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Crystal structure and spectroscopic properties of aqua­di­chlorido­{1,1′-[(pyridine-2,6-diyl-κN)bis­(methyl­ene)]bis­­(4-butyl-4,5-di­hydro-1H-1,2,4-triazole-5-thione-κN2)}cobalt(II)

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aDepartment of Chemistry and Biochemistry, Fairfield University, 1073 North Benson Road, Fairfield, CT 06824, USA, and bDepartment of Chemistry, Keene State College, 229 Main Street, Keene, NH 03435, USA
*Correspondence e-mail: jmiecznikowski@fairfield.edu, jjasinski@keene.edu

Edited by J. Reibenspies, Texas A & M University, USA (Received 14 September 2020; accepted 9 October 2020; online 16 October 2020)

The structure of the title compound, [CoCl2(C19H27N7S2)(H2O)], at 173 K has monoclinic (C2/c) symmetry. We report here the synthesis, single-crystal structure, electrospray mass spectrum and NMR spectroscopy of a new six-coordinate cobalt(II) pincer complex. The pincer ligand, in this complex, which is novel, coordinates via three nitro­gen atoms (two triazole and one pyridine). The ligand is ambidentate and can coordinate via three nitro­gen atoms or two sulfur and one nitro­gen atoms. The cobalt(II) metal center has pseudo-octa­hedral geometry and based on the single-crystal structure, the pincer ligand coordinates in a meridional fashion with the metal and adjacent six-membered ring ligands all in a similar plane and forming two slightly distorted boat configurations. The other two coordinated monodentate ligands are one water mol­ecule and two chloride ions with four cobalt(II) complexes in the unit cell. The asymmetric unit of the complex is comprised of half the pyridine ring and water mol­ecule with the CoII atom at the center of the pincer situated about a twofold axis. The Co—N, Co—O, and Co—Cl bond lengths are consistent with single bonds. In the crystal, the complex forms a three-centre bifurcated weak hydrogen-bonding inter­action with a chlorine ion, forming one inter­molecular inter­action with the pincer group and a water mol­ecule and a second intra­molecular inter­action with a C—H group within the pincer group. Crystal packing is also highlighted with C22(6)>a<a infinite chains forming along [001] supported by R22(8)>a>a ring motifs, forming a three-dimensional supra­molecular network structure. While some stacking of the pyridine rings in the unit cell is observed, there are no relevant ππ inter­actions in the crystal packing. The 1H and 13C{1H} NMR spectra of the complex are consistent with a plane of symmetry being present. The electrospray mass spectrum, which was collected in positive ion mode, showed the loss of one water mol­ecule and one chloride ligand from the complex. In the future, we plan to screen this cobalt(II) complex for electrocatalysis reactivity.

