Buy article online - an online subscription or single-article purchase is required to access this article.
The title compound, C
34H
38N
4, possesses
Ci symmetry. The supramolecular structure is achieved by intramolecular C—H
N and weak intermolecular C—H
π interactions.
Supporting information
CCDC reference: 282515
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.002 Å
- R factor = 0.048
- wR factor = 0.140
- Data-to-parameter ratio = 18.5
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.96
PLAT199_ALERT_1_C Check the Reported _cell_measurement_temperature 293 K
PLAT230_ALERT_2_C Hirshfeld Test Diff for N2 - C3 .. 6.64 su
PLAT480_ALERT_4_C Long H...A H-Bond Reported H8 .. CG1 .. 3.07 Ang.
PLAT480_ALERT_4_C Long H...A H-Bond Reported H15 .. CG2 .. 3.10 Ang.
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
5 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
1 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
2 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: COLLECT (Nonius, 2000); cell refinement: SCALEPACK (Otwinowski & Minor, 1997); data reduction: SCALEPACK and DENZO (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick 1997); program(s) used to refine structure: SHELXL97 (Sheldrick 1997); molecular graphics: DIAMOND (Brandenburg, 1999); software used to prepare material for publication: WinGX (Farrugia, 1999).
1,1',3,3'-Tetrabenzyl-2,2'-biimidazolidine
top
Crystal data top
C34H38N4 | F(000) = 540 |
Mr = 502.68 | Dx = 1.157 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 600 reflections |
a = 5.8384 (1) Å | θ = 20–25° |
b = 9.6253 (2) Å | µ = 0.07 mm−1 |
c = 25.7216 (4) Å | T = 293 K |
β = 93.421 (1)° | Block, colorless |
V = 1442.88 (4) Å3 | 0.15 × 0.1 × 0.09 mm |
Z = 2 | |
Data collection top
Nonius KappaCCD diffractometer | 2262 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.017 |
Graphite monochromator | θmax = 27.5°, θmin = 4.2° |
Detector resolution: 9 pixels mm-1 | h = −7→7 |
φ and ω scans | k = −12→8 |
4969 measured reflections | l = −33→33 |
3185 independent reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.048 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.140 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0668P)2 + 0.1647P] where P = (Fo2 + 2Fc2)/3 |
3185 reflections | (Δ/σ)max = 0.001 |
172 parameters | Δρmax = 0.14 e Å−3 |
0 restraints | Δρmin = −0.13 e Å−3 |
Special details top
Experimental. Background measurement: Moving crystal and moving counter at the beginning and
