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The title compound, C10H10Cl2N2, forms centrosymmetric head-to-tail face-to-face dimers with the n-propyl groups exo to the dichlorobenzimidazole groups, which are effectively planar. Within a dimer, the least-squares planes are necessarily parallel and exhibit an interplanar spacing of 3.412 (2) Å, which lies near the short end of the range (3.3–3.8 Å) generally accepted to indicate π–π interactions. When viewed normal to the (100) planes, the structure appears as slanted columns of dimers arranged so as to form alternating –aromatic–aliphatic– layers parallel to the (001) planes.
Supporting information
CCDC reference: 251745
Key indicators
- Single-crystal X-ray study
- T = 297 K
- Mean (C-C) = 0.005 Å
- R factor = 0.064
- wR factor = 0.195
- Data-to-parameter ratio = 12.9
checkCIF/PLATON results
No syntax errors found
Alert level C
ABSTM02_ALERT_3_C The ratio of expected to reported Tmax/Tmin(RR') is < 0.90
Tmin and Tmax reported: 0.663 0.936
Tmin' and Tmax expected: 0.794 0.936
RR' = 0.835
Please check that your absorption correction is appropriate.
PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.97
PLAT061_ALERT_3_C Tmax/Tmin Range Test RR' too Large ............. 0.83
PLAT094_ALERT_2_C Ratio of Maximum / Minimum Residual Density .... 2.16
PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 2.69 Ratio
PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.13 Ratio
PLAT340_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 5
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
7 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
2 ALERT type 2 Indicator that the structure model may be wrong or deficient
5 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: SMART (Bruker, 2000); cell refinement: SAINT-Plus (Bruker, 2000); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPIII (Burnett & Johnson, 1996) and ORTEP-32 (Farrugia, 1997); software used to prepare material for publication: SHELXTL (Bruker, 2000).
5,6-Dichloro-1-propyl-1
H-benzimidazole
top
Crystal data top
C10H10Cl2N2 | Z = 2 |
Mr = 229.11 | F(000) = 236 |
Triclinic, P1 | Dx = 1.392 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.2342 (6) Å | Cell parameters from 1011 reflections |
b = 9.4516 (8) Å | θ = 3.4–25.0° |
c = 9.8012 (9) Å | µ = 0.56 mm−1 |
α = 104.207 (7)° | T = 297 K |
β = 91.138 (8)° | Rod, colorless |
γ = 101.849 (7)° | 0.41 × 0.22 × 0.12 mm |
V = 546.42 (9) Å3 | |
Data collection top
Bruker SMART APEX CCD area-detector diffractometer | 1905 independent reflections |
Radiation source: fine-focus sealed tube | 1690 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.045 |
ω scans | θmax = 25.1°, θmin = 2.7° |
Absorption correction: multi-scan (SADABS; Blessing, 1995) | h = −7→7 |
Tmin = 0.663, Tmax = 0.936 | k = −11→11 |
5615 measured reflections | l = −10→11 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.064 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.195 | All H-atom parameters refined |
