Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S010827010200464X/ln1137sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S010827010200464X/ln1137Isup2.hkl |
CCDC reference: 187905
The pH of a mixture of ErCl3 [1.0 mmol, prepared from Er2O3 (0.191 g) dissolved in 35% HCl], nitrilotriacetic acid (0.19 g, 1.0 mmol) in H2O (18 ml) was adjusted to 4.96 with 10% NH3·H2O under vigorous stirring. The reaction mixture was then heated at 443 K for 6 d under autogeneous pressure in a sealed 25 ml Teflon-lined stainless steel vessel. Red crystals of (I) were isolated after the reaction solution was cooled down gradually and washed with water and ethanol. Spectroscopic analysis: IR (solid KBr pellet, ν, cm-1): 1599 (s), 1468 (m), 1429 (s), 1396 (m), 1338 (m), 1315 (s), 1300 (m), 1228 (m), 1132 (m), 1117 (m), 1024 (s), 991 (m), 970 (m).
The H atoms on C atoms were generated geometrically. The H atoms of the water ligand were clearly visible in difference maps. They were placed in the difference map positions and constrained to ride on their parent O atom. All H atoms were assigned fixed isotropic displacement parameters, with Uiso(H) = 1.2Ueq(parent atom). The highest residual peak (0.83 e Å-3) is at the position (0.3360, 0.2275, 0.0774), which is 0.91 Å from the Er atom; the deepest hole (-1.04 e Å-3) is at the position (0.6579, 0.1802, 0.6212), which is 0.83 Å from the Er atom.
Data collection: SMART (Siemens, 1996); cell refinement: SMART and SAINT (Siemens, 1994); data reduction: SMART and SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Siemens, 1994); software used to prepare material for publication: SHELXL97.
[Er(C6H6NO6)(H2O)] | F(000) = 700 |
Mr = 373.39 | Dx = 2.852 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 6.7262 (6) Å | Cell parameters from 920 reflections |
b = 6.5427 (4) Å | θ = 2.1–25.1° |
c = 19.800 (2) Å | µ = 9.67 mm−1 |
β = 93.444 (4)° | T = 293 K |
V = 869.8 (1) Å3 | Prism, red |
Z = 4 | 0.16 × 0.08 × 0.06 mm |
Bruker SMART CCD area-detector diffractometer | 1520 independent reflections |
Radiation source: fine-focus sealed tube | 1340 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
ϕ and ω scans | θmax = 25.1°, θmin = 2.1° |
Absorption correction: empirical (using intensity measurements) (SADABS; Sheldrick, 1996) | h = −5→7 |
Tmin = 0.328, Tmax = 0.560 | k = −7→5 |
2640 measured reflections | l = −23→23 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.032 | H-atom parameters constrained |
wR(F2) = 0.072 | w = 1/[σ2(Fo2) + (0.0119P)2 + 12.9152P] where P = (Fo2 + 2Fc2)/3 |
S = 1.09 | (Δ/σ)max < 0.001 |
1520 reflections | Δρmax = 0.83 e Å−3 |
137 parameters | Δρmin = −1.04 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0110 (5) |
[Er(C6H6NO6)(H2O)] | V = 869.8 (1) Å3 |
Mr = 373.39 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 6.7262 (6) Å | µ = 9.67 mm−1 |