end of scan, each for 25% of total scan area. Crystal mounted on a glass
fiber. |
Geometry. Bond distances, angles etc. have been calculated using the rounded
fractional coordinates. All e.s.d.'s are estimated from the variances of the
(full) variance-covariance matrix. The cell e.s.d.'s are taken into account in
the estimation of distances, angles and torsion angles |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N1 | 1.04063 (19) | 0.40326 (11) | 0.06374 (4) | 0.0564 (4) | |
N2 | 0.88401 (19) | 0.32282 (10) | −0.01848 (4) | 0.0560 (4) | |
C1 | 1.0966 (3) | 0.25582 (15) | 0.05534 (5) | 0.0726 (6) | |
C2 | 0.9154 (3) | 0.20451 (15) | 0.01646 (6) | 0.0749 (6) | |
C3 | 0.9255 (2) | 0.44887 (13) | 0.01398 (5) | 0.0544 (4) | |
C4 | 0.6618 (2) | 0.32237 (15) | −0.04776 (6) | 0.0662 (5) | |
C5 | 0.6365 (2) | 0.20049 (14) | −0.08443 (5) | 0.0602 (5) | |
C6 | 0.4453 (3) | 0.11588 (18) | −0.08482 (6) | 0.0763 (6) | |
C7 | 0.4219 (3) | 0.0047 (2) | −0.11832 (6) | 0.0833 (6) | |
C8 | 0.5887 (3) | −0.02533 (16) | −0.15198 (6) | 0.0729 (5) | |
C9 | 0.7787 (3) | 0.05820 (16) | −0.15233 (6) | 0.0742 (5) | |
C10 | 0.8016 (3) | 0.17010 (16) | −0.11901 (7) | 0.0721 (6) | |
C11 | 0.8997 (3) | 0.42454 (17) | 0.10822 (5) | 0.0665 (5) | |
C12 | 1.0251 (3) | 0.38645 (15) | 0.15938 (5) | 0.0630 (5) | |
C13 | 0.9354 (3) | 0.29056 (19) | 0.19243 (6) | 0.0805 (6) | |
C14 | 1.0523 (4) | 0.2546 (2) | 0.23927 (6) | 0.0961 (8) | |
C15 | 1.2567 (4) | 0.3158 (2) | 0.25372 (7) | 0.0941 (8) | |
C16 | 1.3470 (3) | 0.4111 (2) | 0.22160 (7) | 0.0909 (7) | |
C17 | 1.2336 (3) | 0.44596 (19) | 0.17477 (6) | 0.0787 (6) | |
H1A | 1.24763 | 0.24666 | 0.04191 | 0.0871* | |
H1B | 1.09343 | 0.20399 | 0.08763 | 0.0871* | |
H2A | 0.77479 | 0.18235 | 0.03296 | 0.0898* | |
H2B | 0.96681 | 0.12316 | −0.00181 | 0.0898* | |
H3A | 0.77860 | 0.49270 | 0.02062 | 0.0653* | |
H4A | 0.54068 | 0.31920 | −0.02357 | 0.0794* | |
H4B | 0.64474 | 0.40789 | −0.06756 | 0.0794* | |
H6 | 0.33093 | 0.13429 | −0.06212 | 0.0915* | |
H7 | 0.29150 | −0.05069 | −0.11817 | 0.1000* | |
H8 | 0.57313 | −0.10134 | −0.17423 | 0.0874* | |
H9 | 0.89248 | 0.03932 | −0.17513 | 0.0890* | |
H10 | 0.93085 | 0.22632 | −0.11982 | 0.0865* | |
H11A | 0.85367 | 0.52127 | 0.10934 | 0.0798* | |
H11B | 0.76183 | 0.36862 | 0.10358 | 0.0798* | |
H13 | 0.79470 | 0.24927 | 0.18330 | 0.0966* | |
H14 | 0.99062 | 0.18853 | 0.26079 | 0.1153* | |
H15 | 1.33380 | 0.29273 | 0.28521 | 0.1128* | |
H16 | 1.48642 | 0.45318 | 0.23131 | 0.1091* | |
