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The structures of the diastereoisomers Λ(+)578-, (I), and Δ(−)578-bis(ethane-1,2-diamine)[β-ethyl (S)-aspartato-κ2N,O1]cobalt(III) bis(perchlorate) monohydrate, (II), both [Co(C6H10N2O4)(C2H8N2)2](ClO4)2·H2O, are compared. In both structures, the ester group of the amino acid side chain is engaged only in intramolecular hydrogen bonding to coordinated amine groups. This interaction is stronger in (I) and correlates with previously observed diastereoisomeric equilibrium ratios for related metal complex systems in aqueous media. The two perchlorate anions of (II) are located on twofold axes. Both perchlorates in (I) and one of the perchlorates in (II) are affected by disorder. Both structures exhibit extensive three-dimensional hydrogen-bonding networks.
Supporting information
CCDC references: 804107; 804108
Complexes (I) and (II) were synthesized as described by Barfod et al.
(1999). Caution! Although we experienced no difficulty with the perchlorate
salts described here, these should be treated as potentially explosive and
handled accordingly. [Crystallization from which solvent?]
The data set of (I) obtained at 298 K was chosen for refinement, since crystals
of (I) disintegrated upon cooling to ~253 K and a tentative data set
collected at 273 K showed signs of deterioration, evidenced by data of poor
quality.
For both structures, H atoms were located in difference Fourier maps and were
included in the refinement as constrained idealized H atoms riding the parent
atom, with C—H = 0.96 (CH3), 0.97 (CH2) or 0.98 Å (CH) and N—H =
0.90 Å in (I), and C—H = 0.98 (CH3), 0.99 (CH2) or 1.00 Å (CH) and
N—H = 0.92 Å in (II), and with Uiso(H) = 1.2Ueq(C,N). In
the final refinement, the coordinates of the H atoms of the solvent water
molecule in (I) had to be fixed, with O—H = 0.85 and 0.86 Å, and with
Uiso(H) = 1.2Ueq(O). The H atoms of the solvent water
molecule in (II) were refined as semi-free with a distance restraint, and with
Uiso(H) = 1.2Ueq(O).
Both perchlorate anions of (I) are disordered. The disorder was resolved by
refining two of the O atoms on Cl1 in two positions, with site-occupancy
factors of 0.546 (9) and 0.454 (9). In the case of the second perchlorate ion,
the entire anion was refined in two positions, with site-occupancy factors of
0.596 (9) and 0.404 (9) and with equal anisotropic displacement parameters for
all O atoms. Furthermore, the perchlorates were restrained in an approximate
tetrahedral geometry.
In (II), the Cl1 perchlorate anion is in a general position, but the other two,
centred at Cl2 and Cl3, are located on the crystallographic twofold axis.
[Please check rephrasing] Furthermore, one of these perchlorates is
disordered. This disorder was resolved by refining the O atoms on Cl3 in two
positions, with site-occupancy factors of 0.565 (13) and 0.435 (13).
For both compounds, data collection: COLLECT (Nonius, 1999); cell refinement: COLLECT (Nonius, 1999); data reduction: EVALCCD (Duisenberg et al., 2003); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and Mercury (Macrae et al., 2006); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
(I)
Λ(+)
578-bis(ethane-1,2-diamine)[
β-ethyl (
S)-aspartato-
κ2N,
O1]cobalt(III) bis(perchlorate) monohydrate
top
Crystal data top
[Co(C6H10N2O4)(C2H8N2)2](ClO4)2·H2O | F(000) = 576 |
Mr = 556.20 | Dx = 1.685 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2yb | Cell parameters from 12384 reflections |
a = 11.6507 (4) Å | θ = 1.9–27.5° |
b = 8.7600 (5) Å | µ = 1.10 mm−1 |
c = 11.7169 (6) Å | T = 298 K |
β = 113.572 (4)° | Prism, orange |
V = 1096.04 (9) Å3 | 0.35 × 0.14 × 0.13 mm |
Z = 2 | |
Data collection top
Nonius KappaCCD area-detector diffractometer | 4996 independent reflections |
Radiation source: fine-focus sealed tube | 4684 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
ω and ϕ scans | θmax = 27.5°, θmin = 1.9° |
Absorption correction: integration (Gaussian integration; Coppens, 1970) | h = −15→15 |
Tmin = 0.675, Tmax = 0.898 | k = −11→11 |
31975 measured reflections | l = −15→15 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.045 | H-atom parameters constrained |
wR(F2) = 0.139 | w = 1/[σ2(Fo2) + (0.0895P)2 + 0.7174P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max = 0.016 |
4996 reflections | Δρmax = 0.57 e Å−3 |
285 parameters | Δρmin = −0.36 e Å−3 |
161 restraints | Absolute structure: Flack (1983), 2329 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.01 (2) |
Crystal data top
[Co(C6H10N2O4)(C2H8N2)2](ClO4)2·H2O | V = 1096.04 (9) Å3 |
Mr = 556.20 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 11.6507 (4) Å | µ = 1.10 mm−1 |
b = 8.7600 (5) Å | T = 298 K |
c = 11.7169 (6) Å | 0.35 × 0.14 × 0.13 mm |
β = 113.572 (4)° | |
Data collection top
Nonius KappaCCD area-detector diffractometer | 4996 independent reflections |
Absorption correction: integration (Gaussian integration; Coppens, 1970) | 4684 reflections with I > 2σ(I) |
Tmin = 0.675, Tmax = 0.898 | Rint = 0.033 |
31975 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.045 | H-atom parameters constrained |
wR(F2) = 0.139 | Δρmax = 0.57 e Å−3 |
S = 1.05 | Δρmin = −0.36 e Å−3 |
4996 reflections | Absolute structure: Flack (1983), 2329 Friedel pairs |
285 parameters | Absolute structure parameter: 0.01 (2) |
