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In the title compound, [Zn(NCS)2(C5H6N2)2], the Zn atom adopts a distorted tetra­hedral coordination geometry and is bonded to two N atoms from thio­cyanate anions and two pyridyl N atoms. The Zn atom and the two thio­cyanate ligands are located on a mirror plane. The crystal structure is stabilized by N—H...S hydrogen bonds.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536806054791/hy2035sup1.cif
Contains datablocks I, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536806054791/hy2035Isup2.hkl
Contains datablock I

CCDC reference: 615080

Key indicators

  • Single-crystal X-ray study
  • T = 298 K
  • Mean [sigma](C-C) = 0.004 Å
  • R factor = 0.029
  • wR factor = 0.087
  • Data-to-parameter ratio = 13.9

checkCIF/PLATON results

No syntax errors found



Alert level C PLAT062_ALERT_4_C Rescale T(min) & T(max) by ..................... 0.92 PLAT125_ALERT_4_C No _symmetry_space_group_name_Hall Given ....... ? PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C6 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C7 PLAT420_ALERT_2_C D-H Without Acceptor N2 - H2A ... ? PLAT480_ALERT_4_C Long H...A H-Bond Reported H2A .. S2 .. 3.01 Ang.
Alert level G ABSTM02_ALERT_3_G When printed, the submitted absorption T values will be replaced by the scaled T values. Since the ratio of scaled T's is identical to the ratio of reported T values, the scaling does not imply a change to the absorption corrections used in the study. Ratio of Tmax expected/reported 0.917 Tmax scaled 0.494 Tmin scaled 0.450
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 6 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 3 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check

Computing details top

Data collection: SMART (Siemens, 1996); cell refinement: SAINT (Siemens, 1996); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997a); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997a); molecular graphics: SHELXTL (Sheldrick, 1997b); software used to prepare material for publication: SHELXTL.

Bis(3-aminopyridine-κN)diisothiocyanatozinc(II) top
Crystal data top
[Zn(NCS)2(C5H6N2)2]Dx = 1.543 Mg m3
Mr = 369.77Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, PnmaCell parameters from 2672 reflections
a = 10.174 (3) Åθ = 2.3–24.3°
b = 12.312 (3) ŵ = 1.81 mm1
c = 12.711 (4) ÅT = 298 K
V = 1592.2 (8) Å3Rod, colorless
Z = 40.46 × 0.43 × 0.39 mm
F(000) = 752
Data collection top
Bruker SMART APEX CCD area-detector
diffractometer
1469 independent reflections
Radiation source: fine-focus sealed tube1107 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.033
φ and ω scansθmax = 25.0°, θmin = 2.3°
Absorption correction: multi-scan
(SADABS; Sheldrick, 1996)
h = 1211
Tmin = 0.491, Tmax = 0.539k = 1410
7856 measured reflectionsl = 1415
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.087H-atom parameters constrained
S = 1.09 w = 1/[σ2(Fo2) + (0.0433P)2 + 0.5218P]
where P = (Fo2 + 2Fc2)/3
1469 reflections(Δ/σ)max < 0.001
106 parametersΔρmax = 0.20 e Å3
2 restraintsΔρmin = 0.42 e Å3
Special details top

Experimental. Selected FT–IR (KBr, cm-1): υ(SCN-1) 2112 (s), 2091 (s).

