Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807027353/lh2396sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807027353/lh2396Isup2.hkl |
CCDC reference: 654975
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.001 Å
- R factor = 0.040
- wR factor = 0.108
- Data-to-parameter ratio = 48.8
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT180_ALERT_3_C Check Cell Rounding: # of Values Ending with 0 = 3 PLAT431_ALERT_2_C Short Inter HL..A Contact Cl2 .. O4 .. 3.02 Ang.
Alert level G PLAT793_ALERT_1_G Check the Absolute Configuration of C14 = ... R
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 2 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
For related literature on hydrogen-bond motifs, see: Bernstein et al. (1995). For related literature on values of bond lengths and angles, see: Allen et al. (1987). For related structures, see: Al-Douh et al. (2006a,b); Begley et al. (1978); Gill et al. (1979).
The title compound (I) was synthesized by adding sulfonyl chloride (535 mg, 3.027 mmol) dropwise to a stirred solution of 2-(2-(benzyloxy)-3-methoxyphenyl)-1H-benzimidazole (1000 mg, 3.027 mmol) in dry dichloromethane (50 ml) and dimethylaminopyridine (370 mg, 3.027 mmol). The resulting solution was stirred at room temperature for 2 hr, then at 320 K for 10 hr. Then, it was cooled to room temperature before removing the solvent by rotary evaporator. Crushed ice (25 g) and CHCl3 (50 ml) were added to the crude solution. The solution was shaken using separatory funnel and the organic layer was collected. The resulting solution was washed with 10% NaOH (3 × 25 ml) followed by water (3 × 25 ml), brine (3 × 25 ml) and water (3 × 25 ml) again. The organic layer was dried over MgSO4, filtered and the solvent was removed by rotary evaporator. The crude product was then purified by column chromatography with n-hexane:diethyl ether (1:4). The final product was dissolved in petroleum ether, and single crystals suitable for X-ray diffraction were obtained by evaporation the solvent at room temperature.
H atoms were placed in calculated positions and constrained to ride on their carrier atoms, with C—H distances in the range 0.93 - 0.98 Å. The Uiso values were constrained to be 1.5 Ueq of the carrier atom for methyl H atoms and 1.2 Ueq for the remaining H atoms.
In our attempt to synthesize new benzimidazole derivatives (Al-Douh et al., 2006a,b), the crystal structure of the title compound, (I), was obtained and determined (Figure 1). Previously, the structure of a 2,2,2-trichloroethyl tosylsulfonate as a functional group has only been determined as an (S) derivative in tosylate (Begley et al., 1978) and as enantiomers in sulfonates (Gill et al., 1979). The research on the physical and chemical properties, including the reaction of the title compound to synthesize biologically important compounds is in progress. We present herein its crystal structure.
The bond lengths and angles in (I) have normal values (Allen et al., 1987) and are comparable with those in the related structures (Begley et al., 1978). The dihedral angle between the benzene rings [(C1—C6) and (C8—C13)] is 22.64 (5)° whereas the torsion angle of C8—O1—C7—C6 is -157.96 (7)°. The methoxy group at C9 is slightly twisted from the plane of the attached benzene ring with torsion angle of C22—O2—C9—C10 = -18.96 (14)°.
The intramolecular C7—H7B···O2 interaction generates an S(6) ring motif, while intramolecular C14—H14A···O1, C14—H14A···O3 and C21—H21A···O3 interaction (Table 1 and Figure 1) generate S(5) ring motifs (Bernstein et al., 1995). In the crystal structure, the molecules are linked by short inter Cl2···O4 ii contact of 3.0170 (8) Å (symmetry code: (ii) -x, -y, -z) into cyclic centrosymmetric R22(12) dimers. These dimers are interlinked by the C3—H3A···O2i (symmetry code: (i) -x, y + 1/2, -z + 1/2) intermolecular interactions.
For related literature on hydrogen-bond motifs, see: Bernstein et al. (1995). For related literature on values of bond lengths and angles, see: Allen et al. (1987). For related structures, see: Al-Douh et al. (2006a,b); Begley et al. (1978); Gill et al. (1979).
Data collection: APEX2 (Bruker, 2005); cell refinement: SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 1998); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003).
