 (4) |
C10—C14 | 1.516 (5) | C26—H26A | 0.9700 |
C10—C15 | 1.529 (5) | C26—H26B | 0.9700 |
C10—C11 | 1.539 (4) | C27—H27A | 0.9800 |
C11—C12 | 1.540 (4) | C28—H28A | 0.9600 |
C11—C27 | 1.552 (4) | C28—H28B | 0.9600 |
C11—H11A | 0.9800 | C28—H28C | 0.9600 |
C12—C29 | 1.539 (4) | C29—H29A | 0.9700 |
C12—H12A | 0.9800 | C29—H29B | 0.9700 |
C13—H13A | 0.9600 | C30—H30A | 0.9600 |
C13—H13B | 0.9600 | C30—H30B | 0.9600 |
C13—H13C | 0.9600 | C30—H30C | 0.9600 |
| | | |
C9—O1—C1 | 121.9 (3) | H15A—C15—H15C | 109.5 |
C3—O3—C10 | 119.3 (2) | H15B—C15—H15C | 109.5 |
C24—O4—C16 | 122.5 (2) | O5—C16—O4 | 116.6 (3) |
C18—O6—C25 | 119.3 (2) | O5—C16—C17 | 126.0 (4) |
O2—C1—O1 | 116.3 (3) | O4—C16—C17 | 117.4 (3) |
O2—C1—C2 | 125.9 (3) | C18—C17—C16 | 120.2 (3) |
O1—C1—C2 | 117.8 (3) | C18—C17—C27 | 121.5 (2) |
C3—C2—C1 | 120.1 (3) | C16—C17—C27 | 118.2 (3) |
C3—C2—C12 | 122.7 (3) | O6—C18—C17 | 123.0 (3) |
C1—C2—C12 | 117.0 (3) | O6—C18—C19 | 114.6 (3) |
O3—C3—C2 | 123.1 (3) | C17—C18—C19 | 122.5 (3) |
O3—C3—C4 | 115.0 (3) | C24—C19—C20 | 118.1 (3) |
C2—C3—C4 | 121.9 (3) | C24—C19—C18 | 115.1 (3) |
C9—C4—C5 | 118.6 (3) | C20—C19—C18 | 126.8 (3) |
C9—C4—C3 | 115.5 (3) | C21—C20—C19 | 118.0 (3) |
C5—C4—C3 | 125.8 (4) | C21—C20—C28 | 118.1 (3) |
C6—C5—C4 | 117.0 (5) | C19—C20—C28 | 123.9 (3) |
C6—C5—C13 | 118.7 (4) | C20—C21—C22 | 122.5 (4) |
C4—C5—C13 | 124.3 (3) | C20—C21—H21A | 118.8 |
C7—C6—C5 | 122.7 (5) | C22—C21—H21A | 118.8 |
C7—C6—H6A | 118.7 | C23—C22—C21 | 120.3 (4) |
C5—C6—H6A | 118.7 | C23—C22—H22A | 119.9 |
C8—C7—C6 | 120.8 (4) | C21—C22—H22A | 119.9 |
C8—C7—H7A | 119.6 | C22—C23—C24 | 118.5 (3) |
C6—C7—H7A | 119.6 | C22—C23—H23A | 120.7 |
C7—C8—C9 | 118.0 (5) | C24—C23—H23A | 120.7 |
C7—C8—H8A | 121.0 | O4—C24—C23 | 115.4 (3) |
C9—C8—H8A | 121.0 | O4—C24—C19 | 122.1 (3) |
O1—C9—C8 | 114.6 (4) | C23—C24—C19 | 122.5 (4) |
O1—C9—C4 | 122.5 (3) | O6—C25—C26 | 108.9 (2) |
C8—C9—C4 | 122.9 (4) | O6—C25—C30 | 104.0 (3) |
O3—C10—C14 | 105.4 (3) | C26—C25—C30 | 113.4 (3) |
O3—C10—C15 | 102.4 (3) | O6—C25—C29 | 109.1 (3) |
C14—C10—C15 | 110.8 (4) | C26—C25—C29 | 110.7 (3) |
O3—C10—C11 | 107.2 (3) | C30—C25—C29 | 110.5 (3) |
C14—C10—C11 | 118.3 (3) | C25—C26—C27 | 108.7 (3) |
C15—C10—C11 | 111.3 (3) | C25—C26—H26A | 110.0 |
C10—C11—C12 | 114.6 (2) | C27—C26—H26A | 110.0 |
C10—C11—C27 | 115.0 (3) | C25—C26—H26B | 110.0 |
C12—C11—C27 | 110.2 (2) | C27—C26—H26B | 110.0 |
C10—C11—H11A | 105.3 | H26A—C26—H26B | 108.3 |
C12—C11—H11A | 105.3 | C17—C27—C26 | 105.8 (3) |
C27—C11—H11A | 105.3 | C17—C27—C11 | 109.2 (3) |
C2—C12—C29 | 111.2 (2) | C26—C27—C11 | 114.1 (2) |
C2—C12—C11 | 110.3 (3) | C17—C27—H27A | 109.2 |
C29—C12—C11 | 115.1 (3) | C26—C27—H27A | 109.2 |
C2—C12—H12A | 106.6 | C11—C27—H27A | 109.2 |
C29—C12—H12A | 106.6 | C20—C28—H28A | 109.5 |
C11—C12—H12A | 106.6 | C20—C28—H28B | 109.5 |
C5—C13—H13A | 109.5 | H28A—C28—H28B | 109.5 |
C5—C13—H13B | 109.5 | C20—C28—H28C | 109.5 |
H13A—C13—H13B | 109.5 | H28A—C28—H28C | 109.5 |
C5—C13—H13C | 109.5 | H28B—C28—H28C | 109.5 |
H13A—C13—H13C | 109.5 | C25—C29—C12 | 115.1 (2) |
H13B—C13—H13C | 109.5 | C25—C29—H29A | 108.5 |
C10—C14—H14A | 109.5 | C12—C29—H29A | 108.5 |
C10—C14—H14B | 109.5 | C25—C29—H29B | 108.5 |
H14A—C14—H14B | 109.5 | C12—C29—H29B | 108.5 |
C10—C14—H14C | 109.5 | H29A—C29—H29B | 107.5 |
H14A—C14—H14C | 109.5 | C25—C30—H30A | 109.5 |
H14B—C14—H14C | 109.5 | C25—C30—H30B | 109.5 |
C10—C15—H15A | 109.5 | H30A—C30—H30B | 109.5 |
C10—C15—H15B | 109.5 | C25—C30—H30C | 109.5 |
