Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S160053680702733X/lh2410sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S160053680702733X/lh2410Isup2.hkl |
CCDC reference: 654902
Key indicators
- Single-crystal X-ray study
- T = 288 K
- Mean (C-C) = 0.004 Å
- R factor = 0.049
- wR factor = 0.114
- Data-to-parameter ratio = 14.5
checkCIF/PLATON results
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Alert level C PLAT066_ALERT_1_C Predicted and Reported Transmissions Identical . ?
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 1 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
For background information, see: Baik et al. (2003); Costa et al. (2004); Abu-Omar et al. (2005); Girerd et al. (2000).
To a stirred solution of 4,5-dichloro-1,2-phenylenediamine (0.92 g, 5 mmol) in THF (100 ml), a solution of triethylamine (2.10 ml, 15 mmol) was added dropwise. The solution was stirred for 15 min and benzoyl chloride (1.17 ml, 10 mmol) was slowly added. The reaction mixture was stirred for 4 h at room temperature. Then, the solution was evaporated to dryness. The powder was collected by filtration, washed with MeOH, and dried under vacuum oven for 1 h. Recrystallization from a methanol solution afforded an ivory powder. Colorless rod-type crystals were prepared from a DMSO-acetone solution at room temperature by slow evaporation for X-ray experiments.
H atoms were placed in calculated positions with C—H distances of 0.93 Å·They were included in the refinement in riding–motion approximation with Uiso(H) = 1.2Ueq(C). The H atoms bonded to N atoms were refined independently with isotropic displacement parameters
Dioxygen is activated by nonheme biological systems to carry out selective transformations of organic substrates (Baik et al., 2003). Key intermediates such as Fe(IV)-oxo and Fe(V)-oxo compounds have been identified or proposed in bleomycin, naphthalene dioxygenase, and Rieske dioxygenase (Costa et al., 2004, Abu-Omar et al. 2005). Considerable efforts have been devoted to prepare and characterize models of these intermediates. Amine/pyridine ligands have often been used and have allowed the identification of synthetic models of the intermediates (Costa et al., 2004, Girerd et al., 2000). In order to further develop functional models for mononuclear nonheme iron oxygenases, we synthesized a new N2–type bidentate ligand.
The asymmetric unit of (I) contains whole molecule in a monoclinic cell (space group P21/c) with Z = 4. The molecule is not planar, having large twisted angles between benzene ring (A) and phenyl rings (B and C) (Fig. 1). The dihedral angle between ring A and ring B is 58.92 (7)°, and the dihedral angle between ring A and ring C is 21.91 (9)°. There are intramolecular hydrogen bonds between an amide hydrogen atom and an amide oxygen atom (N1(amide)-H1N···O2(amide) 2.702 (3) A%), and between a phenyl hydrogen atom and amide oxygen atom (C5—H5···O1(amide) 2.769 (3) A%). There are also intermolecular hydrogen bonds between amide hydrogen atoms and amide oxygen atoms of neighboring molecules (N2(amide)-H2N···O1(amide) 2.976 (3) A%) with a N2—H2N···O1 angle of 165 (3)°. These intermolecular hydrogen bonds form a dimeric molecule as shown in Fig. 2.
For background information, see: Baik et al. (2003); Costa et al. (2004); Abu-Omar et al. (2005); Girerd et al. (2000).
Data collection: SMART (Bruker, 1997); cell refinement: SAINT (Bruker, 1997); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 1998); software used to prepare material for publication: SHELXTL.