C22H19Cl3O5S | F(000) = 1032 |
Mr = 501.78 | Dx = 1.501 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 6905 reflections |
a = 8.1638 (1) Å | θ = 1.3–40.0° |
b = 8.8536 (1) Å | µ = 0.54 mm−1 |
c = 30.7221 (5) Å | T = 100 K |
β = 90.670 (1)° | Block, brown |
V = 2220.41 (5) Å3 | 0.48 × 0.30 × 0.29 mm |
Z = 4 |
Bruker SMART APEX II CCD area-detector diffractometer | 13669 independent reflections |
Radiation source: fine-focus sealed tube | 11428 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.059 |
Detector resolution: 8.33 pixels mm-1 | θmax = 40.0°, θmin = 1.3° |
ω scans | h = −14→14 |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −16→16 |
Tmin = 0.779, Tmax = 0.858 | l = −54→54 |
122837 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.108 | H-atom parameters constrained |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0515P)2 + 0.5813P] where P = (Fo2 + 2Fc2)/3 |
13669 reflections | (Δ/σ)max < 0.001 |
280 parameters | Δρmax = 0.57 e Å−3 |
0 restraints | Δρmin = −0.55 e Å−3 |
C22H19Cl3O5S | V = 2220.41 (5) Å3 |
Mr = 501.78 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 8.1638 (1) Å | µ = 0.54 mm−1 |
b = 8.8536 (1) Å | T = 100 K |
c = 30.7221 (5) Å | 0.48 × 0.30 × 0.29 mm |
β = 90.670 (1)° |
Bruker SMART APEX II CCD area-detector diffractometer | 13669 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 11428 reflections with I > 2σ(I) |
Tmin = 0.779, Tmax = 0.858 | Rint = 0.059 |
122837 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | 0 restraints |
wR(F2) = 0.108 | H-atom parameters constrained |
S = 1.08 | Δρmax = 0.57 e Å−3 |
13669 reflections | Δρmin = −0.55 e Å−3 |
280 parameters |
Experimental. The data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.11494 (3) | −0.07303 (2) | 0.165654 (7) | 0.01782 (4) | |
Cl2 | 0.00495 (3) | −0.10166 (3) | 0.076490 (8) | 0.02106 (5) | |
Cl3 | 0.31730 (3) | −0.22595 (2) | 0.103131 (9) | 0.02324 (5) | |
S1 | 0.29746 (3) | 0.21264 (2) | 0.024940 (7) | 0.01523 (4) | |
O1 | 0.22120 (8) | 0.28423 (7) | 0.17014 (2) | 0.01422 (10) | |
O2 | 0.46726 (9) | 0.36777 (8) | 0.22307 (2) | 0.01929 (12) | |
O3 | 0.17049 (9) | 0.30958 (8) | 0.04024 (3) | 0.02068 (13) | |
O4 | 0.28924 (10) | 0.14939 (9) | −0.01775 (2) | 0.02280 (14) | |
O5 | 0.30691 (8) | 0.06705 (7) | 0.05561 (2) | 0.01599 (11) | |
C1 | −0.07517 (13) | 0.55311 (13) | 0.15528 (4) | 0.02359 (18) | |
H1A | −0.0895 | 0.5219 | 0.1266 | 0.028* | |
C2 | −0.19809 (13) | 0.63606 (15) | 0.17555 (4) | 0.0284 (2) | |
H2A | −0.2939 | 0.6600 | 0.1604 | 0.034* | |
C3 | −0.17691 (13) | 0.68252 (12) | 0.21830 (4) | 0.02419 (18) | |
