Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S160053680703365X/is2190sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S160053680703365X/is2190Isup2.hkl |
CCDC reference: 657747
Key indicators
- Single-crystal X-ray study
- T = 299 K
- Mean (C-C) = 0.004 Å
- R factor = 0.054
- wR factor = 0.153
- Data-to-parameter ratio = 15.3
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 2.72 Ratio PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C4 PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.07
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 3 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 3 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
Many derivatives of pyrimidinone have been prepared and their biological and pharmaceutical activities have been studied by Modica et al. (2004) and Panico et al. (2001). For related literature, see: Cremer & Pople (1975); Ding et al. (2004); Xu et al. (2005); Zheng et al. (2006).
To a solution of ethyl 2-(phenyliminomethyleneamino)-5,6-dihydro-4H- cyclopenta[b]thiophene-2-carboxylate (3 mmol) in anhydrous dichloromethane (15 ml) was added pyrrolidine (3 mmol). After stirring the reaction mixture for 2 h, the solvent was removed and anhydrous ethanol (10 ml) with several drops of EtONa in EtOH was added. The mixture was stirred for 4 h at room temperature. The solution was concentrated under reduced pressure and the residue was recrystallized from ethanol to give the title compound in a yield of 86%. Single crystals suitable for X-ray diffraction were obtained by recrystallization from a mixed solvent of ethanol and dichloromethane (1:1 v/v) at room temperature.
All H-atoms were positioned geometrically (C—H = 0.93 or 0.97 Å) and refined as riding, with Uiso(H) = 1.2Ueq(C).
Derivatives of pyrimidinone are attracting increasing attention in the synthetic chemistry community because of the important role played by such systems in many natural products, also in antibiotics and drugs (Modica et al., 2004; Panico et al., 2001; Ding et al., 2004). Recently, we have been interested in the synthesis of new thieno[3,2-d]pyrimidone derivatives. Some related X-ray crystal structure reports for pyrimidinone derivatives have been published (Zheng et al., 2006; Xu et al., 2005). Here, the structure of the title compound, which may be used as a new precursor for obtaining bioactive molecules, is reported (Fig. 1). In the molecule, the bond lengths and angles are unexceptional. The fused ring of the thieno[3,2-d]pyrimidone system is essentially planar, making a dihedral angle of 68.64 (9)° with the pnenyl C14—C19 ring. C1—C5 and C10/C11/C12/C13/N3 rings have a total puckering amplitude of 0.118 (4) and 0.418 (3) Å, respectively (Cremer & Pople, 1975) and a distorted half-chair form [φ = 80.0 (2) and 93.2 (3)°]. The crystal packing is mainly stabilized by C—H···O and C—H···π interactions (Table 1 and Fig. 2). There are no π-π interactions.
Many derivatives of pyrimidinone have been prepared and their biological and pharmaceutical activities have been studied by Modica et al. (2004) and Panico et al. (2001). For related literature, see: Cremer & Pople (1975); Ding et al. (2004); Xu et al. (2005); Zheng et al. (2006).
Data collection: SMART (Bruker, 2001); cell refinement: SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Sheldrick, 2001); software used to prepare material for publication: SHELXTL.