1. Chemical context

Pincer ligands are tridentate ligands that coordinate to metal centers either in a meridional or facial manner (Peris & Crabtree, 2018[Peris, E. & Crabtree, R. H. (2018). Chem. Soc. Rev. 47, 1959-1968.]; Gunanathan & Milstein, 2014[Gunanathan, C. & Milstein, D. (2014). Chem. Rev. 114, 12024-12087.]). The resulting pincer complexes are robust and have been utilized as catalysts in a variety of reactions (Szabó & Wendt, 2014[Szabó, K. J. & Wendt, O. F. (2014). Editors. Pincer and Pincer-Type Complexes Applications in Organic Synthesis and Catalysis. Weinheim: Wiley VCH.]). Pincer complexes can be prepared using a wide range of metal centers. The donor atoms of the pincer ligand to the metal can be carbon, oxygen, nitro­gen, phospho­rous, or sulfur (Peris & Crabtree, 2018[Peris, E. & Crabtree, R. H. (2018). Chem. Soc. Rev. 47, 1959-1968.]). Pincer ligand precursors can be tuned electronically by including electron-withdrawing or electron-donating groups, and sterically by including bulky substituents (van Koten & Milstein, 2013[Koten, G. van & Milstein, D. (2013). Editors. Organometallic Pincer Chemistry. Berlin: Springer.]; van Koten & Gossage, 2015[Koten, G. van & Gossage, R. A. (2015). Editors. The Privileged Pincer-Metal Platform: Coordination Chemistry & Applications. Berlin: Springer.]). Previously, Miecznikowski and co-workers prepared tridentate pincer ligand precursors with sulfur, nitro­gen and sulfur donor atoms (Miecznikowski et al., 2011[Miecznikowski, J. R., Lo, W., Lynn, M. A., O'Loughlin, B. E., DiMarzio, A. P., Martinez, A. M., Lampe, L., Foley, K. M., Keilich, L. C., Lisi, G. P., Kwiecien, D. J., Pires, C. M., Kelly, W. J., Kloczko, N. F. & Morio, K. N. (2011). Inorg. Chim. Acta, 376, 515-524.], 2012[Miecznikowski, J. R., Lo, W., Lynn, M. A., Jain, S., Keilich, L. C., Kloczko, N. F., O'Loughlin, B. E., DiMarzio, A. P., Foley, K. M., Lisi, G. P., Kwiecien, D. J., Butrick, E. E., Powers, E. & Al-Abbasee, R. (2012). Inorg. Chim. Acta, 387, 25-36.]) (Fig. 1[link]). The pincer ligand precursors were metallated with zinc(II)chloride in order to prepare zinc(II) model complexes of liver alcohol de­hydrogenase (Miecznikowski et al., 2011[Miecznikowski, J. R., Lo, W., Lynn, M. A., O'Loughlin, B. E., DiMarzio, A. P., Martinez, A. M., Lampe, L., Foley, K. M., Keilich, L. C., Lisi, G. P., Kwiecien, D. J., Pires, C. M., Kelly, W. J., Kloczko, N. F. & Morio, K. N. (2011). Inorg. Chim. Acta, 376, 515-524.], 2012[Miecznikowski, J. R., Lo, W., Lynn, M. A., Jain, S., Keilich, L. C., Kloczko, N. F., O'Loughlin, B. E., DiMarzio, A. P., Foley, K. M., Lisi, G. P., Kwiecien, D. J., Butrick, E. E., Powers, E. & Al-Abbasee, R. (2012). Inorg. Chim. Acta, 387, 25-36.]) (see reaction scheme below). In 2012, Miecznikowski and co-workers reported the preparation of a pincer ligand precursor based on a bis-triazole starting material that could coordinate via sulfur, nitro­gen, and sulfur donor atoms or via three nitro­gen donor atoms (Miecznikowski et al., 2012[Miecznikowski, J. R., Lo, W., Lynn, M. A., Jain, S., Keilich, L. C., Kloczko, N. F., O'Loughlin, B. E., DiMarzio, A. P., Foley, K. M., Lisi, G. P., Kwiecien, D. J., Butrick, E. E., Powers, E. & Al-Abbasee, R. (2012). Inorg. Chim. Acta, 387, 25-36.]). It was reported that the novel ambidentate tridentate pincer ligand precursor was metallated with ZnCl2 to give a new tridentate NNN-bound pincer zinc(II) pincer complex: di­chloro­(η3-N,N,N)-[2,6-bis­(3-[N-but­yl]triazol-5-thione-1-yl)]pyridine­zinc(II), [(NNN)ZnCl2] (Fig. 1[link]).

[Scheme 1]
[Figure 1]
Figure 1
SNS ligand precursors prepared by Miecznikowski et al. (2011[Miecznikowski, J. R., Lo, W., Lynn, M. A., O'Loughlin, B. E., DiMarzio, A. P., Martinez, A. M., Lampe, L., Foley, K. M., Keilich, L. C., Lisi, G. P., Kwiecien, D. J., Pires, C. M., Kelly, W. J., Kloczko, N. F. & Morio, K. N. (2011). Inorg. Chim. Acta, 376, 515-524.], 2012[Miecznikowski, J. R., Lo, W., Lynn, M. A., Jain, S., Keilich, L. C., Kloczko, N. F., O'Loughlin, B. E., DiMarzio, A. P., Foley, K. M., Lisi, G. P., Kwiecien, D. J., Butrick, E. E., Powers, E. & Al-Abbasee, R. (2012). Inorg. Chim. Acta, 387, 25-36.]).

In this study, our aim was to prepare a cobalt(II) pincer complex that contained a pincer ligand precursor with methyl­ene moieties connecting each triazole substituent to the pyridine in the pincer ligand precursor (Fig. 2[link]). We wondered if the cobalt(II) metal center would coordinate to the pincer ligand via three nitro­gen atoms as observed for the zinc(II) complex or via sulfur, nitro­gen, and sulfur donor atoms. In this communication, we report the preparation, spectroscopic characterization, electrospray mass spectrometry, and single crystal structure of a cobalt(II) pincer complex that contains an ambidentate ligand (Fig. 2[link]).

[Figure 2]
Figure 2
Structure of the ambidentate pincer ligand precursor.