H3A | −0.2575 | 0.7397 | 0.2317 | 0.029* | |
C4 | −0.03532 (12) | 0.64364 (11) | 0.24112 (3) | 0.02053 (15) | |
H4A | −0.0221 | 0.6733 | 0.2700 | 0.025* | |
C5 | 0.08666 (12) | 0.56058 (10) | 0.22100 (3) | 0.01755 (14) | |
H5A | 0.1808 | 0.5340 | 0.2365 | 0.021* | |
C6 | 0.06841 (11) | 0.51685 (9) | 0.17762 (3) | 0.01539 (13) | |
C7 | 0.20611 (11) | 0.43904 (9) | 0.15479 (3) | 0.01698 (14) | |
H7A | 0.1853 | 0.4394 | 0.1236 | 0.020* | |
H7B | 0.3077 | 0.4928 | 0.1604 | 0.020* | |
C8 | 0.37519 (10) | 0.22610 (9) | 0.16305 (3) | 0.01354 (12) | |
C9 | 0.50575 (11) | 0.26899 (10) | 0.19070 (3) | 0.01604 (13) | |
C10 | 0.66156 (11) | 0.21106 (12) | 0.18355 (3) | 0.02081 (16) | |
H10A | 0.7487 | 0.2396 | 0.2015 | 0.025* | |
C11 | 0.68675 (12) | 0.11023 (13) | 0.14943 (4) | 0.02258 (17) | |
H11A | 0.7913 | 0.0725 | 0.1446 | 0.027* | |
C12 | 0.55826 (11) | 0.06541 (11) | 0.12253 (3) | 0.01892 (15) | |
H12A | 0.5765 | −0.0024 | 0.1000 | 0.023* | |
C13 | 0.40090 (10) | 0.12277 (9) | 0.12947 (3) | 0.01413 (12) | |
C14 | 0.25789 (10) | 0.07970 (9) | 0.10057 (3) | 0.01380 (12) | |
H14A | 0.1740 | 0.1585 | 0.1027 | 0.017* | |
C15 | 0.17828 (11) | −0.07436 (9) | 0.11099 (3) | 0.01580 (13) | |
C16 | 0.48763 (10) | 0.30045 (10) | 0.03280 (3) | 0.01484 (12) | |
C17 | 0.62592 (12) | 0.23099 (11) | 0.01579 (3) | 0.02071 (16) | |
H17A | 0.6174 | 0.1392 | 0.0012 | 0.025* | |
C18 | 0.77654 (12) | 0.30144 (14) | 0.02105 (4) | 0.02500 (19) | |
H18A | 0.8705 | 0.2563 | 0.0102 | 0.030* | |
C19 | 0.78741 (12) | 0.43929 (13) | 0.04253 (3) | 0.02332 (18) | |
H19A | 0.8886 | 0.4867 | 0.0456 | 0.028* | |
C20 | 0.64852 (13) | 0.50693 (11) | 0.05949 (3) | 0.02105 (16) | |
H20A | 0.6572 | 0.5987 | 0.0741 | 0.025* | |
C21 | 0.49626 (11) | 0.43739 (10) | 0.05464 (3) | 0.01730 (14) | |
H21A | 0.4025 | 0.4818 | 0.0658 | 0.021* | |
C22 | 0.58060 (14) | 0.37768 (13) | 0.25894 (4) | 0.02435 (18) | |
H22D | 0.5348 | 0.4396 | 0.2814 | 0.037* | |
H22A | 0.6812 | 0.4217 | 0.2492 | 0.037* | |
H22B | 0.6017 | 0.2784 | 0.2702 | 0.037* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.01973 (9) | 0.02031 (9) | 0.01344 (8) | −0.00148 (6) | 0.00140 (6) | 0.00146 (6) |
Cl2 | 0.02243 (9) | 0.02403 (10) | 0.01665 (9) | −0.00575 (7) | −0.00262 (7) | −0.00215 (7) |
Cl3 | 0.02823 (11) | 0.01416 (8) | 0.02746 (12) | 0.00426 (7) | 0.00600 (8) | 0.00013 (7) |
S1 | 0.01562 (8) | 0.01714 (8) | 0.01288 (8) | −0.00106 (6) | −0.00157 (6) | 0.00127 (6) |
O1 | 0.0144 (2) | 0.0128 (2) | 0.0155 (3) | 0.00084 (18) | 0.00208 (19) | 0.00006 (18) |
O2 | 0.0198 (3) | 0.0225 (3) | 0.0155 (3) | −0.0023 (2) | −0.0018 (2) | −0.0046 (2) |