H17 | 1.29869 | 0.51063 | 0.15320 | 0.0945* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.0627 (7) | 0.0519 (6) | 0.0551 (6) | 0.0071 (5) | 0.0086 (5) | 0.0047 (5) |
N2 | 0.0633 (7) | 0.0433 (6) | 0.0614 (6) | 0.0053 (5) | 0.0033 (5) | 0.0016 (4) |
C1 | 0.0992 (12) | 0.0601 (9) | 0.0592 (8) | 0.0264 (8) | 0.0110 (8) | 0.0089 (7) |
C2 | 0.1163 (13) | 0.0462 (8) | 0.0625 (8) | 0.0101 (8) | 0.0080 (8) | 0.0036 (6) |
C3 | 0.0552 (7) | 0.0480 (7) | 0.0607 (7) | 0.0096 (5) | 0.0097 (5) | 0.0031 (5) |
C4 | 0.0560 (8) | 0.0567 (8) | 0.0860 (10) | 0.0010 (6) | 0.0052 (7) | −0.0006 (7) |
C5 | 0.0584 (8) | 0.0538 (8) | 0.0678 (8) | −0.0040 (6) | −0.0007 (6) | 0.0066 (6) |
C6 | 0.0707 (9) | 0.0895 (11) | 0.0692 (9) | −0.0246 (8) | 0.0084 (7) | −0.0021 (8) |
C7 | 0.0856 (12) | 0.0915 (12) | 0.0722 (9) | −0.0380 (9) | −0.0012 (8) | −0.0010 (9) |
C8 | 0.0903 (11) | 0.0638 (9) | 0.0625 (8) | −0.0098 (8) | −0.0119 (8) | 0.0036 (7) |
C9 | 0.0763 (10) | 0.0680 (9) | 0.0789 (9) | 0.0006 (8) | 0.0101 (8) | −0.0020 (8) |
C10 | 0.0632 (9) | 0.0599 (9) | 0.0941 (11) | −0.0099 (7) | 0.0125 (8) | −0.0017 (7) |
C11 | 0.0654 (9) | 0.0734 (9) | 0.0614 (8) | 0.0049 (7) | 0.0098 (7) | −0.0069 (7) |
C12 | 0.0700 (9) | 0.0656 (8) | 0.0541 (7) | 0.0003 (7) | 0.0102 (6) | −0.0130 (6) |
C13 | 0.0947 (12) | 0.0903 (11) | 0.0577 (8) | −0.0233 (9) | 0.0140 (8) | −0.0130 (8) |
C14 | 0.1421 (18) | 0.0925 (13) | 0.0549 (9) | −0.0161 (12) | 0.0165 (10) | −0.0016 (9) |
C15 | 0.1221 (16) | 0.1011 (14) | 0.0574 (9) | 0.0053 (12) | −0.0078 (9) | −0.0134 (9) |
C16 | 0.0903 (12) | 0.1072 (14) | 0.0737 (10) | −0.0071 (10) | −0.0080 (9) | −0.0189 (10) |
C17 | 0.0827 (11) | 0.0830 (11) | 0.0704 (9) | −0.0127 (9) | 0.0040 (8) | −0.0059 (8) |
Geometric parameters (Å, º) top
N1—C1 | 1.4751 (18) | C16—C17 | 1.381 (2) |
N1—C3 | 1.4765 (16) | C1—H1A | 0.9700 |
N1—C11 | 1.4630 (18) | C1—H1B | 0.9700 |
N2—C2 | 1.4555 (18) | C2—H2A | 0.9701 |
N2—C3 | 1.4845 (16) | C2—H2B | 0.9700 |
N2—C4 | 1.4607 (17) | C3—H3A | 0.9799 |
C1—C2 | 1.496 (2) | C4—H4A | 0.9699 |
C3—C3i | 1.5223 (17) | C4—H4B | 0.9700 |
C4—C5 | 1.507 (2) | C6—H6 | 0.9299 |
C5—C6 | 1.381 (2) | C7—H7 | 0.9296 |
C5—C10 | 1.381 (2) | C8—H8 | 0.9300 |
C6—C7 | 1.376 (2) | C9—H9 | 0.9299 |
C7—C8 | 1.372 (2) | C10—H10 | 0.9298 |
C8—C9 | 1.370 (2) | C11—H11A | 0.9700 |
C9—C10 | 1.378 (2) | C11—H11B | 0.9698 |
C11—C12 | 1.512 (2) | C13—H13 | 0.9300 |
C12—C13 | 1.379 (2) | C14—H14 | 0.9297 |
C12—C17 | 1.382 (2) | C15—H15 | 0.9298 |
C13—C14 | 1.392 (2) | C16—H16 | 0.9299 |