2. Structural commentary

We report here the synthesis, single crystal structure, electrospray mass spectrum and NMR spectroscopy of a new six-coordinate cobalt(II) pincer complex, C19H29Cl2CoN7OS2, at 173 K whose structure has monoclinic (C2/c) symmetry (Fig. 3[link]). The pincer ligand, in this complex, which is novel, coordinates via three nitro­gen atoms (two triazole and one pyridine). The ligand is ambidentate and can coordinate via three nitro­gen atoms or two sulfur and one nitro­gen atom. The cobalt(II) metal center has a pseudo-octa­hedral geometry and based on the single crystal structure, the pincer ligand coordinates in a meridional fashion with the metal and adjacent six-membered ring ligands all in a similar plane and forming two slightly distorted boat configurations [Co1/N2/N2/C3/C4/N4: Q1 = 0.743 (6) Å, θ = 89.9°, φ = 345.8 (5)°; Co1/N4/C4A/C3A/N2A/N1A (atoms with the suffix A are generated by the symmetry operation 1 − x, y, −z + [{1\over 2}]): Q2 = 0.743 (6) Å, θ = 90.1(5°, φ = 185.3 (5)°} (Cremer & Pople, 1975[Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354-1358.]). The other two coordinated monodentate ligands are one water mol­ecule and two chloride ions with four cobalt(II) complexes in the unit cell. The asymmetric unit of the complex is comprised of half the pyridine ring and water mol­ecule with the CoII atom at the center of the pincer situated about a twofold axis. The Co—N, Co—O, and Co—Cl bond lengths are consistent with single bonds. The cobalt–nitro­gen (triazole) and cobalt–nitro­gen (pyridine) bond lengths are comparable to those previously reported [triazole Co—N = 2.127 (2) and 2.093 (2) Å; pyridine Co—N= 2.187 (3) Å (Fang et al., 2019[Fang, Z.-Y., Zhang, L., Ma, J.-P., Zhao, L., Wang, S.-L., Xie, N.-H., Liu, Y.-Q., Guo, X.-Y. & Qin, J. (2019). Acta Cryst. C75, 1658-1665.])]. The Co—O(water) bond length is comparable to previously reported values [2.09 (3) Å; See et al., 1998[See, R. F., Kruse, R. A. & Strub, W. M. (1998). Inorg. Chem. 37, 5369-5375.]]. The cobalt–chloride bond lengths are longer than previously reported (2.31 Å; Di Vaira & Orioli, 1965[Di Vaira, M. & Orioli, P. L. (1965). Chem. Comm. 590-590.]). The C=S bond length of 1.655 (7) Å is more consistent with a carbon–sulfur double bond (1.61 Å; Trzhtsinskaya & Abramova, 1991[Trzhtsinskaya, B. V. & Abramova, N. D. (1991). J. Sulfur Chem. 10, 389-430.]).

[Figure 3]
Figure 3
A view of the mol­ecular structure of C19H29Cl2CoN7OS2, 8, showing the atom-labeling scheme and displacement ellipsoids drawn at the 30% probability level. The mol­ecule crystallizes in the C2/c space group with a twofold rotation axis perpendicular to a c-glide plane along the center of the pincer ligand through to the metal ion transforming the two asymmetric units into the complete complex and containing four cobalt(II) complexes per unit cell. Atoms with the suffix A are generated by the symmetry operation 1 − x, y, −z + [{1\over 2}].

3. Supra­molecular features

In the crystal, the complex forms a three-centre bifurcated weak hydrogen-bonding inter­action (Table 1[link]) with a chlorine ion, forming one inter­molecular inter­action with the pincer group and a water mol­ecule and a second intra­molecular inter­action with a C—H group within the pincer group. The crystal packing is also highly supported by R22(8)>a>a ring motifs, forming a three-dimensional supra­molecular network structure (Fig. 4[link]). While some stacking of the pyridine rings in the unit cell is observed, there are no relevant ππ inter­actions or classical hydrogen bonds in the crystal packing. The 1H and 13C{1H} NMR spectra of the complex are consistent with a plane of symmetry being present. The electrospray mass spectrum, which was collected in positive ion mode, showed the loss of one water mol­ecule and one chloride ligand from the complex (see Fig. S1 in the supporting information). In the future, we plan to screen this cobalt(II) complex for electrocatalysis reactivity.

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A D—H H⋯A DA D—H⋯A
O1—H1⋯Cl1i 0.84 2.24 3.075 (4) 171
C1—H1A⋯O1ii 0.95 2.69 3.429 (7) 135
C3—H3A⋯Cl1 0.99 2.55 3.360 (8) 138
Symmetry codes: (i) -x+1, -y+1, -z; (ii) -x+1, -y+1, -z+1.
[Figure 4]
Figure 4
A view of the packing and the unit cell along the c axis for the title complex, 8. Dashed lines indicate C22(6)>a<a infinite chains forming along (001) and R22(8)>a>a ring motifs forming a three-dimensional supra­molecular network structure. Stacking of the pyridyl rings face-to-face along the c axis is observed.