C19H19N3OS | F(000) = 1424 |
Mr = 337.43 | Dx = 1.315 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 3147 reflections |
a = 23.094 (3) Å | θ = 2.4–25.8° |
b = 8.5709 (10) Å | µ = 0.20 mm−1 |
c = 17.271 (2) Å | T = 299 K |
β = 94.503 (2)° | Plate, colourless |
V = 3408.1 (7) Å3 | 0.30 × 0.20 × 0.06 mm |
Z = 8 |
Bruker SMART CCD area-detector diffractometer | 2613 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.044 |
Graphite monochromator | θmax = 26.0°, θmin = 1.8° |
φ and ω scans | h = −27→28 |
12733 measured reflections | k = −10→10 |
3323 independent reflections | l = −21→21 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.054 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.153 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + 2.2147P] where P = (Fo2 + 2Fc2)/3 |
3323 reflections | (Δ/σ)max < 0.001 |
217 parameters | Δρmax = 0.23 e Å−3 |
0 restraints | Δρmin = −0.29 e Å−3 |
C19H19N3OS | V = 3408.1 (7) Å3 |
Mr = 337.43 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 23.094 (3) Å | µ = 0.20 mm−1 |
b = 8.5709 (10) Å | T = 299 K |
c = 17.271 (2) Å | 0.30 × 0.20 × 0.06 mm |
β = 94.503 (2)° |
Bruker SMART CCD area-detector diffractometer | 2613 reflections with I > 2σ(I) |
12733 measured reflections | Rint = 0.044 |
3323 independent reflections |
R[F2 > 2σ(F2)] = 0.054 | 0 restraints |
wR(F2) = 0.153 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.23 e Å−3 |
3323 reflections | Δρmin = −0.29 e Å−3 |
217 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.39367 (11) | −0.0658 (3) | 0.13067 (14) | 0.0543 (6) | |
C2 | 0.41197 (13) | −0.2289 (4) | 0.15237 (19) | 0.0809 (9) | |
H2A | 0.3879 | −0.3051 | 0.1235 | 0.097* | |
H2B | 0.4099 | −0.2471 | 0.2075 | 0.097* | |
C3 | 0.47452 (15) | −0.2359 (5) | 0.1303 (2) | 0.1023 (12) | |
H3A | 0.4770 | −0.3026 | 0.0853 | 0.123* | |
H3B | 0.4994 | −0.2790 | 0.1729 | 0.123* | |
C4 | 0.49430 (14) | −0.0708 (5) | 0.1119 (2) | 0.1030 (13) | |
H4A | 0.5214 | −0.0306 | 0.1528 | 0.124* | |
H4B | 0.5121 | −0.0673 | 0.0629 | 0.124* | |
C5 | 0.43829 (11) | 0.0173 (3) | 0.10746 (16) | 0.0630 (7) | |
C6 | 0.34115 (9) | 0.0224 (2) | 0.12941 (13) | 0.0442 (5) | |
C7 | 0.34809 (9) | 0.1721 (3) | 0.10331 (13) | 0.0442 (5) | |
C8 | 0.28480 (9) | −0.0255 (2) | 0.14761 (13) | 0.0420 (5) | |
C9 | 0.25506 (9) | 0.2454 (2) | 0.11414 (12) | 0.0380 (5) | |
C10 | 0.16339 (9) | 0.3712 (2) | 0.15540 (14) | 0.0477 (6) | |
H10A | 0.1720 | 0.3276 | 0.2068 | 0.057* | |
H10B | 0.1291 | 0.3206 | 0.1309 | 0.057* | |
C11 | 0.15533 (11) | 0.5480 (2) | 0.15893 (16) | 0.0573 (7) | |
H11A | 0.1152 | 0.5750 | 0.1656 | 0.069* | |
H11B | 0.1801 | 0.5934 | 0.2010 | 0.069* | |
C12 | 0.17302 (11) | 0.6016 (2) | 0.08106 (16) | 0.0559 (6) | |
