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The title compound, C
20H
16O
5, also known as 5,7-dihyroxy-3-(2′,2′-dimethyl-2H'-chromen-7′-yl)chroman-4-one, was isolated from the medicinal plant
Ficus mucuso. The benzopyranone (chromen-4-one) ring system is essentially planar and the dihedral angle between the benzopyranone ring system and the other benzene ring is 37.7 (10)°. In the crystal structure, one-dimensional chains are formed
via intermolecular O—H
O hydrogen bonds.
Supporting information
CCDC reference: 636734
Key indicators
- Single-crystal X-ray study
- T = 220 K
- Mean (C-C) = 0.002 Å
- R factor = 0.040
- wR factor = 0.117
- Data-to-parameter ratio = 16.1
checkCIF/PLATON results
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0 ALERT level G = General alerts; check
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
0 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
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| Author Response: Identification and collection of plant, fractionation of extract and
isolation were made at the Departement of Organic Chemistry, Faculty of
Science, UY1, Cameroon by Jean Jules Bankeu , Bruno Ndjakou Lenta, Silvere
Ngouela and Etienne Tsamo. Crystallisation, NMR , Xray analysis ,
interpretation of data were carried on at Bielefed University by Bruno
Ndjakou Lenta, Norbert Sewald, Beate Newmann and Hans-Georg Stammler
|
1 ALERT level A = Data missing that is essential or data in wrong format
0 ALERT level G = General alerts. Data that may be required is missing
Data collection: COLLECT (Nonius, 2002); cell refinement: SCALEPACK (Otwinowski & Minor 1997); data reduction: SCALEPACK and DENZO (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: XP in SHELXTL (Siemens, 1994); software used to prepare material for publication: SHELXL97.
5,7-dihyroxy-3-(2',2'-dimethyl-2H'-chromen-7'-yl)chroman-4-one
top
Crystal data top
C20H16O5 | F(000) = 704 |
Mr = 336.33 | Dx = 1.389 Mg m−3 |
Monoclinic, P21/c | Melting point: 215 K |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 7.9241 (2) Å | Cell parameters from 25785 reflections |
b = 12.4116 (3) Å | θ = 2.9–27.5° |
c = 16.4595 (3) Å | µ = 0.10 mm−1 |
β = 96.5733 (13)° | T = 220 K |
V = 1608.15 (6) Å3 | Rhomb, yellow |
Z = 4 | 0.30 × 0.30 × 0.30 mm |
Data collection top
Bruker–Nonius KappaCCD diffractometer | 3678 independent reflections |
Radiation source: fine-focus sealed tube | 2962 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.034 |
φ scans and ω | θmax = 27.5°, θmin = 3.0° |
Absorption correction: multi-scan (DENZO and SCALEPACK; Otwinowski & Minor, 1997) | h = −10→10 |