4. Database survey

The NNN pincer ligand precursor used in this study is novel. A related NNN pincer ligand, 4, has only been metallated with ZnCl2 to afford a five-coordinate zinc(II) complex (Miecznikowski et al., 2013[Miecznikowski, J. R., Jasinski, J. P., Lynn, M. A., Jain, S., Butrick, E. E., Drozdoski, A. R., Archer, K. A. & Panarra, J. T. (2013). Inorg. Chim. Acta, 394, 310-321.]). To the best of our knowledge (following a search using Sci-Finder Scholar) no other metal complexes that contain this ligand precursor have been reported in the literature.

5. Synthesis and crystallization

The preparation of the title complex, 8, and the corres­ponding ligand precursors 6 and 7 were accomplished according to the scheme below. The precursor for complex 6 has been reported previously (Guino-o et al., 2015[Guino-o, M. A., Folstad, M. J. & Janzen, D. E. (2015). Acta Cryst. E71, 128-132.]).

[Scheme 2]

2,6-Bis[(4-butyl-4H-1,2,4-triazol-1-yl)meth­yl]pyridine diiodide (Miecznikowski et al., 2011[Miecznikowski, J. R., Lo, W., Lynn, M. A., O'Loughlin, B. E., DiMarzio, A. P., Martinez, A. M., Lampe, L., Foley, K. M., Keilich, L. C., Lisi, G. P., Kwiecien, D. J., Pires, C. M., Kelly, W. J., Kloczko, N. F. & Morio, K. N. (2011). Inorg. Chim. Acta, 376, 515-524.]): In a 100 ml round-bottom flask, 3.0501 g (0.0126 mol) of 2,6-bis­[(1H-1,2,4-triazol-1-yl)meth­yl]pyridine was dissolved in 25 ml of 1,4 dioxane. To this solution 13.958 g (0.0759 mol) of iodo­butane were added. This solution was heated at reflux for 18 h. After allowing the solution to cool, the mother liquor was deca­nted off. The precipitate was dissolved in minimal methanol and transferred to a round-bottom flask. The solvent was then removed under reduced pressure. Yield: 3.85 g (0.00748 mol) (59.4% yield).

The product was characterized using 1H and 13C{1H} NMR spectroscopy.

1H NMR (DMSO-d6, 400 Mhz): δ 10.32 (s, 2H, triazole, CH), 9.30 (s, 2H, triazole, CH), 7.97 (m, 1H, pyridine CH), 7.52 (m, (2H, pyridine CH), 5.75 (s, 4H, CH2 linker), 4.32 (m, 4H, n-butyl CH2), 1.85 (m, 4H, n-butyl CH2), 1.32 (m, 4H, n-butyl CH2), 0.92 (m, 6H, n-butyl CH3). 13C {1H} NMR (DMSO-d6, 100 Mhz), δ 152.59 (pyridine C), 144.91 (triazole CH), 143.51 (triazole CH), 138.95 (pyridine CH), 122.85 (pyridine CH), 55.74 (CH2 linker), 47.42 (n-butyl CH2), 30.82 (n-butyl CH2), 18.79 (n-butyl CH2), 13.34 (n-butyl CH3).

2,2′-[Pyridine-2,6-diylbis(methyl­ene)]bis­(4-butyl-1,2,4-triazole-3-thione) (Miecznikowski, 2012[Miecznikowski, J. R., Lo, W., Lynn, M. A., Jain, S., Keilich, L. C., Kloczko, N. F., O'Loughlin, B. E., DiMarzio, A. P., Foley, K. M., Lisi, G. P., Kwiecien, D. J., Butrick, E. E., Powers, E. & Al-Abbasee, R. (2012). Inorg. Chim. Acta, 387, 25-36.]): In a 35 mL microwave reactor vessel, 0.2694 g (5.228 × 10 −4 mol) of 6 were dissolved in 15 mL of MeCN. To this solution, 0.800 g (0.0249 mol) of sulfur and 0.2162 g (0.001564 mol) of potassium carbonate were added. This mixture was heated at 398 K for 6 h in the microwave reactor. After the reaction was complete, the undissolved solids were removed by vacuum filtration and the remaining solvent was removed under reduced pressure. The product was purified by dissolving the product in CH2Cl2 and filtering it through an alumina column to removed undissolved sulfur. Mass product = 0.0934 g (2.24 x 10 −4 mol) (42.8% yield).

The product was characterized using 1H and 13C{1H} NMR spectroscopy. The key feature of the NMR is that one of the acidic protons of the triazole, δ 10.32 in 6 was absent in the product and was presumably replaced with the thione moiety. There was also considerable shifting, to lower ppm values, of the aromatic, methyl­ene and n-butyl CH2 proton resonances in 7 compared to the starting material 6.