S = 1.00 | w = 1/[σ2(Fo2) + (0.1415P)2 + 0.179P] where P = (Fo2 + 2Fc2)/3 |
1905 reflections | (Δ/σ)max < 0.001 |
148 parameters | Δρmax = 0.60 e Å−3 |
0 restraints | Δρmin = −0.28 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cl15 | 0.18363 (14) | 0.07662 (8) | 0.39227 (9) | 0.0632 (4) | |
Cl16 | 0.63275 (17) | 0.10886 (10) | 0.24992 (14) | 0.0878 (5) | |
N11 | 0.5513 (4) | 0.6519 (3) | 0.2826 (2) | 0.0459 (6) | |
N13 | 0.2228 (4) | 0.6263 (3) | 0.3750 (3) | 0.0573 (7) | |
C10 | 0.9570 (9) | 0.7665 (7) | 0.0254 (5) | 0.1108 (18) | |
H10A | 0.9807 | 0.8728 | 0.0631 | 0.166* | |
H10B | 0.9476 | 0.7435 | −0.0758 | 0.166* | |
H10C | 1.0773 | 0.7311 | 0.0579 | 0.166* | |
C11 | 0.4967 (4) | 0.5068 (3) | 0.2952 (3) | 0.0412 (6) | |
C12 | 0.3805 (5) | 0.7148 (4) | 0.3314 (3) | 0.0544 (8) | |
C13 | 0.2930 (4) | 0.4925 (3) | 0.3531 (3) | 0.0440 (7) | |
C14 | 0.1950 (5) | 0.3600 (3) | 0.3846 (3) | 0.0464 (7) | |
C15 | 0.3019 (5) | 0.2436 (3) | 0.3526 (3) | 0.0449 (7) | |
C16 | 0.5041 (5) | 0.2589 (3) | 0.2915 (3) | 0.0501 (7) | |
C17 | 0.6058 (5) | 0.3909 (3) | 0.2630 (3) | 0.0482 (7) | |
C18 | 0.7521 (5) | 0.7248 (4) | 0.2318 (3) | 0.0503 (7) | |
C19 | 0.7480 (7) | 0.6922 (5) | 0.0736 (4) | 0.0811 (11) | |
H19A | 0.7236 | 0.5850 | 0.0343 | 0.097* | |
H19B | 0.6265 | 0.7264 | 0.0386 | 0.097* | |
H12 | 0.392 (6) | 0.814 (5) | 0.336 (4) | 0.064 (10)* | |
H14 | 0.066 (7) | 0.346 (4) | 0.420 (4) | 0.077 (12)* | |
H17 | 0.730 (6) | 0.395 (4) | 0.228 (4) | 0.062 (10)* | |
H18A | 0.869 (5) | 0.694 (4) | 0.268 (3) | 0.053 (8)* | |
H18B | 0.773 (5) | 0.829 (4) | 0.283 (3) | 0.053 (8)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cl15 | 0.0666 (6) | 0.0436 (5) | 0.0829 (7) | 0.0032 (4) | 0.0168 (4) | 0.0289 (4) |
Cl16 | 0.0820 (7) | 0.0511 (6) | 0.1471 (11) | 0.0323 (5) | 0.0489 (7) | 0.0386 (6) |
N11 | 0.0470 (13) | 0.0422 (13) | 0.0554 (13) | 0.0095 (10) | 0.0080 (11) | 0.0249 (10) |
N13 | 0.0527 (14) | 0.0513 (15) | 0.0787 (18) | 0.0204 (12) | 0.0172 (13) | 0.0280 (13) |
C10 | 0.109 (4) | 0.139 (4) | 0.068 (2) | −0.019 (3) | 0.027 (3) | 0.034 (3) |
C11 | 0.0430 (14) | 0.0427 (15) | 0.0415 (13) | 0.0074 (11) | 0.0041 (11) | 0.0189 (11) |
C12 | 0.0577 (18) | 0.0460 (17) | 0.0701 (19) | 0.0186 (14) | 0.0114 (15) | 0.0280 (15) |
C13 | 0.0413 (14) | 0.0468 (15) | 0.0478 (14) | 0.0107 (12) | 0.0056 (11) | 0.0182 (12) |
C14 | 0.0406 (15) | 0.0518 (17) | 0.0497 (15) | 0.0069 (13) | 0.0111 (13) | 0.0203 (13) |
C15 | 0.0461 (14) | 0.0403 (15) | 0.0489 (15) | 0.0042 (11) | 0.0062 (12) | 0.0165 (12) |
C16 | 0.0550 (16) | 0.0388 (15) | 0.0609 (17) | 0.0147 (12) | 0.0104 (13) | 0.0164 (13) |
C17 | 0.0425 (15) | 0.0490 (17) | 0.0586 (17) | 0.0119 (12) | 0.0182 (13) | 0.0210 (13) |
C18 | 0.0511 (17) | 0.0468 (17) | 0.0564 (17) | 0.0039 (13) | 0.0061 (13) | 0.0247 (14) |
C19 | 0.078 (2) | 0.098 (3) | 0.058 (2) | −0.007 (2) | 0.0105 (17) | 0.026 (2) |
Geometric parameters (Å, º) top
Cl15—C15 | 1.738 (3) | C10—C19 | 1.492 (6) |
Cl16—C16 | 1.737 (3) | C10—H10A | 0.9600 |
N11—C12 | 1.363 (4) | C10—H10B | 0.9600 |
N13—C12 | 1.305 (4) | C10—H10C | 0.9600 |
