Download citation
Download citation
link to html
By the solvothermal reaction under acidic conditions of Cu(NO3)2·3H2O, Na2C2O4 and the N,N′-ditopic organic coligands 1-(pyridin-4-yl)piperazine (ppz) and 1,2-bis­(pyridin-4-yl)ethane (bpa), two novel anionic copper(II) coordination compounds were obtained, namely the one-dimensional coordination polymer catena-poly[4-(pyridin-1-ium-4-yl)piperazin-1-ium [[(oxalato-κ2O1,O2)copper(II)]-μ-oxalato-κ3O1,O2:O1′]], {(C9H15N3)[Cu(C2O4)2)]}n or {(H2ppz)[Cu(C2O4)2]}n, (I), and the discrete ionic complex 4,4′-(ethane-1,2-di­yl)di­pyridinium bis­(oxalato-κ2O1,O2)copper(II), (C12H14N2)[Cu(C2O4)2] or (H2bpa)[Cu(C2O4)2], (II). The products were characterized by single-crystal X-ray diffraction, elemental analysis, powder X-ray diffraction, thermogravimetric analyses and UV and IR spectroscopic techniques. The [Cu(C2O4)2]2− units for (I) and (II) are stabilized by H2ppz2+ and H2bpa2+ cations, respectively, via charge-assisted hydrogen bonds. Also, a study of the pH-controlled synthesis of this system shows that (I) was obtained at pH values of 2–4. When using bpa, a two-dimensional square-grid network of [Cu(C2O4)(bpa)]n was obtained at a pH of 4. This indicates that the pH of the reaction also plays a key role in the structural assembly and coordination abilities of oxalate and N,N′-ditopic coligands.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S2053229618002024/ku3215sup1.cif
Contains datablocks compoundI, compoundII, global

pdf

Portable Document Format (PDF) file https://doi.org/10.1107/S2053229618002024/ku3215sup3.pdf
TGA and PXRD spectra for (I) and (II)

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2053229618002024/ku3215compoundIsup4.hkl
Contains datablock compoundI

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2053229618002024/ku3215compoundIIsup5.hkl
Contains datablock compoundII

CCDC references: 1821649; 1821648

Computing details top

For both structures, data collection: APEX2 (Bruker, 2013); cell refinement: SAINT (Bruker, 2013); data reduction: SAINT (Bruker, 2013); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: SHELXL (Sheldrick, 2008); software used to prepare material for publication: SHELXL (Sheldrick, 2008).