H12A | 0.1814 | 0.7125 | 0.0813 | 0.067* | |
H12B | 0.1431 | 0.5791 | 0.0400 | 0.067* | |
C13 | 0.22717 (10) | 0.5061 (2) | 0.07185 (14) | 0.0498 (6) | |
H13A | 0.2340 | 0.4931 | 0.0175 | 0.060* | |
H13B | 0.2610 | 0.5541 | 0.0988 | 0.060* | |
C14 | 0.18283 (9) | 0.0414 (2) | 0.14200 (13) | 0.0399 (5) | |
C15 | 0.16433 (11) | −0.0078 (3) | 0.21238 (15) | 0.0542 (6) | |
H15 | 0.1890 | −0.0014 | 0.2575 | 0.065* | |
C16 | 0.10902 (13) | −0.0664 (3) | 0.2147 (2) | 0.0689 (8) | |
H16 | 0.0962 | −0.0998 | 0.2616 | 0.083* | |
C17 | 0.07258 (12) | −0.0756 (3) | 0.1479 (2) | 0.0726 (9) | |
H17 | 0.0353 | −0.1159 | 0.1496 | 0.087* | |
C18 | 0.09132 (11) | −0.0254 (3) | 0.07868 (19) | 0.0634 (7) | |
H18 | 0.0663 | −0.0298 | 0.0338 | 0.076* | |
C19 | 0.14687 (10) | 0.0317 (2) | 0.07496 (15) | 0.0482 (6) | |
H19 | 0.1598 | 0.0632 | 0.0277 | 0.058* | |
N1 | 0.24184 (7) | 0.09507 (17) | 0.13812 (10) | 0.0381 (4) | |
N2 | 0.30734 (8) | 0.28498 (19) | 0.09507 (11) | 0.0443 (4) | |
N3 | 0.21341 (7) | 0.35543 (18) | 0.10766 (10) | 0.0402 (4) | |
O1 | 0.27071 (7) | −0.15575 (17) | 0.16791 (11) | 0.0606 (5) | |
S1 | 0.41935 (3) | 0.20650 (8) | 0.08088 (5) | 0.0691 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0435 (14) | 0.0687 (14) | 0.0502 (14) | 0.0220 (11) | 0.0003 (11) | −0.0011 (11) |
C2 | 0.0651 (19) | 0.0815 (19) | 0.097 (2) | 0.0427 (16) | 0.0127 (17) | 0.0180 (16) |
C3 | 0.071 (2) | 0.114 (3) | 0.123 (3) | 0.055 (2) | 0.015 (2) | 0.006 (2) |
C4 | 0.055 (2) | 0.137 (3) | 0.121 (3) | 0.048 (2) | 0.027 (2) | 0.028 (2) |
C5 | 0.0397 (14) | 0.0848 (18) | 0.0645 (17) | 0.0224 (13) | 0.0047 (12) | 0.0015 (13) |
C6 | 0.0369 (12) | 0.0485 (11) | 0.0468 (13) | 0.0123 (9) | 0.0009 (9) | −0.0022 (9) |
C7 | 0.0336 (11) | 0.0512 (11) | 0.0479 (13) | 0.0046 (9) | 0.0026 (9) | −0.0035 (10) |
C8 | 0.0382 (12) | 0.0386 (10) | 0.0480 (13) | 0.0091 (8) | −0.0043 (9) | −0.0017 (9) |
C9 | 0.0387 (12) | 0.0329 (9) | 0.0421 (12) | 0.0034 (8) | 0.0010 (9) | −0.0054 (8) |
C10 | 0.0371 (12) | 0.0395 (10) | 0.0671 (15) | 0.0074 (9) | 0.0089 (11) | −0.0094 (10) |
C11 | 0.0547 (15) | 0.0385 (11) | 0.0794 (18) | 0.0105 (10) | 0.0107 (13) | −0.0122 (11) |
C12 | 0.0560 (15) | 0.0366 (11) | 0.0728 (17) | 0.0117 (10) | −0.0089 (12) | −0.0043 (10) |
C13 | 0.0568 (15) | 0.0346 (10) | 0.0576 (15) | 0.0055 (9) | 0.0028 (11) | 0.0014 (9) |
C14 | 0.0336 (11) | 0.0279 (9) | 0.0584 (13) | 0.0053 (8) | 0.0048 (10) | −0.0011 (8) |
C15 | 0.0542 (15) | 0.0460 (12) | 0.0632 (16) | 0.0041 (10) | 0.0101 (12) | 0.0042 (11) |
C16 | 0.0641 (18) | 0.0481 (13) | 0.099 (2) | 0.0045 (12) | 0.0351 (18) | 0.0120 (13) |
C17 | 0.0427 (15) | 0.0408 (12) | 0.136 (3) | −0.0017 (10) | 0.0174 (18) | 0.0003 (15) |