Tmin = 0.971, Tmax = 0.971 | k = −16→16 |
38284 measured reflections | l = −21→21 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.117 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0674P)2 + 0.2171P] where P = (Fo2 + 2Fc2)/3 |
3678 reflections | (Δ/σ)max = 0.001 |
228 parameters | Δρmax = 0.20 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | −0.09628 (14) | 0.61604 (8) | 0.43722 (5) | 0.0516 (3) | |
H1 | −0.0599 | 0.6458 | 0.4809 | 0.077* | |
O2 | −0.07379 (12) | 0.64340 (8) | 0.15524 (5) | 0.0445 (2) | |
H2 | −0.0335 | 0.6802 | 0.1200 | 0.067* | |
O3 | 0.22442 (11) | 0.90051 (7) | 0.32948 (5) | 0.0350 (2) | |
O4 | 0.06138 (11) | 0.76088 (7) | 0.53152 (5) | 0.0389 (2) | |
O5 | 0.44099 (12) | 1.10827 (7) | 0.77422 (5) | 0.0383 (2) | |
C1 | −0.03700 (15) | 0.66831 (10) | 0.37441 (7) | 0.0338 (3) | |
C2 | −0.08269 (15) | 0.63165 (11) | 0.29626 (7) | 0.0358 (3) | |
H2A | −0.1537 | 0.5711 | 0.2873 | 0.043* | |
C3 | −0.02351 (15) | 0.68438 (10) | 0.23029 (7) | 0.0335 (3) | |
C4 | 0.08009 (15) | 0.77448 (10) | 0.24153 (7) | 0.0331 (3) | |
H4 | 0.1194 | 0.8098 | 0.1968 | 0.040* | |
C5 | 0.12369 (14) | 0.81064 (9) | 0.32038 (7) | 0.0293 (2) | |
C6 | 0.26833 (15) | 0.94055 (10) | 0.40499 (7) | 0.0338 (3) | |
H6 | 0.3388 | 1.0017 | 0.4094 | 0.041* | |
C7 | 0.21974 (15) | 0.90041 (9) | 0.47490 (7) | 0.0303 (3) | |
C8 | 0.11440 (14) | 0.80424 (9) | 0.46959 (6) | 0.0302 (3) | |
C9 | 0.06967 (14) | 0.76025 (9) | 0.38919 (6) | 0.0292 (2) | |
C10 | 0.27451 (14) | 0.95483 (10) | 0.55400 (7) | 0.0308 (3) | |
C11 | 0.27728 (15) | 1.06718 (10) | 0.56043 (7) | 0.0344 (3) | |
H11 | 0.2421 | 1.1092 | 0.5141 | 0.041* | |
C12 | 0.33114 (16) | 1.11768 (10) | 0.63426 (7) | 0.0352 (3) | |
H12 | 0.3330 | 1.1933 | 0.6374 | 0.042* | |
C13 | 0.38219 (15) | 1.05661 (10) | 0.70334 (7) | 0.0315 (3) | |
C14 | 0.42977 (17) | 1.05071 (10) | 0.85129 (7) | 0.0370 (3) | |
C15 | 0.47297 (17) | 0.93358 (10) | 0.84277 (7) | 0.0380 (3) | |
H15 | 0.5195 | 0.8950 | 0.8891 | 0.046* | |
C16 | 0.44690 (16) | 0.88362 (10) | 0.77126 (7) | 0.0364 (3) | |
H16 | 0.4695 | 0.8095 | 0.7677 | 0.044* | |
C17 | 0.38309 (14) | 0.94398 (9) | 0.69835 (7) | 0.0308 (3) | |
C18 | 0.32896 (15) | 0.89531 (9) | 0.62398 (7) | 0.0315 (3) | |
H18 | 0.3290 | 0.8197 | 0.6207 | 0.038* | |
C19 | 0.5572 (2) | 1.10677 (13) | 0.91300 (8) | 0.0556 (4) | |
H19A | 0.6691 | 1.1034 | 0.8946 | 0.083* | |
H19B | 0.5596 | 1.0713 | 0.9656 | 0.083* | |
H19C | 0.5244 | 1.1815 | 0.9182 | 0.083* | |
C20 | 0.2494 (2) | 1.06373 (12) | 0.87295 (9) | 0.0510 (4) | |
H20A | 0.2250 | 1.1396 | 0.8793 | 0.077* | |