(compoundI) top
Crystal data top
(C9H15N3)[Cu(C2O4)2]F(000) = 828
Mr = 404.82Dx = 1.866 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 10.8492 (7) ÅCell parameters from 3578 reflections
b = 14.2931 (7) Åθ = 2.8–26.1°
c = 9.8604 (5) ŵ = 1.57 mm1
β = 109.543 (2)°T = 298 K
V = 1440.95 (14) Å3Block, blue
Z = 40.09 × 0.04 × 0.03 mm
Data collection top
Bruker D8 QUEST PHOTON 100
diffractometer
1975 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.075
φ and ω scansθmax = 26.4°, θmin = 2.8°
Absorption correction: multi-scan
(SADABS; Bruker, 2015)
h = 1313
Tmin = 0.698, Tmax = 0.745k = 1717
16649 measured reflectionsl = 1112
2940 independent reflections
Refinement top
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.044H-atom parameters constrained
wR(F2) = 0.099 w = 1/[σ2(Fo2) + (0.0437P)2 + 0.8867P]
where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
2940 reflectionsΔρmax = 0.38 e Å3
226 parametersΔρmin = 0.53 e Å3
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Cu10.09599 (4)0.33925 (3)0.09871 (4)0.02876 (16)
O10.2621 (2)0.38727 (18)0.2210 (2)0.0341 (6)
O20.0825 (2)0.28723 (18)0.2768 (2)0.0323 (6)
O30.1877 (2)0.2978 (2)0.5141 (2)0.0401 (7)
O40.3686 (2)0.41202 (18)0.4525 (2)0.0388 (7)
O50.0981 (2)0.41985 (19)0.0589 (2)0.0403 (7)
O60.0328 (3)0.4559 (2)0.2808 (3)0.0556 (9)
O70.2078 (2)0.32768 (18)0.2495 (2)0.0336 (6)
O80.0797 (2)0.30645 (17)0.0221 (2)0.0279 (6)
N10.7960 (3)0.3676 (2)0.4723 (3)0.0253 (7)
H1A0.82510.31020.46540.030*
H1B0.82990.38590.56350.030*
N20.6386 (3)0.39167 (19)0.1755 (3)0.0212 (6)
N30.4296 (3)0.3887 (2)0.2589 (3)0.0300 (7)
H30.38750.38600.34980.036*
C10.2777 (3)0.3786 (3)0.3551 (3)0.0247 (8)
C20.1728 (3)0.3167 (2)0.3880 (4)0.0268 (8)
C30.0075 (4)0.4131 (3)0.1673 (4)0.0318 (9)
C40.1085 (3)0.3434 (2)0.1486 (4)0.0248 (8)
C50.8386 (3)0.4323 (3)0.3789 (3)0.0285 (8)
H5A0.93330.43160.40750.034*
H5B0.81140.49550.39090.034*
C60.7807 (3)0.4041 (3)0.2228 (3)0.0276 (8)
H6A0.80150.45170.16370.033*
H6B0.82080.34600.20820.033*
C70.5903 (3)0.3366 (2)0.2739 (3)0.0253 (8)
H7A0.60900.27100.26520.030*
H7B0.49610.34370.24560.030*
C80.6517 (3)0.3663 (3)0.4290 (3)0.0263 (8)
H8A0.62060.42830.44160.032*
H8B0.62530.32340.49040.032*
C90.5496 (4)0.4250 (2)0.2129 (4)0.0294 (9)
H90.58490.44950.27920.035*
C100.6212 (3)0.4269 (2)0.0704 (3)0.0257 (8)
H100.70510.45200.04030.031*
C110.5688 (3)0.3909 (2)0.0324 (3)0.0213 (8)
C120.4395 (3)0.3562 (2)0.0223 (4)0.0302 (9)
H120.39920.33330.04060.036*
C130.3735 (4)0.3562 (2)0.1666 (4)0.0328 (9)
H130.28840.33340.20130.039*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Cu10.0222 (3)0.0441 (3)0.0159 (2)0.0088 (2)0.00100 (17)0.0042 (2)
O10.0259 (14)0.0556 (17)0.0180 (13)0.0145 (12)0.0034 (11)0.0018 (12)
O20.0238 (14)0.0509 (17)0.0184 (12)0.0092 (12)0.0021 (11)0.0042 (12)