161 restraints | |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and
goodness of fit S are based on F2, conventional R-factors R are based
on F, with F set to zero for negative F2. The threshold expression of
F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is
not relevant to the choice of reflections for refinement. R-factors based
on F2 are statistically about twice as large as those based on F, and R-
factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
Co1 | 0.38979 (4) | 0.09231 (6) | 0.75245 (4) | 0.03511 (14) | |
N1 | 0.2259 (3) | 0.1929 (4) | 0.6896 (3) | 0.0442 (7) | |
H1A | 0.1924 | 0.1922 | 0.6058 | 0.053* | |
H1B | 0.1738 | 0.1425 | 0.7161 | 0.053* | |
O1 | 0.4469 (2) | 0.2621 (3) | 0.8588 (2) | 0.0385 (5) | |
O2 | 0.3829 (3) | 0.4753 (4) | 0.9194 (3) | 0.0492 (7) | |
O3 | 0.1704 (5) | 0.2077 (6) | 0.9104 (4) | 0.0808 (13) | |
C1 | 0.2417 (4) | 0.3527 (5) | 0.7357 (4) | 0.0403 (8) | |
H1 | 0.2469 | 0.4184 | 0.6703 | 0.048* | |
C2 | 0.3641 (4) | 0.3658 (5) | 0.8484 (4) | 0.0374 (8) | |
C3 | 0.1317 (4) | 0.4078 (6) | 0.7641 (5) | 0.0531 (10) | |
H3A | 0.1405 | 0.5164 | 0.7816 | 0.064* | |
H3B | 0.0544 | 0.3920 | 0.6915 | 0.064* | |
C4 | 0.1243 (5) | 0.3265 (8) | 0.8718 (6) | 0.0632 (13) | |
O4 | 0.0557 (7) | 0.4030 (8) | 0.9200 (6) | 0.115 (2) | |
C5 | 0.0527 (8) | 0.3507 (18) | 1.0389 (11) | 0.143 (5) | |
H5A | 0.0812 | 0.4305 | 1.1014 | 0.171* | |
H5B | 0.1048 | 0.2611 | 1.0701 | 0.171* | |
C6 | −0.0840 (9) | 0.313 (2) | 1.0054 (15) | 0.160 (6) | |
H6A | −0.0959 | 0.2873 | 1.0795 | 0.192* | |
H6B | −0.1082 | 0.2286 | 0.9487 | 0.192* | |
H6C | −0.1346 | 0.4005 | 0.9667 | 0.192* | |
N11 | 0.3570 (3) | −0.0125 (4) | 0.8841 (3) | 0.0447 (7) | |
H11A | 0.4248 | −0.0062 | 0.9565 | 0.054* | |
H11B | 0.2923 | 0.0322 | 0.8945 | 0.054* | |
C12 | 0.3274 (7) | −0.1741 (7) | 0.8490 (7) | 0.0721 (17) | |
H12A | 0.4041 | −0.2333 | 0.8761 | 0.087* | |
H12B | 0.2757 | −0.2150 | 0.8892 | 0.087* | |
C13 | 0.2610 (7) | −0.1850 (8) | 0.7137 (8) | 0.0796 (19) | |
H13A | 0.2592 | −0.2905 | 0.6878 | 0.095* | |
H13B | 0.1752 | −0.1508 | 0.6892 | 0.095* | |
N14 | 0.3232 (4) | −0.0914 (5) | 0.6529 (4) | 0.0538 (9) | |
H14A | 0.2684 | −0.0652 | 0.5762 | 0.065* | |
H14B | 0.3859 | −0.1446 | 0.6454 | 0.065* | |
N15 | 0.5623 (3) | 0.0169 (4) | 0.8201 (3) | 0.0423 (7) | |
H15A | 0.5956 | 0.0245 | 0.9037 | 0.051* | |
H15B | 0.5638 | −0.0819 | 0.7996 | 0.051* | |
C16 | 0.6357 (4) | 0.1103 (8) | 0.7673 (5) | 0.0570 (12) | |
H16A | 0.7129 | 0.0585 | 0.7780 | 0.068* | |
H16B | 0.6564 | 0.2084 | 0.8090 | 0.068* | |
C17 | 0.5562 (5) | 0.1317 (6) | 0.6326 (4) | 0.0553 (11) | |
H17A | 0.5456 | 0.0354 | 0.5887 | 0.066* | |
H17B | 0.5949 | 0.2041 | 0.5962 | 0.066* | |
N18 | 0.4328 (4) | 0.1904 (5) | 0.6235 (3) | 0.0460 (8) | |
H18A | 0.3734 | 0.1697 | 0.5476 | 0.055* | |
H18B | 0.4366 | 0.2923 | 0.6342 | 0.055* | |
Cl1 | 0.41478 (12) | 0.0984 (2) | 0.27769 (12) | 0.0647 (3) | |
O11 | 0.4149 (6) | 0.2379 (5) | 0.3358 (6) | 0.0981 (17) | |
O12 | 0.5408 (5) | 0.0408 (7) | 0.3286 (6) | 0.1060 (19) | |
O13 | 0.3969 (12) | 0.1455 (15) | 0.1491 (8) | 0.115 (2) | 0.549 (10) |
O14 | 0.3244 (12) | −0.0029 (13) | 0.2696 (11) | 0.115 (2) | 0.549 (10) |
O13A | 0.3642 (16) | 0.062 (2) | 0.1538 (12) | 0.115 (2) | 0.451 (10) |
O14A | 0.3617 (16) | −0.004 (2) | 0.3452 (13) | 0.115 (2) | 0.451 (10) |
Cl2 | −0.1103 (7) | 0.0471 (14) | 0.5991 (7) | 0.085 (2) | 0.602 (9) |
O21 | −0.0653 (14) | 0.060 (3) | 0.5078 (11) | 0.180 (3) | 0.602 (9) |
O22 | −0.0066 (10) | 0.040 (2) | 0.7161 (10) | 0.180 (3) | 0.602 (9) |
O23 | −0.1975 (15) | −0.074 (2) | 0.5713 (14) | 0.180 (3) | 0.602 (9) |
O24 | −0.1681 (13) | 0.1870 (19) | 0.6051 (13) | 0.180 (3) | 0.602 (9) |
Cl2A | −0.0974 (11) | 0.005 (2) | 0.6039 (11) | 0.089 (4) | 0.398 (9) |
O21A | −0.043 (2) | 0.074 (4) | 0.5342 (18) | 0.180 (3) | 0.398 (9) |
O22A | −0.0333 (17) | −0.120 (3) | 0.6786 (17) | 0.180 (3) | 0.398 (9) |
O23A | −0.2246 (16) | −0.026 (4) | 0.5256 (18) | 0.180 (3) | 0.398 (9) |
O24A | −0.1168 (17) | 0.100 (3) | 0.6964 (16) | 0.180 (3) | 0.398 (9) |
O10 | 0.1670 (5) | 0.0841 (12) | 0.4106 (5) | 0.127 (2) | |
H10A | 0.2168 | 0.0579 | 0.3764 | 0.152* | |
H10B | 0.1789 | 0.1801 | 0.4228 | 0.152* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Co1 | 0.0371 (2) | 0.0355 (2) | 0.0305 (2) | −0.0014 (2) | 0.01125 (15) | −0.0046 (2) |
N1 | 0.0375 (15) | 0.0494 (19) | 0.0387 (15) | −0.0014 (14) | 0.0078 (13) | −0.0043 (14) |
O1 | 0.0386 (13) | 0.0380 (13) | 0.0337 (12) | 0.0008 (11) | 0.0091 (10) | −0.0054 (10) |
O2 | 0.0606 (17) | 0.0422 (15) | 0.0437 (15) | 0.0026 (13) | 0.0196 (13) | −0.0089 (12) |
O3 | 0.097 (3) | 0.088 (3) | 0.080 (3) | 0.031 (3) | 0.059 (3) | 0.027 (2) |
C1 | 0.0403 (19) | 0.043 (2) | 0.0369 (18) | 0.0036 (16) | 0.0145 (15) | 0.0008 (15) |
C2 | 0.0416 (19) | 0.0361 (18) | 0.0338 (17) | −0.0035 (15) | 0.0143 (15) | −0.0011 (14) |
C3 | 0.044 (2) | 0.058 (3) | 0.058 (2) | 0.0091 (19) | 0.0215 (19) | 0.002 (2) |
C4 | 0.049 (2) | 0.080 (4) | 0.068 (3) | 0.005 (2) | 0.031 (2) | 0.002 (3) |
O4 | 0.142 (5) | 0.128 (5) | 0.124 (5) | 0.055 (4) | 0.104 (4) | 0.028 (4) |
C5 | 0.091 (6) | 0.229 (16) | 0.132 (9) | −0.010 (8) | 0.070 (6) | −0.026 (10) |
C6 | 0.135 (10) | 0.157 (11) | 0.184 (15) | −0.035 (8) | 0.061 (10) | 0.023 (10) |
N11 | 0.0488 (18) | 0.0401 (17) | 0.0473 (18) | 0.0017 (14) | 0.0216 (15) | 0.0027 (14) |