O3 | 0.0156 (3) | 0.0211 (3) | 0.0253 (3) | 0.0028 (2) | 0.0002 (2) | 0.0051 (2) |
O4 | 0.0285 (3) | 0.0269 (3) | 0.0130 (3) | −0.0073 (3) | −0.0038 (2) | 0.0000 (2) |
O5 | 0.0213 (3) | 0.0150 (2) | 0.0118 (2) | 0.0006 (2) | 0.0021 (2) | −0.00034 (19) |
C1 | 0.0204 (4) | 0.0302 (4) | 0.0200 (4) | 0.0046 (3) | −0.0034 (3) | −0.0051 (3) |
C2 | 0.0185 (4) | 0.0368 (5) | 0.0298 (5) | 0.0079 (4) | −0.0020 (3) | −0.0040 (4) |
C3 | 0.0205 (4) | 0.0255 (4) | 0.0267 (5) | 0.0044 (3) | 0.0071 (3) | −0.0024 (4) |
C4 | 0.0240 (4) | 0.0204 (4) | 0.0173 (4) | 0.0002 (3) | 0.0061 (3) | −0.0024 (3) |
C5 | 0.0201 (3) | 0.0179 (3) | 0.0147 (3) | 0.0018 (3) | 0.0014 (3) | −0.0003 (3) |
C6 | 0.0171 (3) | 0.0142 (3) | 0.0149 (3) | 0.0011 (2) | 0.0014 (2) | −0.0009 (2) |
C7 | 0.0208 (3) | 0.0141 (3) | 0.0162 (3) | 0.0024 (2) | 0.0039 (3) | 0.0014 (2) |
C8 | 0.0134 (3) | 0.0141 (3) | 0.0131 (3) | 0.0005 (2) | 0.0010 (2) | 0.0001 (2) |
C9 | 0.0160 (3) | 0.0177 (3) | 0.0144 (3) | −0.0020 (2) | −0.0002 (2) | −0.0002 (3) |
C10 | 0.0149 (3) | 0.0277 (4) | 0.0198 (4) | −0.0006 (3) | −0.0018 (3) | −0.0005 (3) |
C11 | 0.0149 (3) | 0.0304 (4) | 0.0224 (4) | 0.0045 (3) | 0.0002 (3) | −0.0013 (3) |
C12 | 0.0164 (3) | 0.0225 (4) | 0.0179 (4) | 0.0045 (3) | 0.0014 (3) | −0.0017 (3) |
C13 | 0.0140 (3) | 0.0151 (3) | 0.0132 (3) | 0.0012 (2) | 0.0005 (2) | −0.0001 (2) |
C14 | 0.0157 (3) | 0.0137 (3) | 0.0119 (3) | 0.0009 (2) | 0.0006 (2) | −0.0005 (2) |
C15 | 0.0180 (3) | 0.0150 (3) | 0.0144 (3) | 0.0001 (2) | 0.0008 (2) | −0.0006 (2) |
C16 | 0.0151 (3) | 0.0166 (3) | 0.0129 (3) | 0.0003 (2) | 0.0003 (2) | −0.0002 (2) |
C17 | 0.0181 (3) | 0.0229 (4) | 0.0211 (4) | 0.0028 (3) | 0.0017 (3) | −0.0050 (3) |
C18 | 0.0159 (4) | 0.0355 (5) | 0.0237 (5) | 0.0022 (3) | 0.0019 (3) | −0.0039 (4) |
C19 | 0.0180 (4) | 0.0332 (5) | 0.0188 (4) | −0.0057 (3) | −0.0016 (3) | 0.0005 (3) |
C20 | 0.0234 (4) | 0.0220 (4) | 0.0177 (4) | −0.0050 (3) | −0.0010 (3) | −0.0021 (3) |
C21 | 0.0184 (3) | 0.0173 (3) | 0.0162 (3) | 0.0000 (3) | 0.0012 (3) | −0.0017 (3) |
C22 | 0.0254 (4) | 0.0290 (4) | 0.0186 (4) | −0.0060 (3) | −0.0055 (3) | −0.0040 (3) |
Cl1—C15 | 1.7631 (9) | C8—C13 | 1.3964 (12) |
Cl2—C15 | 1.7745 (9) | C8—C9 | 1.4074 (12) |
Cl3—C15 | 1.7759 (9) | C9—C10 | 1.3913 (13) |
S1—O4 | 1.4270 (8) | C10—C11 | 1.3940 (15) |
S1—O3 | 1.4295 (8) | C10—H10A | 0.9300 |
S1—O5 | 1.5981 (7) | C11—C12 | 1.3857 (14) |
S1—C16 | 1.7505 (9) | C11—H11A | 0.9300 |
O1—C8 | 1.3781 (10) | C12—C13 | 1.4001 (12) |
O1—C7 | 1.4541 (10) | C12—H12A | 0.9300 |