O30.0388 (16)0.0619 (19)0.0184 (13)0.0122 (14)0.0079 (12)0.0008 (12)
O40.0367 (16)0.0547 (17)0.0182 (13)0.0153 (13)0.0003 (12)0.0034 (12)
O50.0340 (16)0.0581 (18)0.0212 (13)0.0214 (13)0.0010 (12)0.0062 (12)
O60.057 (2)0.071 (2)0.0251 (15)0.0309 (16)0.0048 (13)0.0184 (15)
O70.0211 (14)0.0534 (17)0.0211 (13)0.0067 (12)0.0002 (11)0.0041 (12)
O80.0235 (13)0.0408 (14)0.0166 (12)0.0089 (11)0.0033 (10)0.0059 (11)
N10.0273 (17)0.0320 (17)0.0151 (14)0.0023 (13)0.0053 (12)0.0018 (12)
N20.0173 (15)0.0288 (16)0.0164 (14)0.0041 (12)0.0042 (12)0.0007 (12)
N30.036 (2)0.0321 (18)0.0144 (15)0.0054 (15)0.0015 (13)0.0006 (13)
C10.0170 (19)0.036 (2)0.0191 (18)0.0019 (15)0.0030 (15)0.0011 (16)
C20.027 (2)0.033 (2)0.0186 (18)0.0064 (16)0.0056 (15)0.0013 (16)
C30.033 (2)0.039 (2)0.0216 (19)0.0078 (17)0.0070 (17)0.0032 (17)
C40.0190 (19)0.034 (2)0.0215 (17)0.0018 (16)0.0077 (15)0.0014 (16)
C50.023 (2)0.035 (2)0.0215 (18)0.0069 (16)0.0007 (15)0.0022 (16)
C60.022 (2)0.038 (2)0.0218 (18)0.0069 (16)0.0063 (15)0.0023 (16)
C70.0217 (19)0.033 (2)0.0195 (17)0.0055 (16)0.0051 (14)0.0009 (16)
C80.026 (2)0.034 (2)0.0198 (18)0.0022 (16)0.0095 (15)0.0049 (15)
C90.034 (2)0.034 (2)0.0217 (18)0.0071 (17)0.0122 (17)0.0036 (16)
C100.024 (2)0.033 (2)0.0180 (18)0.0038 (16)0.0046 (15)0.0007 (15)
C110.027 (2)0.0179 (18)0.0175 (17)0.0023 (15)0.0056 (14)0.0010 (14)
C120.029 (2)0.036 (2)0.0210 (19)0.0055 (17)0.0011 (16)0.0023 (16)
C130.031 (2)0.029 (2)0.030 (2)0.0055 (17)0.0007 (17)0.0008 (17)
Geometric parameters (Å, º) top
Cu1—O11.928 (2)N3—H30.8600
Cu1—O81.938 (2)C1—C21.559 (5)
Cu1—O51.941 (2)C3—C41.537 (5)
Cu1—O21.957 (2)C5—C61.509 (4)
Cu1—O3i2.466 (3)C5—H5A0.9700
O1—C11.282 (4)C5—H5B0.9700
O2—C21.273 (4)C6—H6A0.9700
O3—C21.229 (4)C6—H6B0.9700
O4—C11.220 (4)C7—C81.510 (4)
O5—C31.283 (4)C7—H7A0.9700
O6—C31.223 (4)C7—H7B0.9700
O7—C41.218 (4)C8—H8A0.9700
O8—C41.293 (4)C8—H8B0.9700
N1—C81.479 (4)C9—C101.360 (5)
N1—C51.484 (4)C9—H90.9300
N1—H1A0.8900C10—C111.414 (5)
N1—H1B0.8900C10—H100.9300
N2—C111.360 (4)C11—C121.414 (5)
N2—C61.465 (4)C12—C131.362 (5)
N2—C71.475 (4)C12—H120.9300
N3—C91.332 (5)C13—H130.9300
N3—C131.336 (5)
O1—Cu1—O8172.78 (11)N1—C5—H5A109.5
O1—Cu1—O591.74 (10)C6—C5—H5A109.5
O8—Cu1—O585.64 (9)N1—C5—H5B109.5
O1—Cu1—O284.78 (9)C6—C5—H5B109.5
O8—Cu1—O296.11 (9)H5A—C5—H5B108.0
O5—Cu1—O2165.58 (11)N2—C6—C5113.1 (3)
O3i—Cu1—O195.50 (9)N2—C6—H6A109.0
O3i—Cu1—O299.30 (9)C5—C6—H6A109.0
O3i—Cu1—O594.96 (9)N2—C6—H6B109.0
O3i—Cu1—O891.44 (9)C5—C6—H6B109.0
C1—O1—Cu1112.6 (2)H6A—C6—H6B107.8
C2—O2—Cu1112.3 (2)N2—C7—C8112.5 (3)
C3—O5—Cu1112.1 (2)N2—C7—H7A109.1
C4—O8—Cu1111.4 (2)C8—C7—H7A109.1
C8—N1—C5110.4 (3)N2—C7—H7B109.1
C8—N1—H1A109.6C8—C7—H7B109.1
C5—N1—H1A109.6H7A—C7—H7B107.8
C8—N1—H1B109.6N1—C8—C7111.2 (3)
C5—N1—H1B109.6N1—C8—H8A109.4