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Zn10.63246 (4)0.75000.71922 (3)0.04513 (18)
N10.5234 (2)0.61425 (16)0.73663 (16)0.0428 (5)
N20.3428 (3)0.4845 (2)0.9495 (2)0.0711 (8)
H2A0.36360.52671.00080.085*
H2B0.29190.42990.96040.085*
N30.7441 (3)0.75000.8441 (3)0.0582 (9)
N40.7142 (3)0.75000.5820 (3)0.0557 (8)
S10.86459 (11)0.75001.04013 (9)0.0612 (3)
S20.86821 (11)0.75000.40309 (9)0.0675 (3)
C10.4728 (2)0.5917 (2)0.8316 (2)0.0447 (6)
H10.49400.63730.88750.054*
C20.3905 (3)0.5041 (2)0.8509 (2)0.0479 (7)
C30.3630 (3)0.4360 (3)0.7657 (2)0.0608 (8)
H30.30920.37560.77440.073*
C40.4161 (3)0.4590 (3)0.6694 (2)0.0635 (8)
H40.39810.41430.61220.076*
C50.4957 (3)0.5477 (2)0.6571 (2)0.0531 (7)
H50.53150.56190.59120.064*
C60.7931 (3)0.75000.9260 (3)0.0443 (8)
C70.7765 (4)0.75000.5068 (3)0.0424 (8)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Zn10.0434 (3)0.0453 (3)0.0468 (3)0.0000.0059 (2)0.000
N10.0424 (12)0.0410 (12)0.0450 (12)0.0029 (9)0.0039 (10)0.0006 (10)
N20.097 (2)0.0605 (17)0.0560 (16)0.0259 (15)0.0146 (14)0.0051 (13)
N30.049 (2)0.065 (2)0.060 (2)0.0000.0049 (18)0.000
N40.052 (2)0.061 (2)0.054 (2)0.0000.0100 (17)0.000
S10.0632 (7)0.0630 (7)0.0572 (6)0.0000.0095 (5)0.000
S20.0713 (8)0.0836 (8)0.0475 (6)0.0000.0173 (5)0.000
C10.0488 (14)0.0404 (14)0.0448 (14)0.0014 (12)0.0008 (12)0.0020 (12)
C20.0544 (17)0.0393 (15)0.0501 (16)0.0016 (12)0.0025 (13)0.0036 (12)
C30.073 (2)0.0457 (17)0.0635 (19)0.0134 (14)0.0010 (16)0.0007 (15)
C40.081 (2)0.0546 (18)0.0548 (18)0.0089 (17)0.0040 (16)0.0146 (15)
C50.0620 (18)0.0533 (17)0.0439 (16)0.0029 (14)0.0049 (13)0.0056 (14)
C60.036 (2)0.038 (2)0.058 (2)0.0000.0032 (16)0.000
C70.044 (2)0.0399 (19)0.0431 (19)0.0000.0008 (14)0.000
Geometric parameters (Å, º) top
Zn1—N41.932 (3)S1—C61.623 (4)
Zn1—N31.952 (4)S2—C71.615 (4)
Zn1—N12.018 (2)C1—C21.387 (4)
Zn1—N1i2.018 (2)C1—H10.9300
N1—C51.332 (3)C2—C31.398 (4)
N1—C11.342 (3)C3—C41.368 (4)
N2—C21.366 (4)C3—H30.9300
N2—H2A0.8600C4—C51.368 (4)
N2—H2B0.8600C4—H40.9300
N3—C61.154 (5)C5—H50.9300
N4—C71.147 (5)
N4—Zn1—N3118.92 (15)C2—C1—H1118.3
N4—Zn1—N1109.61 (8)N2—C2—C1121.0 (3)
N3—Zn1—N1103.33 (8)N2—C2—C3122.3 (3)
N4—Zn1—N1i109.61 (8)C1—C2—C3116.8 (3)
N3—Zn1—N1i103.33 (8)C4—C3—C2119.4 (3)
N1—Zn1—N1i111.82 (12)C4—C3—H3120.3
C5—N1—C1118.3 (2)C2—C3—H3120.3
C5—N1—Zn1122.87 (18)C3—C4—C5120.1 (3)
C1—N1—Zn1118.74 (17)C3—C4—H4119.9
C2—N2—H2A120.0C5—C4—H4119.9
C2—N2—H2B120.0N1—C5—C4122.0 (3)
H2A—N2—H2B120.0N1—C5—H5119.0
C6—N3—Zn1170.1 (3)C4—C5—H5119.0
C7—N4—Zn1172.0 (3)N3—C6—S1179.0 (4)
N1—C1—C2123.5 (2)N4—C7—S2178.2 (4)
N1—C1—H1118.3
Symmetry code: (i) x, y+3/2, z.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N2—H2B···S1ii0.862.733.578 (3)170
N2—H2A···S2iii0.863.013.777 (3)150
Symmetry codes: (ii) x+1, y+1, z+2; (iii) x1/2, y, z+3/2.
 

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