H15A—C15—H15B | 109.5 | H30A—C30—H30C | 109.5 |
C10—C15—H15C | 109.5 | H30B—C30—H30C | 109.5 |
| | | |
C9—O1—C1—O2 | 174.9 (4) | O5—C16—C17—C18 | −178.1 (3) |
C9—O1—C1—C2 | −5.1 (5) | O4—C16—C17—C18 | −0.5 (4) |
O2—C1—C2—C3 | −173.9 (4) | O5—C16—C17—C27 | −0.7 (5) |
O1—C1—C2—C3 | 6.1 (5) | O4—C16—C17—C27 | 176.9 (3) |
O2—C1—C2—C12 | 1.2 (6) | C25—O6—C18—C17 | 2.3 (4) |
O1—C1—C2—C12 | −178.8 (3) | C25—O6—C18—C19 | −178.6 (3) |
C10—O3—C3—C2 | 19.3 (5) | C16—C17—C18—O6 | 174.8 (3) |
C10—O3—C3—C4 | −161.6 (3) | C27—C17—C18—O6 | −2.5 (5) |
C1—C2—C3—O3 | 176.1 (3) | C16—C17—C18—C19 | −4.2 (4) |
C12—C2—C3—O3 | 1.3 (5) | C27—C17—C18—C19 | 178.5 (3) |
C1—C2—C3—C4 | −2.9 (5) | O6—C18—C19—C24 | −172.4 (3) |
C12—C2—C3—C4 | −177.7 (3) | C17—C18—C19—C24 | 6.7 (4) |
O3—C3—C4—C9 | 179.6 (3) | O6—C18—C19—C20 | 6.2 (4) |
C2—C3—C4—C9 | −1.4 (5) | C17—C18—C19—C20 | −174.7 (3) |
O3—C3—C4—C5 | 1.6 (5) | C24—C19—C20—C21 | 2.2 (4) |
C2—C3—C4—C5 | −179.3 (3) | C18—C19—C20—C21 | −176.4 (3) |
C9—C4—C5—C6 | −0.9 (5) | C24—C19—C20—C28 | −175.9 (3) |
C3—C4—C5—C6 | 177.0 (3) | C18—C19—C20—C28 | 5.5 (5) |
C9—C4—C5—C13 | −178.6 (4) | C19—C20—C21—C22 | 1.7 (5) |
C3—C4—C5—C13 | −0.7 (6) | C28—C20—C21—C22 | 179.9 (3) |
C4—C5—C6—C7 | −0.2 (6) | C20—C21—C22—C23 | −3.6 (6) |
C13—C5—C6—C7 | 177.7 (4) | C21—C22—C23—C24 | 1.5 (6) |
C5—C6—C7—C8 | 0.8 (7) | C16—O4—C24—C23 | −178.9 (3) |
C6—C7—C8—C9 | −0.4 (6) | C16—O4—C24—C19 | 0.3 (5) |
C1—O1—C9—C8 | −179.9 (3) | C22—C23—C24—O4 | −178.3 (3) |
C1—O1—C9—C4 | 0.8 (5) | C22—C23—C24—C19 | 2.4 (5) |
C7—C8—C9—O1 | −180.0 (4) | C20—C19—C24—O4 | 176.5 (3) |
C7—C8—C9—C4 | −0.7 (6) | C18—C19—C24—O4 | −4.7 (4) |
C5—C4—C9—O1 | −179.4 (3) | C20—C19—C24—C23 | −4.3 (5) |
C3—C4—C9—O1 | 2.5 (5) | C18—C19—C24—C23 | 174.4 (3) |
C5—C4—C9—C8 | 1.3 (5) | C18—O6—C25—C26 | 29.9 (3) |
C3—C4—C9—C8 | −176.8 (3) | C18—O6—C25—C30 | 151.1 (3) |
C3—O3—C10—C14 | 81.3 (4) | C18—O6—C25—C29 | −91.0 (3) |
C3—O3—C10—C15 | −162.8 (3) | O6—C25—C26—C27 | −61.2 (3) |
C3—O3—C10—C11 | −45.5 (4) | C30—C25—C26—C27 | −176.4 (3) |
O3—C10—C11—C12 | 54.3 (3) | C29—C25—C26—C27 | 58.8 (3) |
C14—C10—C11—C12 | −64.6 (4) | C18—C17—C27—C26 | −28.6 (4) |
C15—C10—C11—C12 | 165.5 (3) | C16—C17—C27—C26 | 154.0 (3) |
O3—C10—C11—C27 | −176.5 (2) | C18—C17—C27—C11 | 94.6 (3) |
C14—C10—C11—C27 | 64.6 (4) | C16—C17—C27—C11 | −82.7 (3) |
C15—C10—C11—C27 | −65.3 (4) | C25—C26—C27—C17 | 59.2 (3) |
C3—C2—C12—C29 | −120.7 (3) | C25—C26—C27—C11 | −60.9 (4) |
C1—C2—C12—C29 | 64.4 (4) | C10—C11—C27—C17 | 161.9 (2) |
C3—C2—C12—C11 | 8.2 (4) | C12—C11—C27—C17 | −66.7 (3) |
C1—C2—C12—C11 | −166.7 (3) | C10—C11—C27—C26 | −79.9 (3) |
C10—C11—C12—C2 | −36.9 (4) | C12—C11—C27—C26 | 51.4 (4) |
C27—C11—C12—C2 | −168.4 (2) | O6—C25—C29—C12 | 67.9 (4) |
C10—C11—C12—C29 | 89.9 (3) | C26—C25—C29—C12 | −51.9 (4) |
C27—C11—C12—C29 | −41.7 (3) | C30—C25—C29—C12 | −178.3 (3) |
C24—O4—C16—O5 | −179.7 (3) | C2—C12—C29—C25 | 170.0 (3) |
C24—O4—C16—C17 | 2.5 (5) | C11—C12—C29—C25 | 43.8 (4) |
(II) (±)-(11RS,12RS,25RS,27SR)-3,3,7,17,21-pentamethyl-4,12,18,26- tetraoxaheptacyclo[15.11.1.0
2,15.0
5,14.0
6,11.0
19,28.0
20,25] nonacosa-5(14),6,8,10,19 (28),20,22,24-octaene-13,27-dione
top
Crystal data top
C30H28O6 | F(000) = 1024 |
Mr = 484.52 | Dx = 1.377 Mg m−3 |
Monoclinic, P121/c1 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 15334 reflections |
a = 15.517 (3) Å | θ = 2.5–27.4° |
b = 19.411 (4) Å | µ = 0.10 mm−1 |
c = 7.963 (2) Å | T = 296 K |
β = 102.90 (3)° | Block, colourless |
V = 2337.9 (9) Å3 | 0.5 × 0.3 × 0.1 mm |