O2—C9 | 1.3638 (11) | C13—C14 | 1.5075 (12) |
O2—C22 | 1.4333 (12) | C14—C15 | 1.5460 (12) |
O5—C14 | 1.4469 (11) | C14—H14A | 0.9800 |
C1—C6 | 1.3890 (13) | C16—C21 | 1.3871 (12) |
C1—C2 | 1.3961 (15) | C16—C17 | 1.3928 (13) |
C1—H1A | 0.9300 | C17—C18 | 1.3866 (15) |
C2—C3 | 1.3851 (17) | C17—H17A | 0.9300 |
C2—H2A | 0.9300 | C18—C19 | 1.3897 (16) |
C3—C4 | 1.3882 (16) | C18—H18A | 0.9300 |
C3—H3A | 0.9300 | C19—C20 | 1.3891 (15) |
C4—C5 | 1.3887 (13) | C19—H19A | 0.9300 |
C4—H4A | 0.9300 | C20—C21 | 1.3936 (13) |
C5—C6 | 1.3942 (13) | C20—H20A | 0.9300 |
C5—H5A | 0.9300 | C21—H21A | 0.9300 |
C6—C7 | 1.4996 (12) | C22—H22D | 0.9600 |
C7—H7A | 0.9700 | C22—H22A | 0.9600 |
C7—H7B | 0.9700 | C22—H22B | 0.9600 |
O4—S1—O3 | 120.76 (5) | C10—C11—H11A | 119.5 |
O4—S1—O5 | 103.11 (4) | C11—C12—C13 | 119.66 (9) |
O3—S1—O5 | 108.70 (4) | C11—C12—H12A | 120.2 |
O4—S1—C16 | 109.46 (4) | C13—C12—H12A | 120.2 |
O3—S1—C16 | 109.47 (4) | C8—C13—C12 | 119.76 (8) |
O5—S1—C16 | 103.90 (4) | C8—C13—C14 | 118.60 (7) |
C8—O1—C7 | 112.01 (7) | C12—C13—C14 | 121.61 (8) |
C9—O2—C22 | 116.60 (8) | O5—C14—C13 | 111.16 (7) |
C14—O5—S1 | 119.24 (5) | O5—C14—C15 | 104.53 (6) |
C6—C1—C2 | 120.53 (10) | C13—C14—C15 | 115.20 (7) |
C6—C1—H1A | 119.7 | O5—C14—H14A | 108.6 |
C2—C1—H1A | 119.7 | C13—C14—H14A | 108.6 |
C3—C2—C1 | 119.79 (10) | C15—C14—H14A | 108.6 |
C3—C2—H2A | 120.1 | C14—C15—Cl1 | 108.66 (6) |
C1—C2—H2A | 120.1 | C14—C15—Cl2 | 109.32 (6) |
C2—C3—C4 | 119.94 (9) | Cl1—C15—Cl2 | 109.21 (5) |
C2—C3—H3A | 120.0 | C14—C15—Cl3 | 111.58 (6) |
C4—C3—H3A | 120.0 | Cl1—C15—Cl3 | 109.24 (5) |
C3—C4—C5 | 120.25 (9) | Cl2—C15—Cl3 | 108.80 (5) |
C3—C4—H4A | 119.9 | C21—C16—C17 | 122.05 (8) |
C5—C4—H4A | 119.9 | C21—C16—S1 | 119.66 (7) |
C4—C5—C6 | 120.21 (9) | C17—C16—S1 | 118.27 (7) |
C4—C5—H5A | 119.9 | C18—C17—C16 | 118.63 (9) |
C6—C5—H5A | 119.9 | C18—C17—H17A | 120.7 |
C1—C6—C5 | 119.23 (8) | C16—C17—H17A | 120.7 |
C1—C6—C7 | 120.53 (8) | C17—C18—C19 | 120.14 (9) |
C5—C6—C7 | 120.16 (8) | C17—C18—H18A | 119.9 |
O1—C7—C6 | 110.03 (7) | C19—C18—H18A | 119.9 |
O1—C7—H7A | 109.7 | C20—C19—C18 | 120.58 (9) |
C6—C7—H7A | 109.7 | C20—C19—H19A | 119.7 |
O1—C7—H7B | 109.7 | C18—C19—H19A | 119.7 |
C6—C7—H7B | 109.7 | C19—C20—C21 | 120.03 (9) |
H7A—C7—H7B | 108.2 | C19—C20—H20A | 120.0 |
O1—C8—C13 | 120.44 (7) | C21—C20—H20A | 120.0 |
O1—C8—C9 | 119.32 (7) | C16—C21—C20 | 118.56 (8) |
C13—C8—C9 | 120.22 (8) | C16—C21—H21A | 120.7 |
O2—C9—C10 | 124.78 (8) | C20—C21—H21A | 120.7 |
O2—C9—C8 | 115.71 (8) | O2—C22—H22D | 109.5 |
C10—C9—C8 | 119.51 (8) | O2—C22—H22A | 109.5 |