C12 | 0.095 (5) | 0.046 (3) | 0.082 (4) | −0.019 (3) | 0.042 (4) | −0.004 (3) |
C13 | 0.083 (4) | 0.060 (3) | 0.101 (5) | −0.030 (3) | 0.042 (4) | −0.029 (3) |
N14 | 0.059 (2) | 0.046 (2) | 0.051 (2) | −0.0029 (17) | 0.0155 (17) | −0.0162 (17) |
N15 | 0.0442 (16) | 0.0424 (17) | 0.0405 (16) | 0.0044 (14) | 0.0171 (13) | −0.0025 (14) |
C16 | 0.0453 (19) | 0.065 (4) | 0.064 (2) | 0.004 (2) | 0.0257 (18) | 0.002 (3) |
C17 | 0.066 (3) | 0.058 (3) | 0.056 (2) | 0.0075 (19) | 0.039 (2) | 0.0037 (18) |
N18 | 0.0554 (19) | 0.0492 (19) | 0.0339 (15) | 0.0003 (15) | 0.0182 (14) | 0.0002 (14) |
Cl1 | 0.0729 (6) | 0.0564 (6) | 0.0657 (6) | 0.0045 (9) | 0.0286 (5) | −0.0010 (8) |
O11 | 0.138 (5) | 0.059 (3) | 0.114 (4) | 0.013 (3) | 0.067 (4) | 0.002 (3) |
O12 | 0.094 (3) | 0.110 (5) | 0.102 (4) | 0.034 (3) | 0.027 (3) | −0.006 (3) |
O13 | 0.132 (5) | 0.118 (5) | 0.086 (3) | −0.037 (4) | 0.035 (4) | −0.008 (5) |
O14 | 0.132 (5) | 0.118 (5) | 0.086 (3) | −0.037 (4) | 0.035 (4) | −0.008 (5) |
O13A | 0.132 (5) | 0.118 (5) | 0.086 (3) | −0.037 (4) | 0.035 (4) | −0.008 (5) |
O14A | 0.132 (5) | 0.118 (5) | 0.086 (3) | −0.037 (4) | 0.035 (4) | −0.008 (5) |
Cl2 | 0.0484 (17) | 0.151 (7) | 0.0582 (19) | −0.014 (3) | 0.0236 (14) | −0.007 (3) |
O21 | 0.122 (4) | 0.315 (10) | 0.101 (4) | −0.078 (6) | 0.042 (3) | −0.042 (5) |
O22 | 0.122 (4) | 0.315 (10) | 0.101 (4) | −0.078 (6) | 0.042 (3) | −0.042 (5) |
O23 | 0.122 (4) | 0.315 (10) | 0.101 (4) | −0.078 (6) | 0.042 (3) | −0.042 (5) |
O24 | 0.122 (4) | 0.315 (10) | 0.101 (4) | −0.078 (6) | 0.042 (3) | −0.042 (5) |
Cl2A | 0.057 (4) | 0.131 (8) | 0.063 (4) | −0.017 (4) | 0.008 (3) | −0.031 (4) |
O21A | 0.122 (4) | 0.315 (10) | 0.101 (4) | −0.078 (6) | 0.042 (3) | −0.042 (5) |
O22A | 0.122 (4) | 0.315 (10) | 0.101 (4) | −0.078 (6) | 0.042 (3) | −0.042 (5) |
O23A | 0.122 (4) | 0.315 (10) | 0.101 (4) | −0.078 (6) | 0.042 (3) | −0.042 (5) |
O24A | 0.122 (4) | 0.315 (10) | 0.101 (4) | −0.078 (6) | 0.042 (3) | −0.042 (5) |
O10 | 0.105 (4) | 0.188 (7) | 0.072 (3) | −0.030 (6) | 0.019 (3) | −0.002 (5) |
Geometric parameters (Å, º) top
Co1—O1 | 1.883 (3) | C13—N14 | 1.455 (8) |
Co1—N1 | 1.960 (3) | C13—H13A | 0.9700 |
Co1—N11 | 1.959 (4) | C13—H13B | 0.9700 |
Co1—N14 | 1.957 (4) | N14—H14A | 0.9000 |
Co1—N15 | 1.957 (3) | N14—H14B | 0.9000 |
Co1—N18 | 1.969 (3) | N15—C16 | 1.486 (6) |
N1—C1 | 1.485 (6) | N15—H15A | 0.9000 |
N1—H1A | 0.9000 | N15—H15B | 0.9000 |
N1—H1B | 0.9000 | C16—C17 | 1.488 (7) |
O1—C2 | 1.294 (5) | C16—H16A | 0.9700 |
O2—C2 | 1.231 (5) | C16—H16B | 0.9700 |
O3—C4 | 1.176 (8) | C17—N18 | 1.491 (6) |
C1—C2 | 1.511 (6) | C17—H17A | 0.9700 |
C1—C3 | 1.525 (6) | C17—H17B | 0.9700 |
C1—H1 | 0.9800 | N18—H18A | 0.9000 |
C3—C4 | 1.481 (7) | N18—H18B | 0.9000 |
C3—H3A | 0.9700 | Cl1—O14 | 1.351 (9) |
C3—H3B | 0.9700 | Cl1—O13A | 1.369 (13) |
C4—O4 | 1.330 (7) | Cl1—O11 | 1.398 (5) |
O4—C5 | 1.480 (13) | Cl1—O12 | 1.437 (5) |
C5—C6 | 1.516 (5) | Cl1—O14A | 1.484 (14) |
C5—H5A | 0.9700 | Cl1—O13 | 1.494 (9) |
C5—H5B | 0.9700 | Cl2—O21 | 1.371 (11) |
C6—H6A | 0.9600 | Cl2—O24 | 1.414 (13) |
C6—H6B | 0.9600 | Cl2—O23 | 1.416 (12) |
C6—H6C | 0.9600 | Cl2—O22 | 1.421 (11) |
N11—C12 | 1.477 (7) | Cl2A—O21A | 1.362 (13) |
N11—H11A | 0.9000 | Cl2A—O22A | 1.418 (14) |
N11—H11B | 0.9000 | Cl2A—O23A | 1.423 (13) |
C12—C13 | 1.463 (11) | Cl2A—O24A | 1.454 (14) |
C12—H12A | 0.9700 | O10—H10A | 0.860 |
C12—H12B | 0.9700 | O10—H10B | 0.860 |
| | | |
O1—Co1—N15 | 87.98 (13) | H12A—C12—H12B | 108.3 |
O1—Co1—N14 | 174.39 (16) | N14—C13—C12 | 110.0 (5) |
N15—Co1—N14 | 93.56 (16) | N14—C13—H13A | 109.7 |
O1—Co1—N11 | 88.69 (14) | C12—C13—H13A | 109.7 |
N15—Co1—N11 | 90.84 (15) | N14—C13—H13B | 109.7 |
N14—Co1—N11 | 85.89 (17) | C12—C13—H13B | 109.7 |
O1—Co1—N1 | 85.79 (13) | H13A—C13—H13B | 108.2 |
N15—Co1—N1 | 172.98 (16) | C13—N14—Co1 | 109.2 (3) |
N14—Co1—N1 | 92.95 (16) | C13—N14—H14A | 109.8 |
N11—Co1—N1 | 92.24 (16) | Co1—N14—H14A | 109.8 |
O1—Co1—N18 | 91.85 (14) | C13—N14—H14B | 109.8 |
N15—Co1—N18 | 85.60 (15) | Co1—N14—H14B | 109.8 |
N14—Co1—N18 | 93.65 (17) | H14A—N14—H14B | 108.3 |
N11—Co1—N18 | 176.37 (17) | C16—N15—Co1 | 108.3 (3) |
N1—Co1—N18 | 91.38 (16) | C16—N15—H15A | 110.0 |
C1—N1—Co1 | 109.1 (2) | Co1—N15—H15A | 110.0 |
C1—N1—H1A | 109.9 | C16—N15—H15B | 110.0 |
Co1—N1—H1A | 109.9 | Co1—N15—H15B | 110.0 |
C1—N1—H1B | 109.9 | H15A—N15—H15B | 108.4 |
Co1—N1—H1B | 109.9 | N15—C16—C17 | 107.1 (4) |
H1A—N1—H1B | 108.3 | N15—C16—H16A | 110.3 |
C2—O1—Co1 | 116.1 (2) | C17—C16—H16A | 110.3 |
N1—C1—C2 | 109.0 (3) | N15—C16—H16B | 110.3 |
N1—C1—C3 | 112.6 (4) | C17—C16—H16B | 110.3 |
C2—C1—C3 | 111.6 (4) | H16A—C16—H16B | 108.6 |
N1—C1—H1 | 107.8 | C16—C17—N18 | 107.0 (3) |
C2—C1—H1 | 107.8 | C16—C17—H17A | 110.3 |
C3—C1—H1 | 107.8 | N18—C17—H17A | 110.3 |
O2—C2—O1 | 124.0 (4) | C16—C17—H17B | 110.3 |
O2—C2—C1 | 120.0 (4) | N18—C17—H17B | 110.3 |
O1—C2—C1 | 115.9 (3) | H17A—C17—H17B | 108.6 |
C4—C3—C1 | 111.9 (4) | C17—N18—Co1 | 109.2 (3) |
C4—C3—H3A | 109.2 | C17—N18—H18A | 109.8 |
C1—C3—H3A | 109.2 | Co1—N18—H18A | 109.8 |
C4—C3—H3B | 109.2 | C17—N18—H18B | 109.8 |
C1—C3—H3B | 109.2 | Co1—N18—H18B | 109.8 |
H3A—C3—H3B | 107.9 | H18A—N18—H18B | 108.3 |
O3—C4—O4 | 122.8 (6) | O14—Cl1—O13A | 77.1 (7) |
O3—C4—C3 | 125.5 (5) | O14—Cl1—O11 | 117.2 (6) |
O4—C4—C3 | 111.7 (5) | O13A—Cl1—O11 | 129.7 (8) |