Z = 4 | |
Data collection top
Rigaku RAXIS-RAPID area-detector diffractometer | 2479 reflections with I > 2σ(I) |
Radiation source: rotating anode | Rint = 0.070 |
Graphite monochromator | θmax = 27.4°, θmin = 1.4° |
ω scans | h = −20→19 |
15334 measured reflections | k = −25→0 |
5186 independent reflections | l = 0→10 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.057 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.161 | H-atom parameters constrained |
S = 0.84 | w = 1/[σ2(Fo2) + (0.0719P)2] where P = (Fo2 + 2Fc2)/3 |
5186 reflections | (Δ/σ)max = 0.001 |
325 parameters | Δρmax = 0.28 e Å−3 |
0 restraints | Δρmin = −0.30 e Å−3 |
Crystal data top
C30H28O6 | V = 2337.9 (9) Å3 |
Mr = 484.52 | Z = 4 |
Monoclinic, P121/c1 | Mo Kα radiation |
a = 15.517 (3) Å | µ = 0.10 mm−1 |
b = 19.411 (4) Å | T = 296 K |
c = 7.963 (2) Å | 0.5 × 0.3 × 0.1 mm |
β = 102.90 (3)° | |
Data collection top
Rigaku RAXIS-RAPID area-detector diffractometer | 2479 reflections with I > 2σ(I) |
15334 measured reflections | Rint = 0.070 |
5186 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.057 | 0 restraints |
wR(F2) = 0.161 | H-atom parameters constrained |
S = 0.84 | Δρmax = 0.28 e Å−3 |
5186 reflections | Δρmin = −0.30 e Å−3 |
325 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.03621 (11) | 0.47239 (9) | 0.7275 (2) | 0.0259 (4) | |
O2 | 0.15966 (12) | 0.52699 (10) | 0.8351 (2) | 0.0386 (5) | |
O3 | 0.05187 (11) | 0.35392 (9) | 1.1577 (2) | 0.0313 (5) | |
O4 | 0.43745 (11) | 0.22477 (9) | 1.1862 (2) | 0.0263 (4) | |
O5 | 0.31980 (13) | 0.21359 (9) | 1.2955 (3) | 0.0361 (5) | |
O6 | 0.43873 (11) | 0.43504 (9) | 1.2440 (2) | 0.0228 (4) | |
C1 | 0.10974 (17) | 0.48231 (14) | 0.8602 (3) | 0.0261 (6) | |
C2 | 0.11841 (16) | 0.43835 (13) | 1.0101 (3) | 0.0204 (6) | |
C3 | 0.05082 (16) | 0.39516 (13) | 1.0219 (3) | 0.0212 (6) | |
C4 | −0.02983 (16) | 0.38913 (13) | 0.8876 (3) | 0.0211 (6) | |
C5 | −0.10339 (17) | 0.34695 (13) | 0.8915 (3) | 0.0261 (6) | |
C6 | −0.17184 (17) | 0.34547 (14) | 0.7468 (4) | 0.0312 (7) | |
H6A | −0.2216 | 0.3190 | 0.7491 | 0.037* | |
C7 | −0.16915 (18) | 0.38181 (14) | 0.5988 (4) | 0.0308 (7) | |
H7A | −0.2156 | 0.3782 | 0.5026 | 0.037* | |
C8 | −0.09805 (17) | 0.42330 (14) | 0.5931 (3) | 0.0263 (6) | |
H8A | −0.0955 | 0.4479 | 0.4941 | 0.032* | |
C9 | −0.03088 (16) | 0.42733 (13) | 0.7378 (3) | 0.0220 (6) | |
C10 | 0.13262 (16) | 0.34270 (13) | 1.2957 (3) | 0.0217 (6) | |
C11 | 0.21214 (15) | 0.36568 (12) | 1.2283 (3) | 0.0189 (6) | |
H11A | 0.2149 | 0.3355 | 1.1310 | 0.023* | |
C12 | 0.19930 (15) | 0.43949 (12) | 1.1563 (3) | 0.0197 (6) | |
H12A | 0.1858 | 0.4690 | 1.2470 | 0.024* | |
C13 | −0.11279 (18) | 0.30387 (14) | 1.0449 (4) | 0.0384 (8) | |
H13A | −0.1677 | 0.2791 | 1.0175 | 0.058* | |
H13B | −0.1119 | 0.3334 | 1.1420 | 0.058* | |
H13C | −0.0647 | 0.2717 | 1.0725 | 0.058* | |
C14 | 0.11824 (19) | 0.38248 (14) | 1.4530 (3) | 0.0318 (7) | |
H14A | 0.0670 | 0.3648 | 1.4872 | 0.048* | |
H14B | 0.1096 | 0.4304 | 1.4244 | 0.048* | |
H14C | 0.1691 | 0.3772 | 1.5461 | 0.048* | |
C15 | 0.13023 (18) | 0.26571 (13) | 1.3266 (3) | 0.0277 (6) | |
H15A | 0.1394 | 0.2416 | 1.2268 | 0.042* | |
H15B | 0.0738 | 0.2533 | 1.3481 | 0.042* | |
H15C | 0.1761 | 0.2536 | 1.4246 | 0.042* | |
C16 | 0.37286 (17) | 0.25337 (14) | 1.2595 (3) | 0.0249 (6) | |
C17 | 0.37308 (16) | 0.32691 (13) | 1.2810 (3) | 0.0198 (6) | |
C18 | 0.43707 (16) | 0.36570 (13) | 1.2355 (3) | 0.0213 (6) | |
C19 | 0.51009 (16) | 0.33507 (14) | 1.1732 (3) | 0.0214 (6) | |