C20H14Cl2N2O2 | F(000) = 792 |
Mr = 385.23 | Dx = 1.422 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 986 reflections |
a = 8.3024 (8) Å | θ = 2.2–18.8° |
b = 11.8571 (11) Å | µ = 0.38 mm−1 |
c = 18.7334 (18) Å | T = 288 K |
β = 102.630 (2)° | Rod, colorless |
V = 1799.5 (3) Å3 | 0.08 × 0.03 × 0.03 mm |
Z = 4 |
Bruker SMART CCD diffractometer | 3518 independent reflections |
Radiation source: fine-focus sealed tube | 1936 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.048 |
φ and ω scans | θmax = 26.0°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Bruker, 1997) | h = −10→9 |
Tmin = 0.986, Tmax = 0.989 | k = −14→14 |
9881 measured reflections | l = −19→23 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.114 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.00 | w = 1/[σ2(Fo2) + (0.0183P)2 + 0.2774P] where P = (Fo2 + 2Fc2)/3 |
3518 reflections | (Δ/σ)max = 0.001 |
243 parameters | Δρmax = 0.16 e Å−3 |
0 restraints | Δρmin = −0.19 e Å−3 |
C20H14Cl2N2O2 | V = 1799.5 (3) Å3 |
Mr = 385.23 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 8.3024 (8) Å | µ = 0.38 mm−1 |
b = 11.8571 (11) Å | T = 288 K |
c = 18.7334 (18) Å | 0.08 × 0.03 × 0.03 mm |
β = 102.630 (2)° |
Bruker SMART CCD diffractometer | 3518 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1997) | 1936 reflections with I > 2σ(I) |
Tmin = 0.986, Tmax = 0.989 | Rint = 0.048 |
9881 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | 0 restraints |
wR(F2) = 0.114 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.00 | Δρmax = 0.16 e Å−3 |
3518 reflections | Δρmin = −0.19 e Å−3 |
243 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.28862 (10) | 1.37684 (6) | 1.07001 (5) | 0.0748 (3) | |
Cl2 | 0.00258 (11) | 1.37867 (6) | 0.92701 (5) | 0.0839 (3) | |
N1 | 0.3210 (3) | 0.95030 (19) | 1.04178 (14) | 0.0450 (6) | |
H1N | 0.345 (3) | 0.906 (2) | 1.0091 (15) | 0.047 (8)* | |
N2 | 0.0736 (3) | 0.95613 (18) | 0.90593 (12) | 0.0415 (6) | |
H2N | −0.029 (4) | 0.962 (2) | 0.8863 (16) | 0.080 (11)* | |
O1 | 0.2756 (2) | 0.97875 (15) | 1.15499 (10) | 0.0522 (5) | |
O2 | 0.3166 (2) | 0.87012 (16) | 0.90634 (11) | 0.0608 (6) | |
C1 | 0.4721 (3) | 0.7357 (2) | 1.09042 (16) | 0.0566 (8) | |
H1 | 0.4859 | 0.7618 | 1.0453 | 0.068* | |
C2 | 0.5274 (4) | 0.6296 (2) | 1.11447 (19) | 0.0664 (9) | |
H2 | 0.5786 | 0.5845 | 1.0854 | 0.080* | |
C3 | 0.5076 (4) | 0.5901 (3) | 1.18068 (19) | 0.0642 (9) | |
H3 | 0.5452 | 0.5185 | 1.1963 | 0.077* | |
C4 | 0.4320 (4) | 0.6564 (3) | 1.22422 (17) | 0.0617 (8) | |
H4 | 0.4183 | 0.6300 | 1.2693 | 0.074* | |