C4—O4—C5 | 119.3 (7) | O14—Cl1—O12 | 115.8 (7) |
O4—C5—C6 | 103.9 (9) | O13A—Cl1—O12 | 107.0 (8) |
O4—C5—H5A | 111.0 | O11—Cl1—O12 | 107.7 (4) |
C6—C5—H5A | 111.0 | O13A—Cl1—O14A | 109.2 (8) |
O4—C5—H5B | 111.0 | O11—Cl1—O14A | 100.8 (7) |
C6—C5—H5B | 111.0 | O12—Cl1—O14A | 98.1 (8) |
H5A—C5—H5B | 109.0 | O14—Cl1—O13 | 108.7 (6) |
C5—C6—H6A | 109.5 | O11—Cl1—O13 | 102.9 (5) |
C5—C6—H6B | 109.5 | O12—Cl1—O13 | 102.9 (6) |
H6A—C6—H6B | 109.5 | O14A—Cl1—O13 | 141.7 (7) |
C5—C6—H6C | 109.5 | O21—Cl2—O24 | 107.8 (13) |
H6A—C6—H6C | 109.5 | O21—Cl2—O23 | 110.2 (11) |
H6B—C6—H6C | 109.5 | O24—Cl2—O23 | 110.5 (10) |
C12—N11—Co1 | 109.1 (3) | O21—Cl2—O22 | 108.3 (9) |
C12—N11—H11A | 109.9 | O24—Cl2—O22 | 103.2 (11) |
Co1—N11—H11A | 109.9 | O23—Cl2—O22 | 116.3 (11) |
C12—N11—H11B | 109.9 | O21A—Cl2A—O22A | 117.1 (17) |
Co1—N11—H11B | 109.9 | O21A—Cl2A—O23A | 108.4 (14) |
H11A—N11—H11B | 108.3 | O22A—Cl2A—O23A | 113.8 (15) |
C13—C12—N11 | 109.2 (5) | O21A—Cl2A—O24A | 116.4 (17) |
C13—C12—H12A | 109.8 | O22A—Cl2A—O24A | 100.6 (14) |
N11—C12—H12A | 109.8 | O23A—Cl2A—O24A | 99.2 (13) |
C13—C12—H12B | 109.8 | H10A—O10—H10B | 104.0 |
N11—C12—H12B | 109.8 | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1B···O3 | 0.90 | 2.36 | 2.909 (5) | 119 |
N1—H1A···O10 | 0.90 | 2.38 | 3.205 (7) | 152 |
N1—H1B···O22 | 0.90 | 2.29 | 3.147 (14) | 160 |
N1—H1B···O21A | 0.90 | 2.64 | 3.10 (2) | 113 |
N11—H11A···O2i | 0.90 | 2.13 | 2.985 (5) | 158 |
N11—H11B···O3 | 0.90 | 2.15 | 3.013 (6) | 160 |
N14—H14A···O10 | 0.90 | 2.24 | 3.099 (8) | 159 |
N15—H15A···O2i | 0.90 | 2.03 | 2.880 (5) | 157 |
N15—H15B···O11ii | 0.90 | 2.32 | 3.127 (6) | 149 |
N18—H18B···O12iii | 0.90 | 2.21 | 3.113 (7) | 176 |
O10—H10A···O14 | 0.86 | 2.17 | 3.017 (15) | 173 |
O10—H10A···O14A | 0.86 | 1.95 | 2.778 (19) | 165 |
O10—H10B···O23iv | 0.86 | 2.16 | 3.01 (2) | 173 |
O10—H10B···O22Aiv | 0.86 | 2.40 | 2.99 (2) | 127 |
Symmetry codes: (i) −x+1, y−1/2, −z+2; (ii) −x+1, y−1/2, −z+1; (iii) −x+1, y+1/2, −z+1; (iv) −x, y+1/2, −z+1. |
(II) Δ(-)
578-bis(ethane-1,2-diamine)[
β-ethyl (
S)-aspartato-
κ2N,
O1]cobalt(III) bis(perchlorate) monohydrate
top
Crystal data top
[Co(C6H10N2O4)(C2H8N2)2](ClO4)2·H2O | Dx = 1.748 Mg m−3 |
Mr = 556.20 | Mo Kα radiation, λ = 0.71073 Å |
Tetragonal, P43212 | Cell parameters from 32707 reflections |
Hall symbol: P 4nw 2abw | θ = 1.7–27.5° |
a = 9.2898 (3) Å | µ = 1.14 mm−1 |
c = 48.9696 (14) Å | T = 122 K |
V = 4226.1 (2) Å3 | Prism, orange |
Z = 8 | 0.20 × 0.19 × 0.07 mm |
F(000) = 2304 | |
Data collection top
Nonius KappaCCD area-detector diffractometer | 4818 independent reflections |
Radiation source: fine-focus sealed tube | 4583 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.055 |
ω and ϕ scans | θmax = 27.5°, θmin = 2.2° |
Absorption correction: integration (Gaussian integration; Coppens, 1970) | h = −12→12 |
Tmin = 0.810, Tmax = 0.924 | k = −12→12 |
84126 measured reflections | l = −63→63 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.026 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.064 | w = 1/[σ2(Fo2) + (0.0298P)2 + 3.6785P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
4818 reflections | Δρmax = 0.55 e Å−3 |
302 parameters | Δρmin = −0.87 e Å−3 |
5 restraints | Absolute structure: Flack (1983), with 1893 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.017 (11) |
Crystal data top
[Co(C6H10N2O4)(C2H8N2)2](ClO4)2·H2O | Z = 8 |
Mr = 556.20 | Mo Kα radiation |
Tetragonal, P43212 | µ = 1.14 mm−1 |
a = 9.2898 (3) Å | T = 122 K |
c = 48.9696 (14) Å | 0.20 × 0.19 × 0.07 mm |
V = 4226.1 (2) Å3 | |
Data collection top
Nonius KappaCCD area-detector diffractometer | 4818 independent reflections |
Absorption correction: integration (Gaussian integration; Coppens, 1970) | 4583 reflections with I > 2σ(I) |
Tmin = 0.810, Tmax = 0.924 | Rint = 0.055 |
84126 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.026 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.064 | Δρmax = 0.55 e Å−3 |
S = 1.05 | Δρmin = −0.87 e Å−3 |
4818 reflections | Absolute structure: Flack (1983), with 1893 Friedel pairs |
302 parameters | Absolute structure parameter: −0.017 (11) |
5 restraints | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
Co1 | 0.23045 (3) | 0.56261 (3) | 0.085906 (5) | 0.00832 (6) | |
N1 | 0.09632 (18) | 0.54275 (18) | 0.11644 (3) | 0.0103 (3) | |
H1A | 0.0035 | 0.5560 | 0.1104 | 0.012* | |
H1B | 0.1033 | 0.4518 | 0.1237 | 0.012* | |
O1 | 0.33189 (15) | 0.69449 (15) | 0.10829 (3) | 0.0098 (3) | |
O2 | 0.34389 (16) | 0.78129 (16) | 0.15067 (3) | 0.0131 (3) | |
O3 | 0.27508 (19) | 0.41040 (18) | 0.15997 (3) | 0.0220 (4) | |
O4 | 0.16021 (17) | 0.43102 (18) | 0.20028 (3) | 0.0191 (3) | |
C1 | 0.1315 (2) | 0.6519 (2) | 0.13766 (4) | 0.0090 (4) | |
H1 | 0.0636 | 0.7338 | 0.1345 | 0.011* | |
C2 | 0.2815 (2) | 0.7120 (2) | 0.13273 (4) | 0.0095 (4) | |
C3 | 0.1033 (2) | 0.6007 (2) | 0.16663 (4) | 0.0124 (4) | |
H3A | 0.1252 | 0.6802 | 0.1794 | 0.015* | |
H3B | −0.0002 | 0.5774 | 0.1685 | 0.015* | |
C4 | 0.1903 (2) | 0.4709 (2) | 0.17465 (4) | 0.0132 (4) | |
C5 | 0.2501 (3) | 0.3192 (3) | 0.21218 (5) | 0.0253 (5) | |
H5A | 0.2745 | 0.2469 | 0.1981 | 0.030* | |
H5B | 0.1967 | 0.2698 | 0.2270 | 0.030* | |
C6 | 0.3853 (3) | 0.3835 (3) | 0.22345 (6) | 0.0365 (7) | |
H6A | 0.4447 | 0.3075 | 0.2315 | 0.044* | |