H1A—N1—H1B108.1C7—C8—H8A109.4
C11—N2—C6119.5 (3)N1—C8—H8B109.4
C11—N2—C7118.8 (3)C7—C8—H8B109.4
C6—N2—C7115.0 (2)H8A—C8—H8B108.0
C9—N3—C13121.3 (3)N3—C9—C10121.0 (3)
C9—N3—H3119.4N3—C9—H9119.5
C13—N3—H3119.4C10—C9—H9119.5
O4—C1—O1124.6 (3)C9—C10—C11120.4 (3)
O4—C1—C2120.8 (3)C9—C10—H10119.8
O1—C1—C2114.5 (3)C11—C10—H10119.8
O3—C2—O2127.0 (3)N2—C11—C12122.4 (3)
O3—C2—C1118.5 (3)N2—C11—C10121.5 (3)
O2—C2—C1114.5 (3)C12—C11—C10116.1 (3)
O6—C3—O5126.1 (3)C13—C12—C11120.4 (3)
O6—C3—C4118.9 (3)C13—C12—H12119.8
O5—C3—C4115.0 (3)C11—C12—H12119.8
O7—C4—O8125.1 (3)N3—C13—C12120.8 (4)
O7—C4—C3119.5 (3)N3—C13—H13119.6
O8—C4—C3115.4 (3)C12—C13—H13119.6
N1—C5—C6110.9 (3)
Symmetry code: (i) x, y+1/2, z1/2.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1B···O6ii0.892.012.819 (4)150
N1—H1B···O7ii0.892.182.816 (3)128
N3—H3···O3iii0.862.483.107 (4)131
N3—H3···O4iii0.861.932.718 (3)152
C5—H5A···O6iv0.972.493.048 (5)116
C6—H6A···O5iv0.972.533.478 (5)167
C6—H6B···O7v0.972.553.323 (5)136
C7—H7A···O7v0.972.483.272 (4)139
C7—H7B···O10.972.553.498 (4)167
C8—H8A···O4vi0.972.503.410 (5)157
C8—H8B···O7ii0.972.603.073 (3)110
Symmetry codes: (ii) x+1, y, z+1; (iii) x, y, z1; (iv) x+1, y+1, z; (v) x+1, y+1/2, z+1/2; (vi) x+1, y+1, z+1.
(compoundII) top
Crystal data top
(C12H14N2)[Cu(C2O4)2]Z = 1
Mr = 425.83F(000) = 217
Triclinic, P1Dx = 1.833 Mg m3
a = 3.8486 (1) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.2380 (3) ÅCell parameters from 5637 reflections
c = 10.6080 (4) Åθ = 3.5–26.2°
α = 109.382 (2)°µ = 1.47 mm1
β = 95.641 (2)°T = 298 K
γ = 97.930 (2)°Block, purple
V = 385.85 (2) Å30.09 × 0.04 × 0.03 mm
Data collection top
Bruker D8 QUEST PHOTON 100
diffractometer
1370 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.064
φ and ω scansθmax = 26.0°, θmin = 3.9°
Absorption correction: multi-scan
(SADABS; Bruker, 2015)
h = 44
Tmin = 0.481, Tmax = 0.745k = 1212
11134 measured reflectionsl = 1313
1515 independent reflections
Refinement top
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.033H-atom parameters constrained
wR(F2) = 0.087 w = 1/[σ2(Fo2) + (0.0423P)2 + 0.2752P]
where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
1515 reflectionsΔρmax = 0.41 e Å3
124 parametersΔρmin = 0.36 e Å3
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Cu10.00000.50000.00000.02811 (17)
O10.0783 (5)0.68107 (18)0.14009 (17)0.0323 (4)
O20.3594 (5)0.78730 (19)0.35205 (18)0.0358 (4)
O30.3273 (5)0.45021 (18)0.12059 (17)0.0338 (4)
O40.6076 (5)0.54334 (19)0.33262 (18)0.0355 (4)
N10.1332 (5)0.7665 (2)0.5689 (2)0.0281 (5)
H10.25030.71270.48880.034*
C10.2779 (6)0.6865 (2)0.2468 (2)0.0245 (5)
C20.4187 (6)0.5490 (3)0.2350 (2)0.0263 (5)
C30.0221 (7)0.7072 (3)0.6474 (3)0.0303 (6)
H30.00600.60780.61650.036*