C5 | 0.3768 (3) | 0.7627 (2) | 1.19999 (15) | 0.0550 (8) | |
H5 | 0.3258 | 0.8076 | 1.2293 | 0.066* | |
C6 | 0.3958 (3) | 0.8035 (2) | 1.13373 (14) | 0.0411 (6) | |
C7 | 0.3283 (3) | 0.9185 (2) | 1.11169 (15) | 0.0422 (7) | |
C8 | 0.2518 (3) | 1.0535 (2) | 1.01112 (14) | 0.0391 (6) | |
C9 | 0.2980 (3) | 1.1534 (2) | 1.04811 (15) | 0.0457 (7) | |
H9 | 0.3801 | 1.1528 | 1.0908 | 0.055* | |
C10 | 0.2238 (3) | 1.2540 (2) | 1.02250 (15) | 0.0481 (7) | |
C11 | 0.1031 (3) | 1.2557 (2) | 0.95916 (16) | 0.0487 (7) | |
C12 | 0.0627 (3) | 1.1572 (2) | 0.92025 (15) | 0.0461 (7) | |
H12 | −0.0140 | 1.1594 | 0.8759 | 0.055* | |
C13 | 0.1339 (3) | 1.0549 (2) | 0.94576 (14) | 0.0400 (6) | |
C14 | 0.1654 (3) | 0.8714 (2) | 0.88694 (14) | 0.0433 (7) | |
C15 | 0.0737 (3) | 0.7775 (2) | 0.84321 (14) | 0.0432 (7) | |
C16 | −0.0825 (3) | 0.7881 (2) | 0.79916 (15) | 0.0555 (8) | |
H16 | −0.1371 | 0.8570 | 0.7957 | 0.067* | |
C17 | −0.1572 (4) | 0.6964 (3) | 0.76037 (17) | 0.0688 (9) | |
H17 | −0.2616 | 0.7043 | 0.7302 | 0.083* | |
C18 | −0.0799 (4) | 0.5938 (3) | 0.76558 (18) | 0.0667 (9) | |
H18 | −0.1325 | 0.5320 | 0.7400 | 0.080* | |
C19 | 0.0747 (4) | 0.5828 (3) | 0.80849 (19) | 0.0678 (9) | |
H19 | 0.1280 | 0.5134 | 0.8118 | 0.081* | |
C20 | 0.1520 (4) | 0.6736 (2) | 0.84674 (16) | 0.0588 (8) | |
H20 | 0.2580 | 0.6654 | 0.8753 | 0.071* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0886 (6) | 0.0492 (5) | 0.0825 (7) | −0.0102 (4) | 0.0100 (5) | −0.0145 (4) |
Cl2 | 0.0950 (7) | 0.0447 (5) | 0.1010 (8) | 0.0163 (4) | −0.0021 (5) | 0.0086 (4) |
N1 | 0.0476 (13) | 0.0463 (14) | 0.0398 (15) | 0.0096 (11) | 0.0062 (11) | −0.0015 (12) |
N2 | 0.0345 (13) | 0.0432 (14) | 0.0456 (14) | 0.0054 (11) | 0.0061 (11) | −0.0046 (10) |
O1 | 0.0583 (12) | 0.0532 (12) | 0.0451 (12) | 0.0122 (10) | 0.0113 (9) | −0.0043 (9) |
O2 | 0.0371 (11) | 0.0836 (15) | 0.0612 (14) | 0.0104 (10) | 0.0098 (9) | −0.0184 (11) |
C1 | 0.0627 (19) | 0.0547 (19) | 0.055 (2) | 0.0142 (15) | 0.0176 (15) | 0.0111 (15) |
C2 | 0.075 (2) | 0.0536 (19) | 0.072 (2) | 0.0180 (16) | 0.0178 (18) | −0.0005 (17) |
C3 | 0.065 (2) | 0.0484 (19) | 0.075 (3) | 0.0049 (16) | 0.0065 (18) | 0.0147 (17) |
C4 | 0.064 (2) | 0.065 (2) | 0.053 (2) | 0.0011 (17) | 0.0072 (16) | 0.0160 (16) |
C5 | 0.0531 (18) | 0.064 (2) | 0.0459 (19) | 0.0053 (15) | 0.0075 (14) | 0.0056 (15) |
C6 | 0.0344 (14) | 0.0453 (16) | 0.0415 (17) | 0.0027 (12) | 0.0040 (12) | −0.0013 (13) |
C7 | 0.0342 (14) | 0.0461 (16) | 0.0429 (19) | 0.0006 (12) | 0.0011 (12) | −0.0009 (13) |
C8 | 0.0357 (14) | 0.0394 (16) | 0.0436 (16) | 0.0043 (12) | 0.0116 (12) | 0.0015 (12) |