b = 6.5427 (4) Å | T = 293 K |
c = 19.800 (2) Å | 0.16 × 0.08 × 0.06 mm |
β = 93.444 (4)° |
Bruker SMART CCD area-detector diffractometer | 1520 independent reflections |
Absorption correction: empirical (using intensity measurements) (SADABS; Sheldrick, 1996) | 1340 reflections with I > 2σ(I) |
Tmin = 0.328, Tmax = 0.560 | Rint = 0.033 |
2640 measured reflections |
R[F2 > 2σ(F2)] = 0.032 | 0 restraints |
wR(F2) = 0.072 | H-atom parameters constrained |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0119P)2 + 12.9152P] where P = (Fo2 + 2Fc2)/3 |
1520 reflections | Δρmax = 0.83 e Å−3 |
137 parameters | Δρmin = −1.04 e Å−3 |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Er | 0.23184 (5) | 0.23483 (5) | 0.104751 (17) | 0.01708 (19) | |
O1 | 0.5554 (9) | 0.1790 (10) | 0.0721 (3) | 0.0291 (14) | |
O2 | 0.8855 (8) | 0.1769 (9) | 0.0918 (3) | 0.0271 (13) | |
O3 | 0.1142 (9) | 0.4405 (10) | 0.1927 (3) | 0.0276 (14) | |
O4 | 0.1656 (9) | 0.5791 (9) | 0.2944 (3) | 0.0273 (14) | |
O5 | 0.2049 (10) | 0.8897 (9) | 0.0817 (3) | 0.0310 (15) | |
O6 | 0.1748 (9) | 0.5596 (9) | 0.0618 (3) | 0.0261 (13) | |
O7 | 0.1781 (9) | 0.2084 (9) | −0.0129 (3) | 0.0282 (13) | |
H7A | 0.1576 | 0.3224 | −0.0291 | 0.034* | |
H7B | 0.0875 | 0.1206 | −0.0315 | 0.034* | |
N | 0.4906 (10) | 0.4853 (11) | 0.1587 (4) | 0.0230 (15) | |
C1 | 0.6957 (12) | 0.3993 (14) | 0.1572 (5) | 0.028 (2) | |
H1A | 0.7326 | 0.3374 | 0.2007 | 0.033* | |
H1B | 0.7887 | 0.5094 | 0.1500 | 0.033* | |
C2 | 0.7122 (12) | 0.2421 (12) | 0.1025 (4) | 0.0235 (18) | |
C3 | 0.4438 (13) | 0.5275 (15) | 0.2284 (4) | 0.0266 (19) | |
H3A | 0.4934 | 0.6623 | 0.2409 | 0.032* | |
H3B | 0.5129 | 0.4292 | 0.2579 | 0.032* | |
C4 | 0.2283 (13) | 0.5187 (12) | 0.2395 (4) | 0.0227 (19) | |
C5 | 0.4784 (13) | 0.6706 (13) | 0.1159 (5) | 0.0285 (19) | |
H5A | 0.5686 | 0.6558 | 0.0798 | 0.034* | |
H5B | 0.5222 | 0.7875 | 0.1430 | 0.034* | |
C6 | 0.2723 (14) | 0.7115 (13) | 0.0854 (4) | 0.0268 (19) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Er | 0.0157 (2) | 0.0137 (2) | 0.0217 (2) | 0.00028 (14) | 0.00030 (13) | −0.00050 (14) |
O1 | 0.018 (3) | 0.033 (3) | 0.036 (3) | 0.002 (3) | 0.000 (3) | −0.009 (3) |
O2 | 0.017 (3) | 0.026 (3) | 0.040 (3) | 0.002 (3) | 0.005 (3) | −0.007 (3) |
O3 | 0.020 (3) | 0.034 (4) | 0.029 (3) | 0.001 (3) | 0.000 (2) | −0.004 (3) |
O4 | 0.028 (3) | 0.029 (3) | 0.025 (3) | −0.006 (3) | −0.002 (3) | −0.003 (3) |
O5 | 0.039 (4) | 0.020 (3) | 0.033 (3) | 0.002 (3) | −0.008 (3) | 0.001 (3) |
O6 | 0.035 (4) | 0.016 (3) | 0.026 (3) | 0.000 (3) | −0.009 (3) | 0.003 (2) |
O7 | 0.030 (3) | 0.027 (3) | 0.028 (3) | −0.003 (3) | 0.004 (3) | −0.003 (3) |
N | 0.016 (3) | 0.023 (4) | 0.030 (4) | 0.000 (3) | 0.003 (3) | −0.005 (3) |
C1 | 0.016 (4) | 0.025 (4) | 0.042 (5) | 0.005 (3) | −0.004 (4) | −0.006 (4) |
C2 | 0.017 (4) | 0.022 (4) | 0.032 (5) | −0.001 (4) | 0.008 (4) | 0.001 (4) |