C20 | 0.58517 (17) | 0.36972 (14) | 1.1419 (3) | 0.0260 (6) | |
C21 | 0.64612 (18) | 0.33189 (15) | 1.0763 (3) | 0.0296 (7) | |
H21A | 0.6951 | 0.3543 | 1.0529 | 0.036* | |
C22 | 0.63622 (18) | 0.26188 (15) | 1.0448 (3) | 0.0312 (7) | |
H22A | 0.6774 | 0.2384 | 0.9975 | 0.037* | |
C23 | 0.56672 (17) | 0.22700 (14) | 1.0823 (3) | 0.0277 (7) | |
H23A | 0.5608 | 0.1797 | 1.0640 | 0.033* | |
C24 | 0.50492 (17) | 0.26356 (14) | 1.1483 (3) | 0.0230 (6) | |
C25 | 0.36000 (16) | 0.46824 (13) | 1.2812 (3) | 0.0207 (6) | |
C26 | 0.33610 (16) | 0.42898 (12) | 1.4302 (3) | 0.0214 (6) | |
H26A | 0.2905 | 0.4533 | 1.4723 | 0.026* | |
H26B | 0.3876 | 0.4241 | 1.5243 | 0.026* | |
C27 | 0.30265 (16) | 0.35833 (12) | 1.3606 (3) | 0.0209 (6) | |
H27A | 0.2946 | 0.3293 | 1.4566 | 0.025* | |
C28 | 0.60413 (18) | 0.44519 (14) | 1.1780 (4) | 0.0330 (7) | |
H28A | 0.6582 | 0.4574 | 1.1458 | 0.050* | |
H28B | 0.6098 | 0.4540 | 1.2986 | 0.050* | |
H28C | 0.5565 | 0.4722 | 1.1125 | 0.050* | |
C29 | 0.28511 (16) | 0.46543 (13) | 1.1169 (3) | 0.0218 (6) | |
H29A | 0.2758 | 0.5111 | 1.0667 | 0.026* | |
H29B | 0.3025 | 0.4352 | 1.0333 | 0.026* | |
C30 | 0.38962 (17) | 0.54159 (13) | 1.3277 (3) | 0.0285 (7) | |
H30A | 0.4357 | 0.5415 | 1.4308 | 0.043* | |
H30B | 0.3404 | 0.5681 | 1.3467 | 0.043* | |
H30C | 0.4115 | 0.5617 | 1.2352 | 0.043* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0253 (10) | 0.0285 (11) | 0.0227 (10) | −0.0034 (8) | 0.0029 (8) | 0.0051 (8) |
O2 | 0.0364 (12) | 0.0387 (13) | 0.0368 (12) | −0.0130 (10) | 0.0001 (10) | 0.0183 (10) |
O3 | 0.0210 (10) | 0.0423 (13) | 0.0296 (11) | −0.0046 (9) | 0.0037 (8) | 0.0168 (9) |
O4 | 0.0249 (10) | 0.0233 (10) | 0.0305 (10) | 0.0026 (8) | 0.0057 (9) | −0.0056 (8) |
O5 | 0.0371 (12) | 0.0228 (11) | 0.0523 (13) | −0.0039 (9) | 0.0185 (10) | −0.0036 (10) |
O6 | 0.0196 (9) | 0.0197 (10) | 0.0310 (10) | −0.0005 (8) | 0.0098 (8) | −0.0011 (8) |
C1 | 0.0247 (15) | 0.0248 (15) | 0.0288 (15) | 0.0023 (12) | 0.0062 (13) | 0.0018 (12) |
C2 | 0.0221 (14) | 0.0182 (14) | 0.0231 (14) | 0.0012 (11) | 0.0092 (11) | 0.0009 (11) |
C3 | 0.0223 (14) | 0.0207 (14) | 0.0228 (14) | 0.0045 (11) | 0.0094 (12) | 0.0024 (11) |
C4 | 0.0200 (14) | 0.0210 (15) | 0.0223 (14) | 0.0030 (11) | 0.0045 (12) | −0.0014 (11) |
C5 | 0.0232 (15) | 0.0232 (15) | 0.0326 (16) | 0.0020 (12) | 0.0079 (13) | 0.0009 (12) |
C6 | 0.0171 (14) | 0.0272 (16) | 0.0501 (19) | −0.0042 (12) | 0.0090 (14) | −0.0021 (14) |
C7 | 0.0244 (15) | 0.0310 (16) | 0.0334 (16) | 0.0018 (12) | −0.0014 (13) | −0.0063 (13) |
C8 | 0.0265 (15) | 0.0280 (16) | 0.0241 (15) | 0.0055 (12) | 0.0055 (13) | −0.0006 (12) |
C9 | 0.0221 (14) | 0.0215 (14) | 0.0213 (14) | 0.0014 (11) | 0.0029 (11) | −0.0039 (11) |
C10 | 0.0194 (14) | 0.0223 (14) | 0.0225 (14) | −0.0005 (11) | 0.0031 (12) | 0.0042 (11) |
C11 | 0.0231 (14) | 0.0170 (14) | 0.0175 (13) | −0.0005 (11) | 0.0062 (11) | −0.0013 (10) |
C12 | 0.0212 (14) | 0.0192 (14) | 0.0179 (13) | 0.0003 (11) | 0.0027 (11) | 0.0004 (11) |
C13 | 0.0237 (16) | 0.0418 (19) | 0.0486 (19) | −0.0081 (14) | 0.0059 (14) | 0.0150 (16) |
C14 | 0.0380 (17) | 0.0322 (17) | 0.0306 (16) | 0.0005 (14) | 0.0192 (14) | −0.0004 (13) |
C15 | 0.0323 (16) | 0.0249 (15) | 0.0275 (15) | −0.0031 (12) | 0.0102 (13) | 0.0048 (12) |
C16 | 0.0240 (15) | 0.0287 (16) | 0.0203 (14) | 0.0022 (13) | 0.0013 (12) | −0.0015 (12) |
C17 | 0.0216 (14) | 0.0206 (14) | 0.0160 (13) | 0.0019 (11) | 0.0016 (11) | −0.0014 (11) |