C9 | 0.0382 (15) | 0.0507 (18) | 0.0468 (17) | −0.0040 (13) | 0.0064 (12) | −0.0026 (13) |
C10 | 0.0486 (16) | 0.0390 (16) | 0.058 (2) | −0.0072 (13) | 0.0152 (14) | −0.0034 (13) |
C11 | 0.0479 (16) | 0.0378 (16) | 0.061 (2) | 0.0049 (13) | 0.0126 (14) | 0.0054 (14) |
C12 | 0.0410 (15) | 0.0490 (18) | 0.0465 (18) | 0.0026 (13) | 0.0058 (12) | 0.0087 (13) |
C13 | 0.0343 (14) | 0.0406 (16) | 0.0463 (17) | −0.0003 (12) | 0.0115 (12) | 0.0020 (13) |
C14 | 0.0414 (17) | 0.0494 (17) | 0.0402 (17) | 0.0047 (14) | 0.0113 (13) | 0.0040 (13) |
C15 | 0.0462 (15) | 0.0437 (16) | 0.0420 (17) | 0.0087 (13) | 0.0145 (13) | 0.0000 (13) |
C16 | 0.0533 (17) | 0.0503 (18) | 0.059 (2) | 0.0106 (14) | 0.0044 (15) | −0.0095 (15) |
C17 | 0.0600 (19) | 0.074 (2) | 0.068 (2) | 0.0023 (18) | 0.0029 (16) | −0.0243 (18) |
C18 | 0.080 (2) | 0.054 (2) | 0.072 (2) | −0.0077 (18) | 0.0290 (19) | −0.0220 (17) |
C19 | 0.086 (2) | 0.0473 (19) | 0.076 (2) | 0.0143 (18) | 0.0301 (19) | −0.0018 (17) |
C20 | 0.0610 (19) | 0.0539 (19) | 0.062 (2) | 0.0148 (16) | 0.0133 (15) | 0.0027 (16) |
Cl1—C10 | 1.731 (3) | C6—C7 | 1.498 (3) |
Cl2—C11 | 1.722 (3) | C8—C9 | 1.384 (3) |
N1—C7 | 1.351 (3) | C8—C13 | 1.391 (3) |
N1—C8 | 1.418 (3) | C9—C10 | 1.379 (3) |
N1—H1N | 0.87 (3) | C9—H9 | 0.9300 |
N2—C14 | 1.355 (3) | C10—C11 | 1.376 (4) |
N2—C13 | 1.419 (3) | C11—C12 | 1.379 (3) |
N2—H2N | 0.85 (3) | C12—C13 | 1.388 (3) |
O1—C7 | 1.231 (3) | C12—H12 | 0.9300 |
O2—C14 | 1.228 (3) | C14—C15 | 1.489 (3) |
C1—C2 | 1.381 (4) | C15—C16 | 1.382 (3) |
C1—C6 | 1.389 (4) | C15—C20 | 1.388 (3) |
C1—H1 | 0.9300 | C16—C17 | 1.377 (4) |
C2—C3 | 1.369 (4) | C16—H16 | 0.9300 |
C2—H2 | 0.9300 | C17—C18 | 1.369 (4) |
C3—C4 | 1.379 (4) | C17—H17 | 0.9300 |
C3—H3 | 0.9300 | C18—C19 | 1.364 (4) |
C4—C5 | 1.383 (4) | C18—H18 | 0.9300 |
C4—H4 | 0.9300 | C19—C20 | 1.372 (4) |
C5—C6 | 1.373 (3) | C19—H19 | 0.9300 |
C5—H5 | 0.9300 | C20—H20 | 0.9300 |
C7—N1—C8 | 124.2 (2) | C11—C10—C9 | 119.9 (2) |
C7—N1—H1N | 123.0 (17) | C11—C10—Cl1 | 121.1 (2) |
C8—N1—H1N | 112.3 (17) | C9—C10—Cl1 | 118.9 (2) |
C14—N2—C13 | 126.5 (2) | C10—C11—C12 | 119.4 (2) |
C14—N2—H2N | 121 (2) | C10—C11—Cl2 | 121.3 (2) |
C13—N2—H2N | 112 (2) | C12—C11—Cl2 | 119.3 (2) |
C2—C1—C6 | 119.9 (3) | C11—C12—C13 | 121.5 (2) |
C2—C1—H1 | 120.1 | C11—C12—H12 | 119.3 |
C6—C1—H1 | 120.1 | C13—C12—H12 | 119.3 |
C3—C2—C1 | 120.7 (3) | C12—C13—C8 | 118.6 (2) |
C3—C2—H2 | 119.7 | C12—C13—N2 | 117.7 (2) |
C1—C2—H2 | 119.7 | C8—C13—N2 | 123.5 (2) |
C2—C3—C4 | 120.1 (3) | O2—C14—N2 | 121.9 (2) |
C2—C3—H3 | 120.0 | O2—C14—C15 | 121.3 (2) |
C4—C3—H3 | 120.0 | N2—C14—C15 | 116.7 (2) |