C3 | 0.021 (4) | 0.033 (5) | 0.026 (4) | 0.000 (4) | −0.002 (4) | −0.011 (4) |
C4 | 0.036 (5) | 0.016 (4) | 0.016 (4) | 0.000 (4) | −0.001 (4) | 0.002 (3) |
C5 | 0.028 (5) | 0.023 (4) | 0.034 (5) | −0.007 (4) | 0.001 (4) | −0.003 (4) |
C6 | 0.035 (5) | 0.019 (5) | 0.026 (4) | 0.001 (4) | 0.001 (4) | 0.001 (3) |
Er—O1 | 2.336 (6) | O7—H7A | 0.8200 |
Er—O2i | 2.359 (6) | O7—H7B | 0.9000 |
Er—O3 | 2.373 (6) | N—C3 | 1.459 (11) |
Er—O4ii | 2.310 (6) | N—C5 | 1.479 (11) |
Er—O5iii | 2.309 (6) | N—C1 | 1.492 (10) |
Er—O6 | 2.312 (6) | C1—C2 | 1.502 (11) |
Er—O7 | 2.343 (6) | C1—H1A | 0.9700 |
Er—N | 2.575 (7) | C1—H1B | 0.9700 |
O1—C2 | 1.253 (10) | C3—C4 | 1.480 (12) |
O2—C2 | 1.271 (10) | C3—H3A | 0.9700 |
O3—C4 | 1.275 (10) | C3—H3B | 0.9700 |
O4—C4 | 1.254 (10) | C5—C6 | 1.502 (13) |
O5—C6 | 1.252 (10) | C5—H5A | 0.9700 |
O6—C6 | 1.264 (10) | C5—H5B | 0.9700 |
O4ii—Er—O1 | 86.3 (2) | Er—O7—H7B | 121.0 |
O5iii—Er—O1 | 81.7 (2) | H7A—O7—H7B | 109.1 |
O6—Er—O1 | 100.3 (2) | C3—N—C5 | 112.3 (7) |
O1—Er—O2i | 151.1 (2) | C3—N—C1 | 110.0 (7) |
O4ii—Er—O2i | 105.4 (2) | C5—N—C1 | 108.5 (7) |
O5iii—Er—O2i | 75.9 (2) | C3—N—Er | 109.5 (5) |
O6—Er—O2i | 88.1 (2) | C5—N—Er | 105.7 (5) |
O7—Er—O2i | 77.7 (2) | C1—N—Er | 110.7 (5) |
O1—Er—O3 | 130.5 (2) | N—C1—C2 | 112.4 (7) |
O2i—Er—O3 | 78.5 (2) | N—C1—H1A | 109.1 |
O4ii—Er—O3 | 73.2 (2) | C2—C1—H1A | 109.1 |
O5iii—Er—O3 | 132.4 (2) | N—C1—H1B | 109.1 |
O6—Er—O3 | 72.1 (2) | C2—C1—H1B | 109.1 |
O7—Er—O3 | 137.1 (2) | H1A—C1—H1B | 107.9 |
O5iii—Er—O4ii | 75.8 (2) | O1—C2—O2 | 124.3 (8) |
O4ii—Er—O6 | 139.2 (2) | O1—C2—C1 | 118.4 (7) |
O5iii—Er—O6 | 144.8 (2) | O2—C2—C1 | 117.3 (7) |
O1—Er—O7 | 78.7 (2) | N—C3—C4 | 113.7 (7) |
O4ii—Er—O7 | 147.9 (2) | N—C3—H3A | 108.8 |
O5iii—Er—O7 | 74.1 (2) | C4—C3—H3A | 108.8 |
O6—Er—O7 | 71.9 (2) | N—C3—H3B | 108.8 |
O1—Er—N | 66.2 (2) | C4—C3—H3B | 108.8 |
O2i—Er—N | 141.8 (2) | H3A—C3—H3B | 107.7 |
O3—Er—N | 65.3 (2) | O4—C4—O3 | 122.5 (8) |
O4ii—Er—N | 76.3 (2) | O4—C4—C3 | 120.0 (7) |
O5iii—Er—N | 138.4 (2) | O3—C4—C3 | 117.4 (7) |
O6—Er—N | 70.2 (2) | N—C5—C6 | 113.2 (7) |
O7—Er—N | 121.3 (2) | N—C5—H5A | 108.9 |
C2—O1—Er | 125.9 (5) | C6—C5—H5A | 108.9 |
C2—O2—Eriv | 146.9 (6) | N—C5—H5B | 108.9 |
C4—O3—Er | 123.2 (5) | C6—C5—H5B | 108.9 |
C4—O4—Erv | 142.2 (6) | H5A—C5—H5B | 107.7 |
C6—O5—Ervi | 151.1 (6) | O5—C6—O6 | 122.2 (8) |
C6—O6—Er | 121.0 (5) | O5—C6—C5 | 120.8 (8) |
Er—O7—H7A | 109.5 | O6—C6—C5 | 117.0 (8) |
Symmetry codes: (i) x−1, y, z; (ii) −x+1/2, y−1/2, −z+1/2; (iii) x, y−1, z; (iv) x+1, y, z; (v) −x+1/2, y+1/2, −z+1/2; (vi) x, y+1, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O7—H7B···O2vii | 0.90 | 2.30 | 2.983 (8) | 133 |
O7—H7B···O5viii | 0.90 | 2.15 | 2.912 (9) | 142 |
O7—H7A···O6viii | 0.82 | 2.42 | 2.932 (9) | 122 |
Symmetry codes: (vii) −x+1, −y, −z; (viii) −x, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | [Er(C6H6NO6)(H2O)] |