H6B | 0.3608 | 0.4546 | 0.2375 | 0.044* | |
H6C | 0.4389 | 0.4307 | 0.2087 | 0.044* | |
N11 | 0.35455 (18) | 0.41039 (19) | 0.10045 (3) | 0.0120 (3) | |
H11A | 0.4016 | 0.4433 | 0.1158 | 0.014* | |
H11B | 0.2993 | 0.3324 | 0.1054 | 0.014* | |
C12 | 0.4613 (2) | 0.3662 (2) | 0.07960 (4) | 0.0167 (4) | |
H12A | 0.4164 | 0.3016 | 0.0660 | 0.020* | |
H12B | 0.5430 | 0.3151 | 0.0882 | 0.020* | |
C13 | 0.5120 (2) | 0.5037 (2) | 0.06626 (5) | 0.0160 (4) | |
H13A | 0.5701 | 0.5611 | 0.0793 | 0.019* | |
H13B | 0.5720 | 0.4817 | 0.0501 | 0.019* | |
N14 | 0.38064 (18) | 0.5852 (2) | 0.05796 (3) | 0.0133 (3) | |
H14A | 0.3476 | 0.5513 | 0.0415 | 0.016* | |
H14B | 0.4028 | 0.6812 | 0.0559 | 0.016* | |
N15 | 0.11508 (18) | 0.4312 (2) | 0.06352 (3) | 0.0134 (3) | |
H15A | 0.1711 | 0.3930 | 0.0498 | 0.016* | |
H15B | 0.0815 | 0.3566 | 0.0741 | 0.016* | |
C16 | −0.0088 (2) | 0.5115 (3) | 0.05141 (5) | 0.0200 (5) | |
H16A | −0.0893 | 0.5163 | 0.0646 | 0.024* | |
H16B | −0.0431 | 0.4623 | 0.0347 | 0.024* | |
C17 | 0.0432 (2) | 0.6613 (2) | 0.04456 (4) | 0.0177 (4) | |
H17A | 0.1108 | 0.6582 | 0.0289 | 0.021* | |
H17B | −0.0391 | 0.7238 | 0.0396 | 0.021* | |
N18 | 0.11710 (19) | 0.71749 (19) | 0.06940 (3) | 0.0123 (3) | |
H18A | 0.0500 | 0.7506 | 0.0817 | 0.015* | |
H18B | 0.1764 | 0.7929 | 0.0647 | 0.015* | |
Cl1 | 0.17332 (5) | 0.07588 (6) | 0.103024 (11) | 0.01638 (11) | |
O11 | 0.09154 (17) | −0.04003 (16) | 0.11450 (3) | 0.0192 (3) | |
O12 | 0.3110 (2) | 0.0861 (2) | 0.11591 (5) | 0.0457 (6) | |
O13 | 0.09670 (17) | 0.20982 (16) | 0.10747 (3) | 0.0203 (3) | |
O14 | 0.1915 (3) | 0.0541 (2) | 0.07447 (4) | 0.0501 (6) | |
Cl2 | 0.2925 | 0.2925 | 0.0000 | 0.01723 (15) | |
O21 | 0.2552 (2) | 0.2067 (2) | 0.02326 (3) | 0.0304 (4) | |
O22 | 0.2681 (2) | 0.4413 (2) | 0.00661 (4) | 0.0345 (5) | |
Cl3 | 0.6703 | 0.6703 | 0.0000 | 0.01984 (15) | |
O31 | 0.7031 (4) | 0.7125 (8) | 0.02820 (12) | 0.0405 (19) | 0.565 (13) |
O32 | 0.5347 (8) | 0.7266 (10) | −0.00668 (14) | 0.060 (2) | 0.565 (13) |
O31X | 0.7162 (9) | 0.7846 (10) | 0.0157 (2) | 0.069 (3) | 0.435 (13) |
O32X | 0.5181 (8) | 0.6563 (15) | 0.00084 (16) | 0.066 (3) | 0.435 (13) |
O10 | 0.3470 (2) | 0.8751 (2) | 0.03275 (4) | 0.0290 (4) | |
H10A | 0.416 (3) | 0.868 (3) | 0.0229 (5) | 0.035* | |
H10B | 0.330 (4) | 0.961 (2) | 0.0329 (6) | 0.035* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Co1 | 0.00788 (13) | 0.00886 (13) | 0.00820 (11) | −0.00048 (10) | 0.00033 (10) | −0.00106 (10) |
N1 | 0.0077 (8) | 0.0118 (8) | 0.0115 (7) | −0.0008 (6) | 0.0001 (6) | −0.0004 (6) |
O1 | 0.0092 (6) | 0.0099 (7) | 0.0104 (6) | −0.0006 (5) | 0.0013 (5) | −0.0006 (5) |
O2 | 0.0120 (7) | 0.0145 (7) | 0.0128 (7) | −0.0010 (6) | −0.0011 (6) | −0.0029 (6) |
O3 | 0.0286 (9) | 0.0228 (8) | 0.0147 (7) | 0.0125 (7) | 0.0034 (7) | 0.0017 (6) |
O4 | 0.0224 (8) | 0.0223 (8) | 0.0126 (7) | 0.0034 (7) | 0.0018 (6) | 0.0051 (6) |
C1 | 0.0087 (9) | 0.0087 (9) | 0.0094 (8) | 0.0002 (7) | −0.0001 (7) | −0.0003 (7) |
C2 | 0.0098 (9) | 0.0075 (8) | 0.0112 (9) | 0.0036 (7) | −0.0013 (7) | 0.0007 (7) |
C3 | 0.0135 (10) | 0.0129 (10) | 0.0107 (9) | 0.0000 (8) | 0.0018 (8) | −0.0009 (8) |
C4 | 0.0150 (10) | 0.0132 (10) | 0.0114 (9) | −0.0031 (7) | −0.0009 (8) | 0.0001 (8) |
C5 | 0.0339 (14) | 0.0236 (12) | 0.0183 (11) | 0.0052 (11) | −0.0017 (10) | 0.0104 (9) |
C6 | 0.0318 (15) | 0.0465 (18) | 0.0312 (14) | 0.0028 (12) | −0.0121 (12) | 0.0090 (13) |
N11 | 0.0123 (8) | 0.0110 (8) | 0.0127 (8) | −0.0002 (6) | 0.0011 (6) | −0.0008 (6) |
C12 | 0.0158 (11) | 0.0169 (10) | 0.0175 (10) | 0.0064 (8) | 0.0020 (8) | −0.0026 (8) |
C13 | 0.0108 (10) | 0.0210 (11) | 0.0161 (10) | 0.0039 (8) | 0.0032 (8) | −0.0010 (9) |
N14 | 0.0133 (8) | 0.0155 (9) | 0.0111 (8) | −0.0003 (7) | 0.0018 (6) | −0.0013 (7) |
N15 | 0.0126 (8) | 0.0149 (9) | 0.0126 (8) | −0.0018 (7) | 0.0009 (7) | −0.0034 (7) |
C16 | 0.0149 (11) | 0.0231 (12) | 0.0220 (11) | −0.0001 (9) | −0.0065 (9) | −0.0060 (9) |
C17 | 0.0196 (11) | 0.0199 (11) | 0.0136 (10) | 0.0019 (9) | −0.0053 (8) | −0.0012 (8) |
N18 | 0.0131 (8) | 0.0133 (8) | 0.0105 (8) | 0.0006 (7) | −0.0005 (6) | −0.0011 (7) |
Cl1 | 0.0154 (2) | 0.0104 (2) | 0.0233 (3) | −0.00101 (19) | 0.00586 (19) | 0.00234 (19) |
O11 | 0.0191 (8) | 0.0100 (7) | 0.0283 (8) | −0.0009 (6) | 0.0085 (7) | 0.0057 (6) |
O12 | 0.0190 (9) | 0.0234 (10) | 0.0948 (18) | −0.0020 (8) | −0.0185 (11) | 0.0094 (11) |
O13 | 0.0187 (8) | 0.0093 (7) | 0.0330 (9) | 0.0012 (6) | 0.0018 (7) | 0.0033 (7) |
O14 | 0.0891 (18) | 0.0352 (12) | 0.0260 (10) | −0.0043 (12) | 0.0296 (11) | −0.0001 (9) |
Cl2 | 0.0197 (4) | 0.022 | 0.0102 (3) | −0.0020 (3) | 0.000 | 0.000 |
O21 | 0.0380 (11) | 0.0336 (10) | 0.0196 (8) | −0.0037 (9) | 0.0089 (8) | 0.0074 (7) |
O22 | 0.0552 (13) | 0.0237 (9) | 0.0246 (9) | 0.0050 (9) | −0.0024 (8) | −0.0099 (7) |
Cl3 | 0.0192 (4) | 0.023 | 0.0175 (3) | 0.0026 (3) | 0.000 | 0.000 |
O31 | 0.037 (2) | 0.052 (4) | 0.033 (3) | 0.006 (2) | −0.0103 (18) | −0.023 (3) |
O32 | 0.048 (4) | 0.094 (5) | 0.039 (3) | 0.048 (4) | −0.019 (3) | −0.020 (3) |
O31X | 0.125 (7) | 0.037 (4) | 0.044 (5) | −0.011 (4) | −0.019 (4) | −0.028 (4) |
O32X | 0.022 (3) | 0.140 (9) | 0.037 (3) | −0.005 (4) | 0.003 (2) | 0.034 (4) |
O10 | 0.0335 (11) | 0.0249 (9) | 0.0287 (9) | 0.0027 (8) | −0.0006 (8) | 0.0042 (8) |
Geometric parameters (Å, º) top
Co1—O1 | 1.8948 (14) | C13—H13B | 0.9900 |
