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High-temperature Raman spectroscopy has been applied to study in situ the microstructure of the solution near the β-BaB2O4 crystal–solution interface in the BaO–B2O3–Na2O growth system. A boundary layer near the crystal–solution interface was observed. In accordance with the high-temperature Raman spectroscopy and first principles calculations, a boron–oxygen structural model is proposed to explain the microstructure of the solution and growth habit. The results show that the growth solution contains a special group, [BO2ØBOØB=O]3− (Ø = bridging oxygen), which transformed to the growth unit [B3O6]3− near the interface.