C18 | 0.0404 (14) | 0.0461 (12) | 0.101 (2) | 0.0009 (10) | −0.0098 (14) | −0.0076 (13) |
C19 | 0.0428 (13) | 0.0361 (10) | 0.0653 (15) | 0.0062 (9) | 0.0009 (11) | −0.0031 (10) |
N1 | 0.0322 (9) | 0.0332 (8) | 0.0486 (10) | 0.0055 (7) | 0.0018 (8) | −0.0009 (7) |
N2 | 0.0362 (10) | 0.0399 (9) | 0.0573 (12) | 0.0035 (7) | 0.0064 (8) | −0.0003 (8) |
N3 | 0.0376 (10) | 0.0333 (8) | 0.0498 (10) | 0.0060 (7) | 0.0038 (8) | −0.0018 (7) |
O1 | 0.0515 (10) | 0.0365 (8) | 0.0931 (14) | 0.0106 (7) | −0.0001 (9) | 0.0087 (8) |
S1 | 0.0379 (4) | 0.0785 (5) | 0.0927 (6) | 0.0067 (3) | 0.0174 (4) | 0.0095 (4) |
C1—C5 | 1.340 (4) | C10—H10A | 0.9700 |
C1—C6 | 1.428 (3) | C10—H10B | 0.9700 |
C1—C2 | 1.499 (3) | C11—C12 | 1.507 (4) |
C2—C3 | 1.524 (4) | C11—H11A | 0.9700 |
C2—H2A | 0.9700 | C11—H11B | 0.9700 |
C2—H2B | 0.9700 | C12—C13 | 1.514 (3) |
C3—C4 | 1.528 (5) | C12—H12A | 0.9700 |
C3—H3A | 0.9700 | C12—H12B | 0.9700 |
C3—H3B | 0.9700 | C13—N3 | 1.477 (3) |
C4—C5 | 1.495 (3) | C13—H13A | 0.9700 |
C4—H4A | 0.9700 | C13—H13B | 0.9700 |
C4—H4B | 0.9700 | C14—C19 | 1.373 (3) |
C5—S1 | 1.732 (3) | C14—C15 | 1.385 (3) |
C6—C7 | 1.373 (3) | C14—N1 | 1.445 (3) |
C6—C8 | 1.423 (3) | C15—C16 | 1.376 (4) |
C7—N2 | 1.350 (3) | C15—H15 | 0.9300 |
C7—S1 | 1.745 (2) | C16—C17 | 1.376 (4) |
C8—O1 | 1.222 (3) | C16—H16 | 0.9300 |
C8—N1 | 1.433 (2) | C17—C18 | 1.372 (4) |
C9—N2 | 1.321 (3) | C17—H17 | 0.9300 |
C9—N3 | 1.345 (2) | C18—C19 | 1.379 (3) |
C9—N1 | 1.395 (2) | C18—H18 | 0.9300 |
C10—N3 | 1.477 (3) | C19—H19 | 0.9300 |
C10—C11 | 1.528 (3) | ||
C5—C1—C6 | 112.7 (2) | C12—C11—H11A | 111.2 |
C5—C1—C2 | 111.2 (2) | C10—C11—H11A | 111.2 |
C6—C1—C2 | 136.0 (2) | C12—C11—H11B | 111.2 |
C1—C2—C3 | 103.2 (3) | C10—C11—H11B | 111.2 |
C1—C2—H2A | 111.1 | H11A—C11—H11B | 109.1 |
C3—C2—H2A | 111.1 | C11—C12—C13 | 102.31 (18) |
C1—C2—H2B | 111.1 | C11—C12—H12A | 111.3 |
C3—C2—H2B | 111.1 | C13—C12—H12A | 111.3 |
H2A—C2—H2B | 109.1 | C11—C12—H12B | 111.3 |
C2—C3—C4 | 108.7 (2) | C13—C12—H12B | 111.3 |
C2—C3—H3A | 110.0 | H12A—C12—H12B | 109.2 |
C4—C3—H3A | 110.0 | N3—C13—C12 | 102.83 (18) |
C2—C3—H3B | 110.0 | N3—C13—H13A | 111.2 |
C4—C3—H3B | 110.0 | C12—C13—H13A | 111.2 |
H3A—C3—H3B | 108.3 | N3—C13—H13B | 111.2 |
C5—C4—C3 | 102.0 (3) | C12—C13—H13B | 111.2 |
C5—C4—H4A | 111.4 | H13A—C13—H13B | 109.1 |
C3—C4—H4A | 111.4 | C19—C14—C15 | 120.9 (2) |
C5—C4—H4B | 111.4 | C19—C14—N1 | 119.35 (19) |
C3—C4—H4B | 111.4 | C15—C14—N1 | 119.6 (2) |
H4A—C4—H4B | 109.2 | C16—C15—C14 | 119.2 (3) |
C1—C5—C4 | 113.5 (3) | C16—C15—H15 | 120.4 |
C1—C5—S1 | 113.14 (18) | C14—C15—H15 | 120.4 |
C4—C5—S1 | 133.3 (2) | C15—C16—C17 | 120.3 (3) |
C7—C6—C8 | 118.32 (18) | C15—C16—H16 | 119.8 |
C7—C6—C1 | 112.3 (2) | C17—C16—H16 | 119.8 |