C14—C15 | 1.362 (3) | C17—H17 | 0.9300 |
C15—C16 | 1.362 (3) | | |
| | | |
N1···N2i | 2.9260 (14) | H2B···H2Biii | 2.4033 |
N1···C4i | 3.2011 (17) | H3A···H4A | 2.4129 |
N2···N1i | 2.9260 (14) | H3A···H4B | 2.4920 |
N1···H17 | 2.8669 | H3A···H11A | 2.3143 |
N1···H4Bi | 2.5820 | H3A···H11B | 2.4524 |
N2···H10 | 2.7959 | H4A···H1Avi | 2.5682 |
C2···C10 | 3.524 (2) | H4A···H2A | 2.3410 |
C4···N1i | 3.2011 (17) | H4A···H3A | 2.4129 |
C10···C2 | 3.524 (2) | H4A···H6 | 2.3464 |
C2···H11B | 2.9258 | H4B···H3A | 2.4920 |
C5···H2A | 3.0836 | H4B···N1i | 2.5820 |
C5···H2B | 2.8810 | H4B···H17i | 2.3798 |
C8···H15ii | 3.0904 | H6···H4A | 2.3464 |
C8···H1Biii | 2.9622 | H7···H2Av | 2.5808 |
C9···H1Biii | 3.0899 | H7···H13v | 2.5715 |
C11···H2A | 3.0895 | H8···H13v | 2.5756 |
C12···H1B | 2.5956 | H10···N2 | 2.7959 |
C13···H1B | 3.0181 | H11A···H3A | 2.3143 |
H1A···H4Aiv | 2.5682 | H11B···C2 | 2.9258 |
H1B···C12 | 2.5956 | H11B···H1B | 2.5539 |
H1B···C13 | 3.0181 | H11B···H2A | 2.5566 |
H1B···H11B | 2.5539 | H11B···H3A | 2.4524 |
H1B···C8iii | 2.9622 | H11B···H13 | 2.3482 |
H1B···C9iii | 3.0899 | H13···H11B | 2.3482 |
H2A···C5 | 3.0836 | H13···H7v | 2.5715 |
H2A···C11 | 3.0895 | H13···H8v | 2.5756 |
H2A···H4A | 2.3410 | H15···C8vii | 3.0904 |
H2A···H11B | 2.5566 | H17···N1 | 2.8669 |
H2A···H7v | 2.5808 | H17···H4Bi | 2.3798 |
H2B···C5 | 2.8810 | | |
| | | |
C1—N1—C3 | 104.62 (10) | C1—C2—H2A | 111.31 |
C1—N1—C11 | 112.90 (11) | C1—C2—H2B | 111.32 |
C3—N1—C11 | 112.84 (11) | H2A—C2—H2B | 109.20 |
C2—N2—C3 | 106.37 (10) | N1—C3—H3A | 109.56 |
C2—N2—C4 | 113.03 (11) | N2—C3—H3A | 109.56 |
C3—N2—C4 | 113.73 (10) | C3i—C3—H3A | 109.56 |
N1—C1—C2 | 105.16 (12) | N2—C4—H4A | 109.18 |
N2—C2—C1 | 102.27 (11) | N2—C4—H4B | 109.17 |
N1—C3—N2 | 107.16 (10) | C5—C4—H4A | 109.21 |
N1—C3—C3i | 111.00 (10) | C5—C4—H4B | 109.20 |
N2—C3—C3i | 109.96 (10) | H4A—C4—H4B | 107.91 |
N2—C4—C5 | 112.08 (10) | C5—C6—H6 | 119.56 |
C4—C5—C6 | 120.83 (12) | C7—C6—H6 | 119.56 |
C4—C5—C10 | 121.45 (12) | C6—C7—H7 | 119.62 |
C6—C5—C10 | 117.72 (13) | C8—C7—H7 | 119.61 |
C5—C6—C7 | 120.88 (15) | C7—C8—H8 | 120.47 |
C6—C7—C8 | 120.76 (16) | C9—C8—H8 | 120.46 |
C7—C8—C9 | 119.07 (15) | C8—C9—H9 | 119.90 |
C8—C9—C10 | 120.20 (16) | C10—C9—H9 | 119.90 |
C5—C10—C9 | 121.36 (15) | C5—C10—H10 | 119.32 |
N1—C11—C12 | 112.39 (13) | C9—C10—H10 | 119.32 |
C11—C12—C13 | 121.11 (15) | N1—C11—H11A | 109.11 |
C11—C12—C17 | 121.42 (14) | N1—C11—H11B | 109.12 |
C13—C12—C17 | 117.47 (14) | C12—C11—H11A | 109.11 |