C18 | 0.0214 (14) | 0.0225 (15) | 0.0185 (13) | 0.0027 (12) | 0.0011 (11) | −0.0018 (11) |
C19 | 0.0195 (14) | 0.0277 (15) | 0.0154 (13) | 0.0028 (12) | 0.0005 (11) | −0.0006 (11) |
C20 | 0.0236 (15) | 0.0321 (16) | 0.0219 (14) | 0.0012 (12) | 0.0043 (12) | 0.0032 (12) |
C21 | 0.0272 (16) | 0.0394 (18) | 0.0239 (14) | 0.0046 (13) | 0.0094 (13) | 0.0055 (13) |
C22 | 0.0264 (16) | 0.0425 (19) | 0.0245 (15) | 0.0139 (14) | 0.0052 (13) | 0.0000 (13) |
C23 | 0.0273 (15) | 0.0283 (16) | 0.0243 (15) | 0.0085 (13) | −0.0009 (12) | −0.0028 (12) |
C24 | 0.0225 (14) | 0.0279 (16) | 0.0173 (13) | 0.0026 (12) | 0.0018 (11) | −0.0003 (11) |
C25 | 0.0167 (13) | 0.0201 (14) | 0.0266 (14) | 0.0012 (11) | 0.0072 (12) | −0.0017 (11) |
C26 | 0.0188 (13) | 0.0233 (14) | 0.0222 (14) | 0.0004 (11) | 0.0044 (11) | −0.0039 (11) |
C27 | 0.0233 (14) | 0.0196 (14) | 0.0198 (13) | 0.0005 (11) | 0.0053 (11) | 0.0027 (11) |
C28 | 0.0286 (16) | 0.0366 (18) | 0.0372 (17) | −0.0033 (13) | 0.0147 (13) | 0.0014 (14) |
C29 | 0.0227 (14) | 0.0224 (14) | 0.0203 (13) | −0.0025 (11) | 0.0047 (11) | 0.0027 (11) |
C30 | 0.0286 (16) | 0.0258 (15) | 0.0308 (15) | −0.0010 (12) | 0.0058 (13) | −0.0018 (12) |
Geometric parameters (Å, º) top
O1—C9 | 1.376 (3) | C14—H14A | 0.9600 |
O1—C1 | 1.385 (3) | C14—H14B | 0.9600 |
O2—C1 | 1.209 (3) | C14—H14C | 0.9600 |
O3—C3 | 1.343 (3) | C15—H15A | 0.9600 |
O3—C10 | 1.486 (3) | C15—H15B | 0.9600 |
O4—C24 | 1.377 (3) | C15—H15C | 0.9600 |
O4—C16 | 1.384 (3) | C16—C17 | 1.438 (4) |
O5—C16 | 1.209 (3) | C17—C18 | 1.358 (3) |
O6—C18 | 1.348 (3) | C17—C27 | 1.509 (3) |
O6—C25 | 1.469 (3) | C18—C19 | 1.461 (4) |
C1—C2 | 1.449 (3) | C19—C24 | 1.402 (3) |
C2—C3 | 1.362 (3) | C19—C20 | 1.415 (4) |
C2—C12 | 1.509 (3) | C20—C21 | 1.388 (4) |
C3—C4 | 1.458 (3) | C20—C28 | 1.509 (4) |
C4—C9 | 1.401 (3) | C21—C22 | 1.384 (4) |
C4—C5 | 1.411 (3) | C21—H21A | 0.9300 |
C5—C6 | 1.382 (4) | C22—C23 | 1.362 (4) |
C5—C13 | 1.514 (4) | C22—H22A | 0.9300 |
C6—C7 | 1.382 (4) | C23—C24 | 1.387 (3) |
C6—H6A | 0.9300 | C23—H23A | 0.9300 |
C7—C8 | 1.375 (4) | C25—C30 | 1.517 (3) |
C7—H7A | 0.9300 | C25—C26 | 1.524 (3) |
C8—C9 | 1.372 (3) | C25—C29 | 1.545 (3) |
C8—H8A | 0.9300 | C26—C27 | 1.526 (3) |
C10—C15 | 1.516 (4) | C26—H26A | 0.9700 |
C10—C11 | 1.518 (3) | C26—H26B | 0.9700 |
C10—C14 | 1.530 (3) | C27—H27A | 0.9800 |
C11—C12 | 1.540 (3) | C28—H28A | 0.9600 |
C11—C27 | 1.563 (3) | C28—H28B | 0.9600 |
C11—H11A | 0.9800 | C28—H28C | 0.9600 |
C12—C29 | 1.520 (3) | C29—H29A | 0.9700 |
C12—H12A | 0.9800 | C29—H29B | 0.9700 |
C13—H13A | 0.9600 | C30—H30A | 0.9600 |
C13—H13B | 0.9600 | C30—H30B | 0.9600 |
C13—H13C | 0.9600 | C30—H30C | 0.9600 |
| | | |
C9—O1—C1 | 123.2 (2) | H15A—C15—H15C | 109.5 |
C3—O3—C10 | 122.63 (19) | H15B—C15—H15C | 109.5 |
C24—O4—C16 | 122.1 (2) | O5—C16—O4 | 116.1 (2) |
C18—O6—C25 | 116.16 (19) | O5—C16—C17 | 126.1 (3) |
O2—C1—O1 | 115.0 (2) | O4—C16—C17 | 117.8 (2) |
O2—C1—C2 | 127.9 (2) | C18—C17—C16 | 120.1 (2) |
O1—C1—C2 | 117.1 (2) | C18—C17—C27 | 121.9 (2) |
C3—C2—C1 | 119.2 (2) | C16—C17—C27 | 117.9 (2) |
C3—C2—C12 | 118.5 (2) | O6—C18—C17 | 123.2 (2) |
C1—C2—C12 | 122.3 (2) | O6—C18—C19 | 114.6 (2) |
O3—C3—C2 | 123.5 (2) | C17—C18—C19 | 122.2 (2) |
O3—C3—C4 | 113.4 (2) | C24—C19—C20 | 118.0 (2) |
C2—C3—C4 | 123.1 (2) | C24—C19—C18 | 115.3 (2) |
C9—C4—C5 | 118.1 (2) | C20—C19—C18 | 126.7 (2) |
C9—C4—C3 | 115.3 (2) | C21—C20—C19 | 118.1 (3) |
C5—C4—C3 | 126.6 (2) | C21—C20—C28 | 117.7 (3) |
C6—C5—C4 | 117.9 (2) | C19—C20—C28 | 124.1 (2) |
C6—C5—C13 | 117.8 (2) | C22—C21—C20 | 122.0 (3) |