1H NMR (DMSO-d6, 400 MHz): δ 8.65 (s, 2H, triazole, CH), 7.75 (m, 1H, pyridine CH), 7.02 (s, 2H, pyridine CH), 5.41 (s, 4H, CH2 linker), 3.98 (m, 4H, n-butyl CH2), 1.72 (m, 4H, n-butyl CH2), 1.29 (m, 4H, n-butyl CH2), 0.92 (m, 6H, n-butyl CH3). 13C {1H} NMR (DMSO-d6, 100 MHz), δ 166.03 (C=S), 155.02 (pyridine C), 141.41 (triazole CH), 137.92 (pyridine CH), 120.23 (pyridine CH), 53.03 (CH2 linker), 45.14 (n-butyl CH2), 29.91 (n-butyl CH2), 19.04 (n-butyl CH2), 13.47 (n-butyl CH3).

Aqua­dichloro-(n3-N,N,N)-[2,6-diylbis(methyl­ene)bis­(4-[N-but­yl]triazol-5-thione-1-yl)]pyridine­cobalt(II) [C19H29Cl2N7OS2Co]: In a 100mL round-bottom flask, 0.0934 g (2.24 × 10−4 mol) of (C19H27N7S2) were combined with 0.076 g (2.2 × 10−4 mol) of cobalt(II)tetra­fluoro­borate [Co(BF4)2·6H2O] and combined with 0.0333 g (4.43 × 10−4 moles) of potassium chloride (KCl) and dissolved in 10 mL of aceto­nitrile. The solution was refluxed for 20 h. The following day, the solution was filtered to remove undissolved material and the solvent was removed under reduced pressure. Yield: 0.162 grams (qu­anti­tative). Purple needle-shaped crystals suitable for X-ray diffraction were grown by a slow vapor diffusion of diethyl ether in to an aceto­nitrile solution containing the cobalt complex.

Analysis calculated for [C19H29Cl2CoN7S2]·H2O: (583.46): C, 39.11; H, 5.36; N, 16.80. Found: C, 39.33; H, 5.07; N, 17.11.

1H NMR (DMSO-d6, 400 MHz) δ 8.61 (s, 2H, triazole, CH), 7.71 (t, 1H, pyridine CH), 6.91 (d, 2H pyridine CH), 5.37 (s, 4H, CH2 linker), 3.95 (m, 4H, n-butyl CH2), 1.70 (m, 4H, n-butyl CH2), 1.26 (m, 4H, n-butyl CH2), 0.88 (t, 6H, n-butyl CH3). 13C {1H} NMR (DMSO-d6, 100 MHz), δ 164.95 (C=S), 153.93 (pyridine C), 140.47 (triazole CH), 136.91 (pyridine CH), 119.19 (pyridine CH), 51.98 (CH2 linker), 44.13 (n-butyl CH2), 28.87 (n-butyl CH2), 18.01 (n-butyl CH2), 12.47 (n-butyl CH3).

The 1H NMR and 13C{1H} spectrum of the complex was acquired in DMSO-d6. The NMR spectrum was consistent with the title complex. There was not considerable shifting of the proton resonances compared to the starting bis-thione precursor. In the 13C{1H} NMR spectrum, the C=S resonance shifted about δ 1 ppm to a lower chemical shift value.

The cyclic voltammograms of 7 and 8 are given in Figs. S1 and S2, respectively, in the supporting information. In both 7 and 8 the supporting electrolyte is 0.2 M tetrabutylammonium tetrafluoroborate. The reference electrode is Ag wire, the working electrode is glassy carbon and the counter electrode is a platinum wire. The scan rate is 100 mV s-1.

Electronic absorption spectrum of 8 in aceto­nitrile (1.89 mM) (see Fig. S4 in the supporting information): UV–Visible data: λ (nm), ( (M−1cm−1) (1.89 mM in MeCN) 234.00 (2480); 244.00 (2480); 368.00 (158); 574.00 nm (sh) (386); 589.00 (428); 682.00 (648).

6. Refinement

Crystal data, data collection and structure refinement details are summarized in Table 2[link]. H atoms were positioned geometrically (O—H = 0.84, C—H = 0.95–0.99 Å) and refined as riding with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(O, C-meth­yl).

Table 2
Experimental details

Crystal data
Chemical formula [CoCl2(C19H27N7S2)(H2O)]
Mr 565.44
Crystal system, space group Monoclinic, C2/c
Temperature (K) 173
a, b, c (Å) 26.3412 (8), 11.4270 (3), 8.6226 (3)
β (°) 90.465 (3)
V3) 2595.31 (13)
Z 4
Radiation type Cu Kα
μ (mm−1) 8.80
Crystal size (mm) 0.32 × 0.24 × 0.1
 
Data collection
Diffractometer Rigaku Oxford Diffraction Gemini Eos
Absorption correction Multi-scan (CrysAlis PRO; Rigaku OD, 2015[Rigaku OD (2015). CrysAlis PRO. Rigaku Americas, The Woodlands, Texas, USA.])
Tmin, Tmax 0.050, 1.000
No. of measured, independent and observed [I > 2σ(I)] reflections 7187, 2483, 1935
Rint 0.077
(sin θ/λ)max−1) 0.614
 