Co1—N1 | 1.9552 (16) | N14—H14A | 0.9200 |
Co1—N11 | 1.9586 (17) | N14—H14B | 0.9200 |
Co1—N14 | 1.9655 (17) | N15—C16 | 1.494 (3) |
Co1—N15 | 1.9600 (17) | N15—H15A | 0.9200 |
Co1—N18 | 1.9575 (18) | N15—H15B | 0.9200 |
N1—C1 | 1.488 (2) | C16—C17 | 1.510 (3) |
N1—H1A | 0.9200 | C16—H16A | 0.9900 |
N1—H1B | 0.9200 | C16—H16B | 0.9900 |
O1—C2 | 1.296 (2) | C17—N18 | 1.491 (3) |
O2—C2 | 1.234 (2) | C17—H17A | 0.9900 |
O3—C4 | 1.206 (3) | C17—H17B | 0.9900 |
C1—C2 | 1.521 (3) | N18—H18A | 0.9200 |
C1—C3 | 1.519 (3) | N18—H18B | 0.9200 |
C1—H1 | 1.0000 | Cl1—O14 | 1.4230 (19) |
C3—C4 | 1.503 (3) | Cl1—O12 | 1.429 (2) |
O4—C4 | 1.338 (2) | Cl1—O11 | 1.4327 (15) |
O4—C5 | 1.455 (3) | Cl1—O13 | 1.4499 (16) |
C3—H3A | 0.9900 | Cl2—O21 | 1.4331 (17) |
C3—H3B | 0.9900 | Cl2—O21i | 1.4332 (17) |
C5—C6 | 1.496 (4) | Cl2—O22 | 1.4375 (18) |
C5—H5A | 0.9900 | Cl2—O22i | 1.4375 (18) |
C5—H5B | 0.9900 | Cl3—O31X | 1.379 (5) |
C6—H6A | 0.9800 | Cl3—O31Xi | 1.379 (5) |
C6—H6B | 0.9800 | Cl3—O32i | 1.403 (5) |
C6—H6C | 0.9800 | Cl3—O32 | 1.403 (5) |
N11—C12 | 1.481 (3) | Cl3—O32Xi | 1.421 (7) |
N11—H11A | 0.9200 | Cl3—O32X | 1.421 (7) |
N11—H11B | 0.9200 | Cl3—O31 | 1.468 (4) |
C12—C13 | 1.510 (3) | Cl3—O31i | 1.468 (4) |
C12—H12A | 0.9900 | O31X—O31Xi | 1.784 (16) |
C12—H12B | 0.9900 | O32X—O32Xi | 1.82 (2) |
C13—N14 | 1.493 (3) | O10—H10A | 0.802 (18) |
C13—H13A | 0.9900 | O10—H10B | 0.814 (18) |
| | | |
O1—Co1—N1 | 86.31 (6) | H13A—C13—H13B | 108.6 |
O1—Co1—N18 | 91.78 (7) | C13—N14—Co1 | 109.68 (13) |
N1—Co1—N18 | 92.43 (7) | C13—N14—H14A | 109.7 |
O1—Co1—N11 | 87.92 (7) | Co1—N14—H14A | 109.7 |
N1—Co1—N11 | 91.66 (7) | C13—N14—H14B | 109.7 |
N18—Co1—N11 | 175.88 (7) | Co1—N14—H14B | 109.7 |
O1—Co1—N15 | 176.67 (7) | H14A—N14—H14B | 108.2 |
N1—Co1—N15 | 91.18 (7) | C16—N15—Co1 | 109.39 (14) |
N18—Co1—N15 | 86.14 (8) | C16—N15—H15A | 109.8 |
N11—Co1—N15 | 94.33 (8) | Co1—N15—H15A | 109.8 |
O1—Co1—N14 | 88.88 (7) | C16—N15—H15B | 109.8 |
N1—Co1—N14 | 174.23 (7) | Co1—N15—H15B | 109.8 |
N18—Co1—N14 | 90.91 (8) | H15A—N15—H15B | 108.2 |
N11—Co1—N14 | 84.98 (7) | N15—C16—C17 | 107.57 (18) |
N15—Co1—N14 | 93.75 (7) | N15—C16—H16A | 110.2 |
C1—N1—Co1 | 109.27 (12) | C17—C16—H16A | 110.2 |
C1—N1—H1A | 109.8 | N15—C16—H16B | 110.2 |
Co1—N1—H1A | 109.8 | C17—C16—H16B | 110.2 |
C1—N1—H1B | 109.8 | H16A—C16—H16B | 108.5 |
Co1—N1—H1B | 109.8 | N18—C17—C16 | 106.78 (17) |
H1A—N1—H1B | 108.3 | N18—C17—H17A | 110.4 |
C2—O1—Co1 | 115.84 (13) | C16—C17—H17A | 110.4 |
C4—O4—C5 | 116.99 (17) | N18—C17—H17B | 110.4 |
N1—C1—C3 | 113.65 (16) | C16—C17—H17B | 110.4 |
N1—C1—C2 | 109.90 (15) | H17A—C17—H17B | 108.6 |
C3—C1—C2 | 114.89 (16) | C17—N18—Co1 | 109.09 (13) |
N1—C1—H1 | 105.9 | C17—N18—H18A | 109.9 |
C3—C1—H1 | 105.9 | Co1—N18—H18A | 109.9 |
C2—C1—H1 | 105.9 | C17—N18—H18B | 109.9 |
O2—C2—O1 | 123.61 (19) | Co1—N18—H18B | 109.9 |
O2—C2—C1 | 120.62 (17) | H18A—N18—H18B | 108.3 |
O1—C2—C1 | 115.57 (17) | O14—Cl1—O12 | 109.68 (16) |
C4—C3—C1 | 113.76 (16) | O14—Cl1—O11 | 109.97 (12) |
C4—C3—H3A | 108.8 | O12—Cl1—O11 | 110.55 (11) |
C1—C3—H3A | 108.8 | O14—Cl1—O13 | 109.15 (12) |
C4—C3—H3B | 108.8 | O12—Cl1—O13 | 108.43 (11) |
C1—C3—H3B | 108.8 | O11—Cl1—O13 | 109.01 (9) |
H3A—C3—H3B | 107.7 | O21—Cl2—O21i | 111.27 (16) |
O3—C4—O4 | 124.49 (19) | O21—Cl2—O22 | 108.51 (11) |
O3—C4—C3 | 124.70 (18) | O21i—Cl2—O22 | 108.89 (11) |
O4—C4—C3 | 110.81 (17) | O21—Cl2—O22i | 108.89 (11) |
O4—C5—C6 | 110.1 (2) | O21i—Cl2—O22i | 108.51 (11) |
O4—C5—H5A | 109.6 | O22—Cl2—O22i | 110.78 (17) |
C6—C5—H5A | 109.6 | O31X—Cl3—O31Xi | 80.6 (9) |
O4—C5—H5B | 109.6 | O31X—Cl3—O32i | 116.5 (8) |
C6—C5—H5B | 109.6 | O31Xi—Cl3—O32i | 96.9 (4) |
H5A—C5—H5B | 108.2 | O31X—Cl3—O32 | 96.9 (4) |
C5—C6—H6A | 109.5 | O31Xi—Cl3—O32 | 116.5 (8) |
C5—C6—H6B | 109.5 | O32i—Cl3—O32 | 136.4 (9) |
H6A—C6—H6B | 109.5 | O31X—Cl3—O32Xi | 144.2 (8) |
C5—C6—H6C | 109.5 | O31Xi—Cl3—O32Xi | 111.2 (6) |
H6A—C6—H6C | 109.5 | O32—Cl3—O32Xi | 106.4 (9) |
H6B—C6—H6C | 109.5 | O31X—Cl3—O32X | 111.2 (6) |
C12—N11—Co1 | 110.10 (13) | O31Xi—Cl3—O32X | 144.2 (8) |
C12—N11—H11A | 109.6 | O32i—Cl3—O32X | 106.4 (9) |
Co1—N11—H11A | 109.6 | O32—Cl3—O32X | 31.5 (3) |
C12—N11—H11B | 109.6 | O32Xi—Cl3—O32X | 79.5 (11) |
Co1—N11—H11B | 109.6 | O31Xi—Cl3—O31 | 106.5 (7) |
H11A—N11—H11B | 108.2 | O32i—Cl3—O31 | 86.7 (6) |
N11—C12—C13 | 105.81 (17) | O32—Cl3—O31 | 107.8 (3) |
N11—C12—H12A | 110.6 | O32Xi—Cl3—O31 | 108.2 (6) |
C13—C12—H12A | 110.6 | O32X—Cl3—O31 | 101.8 (4) |
N11—C12—H12B | 110.6 | O31X—Cl3—O31i | 106.5 (7) |
C13—C12—H12B | 110.6 | O32i—Cl3—O31i | 107.8 (3) |
H12A—C12—H12B | 108.7 | O32—Cl3—O31i | 86.7 (6) |
N14—C13—C12 | 106.97 (17) | O32Xi—Cl3—O31i | 101.8 (4) |
N14—C13—H13A | 110.3 | O32X—Cl3—O31i | 108.2 (6) |
C12—C13—H13A | 110.3 | O31—Cl3—O31i | 140.8 (6) |
N14—C13—H13B | 110.3 | H10A—O10—H10B | 104 (3) |
C12—C13—H13B | 110.3 | | |
Symmetry code: (i) y, x, −z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O2ii | 0.92 | 2.19 | 2.979 (2) | 144 |
N1—H1A···O12iii | 0.92 | 2.51 | 3.034 (3) | 117 |
N1—H1B···O13 | 0.92 | 2.39 | 3.124 (2) | 137 |
N1—H1B···O3 | 0.92 | 2.42 | 2.969 (2) | 119 |
N11—H11A···O11iv | 0.92 | 2.20 | 3.040 (2) | 151 |
N11—H11A···O3 | 0.92 | 2.48 | 3.007 (2) | 117 |
N11—H11B···O13 | 0.92 | 2.20 | 3.054 (2) | 154 |
N11—H11B···O12 | 0.92 | 2.35 | 3.133 (3) | 143 |