C4—C5—C13 | 124.3 (2) | C22—C21—H21A | 119.0 |
C7—C6—C5 | 122.4 (3) | C20—C21—H21A | 119.0 |
C7—C6—H6A | 118.8 | C23—C22—C21 | 120.6 (3) |
C5—C6—H6A | 118.8 | C23—C22—H22A | 119.7 |
C8—C7—C6 | 120.3 (3) | C21—C22—H22A | 119.7 |
C8—C7—H7A | 119.9 | C22—C23—C24 | 118.5 (3) |
C6—C7—H7A | 119.9 | C22—C23—H23A | 120.8 |
C9—C8—C7 | 118.1 (3) | C24—C23—H23A | 120.8 |
C9—C8—H8A | 121.0 | O4—C24—C23 | 115.3 (2) |
C7—C8—H8A | 121.0 | O4—C24—C19 | 122.2 (2) |
C8—C9—O1 | 115.4 (2) | C23—C24—C19 | 122.5 (3) |
C8—C9—C4 | 123.1 (3) | O6—C25—C30 | 103.93 (19) |
O1—C9—C4 | 121.5 (2) | O6—C25—C26 | 107.21 (19) |
O3—C10—C15 | 102.56 (19) | C30—C25—C26 | 113.1 (2) |
O3—C10—C11 | 108.26 (18) | O6—C25—C29 | 108.41 (19) |
C15—C10—C11 | 113.5 (2) | C30—C25—C29 | 111.7 (2) |
O3—C10—C14 | 106.1 (2) | C26—C25—C29 | 112.0 (2) |
C15—C10—C14 | 110.6 (2) | C25—C26—C27 | 106.8 (2) |
C11—C10—C14 | 114.8 (2) | C25—C26—H26A | 110.4 |
C10—C11—C12 | 110.9 (2) | C27—C26—H26A | 110.4 |
C10—C11—C27 | 114.45 (19) | C25—C26—H26B | 110.4 |
C12—C11—C27 | 110.99 (19) | C27—C26—H26B | 110.4 |
C10—C11—H11A | 106.7 | H26A—C26—H26B | 108.6 |
C12—C11—H11A | 106.7 | C17—C27—C26 | 107.2 (2) |
C27—C11—H11A | 106.7 | C17—C27—C11 | 112.3 (2) |
C2—C12—C29 | 117.5 (2) | C26—C27—C11 | 110.1 (2) |
C2—C12—C11 | 106.84 (19) | C17—C27—H27A | 109.0 |
C29—C12—C11 | 109.8 (2) | C26—C27—H27A | 109.0 |
C2—C12—H12A | 107.4 | C11—C27—H27A | 109.0 |
C29—C12—H12A | 107.4 | C20—C28—H28A | 109.5 |
C11—C12—H12A | 107.4 | C20—C28—H28B | 109.5 |
C5—C13—H13A | 109.5 | H28A—C28—H28B | 109.5 |
C5—C13—H13B | 109.5 | C20—C28—H28C | 109.5 |
H13A—C13—H13B | 109.5 | H28A—C28—H28C | 109.5 |
C5—C13—H13C | 109.5 | H28B—C28—H28C | 109.5 |
H13A—C13—H13C | 109.5 | C12—C29—C25 | 111.4 (2) |
H13B—C13—H13C | 109.5 | C12—C29—H29A | 109.3 |
C10—C14—H14A | 109.5 | C25—C29—H29A | 109.3 |
C10—C14—H14B | 109.5 | C12—C29—H29B | 109.3 |
H14A—C14—H14B | 109.5 | C25—C29—H29B | 109.3 |
C10—C14—H14C | 109.5 | H29A—C29—H29B | 108.0 |
H14A—C14—H14C | 109.5 | C25—C30—H30A | 109.5 |
H14B—C14—H14C | 109.5 | C25—C30—H30B | 109.5 |
C10—C15—H15A | 109.5 | H30A—C30—H30B | 109.5 |
C10—C15—H15B | 109.5 | C25—C30—H30C | 109.5 |
H15A—C15—H15B | 109.5 | H30A—C30—H30C | 109.5 |
C10—C15—H15C | 109.5 | H30B—C30—H30C | 109.5 |
| | | |
C9—O1—C1—O2 | −175.3 (2) | O5—C16—C17—C18 | 179.8 (2) |
C9—O1—C1—C2 | 5.3 (3) | O4—C16—C17—C18 | −2.2 (3) |
O2—C1—C2—C3 | 173.8 (3) | O5—C16—C17—C27 | 2.0 (4) |
O1—C1—C2—C3 | −6.8 (4) | O4—C16—C17—C27 | 179.9 (2) |
O2—C1—C2—C12 | −5.1 (4) | C25—O6—C18—C17 | −8.8 (3) |
O1—C1—C2—C12 | 174.3 (2) | C25—O6—C18—C19 | 171.27 (19) |
C10—O3—C3—C2 | −10.4 (4) | C16—C17—C18—O6 | 176.6 (2) |
C10—O3—C3—C4 | 169.5 (2) | C27—C17—C18—O6 | −5.7 (4) |
C1—C2—C3—O3 | −178.2 (2) | C16—C17—C18—C19 | −3.5 (4) |
C12—C2—C3—O3 | 0.7 (4) | C27—C17—C18—C19 | 174.2 (2) |
C1—C2—C3—C4 | 1.9 (4) | O6—C18—C19—C24 | −174.3 (2) |
C12—C2—C3—C4 | −179.1 (2) | C17—C18—C19—C24 | 5.8 (3) |
O3—C3—C4—C9 | −175.3 (2) | O6—C18—C19—C20 | 7.9 (3) |
C2—C3—C4—C9 | 4.5 (4) | C17—C18—C19—C20 | −172.0 (2) |
O3—C3—C4—C5 | 1.6 (4) | C24—C19—C20—C21 | 4.7 (3) |
C2—C3—C4—C5 | −178.5 (3) | C18—C19—C20—C21 | −177.6 (2) |
C9—C4—C5—C6 | 0.5 (4) | C24—C19—C20—C28 | −174.3 (2) |
C3—C4—C5—C6 | −176.4 (2) | C18—C19—C20—C28 | 3.4 (4) |
C9—C4—C5—C13 | −178.7 (2) | C19—C20—C21—C22 | −1.4 (4) |
C3—C4—C5—C13 | 4.4 (4) | C28—C20—C21—C22 | 177.7 (2) |
C4—C5—C6—C7 | 2.0 (4) | C20—C21—C22—C23 | −1.9 (4) |
C13—C5—C6—C7 | −178.7 (3) | C21—C22—C23—C24 | 1.7 (4) |