C3—C4—C5 | 119.1 (3) | C16—C15—C20 | 118.5 (3) |
C3—C4—H4 | 120.5 | C16—C15—C14 | 124.1 (2) |
C5—C4—H4 | 120.5 | C20—C15—C14 | 117.4 (2) |
C6—C5—C4 | 121.5 (3) | C17—C16—C15 | 120.0 (3) |
C6—C5—H5 | 119.3 | C17—C16—H16 | 120.0 |
C4—C5—H5 | 119.3 | C15—C16—H16 | 120.0 |
C5—C6—C1 | 118.8 (3) | C18—C17—C16 | 120.9 (3) |
C5—C6—C7 | 117.4 (2) | C18—C17—H17 | 119.5 |
C1—C6—C7 | 123.8 (3) | C16—C17—H17 | 119.5 |
O1—C7—N1 | 121.9 (2) | C19—C18—C17 | 119.5 (3) |
O1—C7—C6 | 120.8 (3) | C19—C18—H18 | 120.2 |
N1—C7—C6 | 117.2 (2) | C17—C18—H18 | 120.2 |
C9—C8—C13 | 119.7 (2) | C18—C19—C20 | 120.4 (3) |
C9—C8—N1 | 119.5 (2) | C18—C19—H19 | 119.8 |
C13—C8—N1 | 120.8 (2) | C20—C19—H19 | 119.8 |
C10—C9—C8 | 120.8 (2) | C19—C20—C15 | 120.7 (3) |
C10—C9—H9 | 119.6 | C19—C20—H20 | 119.6 |
C8—C9—H9 | 119.6 | C15—C20—H20 | 119.6 |
C6—C1—C2—C3 | 0.1 (5) | C10—C11—C12—C13 | 3.9 (4) |
C1—C2—C3—C4 | −0.1 (5) | Cl2—C11—C12—C13 | −176.6 (2) |
C2—C3—C4—C5 | 0.0 (5) | C11—C12—C13—C8 | −1.8 (4) |
C3—C4—C5—C6 | 0.0 (4) | C11—C12—C13—N2 | 174.0 (2) |
C4—C5—C6—C1 | 0.0 (4) | C9—C8—C13—C12 | −1.5 (4) |
C4—C5—C6—C7 | 178.6 (2) | N1—C8—C13—C12 | 176.2 (2) |
C2—C1—C6—C5 | −0.1 (4) | C9—C8—C13—N2 | −177.0 (2) |
C2—C1—C6—C7 | −178.6 (2) | N1—C8—C13—N2 | 0.7 (4) |
C8—N1—C7—O1 | −0.7 (4) | C14—N2—C13—C12 | 134.9 (3) |
C8—N1—C7—C6 | 176.2 (2) | C14—N2—C13—C8 | −49.5 (4) |
C5—C6—C7—O1 | 8.2 (4) | C13—N2—C14—O2 | 3.5 (4) |
C1—C6—C7—O1 | −173.3 (3) | C13—N2—C14—C15 | −178.4 (2) |
C5—C6—C7—N1 | −168.7 (2) | O2—C14—C15—C16 | −157.0 (3) |
C1—C6—C7—N1 | 9.8 (4) | N2—C14—C15—C16 | 24.9 (4) |
C7—N1—C8—C9 | 49.1 (4) | O2—C14—C15—C20 | 22.3 (4) |
C7—N1—C8—C13 | −128.6 (3) | N2—C14—C15—C20 | −155.8 (2) |
C13—C8—C9—C10 | 2.6 (4) | C20—C15—C16—C17 | 0.4 (4) |
N1—C8—C9—C10 | −175.1 (2) | C14—C15—C16—C17 | 179.7 (3) |
C8—C9—C10—C11 | −0.5 (4) | C15—C16—C17—C18 | 1.0 (5) |
C8—C9—C10—Cl1 | −178.9 (2) | C16—C17—C18—C19 | −1.5 (5) |
C9—C10—C11—C12 | −2.8 (4) | C17—C18—C19—C20 | 0.6 (5) |
Cl1—C10—C11—C12 | 175.6 (2) | C18—C19—C20—C15 | 0.8 (5) |
C9—C10—C11—Cl2 | 177.8 (2) | C16—C15—C20—C19 | −1.3 (4) |
Cl1—C10—C11—Cl2 | −3.8 (4) | C14—C15—C20—C19 | 179.4 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2N···O1i | 0.85 (3) | 2.15 (3) | 2.976 (3) | 165 (3) |
C5—H5···O1 | 0.93 | 2.44 | 2.769 (3) | 101 |
N1—H1N···O2 | 0.87 (3) | 1.93 (3) | 2.702 (3) | 147 (2) |
Symmetry code: (i) −x, −y+2, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C20H14Cl2N2O2 |
Mr | 385.23 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 288 |
a, b, c (Å) | 8.3024 (8), 11.8571 (11), 18.7334 (18) |