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.082, 0.235, 1.07
No. of reflections 2483
No. of parameters 149
H-atom treatment H-atom parameters constrained
Δρmax, Δρmin (e Å−3) 1.40, −0.65
Computer programs: CrysAlis PRO (Rigaku OD, 2015[Rigaku OD (2015). CrysAlis PRO. Rigaku Americas, The Woodlands, Texas, USA.]), SHELXT (Sheldrick, 2015b[Sheldrick, G. M. (2015b). Acta Cryst. C71, 3-8.]), SHELXL (Sheldrick, 2015a[Sheldrick, G. M. (2015a). Acta Cryst. A71, 3-8.]) and OLEX2 (Dolomanov et al., 2009[Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339-341.][Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339-341.]).

Supporting information


Computing details top

Data collection: CrysAlis PRO (Rigaku OD, 2015); cell refinement: CrysAlis PRO (Rigaku OD, 2015); data reduction: CrysAlis PRO (Rigaku OD, 2015); program(s) used to solve structure: ShelXT (Sheldrick, 2015b); program(s) used to refine structure: SHELXL (Sheldrick, 2015a); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).

Aquadichlorido{1,1'-[(pyridine-2,6-diyl-κN)bis(methylene)]bis(4-butyl-4,5-dihydro-1H-1,2,4-triazole-5-thione-κN2)}cobalt(II) top
Crystal data top
[CoCl2(C19H27N7S2)(H2O)]F(000) = 1172
Mr = 565.44Dx = 1.447 Mg m3
Monoclinic, C2/cCu Kα radiation, λ = 1.54184 Å
a = 26.3412 (8) ÅCell parameters from 3680 reflections
b = 11.4270 (3) Åθ = 5.1–71.4°
c = 8.6226 (3) ŵ = 8.80 mm1
β = 90.465 (3)°T = 173 K
V = 2595.31 (13) Å3Plate, violet
Z = 40.32 × 0.24 × 0.1 mm
Data collection top
Rigaku Oxford Diffraction Gemini Eos
diffractometer
1935 reflections with I > 2σ(I)
Detector resolution: 16.0416 pixels mm-1Rint = 0.077
ω scansθmax = 71.3°, θmin = 3.4°
Absorption correction: multi-scan
(CrysAlisPro; Rigaku OD, 2015)
h = 3132
Tmin = 0.050, Tmax = 1.000k = 1413
7187 measured reflectionsl = 105
2483 independent reflections
Refinement top
Refinement on F2Hydrogen site location: mixed
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.082 w = 1/[σ2(Fo2) + (0.0964P)2 + 26.3272P]
where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.235(Δ/σ)max < 0.001
S = 1.07Δρmax = 1.40 e Å3
2483 reflectionsΔρmin = 0.65 e Å3
149 parametersExtinction correction: SHELXL2018/1 (Sheldrick 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.0012 (2)
Primary atom site location: dual
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Co10.5000000.67881 (12)0.2500000.0337 (5)
Cl10.54526 (6)0.66425 (15)0.00348 (19)0.0453 (5)
S10.67541 (8)0.8989 (2)0.5267 (3)0.0709 (7)
O10.5000000.4946 (6)0.2500000.0528 (18)
H10.4905700.4531560.1746400.079*
N10.5694 (2)0.6878 (5)0.3822 (6)0.0404 (13)
N20.5993 (2)0.7856 (5)0.3730 (7)0.0400 (13)
N30.6244 (2)0.6944 (6)0.5757 (7)0.0439 (14)
N40.5000000.8712 (7)0.2500000.0396 (17)
C10.5856 (3)0.6350 (7)0.5066 (8)0.0451 (16)
H1A0.5719810.5636860.5446920.054*
C20.6333 (3)0.7948 (7)0.4898 (9)0.0472 (17)
C30.5931 (3)0.8675 (6)0.2452 (9)0.0454 (16)
H3A0.5948250.8241190.1459750.054*
H3B0.6215430.9242660.2474390.054*
C40.5441 (3)0.9327 (6)0.2516 (8)0.0456 (16)
C50.5448 (4)1.0553 (7)0.2553 (11)0.065 (2)
H50.5761851.0961910.2615140.078*
C60.5000001.1154 (10)0.2500000.076 (4)
H60.5000001.1985360.2500020.092*
C70.6532 (3)0.6589 (9)0.7150 (10)0.065 (2)
H7A0.6294780.6217980.7886440.078*
H7B0.6669740.7300850.7654500.078*
C80.6957 (4)0.5769 (11)0.6865 (13)0.083 (3)
H8A0.7176870.5734440.7801110.100*
H8B0.7164440.6069520.5998970.100*
C90.6777 (5)0.4566 (15)0.6479 (17)0.116 (5)
H9A0.6612820.4594380.5443110.139*
H9B0.6511490.4351400.7234080.139*
C100.7162 (6)0.3608 (15)0.6464 (19)0.125 (5)
H10A0.7434340.3810830.5744310.188*
H10B0.7000150.2877690.6128670.188*
H10C0.7304460.3507240.7508960.188*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Co10.0320 (7)0.0305 (8)0.0387 (8)0.0000.0011 (6)0.000