C9—C10—C11 | 119.87 (9) | H22D—C22—H22A | 109.5 |
C9—C10—H10A | 120.1 | O2—C22—H22B | 109.5 |
C11—C10—H10A | 120.1 | H22D—C22—H22B | 109.5 |
C12—C11—C10 | 120.97 (9) | H22A—C22—H22B | 109.5 |
C12—C11—H11A | 119.5 | ||
O4—S1—O5—C14 | −157.73 (6) | C9—C8—C13—C14 | 179.98 (8) |
O3—S1—O5—C14 | −28.44 (7) | C11—C12—C13—C8 | 0.85 (14) |
C16—S1—O5—C14 | 88.06 (7) | C11—C12—C13—C14 | 178.82 (9) |
C6—C1—C2—C3 | −0.05 (19) | S1—O5—C14—C13 | −89.91 (7) |
C1—C2—C3—C4 | −1.44 (18) | S1—O5—C14—C15 | 145.20 (6) |
C2—C3—C4—C5 | 1.17 (16) | C8—C13—C14—O5 | 140.16 (8) |
C3—C4—C5—C6 | 0.59 (15) | C12—C13—C14—O5 | −37.83 (11) |
C2—C1—C6—C5 | 1.79 (16) | C8—C13—C14—C15 | −101.19 (9) |
C2—C1—C6—C7 | −174.91 (10) | C12—C13—C14—C15 | 80.81 (11) |
C4—C5—C6—C1 | −2.06 (14) | O5—C14—C15—Cl1 | 179.41 (5) |
C4—C5—C6—C7 | 174.65 (8) | C13—C14—C15—Cl1 | 57.13 (8) |
C8—O1—C7—C6 | −157.96 (7) | O5—C14—C15—Cl2 | −61.48 (7) |
C1—C6—C7—O1 | −109.63 (10) | C13—C14—C15—Cl2 | 176.24 (6) |
C5—C6—C7—O1 | 73.71 (10) | O5—C14—C15—Cl3 | 58.91 (7) |
C7—O1—C8—C13 | −104.57 (9) | C13—C14—C15—Cl3 | −63.37 (9) |
C7—O1—C8—C9 | 77.03 (10) | O4—S1—C16—C21 | 139.64 (8) |
C22—O2—C9—C10 | −18.96 (14) | O3—S1—C16—C21 | 5.19 (9) |
C22—O2—C9—C8 | 161.48 (8) | O5—S1—C16—C21 | −110.77 (7) |
O1—C8—C9—O2 | −0.15 (12) | O4—S1—C16—C17 | −38.88 (9) |
C13—C8—C9—O2 | −178.55 (8) | O3—S1—C16—C17 | −173.33 (8) |
O1—C8—C9—C10 | −179.73 (8) | O5—S1—C16—C17 | 70.71 (8) |
C13—C8—C9—C10 | 1.86 (13) | C21—C16—C17—C18 | 0.15 (15) |
O2—C9—C10—C11 | 179.85 (9) | S1—C16—C17—C18 | 178.62 (8) |
C8—C9—C10—C11 | −0.61 (15) | C16—C17—C18—C19 | −0.67 (16) |
C9—C10—C11—C12 | −0.52 (16) | C17—C18—C19—C20 | 0.96 (17) |
C10—C11—C12—C13 | 0.41 (16) | C18—C19—C20—C21 | −0.70 (16) |
O1—C8—C13—C12 | 179.63 (8) | C17—C16—C21—C20 | 0.11 (14) |
C9—C8—C13—C12 | −1.98 (13) | S1—C16—C21—C20 | −178.35 (7) |
O1—C8—C13—C14 | 1.60 (12) | C19—C20—C21—C16 | 0.17 (15) |
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7B···O2 | 0.97 | 2.56 | 3.040 (1) | 110 |
C14—H14A···O1 | 0.98 | 2.38 | 2.820 (1) | 107 |
C14—H14A···O3 | 0.98 | 2.34 | 2.838 (1) | 111 |
C21—H21A···O3 | 0.93 | 2.55 | 2.919 (1) | 104 |
C3—H3A···O2i | 0.93 | 2.49 | 3.414 (1) | 172 |
Symmetry code: (i) −x, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C22H19Cl3O5S |
Mr | 501.78 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 8.1638 (1), 8.8536 (1), 30.7221 (5) |
β (°) | 90.670 (1) |
V (Å3) | 2220.41 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.54 |
Crystal size (mm) | 0.48 × 0.30 × 0.29 |
Data collection | |