N14—H14A···O22 | 0.92 | 2.12 | 3.034 (2) | 171 |
N14—H14B···O10 | 0.92 | 2.19 | 2.979 (3) | 143 |
N15—H15A···O21 | 0.92 | 2.30 | 3.151 (3) | 153 |
N15—H15A···O22 | 0.92 | 2.34 | 3.129 (3) | 143 |
N15—H15B···O13 | 0.92 | 2.13 | 2.982 (2) | 153 |
N18—H18A···O2ii | 0.92 | 2.12 | 2.931 (2) | 146 |
N18—H18A···O11v | 0.92 | 2.55 | 3.164 (2) | 124 |
N18—H18B···O10 | 0.92 | 2.36 | 3.151 (3) | 145 |
O10—H10A···O32 | 0.80 (2) | 2.25 (2) | 2.944 (6) | 146 (3) |
O10—H10B···O14v | 0.81 (2) | 2.56 (3) | 3.004 (3) | 116 (3) |
Symmetry codes: (ii) x−1/2, −y+3/2, −z+1/4; (iii) x−1/2, −y+1/2, −z+1/4; (iv) x+1/2, −y+1/2, −z+1/4; (v) x, y+1, z. |
Experimental details
| (I) | (II) |
Crystal data |
Chemical formula | [Co(C6H10N2O4)(C2H8N2)2](ClO4)2·H2O | [Co(C6H10N2O4)(C2H8N2)2](ClO4)2·H2O |
Mr | 556.20 | 556.20 |
Crystal system, space group | Monoclinic, P21 | Tetragonal, P43212 |
Temperature (K) | 298 | 122 |
a, b, c (Å) | 11.6507 (4), 8.7600 (5), 11.7169 (6) | 9.2898 (3), 9.2898 (3), 48.9696 (14) |
α, β, γ (°) | 90, 113.572 (4), 90 | 90, 90, 90 |
V (Å3) | 1096.04 (9) | 4226.1 (2) |
Z | 2 | 8 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 1.10 | 1.14 |
Crystal size (mm) | 0.35 × 0.14 × 0.13 | 0.20 × 0.19 × 0.07 |
|
Data collection |
Diffractometer | Nonius KappaCCD area-detector diffractometer | Nonius KappaCCD area-detector diffractometer |
Absorption correction | Integration (Gaussian integration; Coppens, 1970) | Integration (Gaussian integration; Coppens, 1970) |
Tmin, Tmax | 0.675, 0.898 | 0.810, 0.924 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 31975, 4996, 4684 | 84126, 4818, 4583 |
Rint | 0.033 | 0.055 |
(sin θ/λ)max (Å−1) | 0.649 | 0.649 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.139, 1.05 | 0.026, 0.064, 1.05 |
No. of reflections | 4996 | 4818 |
No. of parameters | 285 | 302 |
No. of restraints | 161 | 5 |
H-atom treatment | H-atom parameters constrained | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.57, −0.36 | 0.55, −0.87 |
Absolute structure | Flack (1983), 2329 Friedel pairs | Flack (1983), with 1893 Friedel pairs |
Absolute structure parameter | 0.01 (2) | −0.017 (11) |
Selected bond lengths (Å) for (I) topCo1—O1 | 1.883 (3) | O2—C2 | 1.231 (5) |
Co1—N1 | 1.960 (3) | O3—C4 | 1.176 (8) |
Co1—N11 | 1.959 (4) | C1—C2 | 1.511 (6) |
Co1—N14 | 1.957 (4) | C1—C3 | 1.525 (6) |
Co1—N15 | 1.957 (3) | C3—C4 | 1.481 (7) |
Co1—N18 | 1.969 (3) | C4—O4 | 1.330 (7) |
N1—C1 | 1.485 (6) | O4—C5 | 1.480 (13) |
O1—C2 | 1.294 (5) | C5—C6 | 1.516 (5) |
Hydrogen-bond geometry (Å, º) for (I) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1B···O3 | 0.90 | 2.36 | 2.909 (5) | 119 |
N1—H1A···O10 | 0.90 | 2.38 | 3.205 (7) | 152 |
N1—H1B···O22 | 0.90 | 2.29 | 3.147 (14) | 160 |
N1—H1B···O21A | 0.90 | 2.64 | 3.10 (2) | 113 |
N11—H11A···O2i | 0.90 | 2.13 | 2.985 (5) | 158 |
N11—H11B···O3 | 0.90 | 2.15 | 3.013 (6) | 160 |
N14—H14A···O10 | 0.90 | 2.24 | 3.099 (8) | 159 |
N15—H15A···O2i | 0.90 | 2.03 | 2.880 (5) | 157 |
N15—H15B···O11ii | 0.90 | 2.32 | 3.127 (6) | 149 |
N18—H18B···O12iii | 0.90 | 2.21 | 3.113 (7) | 176 |
O10—H10A···O14 | 0.860 | 2.17 | 3.017 (15) | 173 |
O10—H10A···O14A | 0.860 | 1.95 | 2.778 (19) | 165 |
O10—H10B···O23iv | 0.860 | 2.16 | 3.01 (2) | 173 |
O10—H10B···O22Aiv | 0.860 | 2.40 | 2.99 (2) | 127 |
Symmetry codes: (i) −x+1, y−1/2, −z+2; (ii) −x+1, y−1/2, −z+1; (iii) −x+1, y+1/2, −z+1; (iv) −x, y+1/2, −z+1. |
Selected bond lengths (Å) for (II) topCo1—O1 | 1.8948 (14) | O2—C2 | 1.234 (2) |
Co1—N1 | 1.9552 (16) | O3—C4 | 1.206 (3) |
Co1—N11 | 1.9586 (17) | C1—C2 | 1.521 (3) |
Co1—N14 | 1.9655 (17) | C1—C3 | 1.519 (3) |
Co1—N15 | 1.9600 (17) | C3—C4 | 1.503 (3) |
Co1—N18 | 1.9575 (18) | O4—C4 | 1.338 (2) |
N1—C1 | 1.488 (2) | O4—C5 | 1.455 (3) |
O1—C2 | 1.296 (2) | C5—C6 | 1.496 (4) |
Hydrogen-bond geometry (Å, º) for (II) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O2i | 0.92 | 2.19 | 2.979 (2) | 144 |
N1—H1A···O12ii | 0.92 | 2.51 | 3.034 (3) | 117 |
N1—H1B···O13 | 0.92 | 2.39 | 3.124 (2) | 137 |
N1—H1B···O3 | 0.92 | 2.42 | 2.969 (2) | 119 |
N11—H11A···O11iii | 0.92 | 2.20 | 3.040 (2) | 151 |
N11—H11A···O3 | 0.92 | 2.48 | 3.007 (2) | 117 |
N11—H11B···O13 | 0.92 | 2.20 | 3.054 (2) | 154 |
N11—H11B···O12 | 0.92 | 2.35 | 3.133 (3) | 143 |
N14—H14A···O22 | 0.92 | 2.12 | 3.034 (2) | 171 |
N14—H14B···O10 | 0.92 | 2.19 | 2.979 (3) | 143 |
N15—H15A···O21 | 0.92 | 2.30 | 3.151 (3) | 153 |
N15—H15A···O22 | 0.92 | 2.34 | 3.129 (3) | 143 |
N15—H15B···O13 | 0.92 | 2.13 | 2.982 (2) | 153 |
N18—H18A···O2i | 0.92 | 2.12 | 2.931 (2) | 146 |
N18—H18A···O11iv | 0.92 | 2.55 | 3.164 (2) | 124 |
N18—H18B···O10 | 0.92 | 2.36 | 3.151 (3) | 145 |
O10—H10A···O32 | 0.802 (18) | 2.25 (2) | 2.944 (6) | 146 (3) |
O10—H10B···O14iv | 0.814 (18) | 2.56 (3) | 3.004 (3) | 116 (3) |
Symmetry codes: (i) x−1/2, −y+3/2, −z+1/4; (ii) x−1/2, −y+1/2, −z+1/4; (iii) x+1/2, −y+1/2, −z+1/4; (iv) x, y+1, z. |