C40.2072 (7)0.7888 (3)0.7739 (3)0.0284 (5)
H40.31630.74600.83030.034*
C50.2320 (6)0.9337 (3)0.8176 (2)0.0234 (5)
C60.0655 (6)0.9909 (3)0.7315 (3)0.0273 (5)
H60.07861.08990.75870.033*
C70.1169 (6)0.9054 (3)0.6079 (2)0.0286 (5)
H70.23210.94490.54970.034*
C80.4292 (6)1.0343 (3)0.9522 (2)0.0260 (5)
H8A0.26831.09640.99710.031*
H8B0.63101.09460.93580.031*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Cu10.0395 (3)0.0210 (2)0.0181 (2)0.00929 (18)0.00867 (17)0.00160 (17)
O10.0441 (10)0.0239 (9)0.0231 (9)0.0114 (8)0.0090 (8)0.0027 (7)
O20.0460 (11)0.0269 (9)0.0238 (9)0.0099 (8)0.0095 (8)0.0023 (7)
O30.0483 (11)0.0245 (9)0.0214 (9)0.0120 (8)0.0112 (8)0.0014 (7)
O40.0476 (11)0.0310 (10)0.0237 (9)0.0113 (8)0.0112 (8)0.0069 (8)
N10.0288 (11)0.0315 (12)0.0166 (10)0.0019 (9)0.0021 (8)0.0018 (9)
C10.0268 (12)0.0231 (12)0.0205 (12)0.0037 (9)0.0013 (9)0.0053 (10)
C20.0293 (12)0.0252 (12)0.0227 (12)0.0036 (10)0.0012 (10)0.0082 (10)
C30.0361 (14)0.0210 (12)0.0293 (13)0.0057 (10)0.0023 (11)0.0034 (10)
C40.0317 (13)0.0319 (13)0.0230 (12)0.0082 (10)0.0002 (10)0.0116 (10)
C50.0203 (11)0.0278 (12)0.0197 (12)0.0038 (9)0.0036 (9)0.0052 (10)
C60.0291 (12)0.0239 (12)0.0279 (13)0.0062 (10)0.0028 (10)0.0075 (10)
C70.0286 (12)0.0362 (14)0.0234 (12)0.0060 (10)0.0006 (10)0.0151 (11)
C80.0279 (12)0.0260 (12)0.0220 (12)0.0061 (10)0.0000 (10)0.0062 (10)
Geometric parameters (Å, º) top
Cu1—O1i1.9145 (16)C3—C41.382 (4)
Cu1—O11.9145 (16)C3—H30.9500
Cu1—O3i1.9431 (17)C4—C51.386 (4)
Cu1—O31.9432 (17)C4—H40.9500
O1—C11.285 (3)C5—C61.390 (3)
O2—C11.220 (3)C5—C81.506 (3)
O3—C21.274 (3)C6—C71.366 (4)
O4—C21.228 (3)C6—H60.9500
N1—C31.326 (3)C7—H70.9500
N1—C71.333 (3)C8—C8ii1.513 (5)
N1—H10.8800C8—H8A0.9900
C1—C21.548 (3)C8—H8B0.9900
O1i—Cu1—O1180.00 (11)C4—C3—H3119.8
O1i—Cu1—O3i85.73 (7)C3—C4—C5119.4 (2)
O1—Cu1—O3i94.27 (7)C3—C4—H4120.3
O1i—Cu1—O394.27 (7)C5—C4—H4120.3
O1—Cu1—O385.73 (7)C4—C5—C6118.0 (2)
O3i—Cu1—O3180.0C4—C5—C8124.6 (2)
C1—O1—Cu1112.67 (15)C6—C5—C8117.4 (2)
C2—O3—Cu1111.56 (15)C7—C6—C5120.3 (2)
C3—N1—C7121.9 (2)C7—C6—H6119.8
C3—N1—H1119.1C5—C6—H6119.8
C7—N1—H1119.1N1—C7—C6120.0 (2)
O2—C1—O1126.1 (2)N1—C7—H7120.0
O2—C1—C2119.5 (2)C6—C7—H7120.0
O1—C1—C2114.4 (2)C5—C8—C8ii115.2 (3)
O4—C2—O3125.5 (2)C5—C8—H8A108.5
O4—C2—C1119.2 (2)C8ii—C8—H8A108.5
O3—C2—C1115.4 (2)C5—C8—H8B108.5
N1—C3—C4120.4 (2)C8ii—C8—H8B108.5
N1—C3—H3119.8H8A—C8—H8B107.5
Symmetry codes: (i) x, y+1, z; (ii) x+1, y+2, z+2.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O2iii0.882.362.951 (3)125
N1—H1···O4iii0.881.922.753 (3)156
C3—H3···O4iv0.952.433.157 (4)133
C6—H6···O1v0.952.423.326 (4)159
Symmetry codes: (iii) x1, y, z; (iv) x+1, y+1, z+1; (v) x, y+2, z+1.
 

Follow Acta Cryst. C
Sign up for e-alerts
Follow Acta Cryst. on Twitter
Follow us on facebook
Sign up for RSS feeds