C8—C6—C1 | 129.4 (2) | C18—C17—C16 | 119.9 (2) |
N2—C7—C6 | 127.3 (2) | C18—C17—H17 | 120.1 |
N2—C7—S1 | 121.15 (17) | C16—C17—H17 | 120.1 |
C6—C7—S1 | 111.55 (16) | C17—C18—C19 | 120.7 (3) |
O1—C8—C6 | 126.57 (19) | C17—C18—H18 | 119.7 |
O1—C8—N1 | 119.61 (19) | C19—C18—H18 | 119.7 |
C6—C8—N1 | 113.80 (17) | C14—C19—C18 | 119.0 (2) |
N2—C9—N3 | 117.44 (18) | C14—C19—H19 | 120.5 |
N2—C9—N1 | 122.49 (17) | C18—C19—H19 | 120.5 |
N3—C9—N1 | 120.04 (18) | C9—N1—C8 | 122.32 (17) |
N3—C10—C11 | 102.49 (17) | C9—N1—C14 | 122.50 (16) |
N3—C10—H10A | 111.3 | C8—N1—C14 | 114.33 (15) |
C11—C10—H10A | 111.3 | C9—N2—C7 | 115.67 (18) |
N3—C10—H10B | 111.3 | C9—N3—C13 | 118.14 (17) |
C11—C10—H10B | 111.3 | C9—N3—C10 | 127.09 (18) |
H10A—C10—H10B | 109.2 | C13—N3—C10 | 110.91 (15) |
C12—C11—C10 | 102.94 (18) | C5—S1—C7 | 90.33 (11) |
C5—C1—C2—C3 | −5.6 (3) | N1—C14—C19—C18 | 177.51 (18) |
C6—C1—C2—C3 | 175.2 (3) | C17—C18—C19—C14 | −1.7 (3) |
C1—C2—C3—C4 | 10.9 (4) | N2—C9—N1—C8 | 3.2 (3) |
C2—C3—C4—C5 | −11.9 (4) | N3—C9—N1—C8 | −178.62 (18) |
C6—C1—C5—C4 | 177.3 (3) | N2—C9—N1—C14 | −165.56 (19) |
C2—C1—C5—C4 | −2.1 (4) | N3—C9—N1—C14 | 12.6 (3) |
C6—C1—C5—S1 | −1.1 (3) | O1—C8—N1—C9 | −179.2 (2) |
C2—C1—C5—S1 | 179.5 (2) | C6—C8—N1—C9 | −0.8 (3) |
C3—C4—C5—C1 | 8.7 (4) | O1—C8—N1—C14 | −9.5 (3) |
C3—C4—C5—S1 | −173.2 (3) | C6—C8—N1—C14 | 168.88 (18) |
C5—C1—C6—C7 | 1.1 (3) | C19—C14—N1—C9 | 63.7 (2) |
C2—C1—C6—C7 | −179.7 (3) | C15—C14—N1—C9 | −119.9 (2) |
C5—C1—C6—C8 | 178.0 (2) | C19—C14—N1—C8 | −106.0 (2) |
C2—C1—C6—C8 | −2.8 (5) | C15—C14—N1—C8 | 70.4 (2) |
C8—C6—C7—N2 | 2.7 (4) | N3—C9—N2—C7 | 179.18 (19) |
C1—C6—C7—N2 | 180.0 (2) | N1—C9—N2—C7 | −2.6 (3) |
C8—C6—C7—S1 | −177.87 (16) | C6—C7—N2—C9 | −0.3 (3) |
C1—C6—C7—S1 | −0.5 (3) | S1—C7—N2—C9 | −179.74 (15) |
C7—C6—C8—O1 | 176.4 (2) | N2—C9—N3—C13 | 6.6 (3) |
C1—C6—C8—O1 | −0.4 (4) | N1—C9—N3—C13 | −171.66 (18) |
C7—C6—C8—N1 | −1.9 (3) | N2—C9—N3—C10 | −149.2 (2) |
C1—C6—C8—N1 | −178.7 (2) | N1—C9—N3—C10 | 32.6 (3) |
N3—C10—C11—C12 | 33.1 (2) | C12—C13—N3—C9 | −175.30 (18) |
C10—C11—C12—C13 | −43.4 (2) | C12—C13—N3—C10 | −15.8 (2) |
C11—C12—C13—N3 | 36.1 (2) | C11—C10—N3—C9 | 146.5 (2) |
C19—C14—C15—C16 | −0.3 (3) | C11—C10—N3—C13 | −10.7 (2) |
N1—C14—C15—C16 | −176.64 (19) | C1—C5—S1—C7 | 0.7 (2) |
C14—C15—C16—C17 | −0.1 (3) | C4—C5—S1—C7 | −177.4 (3) |
C15—C16—C17—C18 | −0.4 (4) | N2—C7—S1—C5 | 179.4 (2) |
C16—C17—C18—C19 | 1.3 (4) | C6—C7—S1—C5 | −0.06 (19) |
C15—C14—C19—C18 | 1.2 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C10—H10A···O1i | 0.97 | 2.45 | 3.309 (3) | 148 |
C10—H10B···Cg5 | 0.97 | 2.90 | 3.429 (2) | 115 |
C12—H12A···Cg5ii | 0.97 | 2.89 | 3.630 (2) | 134 |
C12—H12B···Cg1iii | 0.97 | 2.93 | 3.790 (3) | 148 |