C5—C6—C7—C8 | −2.3 (4) | C16—O4—C24—C23 | 177.3 (2) |
C6—C7—C8—C9 | −0.1 (4) | C16—O4—C24—C19 | −3.3 (3) |
C7—C8—C9—O1 | −176.7 (2) | C22—C23—C24—O4 | −178.8 (2) |
C7—C8—C9—C4 | 2.7 (4) | C22—C23—C24—C19 | 1.8 (4) |
C1—O1—C9—C8 | −179.1 (2) | C20—C19—C24—O4 | 175.6 (2) |
C1—O1—C9—C4 | 1.5 (4) | C18—C19—C24—O4 | −2.4 (3) |
C5—C4—C9—C8 | −2.9 (4) | C20—C19—C24—C23 | −5.0 (4) |
C3—C4—C9—C8 | 174.3 (2) | C18—C19—C24—C23 | 177.0 (2) |
C5—C4—C9—O1 | 176.5 (2) | C18—O6—C25—C30 | 165.99 (19) |
C3—C4—C9—O1 | −6.3 (3) | C18—O6—C25—C26 | 46.0 (3) |
C3—O3—C10—C15 | −137.4 (2) | C18—O6—C25—C29 | −75.1 (2) |
C3—O3—C10—C11 | −17.2 (3) | O6—C25—C26—C27 | −69.4 (2) |
C3—O3—C10—C14 | 106.6 (2) | C30—C25—C26—C27 | 176.7 (2) |
O3—C10—C11—C12 | 52.4 (3) | C29—C25—C26—C27 | 49.4 (3) |
C15—C10—C11—C12 | 165.5 (2) | C18—C17—C27—C26 | −18.7 (3) |
C14—C10—C11—C12 | −66.0 (3) | C16—C17—C27—C26 | 159.1 (2) |
O3—C10—C11—C27 | 178.91 (19) | C18—C17—C27—C11 | 102.5 (3) |
C15—C10—C11—C27 | −68.0 (3) | C16—C17—C27—C11 | −79.8 (3) |
C14—C10—C11—C27 | 60.5 (3) | C25—C26—C27—C17 | 54.1 (2) |
C3—C2—C12—C29 | 157.7 (2) | C25—C26—C27—C11 | −68.3 (2) |
C1—C2—C12—C29 | −23.5 (3) | C10—C11—C27—C17 | 134.9 (2) |
C3—C2—C12—C11 | 33.8 (3) | C12—C11—C27—C17 | −98.6 (2) |
C1—C2—C12—C11 | −147.3 (2) | C10—C11—C27—C26 | −105.6 (2) |
C10—C11—C12—C2 | −60.7 (2) | C12—C11—C27—C26 | 20.8 (3) |
C27—C11—C12—C2 | 170.86 (19) | C2—C12—C29—C25 | 176.1 (2) |
C10—C11—C12—C29 | 170.81 (19) | C11—C12—C29—C25 | −61.6 (3) |
C27—C11—C12—C29 | 42.4 (3) | O6—C25—C29—C12 | 131.7 (2) |
C24—O4—C16—O5 | −176.1 (2) | C30—C25—C29—C12 | −114.4 (2) |
C24—O4—C16—C17 | 5.7 (3) | C26—C25—C29—C12 | 13.6 (3) |
Experimental details
| (I) | (II) |
Crystal data |
Chemical formula | C30H28O6 | C30H28O6 |
Mr | 484.52 | 484.52 |
Crystal system, space group | Monoclinic, P21 | Monoclinic, P121/c1 |
Temperature (K) | 296 | 296 |
a, b, c (Å) | 11.001 (2), 8.307 (2), 13.332 (3) | 15.517 (3), 19.411 (4), 7.963 (2) |
β (°) | 90.39 (3) | 102.90 (3) |
V (Å3) | 1218.3 (4) | 2337.9 (9) |
Z | 2 | 4 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.09 | 0.10 |
Crystal size (mm) | 0.4 × 0.2 × 0.1 | 0.5 × 0.3 × 0.1 |
|
Data collection |
Diffractometer | MAC DIP 2030K area-detector diffractometer | Rigaku RAXIS-RAPID area-detector diffractometer |
Absorption correction | – | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5888, 2725, 2715 | 15334, 5186, 2479 |
Rint | 0.024 | 0.070 |
(sin θ/λ)max (Å−1) | 0.644 | 0.647 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.054, 0.138, 1.23 | 0.057, 0.161, 0.84 |
No. of reflections | 2725 | 5186 |
No. of parameters | 325 | 325 |
No. of restraints | 1 | 0 |
H-atom treatment | H-atom parameters constrained | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.17, −0.26 | 0.28, −0.30 |
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Most coumarins are widely distributed among higher plants, while only a few occur in animals and microorganisms, e.g. aflatoxin from Aspergillus and armillarisin from Armillarialla tabescens. Coumarins and their derivatives are active natural products which have many biological activities, such as anticoagulant, antimicrobial (Kwon et al., 2002) and non-specific spasmolytic action (Oliveira et al., 2001). In recent years, further investigations have indicated that they have anti-HIV activity (Yang, 2001). Therefore, these compounds are widely applied in food, chemical engineering and medical fields and extensive future research into cumarin derivatives is likely.