H20B | 0.2381 | 1.0263 | 0.9238 | 0.077* | |
H20C | 0.1702 | 1.0336 | 0.8296 | 0.077* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0690 (7) | 0.0605 (6) | 0.0266 (5) | −0.0275 (5) | 0.0113 (4) | −0.0004 (4) |
O2 | 0.0543 (6) | 0.0564 (6) | 0.0232 (4) | −0.0157 (5) | 0.0060 (4) | −0.0077 (4) |
O3 | 0.0440 (5) | 0.0391 (5) | 0.0223 (4) | −0.0070 (4) | 0.0056 (3) | −0.0006 (3) |
O4 | 0.0489 (5) | 0.0462 (5) | 0.0221 (4) | −0.0064 (4) | 0.0072 (4) | 0.0004 (3) |
O5 | 0.0569 (6) | 0.0335 (5) | 0.0237 (4) | −0.0070 (4) | 0.0015 (4) | −0.0013 (3) |
C1 | 0.0377 (6) | 0.0390 (6) | 0.0257 (5) | −0.0026 (5) | 0.0073 (5) | 0.0010 (5) |
C2 | 0.0383 (6) | 0.0406 (7) | 0.0289 (6) | −0.0058 (5) | 0.0058 (5) | −0.0033 (5) |
C3 | 0.0350 (6) | 0.0427 (7) | 0.0227 (5) | 0.0015 (5) | 0.0032 (4) | −0.0039 (5) |
C4 | 0.0369 (6) | 0.0415 (6) | 0.0216 (5) | −0.0014 (5) | 0.0062 (4) | 0.0002 (5) |
C5 | 0.0297 (5) | 0.0332 (6) | 0.0254 (5) | 0.0023 (4) | 0.0045 (4) | 0.0007 (4) |
C6 | 0.0369 (6) | 0.0361 (6) | 0.0280 (6) | −0.0009 (5) | 0.0019 (5) | −0.0027 (5) |
C7 | 0.0328 (6) | 0.0341 (6) | 0.0236 (5) | 0.0050 (4) | 0.0014 (4) | −0.0011 (4) |
C8 | 0.0319 (6) | 0.0371 (6) | 0.0220 (5) | 0.0045 (5) | 0.0041 (4) | 0.0004 (4) |
C9 | 0.0304 (5) | 0.0350 (6) | 0.0222 (5) | 0.0027 (5) | 0.0037 (4) | 0.0001 (4) |
C10 | 0.0316 (6) | 0.0354 (6) | 0.0251 (5) | 0.0027 (5) | 0.0024 (4) | −0.0017 (4) |
C11 | 0.0391 (6) | 0.0359 (6) | 0.0274 (6) | 0.0056 (5) | 0.0002 (5) | 0.0031 (5) |
C12 | 0.0453 (7) | 0.0286 (6) | 0.0310 (6) | 0.0034 (5) | 0.0014 (5) | 0.0005 (5) |
C13 | 0.0356 (6) | 0.0340 (6) | 0.0246 (5) | −0.0002 (5) | 0.0027 (4) | −0.0029 (4) |
C14 | 0.0511 (7) | 0.0375 (6) | 0.0219 (5) | −0.0065 (5) | 0.0022 (5) | −0.0002 (5) |
C15 | 0.0458 (7) | 0.0400 (7) | 0.0266 (6) | 0.0008 (5) | −0.0022 (5) | 0.0053 (5) |
C16 | 0.0448 (7) | 0.0328 (6) | 0.0305 (6) | 0.0039 (5) | −0.0010 (5) | 0.0030 (5) |
C17 | 0.0334 (6) | 0.0329 (6) | 0.0258 (6) | 0.0027 (5) | 0.0021 (4) | 0.0004 (4) |
C18 | 0.0370 (6) | 0.0290 (6) | 0.0280 (6) | 0.0034 (4) | 0.0012 (5) | −0.0015 (4) |
C19 | 0.0817 (11) | 0.0537 (9) | 0.0290 (7) | −0.0267 (8) | −0.0047 (7) | 0.0010 (6) |
C20 | 0.0596 (9) | 0.0501 (8) | 0.0455 (8) | 0.0031 (7) | 0.0158 (7) | −0.0008 (6) |
Geometric parameters (Å, º) top
O1—C1 | 1.3496 (14) | C10—C18 | 1.3946 (16) |
O1—H1 | 0.83 | C10—C11 | 1.3984 (17) |
O2—C3 | 1.3530 (13) | C11—C12 | 1.3902 (16) |
O2—H2 | 0.83 | C11—H11 | 0.94 |
O3—C6 | 1.3468 (13) | C12—C13 | 1.3876 (16) |
O3—C5 | 1.3698 (14) | C12—H12 | 0.94 |
O4—C8 | 1.2661 (13) | C13—C17 | 1.4004 (17) |
O5—C13 | 1.3655 (13) | C14—C15 | 1.5039 (18) |