N11—C11 | 1.380 (3) | C12—H12 | 0.92 (4) |
N13—C13 | 1.391 (4) | C14—H14 | 0.88 (4) |
C11—C13 | 1.396 (4) | C17—H17 | 0.85 (4) |
C13—C14 | 1.385 (4) | C18—C19 | 1.503 (5) |
C14—C15 | 1.375 (4) | C18—H18A | 0.93 (3) |
C15—C16 | 1.403 (4) | C18—H18B | 0.97 (3) |
C16—C17 | 1.375 (4) | C19—H19A | 0.9700 |
C11—C17 | 1.381 (4) | C19—H19B | 0.9700 |
N11—C18 | 1.459 (4) | | |
| | | |
C12—N11—C11 | 105.5 (2) | C14—C15—C16 | 121.1 (3) |
C12—N11—C18 | 126.9 (3) | C14—C15—Cl15 | 118.7 (2) |
C11—N11—C18 | 127.5 (2) | C16—C15—Cl15 | 120.2 (2) |
C12—N13—C13 | 103.9 (3) | C17—C16—C15 | 121.7 (3) |
C19—C10—H10A | 109.5 | C17—C16—Cl16 | 118.3 (2) |
C19—C10—H10B | 109.5 | C15—C16—Cl16 | 120.0 (2) |
H10A—C10—H10B | 109.5 | C16—C17—C11 | 116.6 (3) |
C19—C10—H10C | 109.5 | C16—C17—H17 | 118 (2) |
H10A—C10—H10C | 109.5 | C11—C17—H17 | 126 (2) |
H10B—C10—H10C | 109.5 | N11—C18—C19 | 113.5 (3) |
N11—C11—C17 | 131.8 (3) | N11—C18—H18A | 107 (2) |
N11—C11—C13 | 105.7 (2) | C19—C18—H18A | 111 (2) |
C17—C11—C13 | 122.5 (3) | N11—C18—H18B | 104.1 (19) |
N13—C12—N11 | 114.8 (3) | C19—C18—H18B | 116.7 (19) |
N13—C12—H12 | 127 (2) | H18A—C18—H18B | 104 (3) |
N11—C12—H12 | 118 (2) | C10—C19—C18 | 112.0 (3) |
C14—C13—N13 | 129.6 (3) | C10—C19—H19A | 109.2 |
C14—C13—C11 | 120.3 (3) | C18—C19—H19A | 109.2 |
N13—C13—C11 | 110.1 (2) | C10—C19—H19B | 109.2 |
C15—C14—C13 | 117.7 (3) | C18—C19—H19B | 109.2 |
C15—C14—H14 | 119 (3) | H19A—C19—H19B | 107.9 |
C13—C14—H14 | 123 (3) | | |
| | | |
C12—N11—C11—C17 | −179.8 (3) | C11—C13—C14—C15 | −2.0 (4) |
C18—N11—C11—C17 | −1.4 (5) | C13—C14—C15—C16 | 0.6 (4) |
C12—N11—C11—C13 | −0.5 (3) | C13—C14—C15—Cl15 | 179.5 (2) |
C18—N11—C11—C13 | 177.9 (3) | C14—C15—C16—C17 | 1.1 (5) |
C13—N13—C12—N11 | −0.3 (4) | Cl15—C15—C16—C17 | −177.9 (2) |
C11—N11—C12—N13 | 0.5 (4) | C14—C15—C16—Cl16 | −179.0 (2) |
C18—N11—C12—N13 | −177.9 (3) | Cl15—C15—C16—Cl16 | 2.1 (4) |
C12—N13—C13—C14 | 177.5 (3) | C15—C16—C17—C11 | −1.2 (4) |
C12—N13—C13—C11 | −0.1 (3) | Cl16—C16—C17—C11 | 178.9 (2) |
N11—C11—C13—C14 | −177.5 (2) | N11—C11—C17—C16 | 178.9 (3) |
C17—C11—C13—C14 | 1.9 (4) | C13—C11—C17—C16 | −0.3 (4) |
N11—C11—C13—N13 | 0.4 (3) | C12—N11—C18—C19 | −99.2 (4) |
C17—C11—C13—N13 | 179.8 (3) | C11—N11—C18—C19 | 82.7 (4) |
N13—C13—C14—C15 | −179.4 (3) | N11—C18—C19—C10 | −179.1 (4) |
Bond lengths (Å) in the 5,6-dichlorobenzimidazole fragments of structures (I)
and (II) (molecules a and b); for molecules (IIa) and (IIb), s.u. values are
reported in the range 0.003–0.005Å. top | I | II, molecule a | II, molecule b |
C15-Cl15 | 1.738 (3) | 1.735 | 1.731 |
C16-Cl16 | 1.737 (3) | 1.726 | 1.734 |
N11-C12 | 1.363 (4) | 1.367 | 1.356 |
N13-C12 | 1.305 (4) | 1.308 | 1.311 |
N11-C11 | 1.380 (3) | 1.378 | 1.386 |
N13-C13 | 1.391 (4) | 1.391 | 1.393 |
C11-C13 | 1.396 (4) | 1.405 | 1.408 |
C13-C14 | 1.385 (4) | 1.387 | 1.400 |
C14-C15 | 1.375 (4) | 1.375 | 1.371 |
C15-C16 | 1.403 (4) | 1.405 | 1.400 |
C16-C17 | 1.375 (4) | 1.369 | 1.390 |
C11-C17 | 1.381 (4) | 1.387 | 1.386 |
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