Gerbera piloselloides (L.) Cass has been used as an antipyretic and alexipharmic agent, and for regulating the flow of vital energy and the condition of the blood in traditional Chinese medicine (Jiangsu New Medical College, 1977). Besides 15 known compounds (Xiao et al.,. 2002), two novel coumarin dimers, dibothrioclinin I and II, hereinafter (I) and (II), respectively, have been isolated from Gerbera piloselloides (L.) Cass. The structures and relative stereochemistry of these two compounds have been established by spectroscopy. The present study reports their crystal structures, which confirms the relative stereochemistry and establishes the conformations of all rings in the molecules. \sch
Dibothrioclinin I, (I) (Fig. 1a), is enantiopure ([α]D = 24°, c 0.05, CHCl3), although the absolute configuration has not been established, while dibothrioclinin II, (II) (Fig. 1 b), is racemic. The compounds are epimers and their skeletons differ only by inversion of the configuration at C12, so that the stereochemistry of the ring C/D junction is cis in (I) and trans in (II). Each compound incorporates two structural units of bothrioclinin (Ferdinand & Christa, 1977) at opposite ends of the molecule. These units are dimerized by the formation of two single bonds, one of which is a direct connection between rings C and E via C11—C27, while the second connects ring C, via C12—C29, to one of the methyl substituents on ring E, thereby building a seventh six-membered ring, D.
The two coumarin skeletons in each structure, rings A/B and F/G, are each almost planar, with a mean deviation of 0.014 (3) Å in (I) and 0.019 (2) Å in (II). The dihedral angles between rings A and B, and between rings F and G, are 2.1 (1) and 3.7 (1)°, respectively, for (I), and 4.1 (1) and 3.7 (1)°, respectively, for (II). These properties are similar to those observed in the structure of ethuliacoumarin A (Larsen et al., 1992).
The corresponding six-membered rings in each compound have similar conformations, except for differences in the conformations of rings C, D and E because of the effect of the inversion at C12. The 2H-dihydropyran ring C adopts a half-chair conformation in (I), with puckering parameters (Cremer & Pople, 1975) Q = 0.444 (3) Å, θ = 128.1 (4)° and ϕ = 98.9 (5)° for the atom sequence O3, C3, C2, C12, C11, C10. In (II), ring C adopts a distorted envelope conformation, with puckering parameters for the corresponding atom sequence Q = 0.525 (3) Å, θ = 122.1 (3)° and ϕ = 46.5 (3)°. The 2H-dihydropyran ring E has an almost ideal envelope form in (I), with puckering parameters Q = 0.544 (3) Å, θ = 55.1 (3)° and ϕ = 240.0 (4)° for the atom sequence O6, C18, C17, C27, C26, C25. In (II), this ring is halfway between an envelope and a half-chair conformation, with puckering parameters for the corresponding atom sequence Q = 0.574 (3) Å, θ = 53.9 (3)° and ϕ = 259.8 (3)°.
The greatest difference between the two compounds lies in the conformation of ring D. In dibothrioclinin I, ring D has a slightly twisted chair conformation owing to the cis fusion with ring C. The puckering parameters are Q = 0.537 (3) Å, θ = 13.5 (4)° and ϕ =241 (2)° for the atom sequence C11, C12, C29, C25, C26, C27. This is also indicated by the smaller C27—C11—C12—C29 and C11—C12—C29—C25 torsion angles of −41.7 (3) and 43.8 (4)°, respectively. The mean of the other four torsion angles is 55.7 (5)° (the torsion angle of the normal chair form of cyclohexane is 56°). In (II), the trans C/D ring junction imposes a conformation on ring D that is halfway between a boat and a twisted boat. The puckering parameters are Q = 0.815 (3) Å, θ = 87.4 (2)° and ϕ = 255.5 (2)°, for the same atom sequence as in (I). This is supported by the C12—C11—C27—C26 and C26—C25—C29—C12 torsion angles of 20.8 (3) and 13.6 (3)°, repsectively. The mean of the other four torsion angles is 55.6 (4)° (the torsion angles of the normal boat form of cyclohexane are 0 and 56°).
Compounds (I) and (II) also exhibit different molecular stereo structures. The dihedral angle between the plane of rings A/B and the least-squares plane through ring C (including puckered atoms) is 4.8 (1)° for (I) and 16.8 (1)° for (II). The dihedral angle between the least-squares planes through rings A/B/C and E/F/G is 72.4 (1)° for (I) and 80.4 (1)° for (II). However, while the inversion at C12 influences the stereochemistry of the ring C/D junction, the stereo structure of rings E, F and G remains unaffected. This can be inferred from the dihedral angle between the plane of rings F/G and the least-squares plane through ring E (including puckered atoms), which is 8.9 (1)° for (I) and 10.9 (1)° for (II).