Cl10.0447 (9)0.0495 (10)0.0417 (9)0.0014 (7)0.0047 (7)0.0035 (7)
S10.0442 (10)0.0749 (15)0.0934 (17)0.0210 (10)0.0088 (10)0.0141 (12)
O10.079 (5)0.038 (4)0.041 (4)0.0000.007 (3)0.000
N10.035 (3)0.041 (3)0.045 (3)0.008 (2)0.003 (2)0.005 (2)
N20.032 (3)0.037 (3)0.052 (3)0.013 (2)0.002 (2)0.004 (2)
N30.028 (3)0.058 (4)0.046 (3)0.002 (2)0.001 (2)0.001 (3)
N40.041 (4)0.037 (4)0.041 (4)0.0000.001 (3)0.000
C10.037 (3)0.047 (4)0.052 (4)0.000 (3)0.009 (3)0.010 (3)
C20.031 (3)0.053 (4)0.058 (4)0.002 (3)0.003 (3)0.002 (3)
C30.041 (4)0.043 (4)0.052 (4)0.010 (3)0.005 (3)0.008 (3)
C40.052 (4)0.040 (4)0.045 (4)0.003 (3)0.002 (3)0.001 (3)
C50.072 (5)0.038 (4)0.086 (6)0.008 (4)0.014 (5)0.006 (4)
C60.080 (9)0.030 (6)0.119 (12)0.0000.035 (8)0.000
C70.043 (4)0.096 (7)0.055 (5)0.001 (4)0.004 (4)0.006 (5)
C80.057 (5)0.117 (10)0.075 (6)0.012 (6)0.011 (5)0.012 (6)
C90.089 (8)0.154 (14)0.104 (10)0.022 (9)0.028 (7)0.035 (9)
C100.106 (10)0.141 (13)0.129 (12)0.026 (10)0.028 (9)0.008 (10)
Geometric parameters (Å, º) top
Co1—Cl12.4512 (16)C3—H3A0.9900
Co1—Cl1i2.4512 (16)C3—H3B0.9900
Co1—O12.104 (7)C3—C41.493 (10)
Co1—N12.149 (6)C4—C51.401 (11)
Co1—N1i2.148 (6)C5—H50.9500
Co1—N42.198 (8)C5—C61.367 (11)
S1—C21.655 (7)C6—H60.9500
O1—H10.8403C7—H7A0.9900
O1—H1i0.8403C7—H7B0.9900
N1—N21.370 (7)C7—C81.482 (14)
N1—C11.300 (9)C8—H8A0.9900
N2—C21.346 (9)C8—H8B0.9900
N2—C31.454 (9)C8—C91.491 (18)
N3—C11.360 (9)C9—H9A0.9900
N3—C21.387 (10)C9—H9B0.9900
N3—C71.472 (10)C9—C101.493 (19)
N4—C4i1.357 (8)C10—H10A0.9800
N4—C41.357 (8)C10—H10B0.9800
C1—H1A0.9500C10—H10C0.9800
Cl1i—Co1—Cl1172.22 (10)N2—C3—C4112.6 (6)
O1—Co1—Cl1i86.11 (5)H3A—C3—H3B107.8
O1—Co1—Cl186.11 (5)C4—C3—H3A109.1
O1—Co1—N1i92.74 (16)C4—C3—H3B109.1
O1—Co1—N192.74 (16)N4—C4—C3118.8 (6)
O1—Co1—N4180.0N4—C4—C5122.0 (8)
N1i—Co1—Cl1i92.61 (15)C5—C4—C3119.2 (7)
N1—Co1—Cl192.61 (15)C4—C5—H5120.3
N1—Co1—Cl1i87.76 (15)C6—C5—C4119.3 (9)
N1i—Co1—Cl187.76 (15)C6—C5—H5120.3
N1i—Co1—N1174.5 (3)C5—C6—C5i119.7 (11)
N1i—Co1—N487.26 (16)C5—C6—H6120.2
N1—Co1—N487.26 (16)C5i—C6—H6120.2
N4—Co1—Cl193.89 (5)N3—C7—H7A108.5
N4—Co1—Cl1i93.89 (5)N3—C7—H7B108.5
Co1—O1—H1124.3N3—C7—C8115.1 (8)
Co1—O1—H1i124.346 (2)H7A—C7—H7B107.5
H1—O1—H1i111.3C8—C7—H7A108.5
N2—N1—Co1119.7 (4)C8—C7—H7B108.5
C1—N1—Co1133.5 (5)C7—C8—H8A109.1
C1—N1—N2103.9 (6)C7—C8—H8B109.1
N1—N2—C3120.5 (5)C7—C8—C9112.3 (9)
C2—N2—N1113.6 (6)H8A—C8—H8B107.9
C2—N2—C3125.9 (6)C9—C8—H8A109.1
C1—N3—C2108.0 (6)C9—C8—H8B109.1
C1—N3—C7126.9 (7)C8—C9—H9A107.9
C2—N3—C7125.1 (6)C8—C9—H9B107.9
C4i—N4—Co1121.2 (4)C8—C9—C10117.6 (11)
C4—N4—Co1121.2 (4)H9A—C9—H9B107.2
C4i—N4—C4117.6 (8)C10—C9—H9A107.9
N1—C1—N3111.8 (6)C10—C9—H9B107.9
N1—C1—H1A124.1C9—C10—H10A109.5
N3—C1—H1A124.1C9—C10—H10B109.5
N2—C2—S1129.8 (6)C9—C10—H10C109.5
N2—C2—N3102.7 (6)H10A—C10—H10B109.5
N3—C2—S1127.5 (6)H10A—C10—H10C109.5
N2—C3—H3A109.1H10B—C10—H10C109.5
N2—C3—H3B109.1
Co1—N1—N2—C2162.7 (5)C1—N3—C2—N21.2 (8)
Co1—N1—N2—C317.8 (8)C1—N3—C7—C883.9 (10)
Co1—N1—C1—N3160.2 (5)C2—N2—C3—C4111.9 (8)
Co1—N4—C4—C33.1 (7)C2—N3—C1—N11.0 (8)
Co1—N4—C4—C5178.5 (6)C2—N3—C7—C894.5 (11)
N1—N2—C2—S1178.3 (6)C3—N2—C2—S12.3 (11)
N1—N2—C2—N31.1 (8)C3—N2—C2—N3178.4 (6)
N1—N2—C3—C468.7 (8)C3—C4—C5—C6175.3 (6)
N2—N1—C1—N30.3 (8)C4i—N4—C4—C3176.9 (7)
N2—C3—C4—N458.7 (8)C4i—N4—C4—C51.5 (6)
N2—C3—C4—C5122.8 (8)C4—C5—C6—C5i1.5 (6)
N3—C7—C8—C972.6 (12)C7—N3—C1—N1177.6 (7)
N4—C4—C5—C63.1 (12)C7—N3—C2—S13.1 (11)
C1—N1—N2—C20.5 (8)C7—N3—C2—N2177.5 (7)
C1—N1—N2—C3179.0 (6)C7—C8—C9—C10168.6 (12)
C1—N3—C2—S1178.2 (6)
Symmetry code: (i) x+1, y, z+1/2.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1—H1···Cl1ii0.842.243.075 (4)171
C1—H1A···O1iii0.952.693.429 (7)135
C3—H3A···Cl10.992.553.360 (8)138
Symmetry codes: (ii) x+1, y+1, z; (iii) x+1, y+1, z+1.
 