β (°) | 102.630 (2) |
V (Å3) | 1799.5 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.38 |
Crystal size (mm) | 0.08 × 0.03 × 0.03 |
Data collection | |
Diffractometer | Bruker SMART CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 1997) |
Tmin, Tmax | 0.986, 0.989 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9881, 3518, 1936 |
Rint | 0.048 |
(sin θ/λ)max (Å−1) | 0.616 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.114, 1.00 |
No. of reflections | 3518 |
No. of parameters | 243 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.16, −0.19 |
Computer programs: SMART (Bruker, 1997), SAINT (Bruker, 1997), SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 1998), SHELXTL.
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2N···O1i | 0.85 (3) | 2.15 (3) | 2.976 (3) | 165 (3) |
C5—H5···O1 | 0.93 | 2.44 | 2.769 (3) | 100.5 |
N1—H1N···O2 | 0.87 (3) | 1.93 (3) | 2.702 (3) | 147 (2) |
Symmetry code: (i) −x, −y+2, −z+2. |
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Dioxygen is activated by nonheme biological systems to carry out selective transformations of organic substrates (Baik et al., 2003). Key intermediates such as Fe(IV)-oxo and Fe(V)-oxo compounds have been identified or proposed in bleomycin, naphthalene dioxygenase, and Rieske dioxygenase (Costa et al., 2004, Abu-Omar et al. 2005). Considerable efforts have been devoted to prepare and characterize models of these intermediates. Amine/pyridine ligands have often been used and have allowed the identification of synthetic models of the intermediates (Costa et al., 2004, Girerd et al., 2000). In order to further develop functional models for mononuclear nonheme iron oxygenases, we synthesized a new N2–type bidentate ligand.
The asymmetric unit of (I) contains whole molecule in a monoclinic cell (space group P21/c) with Z = 4. The molecule is not planar, having large twisted angles between benzene ring (A) and phenyl rings (B and C) (Fig. 1). The dihedral angle between ring A and ring B is 58.92 (7)°, and the dihedral angle between ring A and ring C is 21.91 (9)°. There are intramolecular hydrogen bonds between an amide hydrogen atom and an amide oxygen atom (N1(amide)-H1N···O2(amide) 2.702 (3) A%), and between a phenyl hydrogen atom and amide oxygen atom (C5—H5···O1(amide) 2.769 (3) A%). There are also intermolecular hydrogen bonds between amide hydrogen atoms and amide oxygen atoms of neighboring molecules (N2(amide)-H2N···O1(amide) 2.976 (3) A%) with a N2—H2N···O1 angle of 165 (3)°. These intermolecular hydrogen bonds form a dimeric molecule as shown in Fig. 2.