Mr | 373.39 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 6.7262 (6), 6.5427 (4), 19.800 (2) |
β (°) | 93.444 (4) |
V (Å3) | 869.8 (1) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 9.67 |
Crystal size (mm) | 0.16 × 0.08 × 0.06 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Empirical (using intensity measurements) (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.328, 0.560 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2640, 1520, 1340 |
Rint | 0.033 |
(sin θ/λ)max (Å−1) | 0.596 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.032, 0.072, 1.09 |
No. of reflections | 1520 |
No. of parameters | 137 |
H-atom treatment | H-atom parameters constrained |
w = 1/[σ2(Fo2) + (0.0119P)2 + 12.9152P] where P = (Fo2 + 2Fc2)/3 | |
Δρmax, Δρmin (e Å−3) | 0.83, −1.04 |
Computer programs: SMART (Siemens, 1996), SMART and SAINT (Siemens, 1994), SMART and SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Siemens, 1994), SHELXL97.
Er—O1 | 2.336 (6) | Er—O5iii | 2.309 (6) |
Er—O2i | 2.359 (6) | Er—O6 | 2.312 (6) |
Er—O3 | 2.373 (6) | Er—O7 | 2.343 (6) |
Er—O4ii | 2.310 (6) | Er—N | 2.575 (7) |
O4ii—Er—O1 | 86.3 (2) | O5iii—Er—O4ii | 75.8 (2) |
O5iii—Er—O1 | 81.7 (2) | O4ii—Er—O6 | 139.2 (2) |
O6—Er—O1 | 100.3 (2) | O5iii—Er—O6 | 144.8 (2) |
O1—Er—O2i | 151.1 (2) | O1—Er—O7 | 78.7 (2) |
O4ii—Er—O2i | 105.4 (2) | O4ii—Er—O7 | 147.9 (2) |
O5iii—Er—O2i | 75.9 (2) | O5iii—Er—O7 | 74.1 (2) |
O6—Er—O2i | 88.1 (2) | O6—Er—O7 | 71.9 (2) |
O7—Er—O2i | 77.7 (2) | O1—Er—N | 66.2 (2) |
O1—Er—O3 | 130.5 (2) | O2i—Er—N | 141.8 (2) |
O2i—Er—O3 | 78.5 (2) | O3—Er—N | 65.3 (2) |
O4ii—Er—O3 | 73.2 (2) | O4ii—Er—N | 76.3 (2) |
O5iii—Er—O3 | 132.4 (2) | O5iii—Er—N | 138.4 (2) |
O6—Er—O3 | 72.1 (2) | O6—Er—N | 70.2 (2) |
O7—Er—O3 | 137.1 (2) | O7—Er—N | 121.3 (2) |
Symmetry codes: (i) x−1, y, z; (ii) −x+1/2, y−1/2, −z+1/2; (iii) x, y−1, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O7—H7B···O2iv | 0.90 | 2.30 | 2.983 (8) | 133 |
O7—H7B···O5v | 0.90 | 2.15 | 2.912 (9) | 142 |
O7—H7A···O6v | 0.82 | 2.42 | 2.932 (9) | 122 |
Symmetry codes: (iv) −x+1, −y, −z; (v) −x, −y+1, −z. |
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Owing to the enormous variety of intriguing structural topologies, much effort has been devoted to the research of novel coordination materials using multidentate organic ligands to coordinate to metal centres (Philp & Stoddard, 1996; Yaghi et al., 1998; Hagrman et al., 1999). The higher coordination numbers of lanthanide ions and the inherent flexibility of their coordination geometries might lead to some unprecedented topological architectures (Long et al., 2000, 2001; Pan et al., 2000). We are currently interested in pursuing synthetic strategies using lanthanide ions as nodes in the construction of polymeric frameworks. The nitrilotriacetate (NTA) ligand, which has six O atoms and one