O5—C14 | 1.4675 (14) | C14—C19 | 1.5166 (18) |
C1—C2 | 1.3733 (16) | C14—C20 | 1.520 (2) |
C1—C9 | 1.4244 (17) | C15—C16 | 1.3255 (17) |
C2—C3 | 1.3942 (16) | C15—H15 | 0.9400 |
C2—H2A | 0.94 | C16—C17 | 1.4554 (16) |
C3—C4 | 1.3871 (17) | C16—H16 | 0.9400 |
C4—C5 | 1.3793 (15) | C17—C18 | 1.3882 (15) |
C4—H4 | 0.94 | C18—H18 | 0.94 |
C5—C9 | 1.4029 (15) | C19—H19A | 0.97 |
C6—C7 | 1.3498 (16) | C19—H19B | 0.97 |
C6—H6 | 0.94 | C19—H19C | 0.97 |
C7—C8 | 1.4535 (17) | C20—H20A | 0.97 |
C7—C10 | 1.4867 (15) | C20—H20B | 0.97 |
C8—C9 | 1.4379 (15) | C20—H20C | 0.97 |
| | | |
C1—O1—H1 | 109.5 | C13—C12—C11 | 120.10 (11) |
C3—O2—H2 | 109.5 | C13—C12—H12 | 120.0 |
C6—O3—C5 | 119.15 (9) | C11—C12—H12 | 120.0 |
C13—O5—C14 | 117.48 (9) | O5—C13—C12 | 118.85 (11) |
O1—C1—C2 | 118.73 (11) | O5—C13—C17 | 121.02 (10) |
O1—C1—C9 | 120.40 (10) | C12—C13—C17 | 120.01 (10) |
C2—C1—C9 | 120.86 (10) | O5—C14—C15 | 110.67 (9) |
C1—C2—C3 | 119.86 (11) | O5—C14—C19 | 104.71 (10) |
C1—C2—H2A | 120.1 | C15—C14—C19 | 111.39 (12) |
C3—C2—H2A | 120.1 | O5—C14—C20 | 107.61 (11) |
O2—C3—C4 | 122.20 (10) | C15—C14—C20 | 110.78 (11) |
O2—C3—C2 | 116.38 (11) | C19—C14—C20 | 111.46 (12) |
C4—C3—C2 | 121.42 (10) | C16—C15—C14 | 121.41 (11) |
C5—C4—C3 | 117.94 (10) | C16—C15—H15 | 119.3 |
C5—C4—H4 | 121.0 | C14—C15—H15 | 119.3 |
C3—C4—H4 | 121.0 | C15—C16—C17 | 119.70 (12) |
O3—C5—C4 | 116.61 (10) | C15—C16—H16 | 120.2 |
O3—C5—C9 | 120.18 (10) | C17—C16—H16 | 120.2 |
C4—C5—C9 | 123.21 (11) | C18—C17—C13 | 118.88 (10) |
O3—C6—C7 | 125.57 (11) | C18—C17—C16 | 123.10 (11) |
O3—C6—H6 | 117.2 | C13—C17—C16 | 117.98 (10) |
C7—C6—H6 | 117.2 | C17—C18—C10 | 122.20 (11) |
C6—C7—C8 | 118.02 (10) | C17—C18—H18 | 118.9 |
C6—C7—C10 | 119.71 (11) | C10—C18—H18 | 118.9 |
C8—C7—C10 | 122.27 (10) | C14—C19—H19A | 109.5 |
O4—C8—C9 | 120.66 (11) | C14—C19—H19B | 109.5 |
O4—C8—C7 | 122.81 (10) | H19A—C19—H19B | 109.5 |
C9—C8—C7 | 116.52 (10) | C14—C19—H19C | 109.5 |
C5—C9—C1 | 116.70 (10) | H19A—C19—H19C | 109.5 |
C5—C9—C8 | 120.52 (11) | H19B—C19—H19C | 109.5 |
C1—C9—C8 | 122.70 (10) | C14—C20—H20A | 109.5 |
C18—C10—C11 | 117.71 (10) | C14—C20—H20B | 109.5 |
C18—C10—C7 | 120.95 (11) | H20A—C20—H20B | 109.5 |
C11—C10—C7 | 121.32 (10) | C14—C20—H20C | 109.5 |
C12—C11—C10 | 121.09 (11) | H20A—C20—H20C | 109.5 |
C12—C11—H11 | 119.5 | H20B—C20—H20C | 109.5 |
C10—C11—H11 | 119.5 | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O4 | 0.83 | 1.86 | 2.5995 (15) | 147 |
O2—H2···O4i | 0.83 | 1.86 | 2.6842 (16) | 170 |
Symmetry code: (i) x, −y+3/2, z−1/2. |
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