Diffractometer | Bruker SMART APEX II CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.779, 0.858 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 122837, 13669, 11428 |
Rint | 0.059 |
(sin θ/λ)max (Å−1) | 0.904 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.108, 1.08 |
No. of reflections | 13669 |
No. of parameters | 280 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.57, −0.55 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SAINT, SHELXTL (Sheldrick, 1998), SHELXTL and PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7B···O2 | 0.97 | 2.56 | 3.040 (1) | 110 |
C14—H14A···O1 | 0.98 | 2.38 | 2.820 (1) | 107 |
C14—H14A···O3 | 0.98 | 2.34 | 2.838 (1) | 111 |
C21—H21A···O3 | 0.93 | 2.55 | 2.919 (1) | 104 |
C3—H3A···O2i | 0.93 | 2.49 | 3.414 (1) | 172 |
Symmetry code: (i) −x, y+1/2, −z+1/2. |
Subscribe to Acta Crystallographica Section E: Crystallographic Communications
The full text of this article is available to subscribers to the journal.
- Information on subscribing
- Sample issue
- If you have already subscribed, you may need to register
In our attempt to synthesize new benzimidazole derivatives (Al-Douh et al., 2006a,b), the crystal structure of the title compound, (I), was obtained and determined (Figure 1). Previously, the structure of a 2,2,2-trichloroethyl tosylsulfonate as a functional group has only been determined as an (S) derivative in tosylate (Begley et al., 1978) and as enantiomers in sulfonates (Gill et al., 1979). The research on the physical and chemical properties, including the reaction of the title compound to synthesize biologically important compounds is in progress. We present herein its crystal structure.
The bond lengths and angles in (I) have normal values (Allen et al., 1987) and are comparable with those in the related structures (Begley et al., 1978). The dihedral angle between the benzene rings [(C1—C6) and (C8—C13)] is 22.64 (5)° whereas the torsion angle of C8—O1—C7—C6 is -157.96 (7)°. The methoxy group at C9 is slightly twisted from the plane of the attached benzene ring with torsion angle of C22—O2—C9—C10 = -18.96 (14)°.
The intramolecular C7—H7B···O2 interaction generates an S(6) ring motif, while intramolecular C14—H14A···O1, C14—H14A···O3 and C21—H21A···O3 interaction (Table 1 and Figure 1) generate S(5) ring motifs (Bernstein et al., 1995). In the crystal structure, the molecules are linked by short inter Cl2···O4 ii contact of 3.0170 (8) Å (symmetry code: (ii) -x, -y, -z) into cyclic centrosymmetric R22(12) dimers. These dimers are interlinked by the C3—H3A···O2i (symmetry code: (i) -x, y + 1/2, -z + 1/2) intermolecular interactions.