N atom as potential donors, is a rather versatile ligand for the synthesis of polymeric complexes containing lanthanide cations. To date, it is known that the NTA ligand may form at least three kinds of complexes with lanthanide elements, such as mononuclear cluster anions (Belyaeva et al., 1974; Starynowicz, 1987; Chen et al., 1989), polymeric complexes (Belyaeva et al., 1968; Martin & Jacobson, 1972a,b), and heterometallic polymers (Liu et al., 2000). As part of our investigations of polycarboxylic-acid-bridged new polymeric complexes, the title complex, Er[N(CH2COO)3](H2O), (I), was obtained as red crystals and its structure is presented here. \sch
Compound (I) has a two-dimensional framework that is built up by connecting the crystallographically unique ErIII atom with its neighbours through bridging NTA ligands. For each NTA ligand, the N atom and one of the two O atoms in each carboxylate group coordinate to the same ErIII atom. The remaining three carboxylate O atoms in each ligand coordinate to three adjacent symmetry-related ErIII atoms. Six acetate O atoms, one N atom and one water ligand form a distorted square-antiprismatic coordination sphere about each metal centre (Fig. 1). The Er—N distance is about 0.24 Å longer than the average length of the Er—O(carboxylate) bond. The latter bonds show little variation, due to the similar coordination mode of the carboxylate groups (Table 1). The length of the Er—O bond involving the water ligand is similar to the Er—O distances involving the carboxylate groups.
Each NTA ligand acts as a bridging ligand, connecting four ErIII ions into a two-dimensional structure (Fig. 2). The two-dimensional polymer of (I) could be described as a trilayer. As shown in Fig. 3, all of the C, H and N atoms are in the middle `layer', while the two covering `sheets' are eight-coordinated ErIII centres, with all of the water ligands oriented to the outside of the trilayer. Furthermore, all of these trilayers are linked together through weak hydrogen bonding between the water ligands and the carboxylate O atoms of the NTA ligands, thus producing a three-dimensional framework in which the mean O···O hydrogen-bonding distance is 2.942 (9) Å.
Compared with the previously reported three-dimensional polymeric complexes, [LnNTA(H2O)2] (Ln is Nd, Pr or Dy; Belyaeva et al., 1968; Martin & Jacobson, 1972a,b), the replacement of one water ligand by one NTA carboxylate O atom causes the structure of (I) to become a two-dimensional lamellar structure. The difference results from the different coordination mode of the NTA ligand in (I), which prevents it from making the additional connections required to build a three-dimensional framework. This also suggests that the products obtained under hydrothermal reaction conditions are quite different from those obtained from syntheses conducted at room temperature.