C12—C13—C14 | 121.01 (17) | C12—C11—H11B | 109.13 |
C13—C14—C15 | 120.31 (17) | H11A—C11—H11B | 107.88 |
C14—C15—C16 | 119.36 (17) | C12—C13—H13 | 119.51 |
C15—C16—C17 | 120.67 (17) | C14—C13—H13 | 119.49 |
C12—C17—C16 | 121.17 (16) | C13—C14—H14 | 119.86 |
N1—C1—H1A | 110.71 | C15—C14—H14 | 119.83 |
N1—C1—H1B | 110.71 | C14—C15—H15 | 120.33 |
C2—C1—H1A | 110.71 | C16—C15—H15 | 120.31 |
C2—C1—H1B | 110.72 | C15—C16—H16 | 119.66 |
H1A—C1—H1B | 108.81 | C17—C16—H16 | 119.66 |
N2—C2—H2A | 111.31 | C12—C17—H17 | 119.40 |
N2—C2—H2B | 111.32 | C16—C17—H17 | 119.43 |
| | | |
C3—N1—C1—C2 | −29.26 (14) | N2—C4—C5—C6 | 129.43 (14) |
C11—N1—C1—C2 | 93.80 (13) | N2—C4—C5—C10 | −51.15 (18) |
C1—N1—C3—N2 | 9.03 (13) | C4—C5—C6—C7 | 179.92 (15) |
C11—N1—C3—N2 | −114.08 (12) | C6—C5—C10—C9 | −0.9 (2) |
C1—N1—C3—C3i | −111.06 (12) | C10—C5—C6—C7 | 0.5 (2) |
C11—N1—C3—C3i | 125.84 (12) | C4—C5—C10—C9 | 179.67 (14) |
C3—N1—C11—C12 | −176.18 (11) | C5—C6—C7—C8 | 0.4 (3) |
C1—N1—C11—C12 | 65.45 (16) | C6—C7—C8—C9 | −0.8 (3) |
C4—N2—C2—C1 | −157.97 (12) | C7—C8—C9—C10 | 0.4 (2) |
C3—N2—C2—C1 | −32.47 (14) | C8—C9—C10—C5 | 0.4 (2) |
C4—N2—C3—N1 | 140.17 (10) | N1—C11—C12—C13 | −124.08 (16) |
C2—N2—C4—C5 | −64.61 (15) | N1—C11—C12—C17 | 55.81 (19) |
C2—N2—C3—N1 | 15.09 (13) | C17—C12—C13—C14 | −0.6 (3) |
C2—N2—C3—C3i | 135.84 (11) | C11—C12—C13—C14 | 179.34 (16) |
C4—N2—C3—C3i | −99.09 (12) | C11—C12—C17—C16 | 179.80 (16) |
C3—N2—C4—C5 | 173.95 (10) | C13—C12—C17—C16 | −0.3 (3) |
N1—C1—C2—N2 | 38.44 (14) | C12—C13—C14—C15 | 1.2 (3) |
N2—C3—C3i—N1i | 61.59 (13) | C13—C14—C15—C16 | −0.9 (3) |
N2—C3—C3i—N2i | −179.98 (13) | C14—C15—C16—C17 | 0.0 (3) |
N1—C3—C3i—N2i | −61.59 (13) | C15—C16—C17—C12 | 0.6 (3) |
N1—C3—C3i—N1i | 179.98 (12) | | |
Symmetry codes: (i) −x+2, −y+1, −z; (ii) x−1, −y+1/2, z−1/2; (iii) −x+2, −y, −z; (iv) x+1, y, z; (v) −x+1, −y, −z; (vi) x−1, y, z; (vii) x+1, −y+1/2, z+1/2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4B···N1i | 0.97 | 2.58 | 3.2011 (17) | 122 |
C8—H8···Cg1iii | 0.93 | 3.07 | 3.8140 (18) | 139 |
C15—H15···Cg2vii | 0.93 | 3.10 | 3.894 (2) | 144 |
Symmetry codes: (i) −x+2, −y+1, −z; (iii) −x+2, −y, −z; (vii) x+1, −y+1/2, z+1/2. |
Subscribe to Acta Crystallographica Section E: Crystallographic Communications
The full text of this article is available to subscribers to the journal.
If you have already registered and are using a computer listed in your registration details, please email
support@iucr.org for assistance.