Acknowledgements

JRM is grateful for all of the financial support he received for this project: the Connecticut NASA Space Grant Alliance (award No. P-1168), the National Science Foundation–Major Research Instrumentation Program (grant No. CHE-1827854) for funds to acquire a 400 MHz NMR spectrometer. JRM acknowledges support from The Science Institute of the College of Arts and Sciences at Fairfield University for this work. JRM thanks Terence Wu (Yale University) for assistance in acquiring electrospray mass spectra. JP expresses thanks to the National Science Foundation–Major Research Instrumentation Program (grant No. CHE-1039027) for funds to purchase an X-ray diffractometer. ANS and NRB acknowledge financial support from the Klimas Fund to support their summer research at Fairfield University. SCB acknowledges financial support from the Department of Chemistry and Biochemistry Kuck Fund to support her summer laboratory research.

Funding information

Funding for this research was provided by: National Science Foundation (award No. CHE-1827854 to John R. Miecznikowski; award No. CHE-1039027 to Jerry P. Jasinski); Connecticut Space Grant College Consortium (award No. P-1168 to John R. Miecznikowski); Fairfield University Science Institute of the College of Arts and Sciences (award to John R. Miecznikowski); Fairfield University Kuck Fund (award to Sheila C. Bonitatibus); Fairfield Univesity Klimas Fund (award to Allison N. Smolinsky, Natalia R. Bertolotti).

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