C13—H13A···Cg4iii | 0.97 | 2.67 | 3.542 (3) | 150 |
Symmetry codes: (i) −x+1/2, y+1/2, −z+1/2; (ii) x, y+1, z; (iii) −x+1/2, −y+1/2, −z. |
Experimental details
Crystal data | |
Chemical formula | C19H19N3OS |
Mr | 337.43 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 299 |
a, b, c (Å) | 23.094 (3), 8.5709 (10), 17.271 (2) |
β (°) | 94.503 (2) |
V (Å3) | 3408.1 (7) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.20 |
Crystal size (mm) | 0.30 × 0.20 × 0.06 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12733, 3323, 2613 |
Rint | 0.044 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.054, 0.153, 1.05 |
No. of reflections | 3323 |
No. of parameters | 217 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.23, −0.29 |
Computer programs: SMART (Bruker, 2001), SAINT-Plus (Bruker, 2001), SAINT-Plus, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Sheldrick, 2001), SHELXTL.
D—H···A | D—H | H···A | D···A | D—H···A |
C10—H10A···O1i | 0.97 | 2.45 | 3.309 (3) | 148 |
C10—H10B···Cg5 | 0.97 | 2.90 | 3.429 (2) | 115 |
C12—H12A···Cg5ii | 0.97 | 2.89 | 3.630 (2) | 134 |
C12—H12B···Cg1iii | 0.97 | 2.93 | 3.790 (3) | 148 |
C13—H13A···Cg4iii | 0.97 | 2.67 | 3.542 (3) | 150 |
Symmetry codes: (i) −x+1/2, y+1/2, −z+1/2; (ii) x, y+1, z; (iii) −x+1/2, −y+1/2, −z. |
Subscribe to Acta Crystallographica Section E: Crystallographic Communications
The full text of this article is available to subscribers to the journal.
- Information on subscribing
- Sample issue
- If you have already subscribed, you may need to register
Derivatives of pyrimidinone are attracting increasing attention in the synthetic chemistry community because of the important role played by such systems in many natural products, also in antibiotics and drugs (Modica et al., 2004; Panico et al., 2001; Ding et al., 2004). Recently, we have been interested in the synthesis of new thieno[3,2-d]pyrimidone derivatives. Some related X-ray crystal structure reports for pyrimidinone derivatives have been published (Zheng et al., 2006; Xu et al., 2005). Here, the structure of the title compound, which may be used as a new precursor for obtaining bioactive molecules, is reported (Fig. 1). In the molecule, the bond lengths and angles are unexceptional. The fused ring of the thieno[3,2-d]pyrimidone system is essentially planar, making a dihedral angle of 68.64 (9)° with the pnenyl C14—C19 ring. C1—C5 and C10/C11/C12/C13/N3 rings have a total puckering amplitude of 0.118 (4) and 0.418 (3) Å, respectively (Cremer & Pople, 1975) and a distorted half-chair form [φ = 80.0 (2) and 93.2 (3)°]. The crystal packing is mainly stabilized by C—H···O and C—H···π interactions (Table 1 and Fig. 2). There are no π-π interactions.