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Octahedral Δ/Λ-bis(ethane-1,2-diamine)[(R/S)-α-amino acidato-N,O]cobalt(III) complexes typically comprise two stereogenic centres, the metal and the α-C atom of the amino acid. The diastereoisomeric equilibrium ratio, Kc = [(Δ-S,Λ-R)]/[(Δ-R,Λ-S)], has been determined in 0.010 M NaOH at 298 K for a number of such systems, and values vary with the coordinated amino acid: 0.67 (3) for Asp, 0.77 (2) (A2pr), 0.85 (3) (Glu), 1.00 (2) (Ala), 1.2 (1) (Phe), 1.9 (1) (Val) (A2pr is 2,3-diaminopropanoic acid; Buckingham et al., 1990; Barfod et al., 1999). Even though these values evince modest levels of selectivity, it is notable that Kc < 1 only for those systems which carry side chains with potential hydrogen-bond acceptor sites. Thus, in these instances the (Δ-R,Λ-S) diastereoisomer is preferred over the (Δ-S,Λ-R) diastereoisomer, whereas the opposite preference applies for systems with bulky apolar side chains. Clearly, such preferences (in solution) are governed to a large extent by a number of intramolecular interactions, but at present it is unclear which interactions are decisive in determining these preferences. Crystal structures of relevant complexes, for example Λ(+)495-[Co(en)2{S-Glu(O-)O}]ClO4 (Gillard et al., 1970), Λ(+)578-[Co(en)2{S-Asp(OH)O}](ClO4)2 (Barfod et al., 1999) and rac-(Δ-R,Λ-S)-\[Co(en)2{O2CCH(CH[CO2Et]2)NH2}](ClO4)2 (Bendahl et al., 2002), reveal firm intramolecular hydrogen-bonding interactions from coordinated ligand amine groups to side-chain acceptor sites. However, in the structure of the asparagine complex, Λ-[Co(en)2(S-AsnO)]I1.6(NO3)0.4, the amino acid side chain is not engaged in intramolecular hydrogen bonding with coordinated ethane-1,2-diamine (Keyes et al., 1976). These structures each represent only one of two possible diastereoisomers and, incidentally, this is the thermodynamically favoured diastereoisomer (Δ-R,Λ-S) in all four instances. Investigations aimed at elucidating the origins of the stability preferences observed in solution for such systems through structural comparison of both diastereoisomers have not yet been published.
The title β-ethyl-(S)-aspartate complexes, (I), Λ-form, and (II), Δ-form, constitute such a diastereoisomeric pair. The crystals of (I) and (II) are constitutionally identical, thus providing an optimal basis for comparison. The two structures are illustrated in Figs. 1 and 2, respectively, and selected interatomic distances are given in Tables 1 and 3.
Both structures are characterized by extensive three-dimensional hydrogen-bonding networks (Tables 2 and 4), the only hydrogen-bond donors being the coordinated primary amine groups and the water molecules. The amino acid side chain carries only one hydrogen-bond acceptor, namely the ester carbonyl-O atom, but this is not engaged in intermolecular hydrogen bonding. Thus, it is noteworthy that in both structures the ester carbonyl-O atoms are only intramolecularly hydrogen-bonded to the amine group of the amino acid ligand and to the nearest amine group of one ethane-1,2-diamine ligand (Fig. 3). The interaction of the ester carbonyl with the amine of the amino acid ligand results in similar N1···O3 distances in both structures, but the two structures differ with respect to the intramolecular hydrogen-bonding to the nearest ethane-1,2-diamine ligand. Whereas the N11···O3(carbonyl) distances are identical in the two structures, the associated H11···O3 distances are notably different [in (I), H11B···O3 = 2.15 Å; in (II), H11A···O3 = 2.48 Å]. From Fig. 3(a) it is evident that the ethane-1,2-diamine chelate is optimally positioned relative to the amino acid ligand, pointing the N11—H11B bond almost directly towards the ester carbonyl atom O3, allowing the shorter, almost linear, hydrogen bond, consistent with a stronger interaction (Jeffrey, 1997). This is a consequence of the (Λ-S) relative absolute configuration of the complex of this structure. By contrast, in (II), the (Δ-S) relative configuration (Fig. 3b), neither of the relevant ethane-1,2-diamine N11—H11 bonds points directly towards the ester carbonyl-O atom in a manner similar to the situation for (I). This supports the notion that (I) displays the stronger interaction.
Even though the diastereoisomeric equilibrium ratio has not been determined in water for the two molecular diastereoisomers of this study (the ester would hydrolyse in the basic conditions required for attaining equilibrium), the observed structural features implying (I) to be the more stable diastereoisomer correlate with the stereochemical preferences observed in aqueous equilibrium studies of complexes bearing polar side chains, as outlined in the introduction (Buckingham et al., 1990; Barfod et al., 1999). The decisive hydrogen-bonding interactions of the amino acid side chains of (I) and (II) are all intramolecular and evidently not much governed by the `intermolecular' situation within the crystal structure. Thus, the present structures may serve to identify the likely decisive interaction governing the generally observed preferences in solution in the case of similar amino acid complexes with hydrogen-bond accepting side chains. The fact that amino acid complexes with nonpolar side chains display the opposite diastereoisomer stability preference remains unexplained, but since they lack hydrogen-bond acceptors in the side chains, weaker interactions must apply in these instances.
The insight provided by the present study is important for future application of the cis-bis(ethane-1,2-diamine)cobalt(III) moiety as a `chiral handle' in stereoselective syntheses of amino acids (Hammershøi et al., 1984; Curtis et al., 1987; Drok et al., 1993; Bendahl et al., 1996, 2002; Laval et al., 2002).