Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270100012324/gs1109sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270100012324/gs1109IVsup2.hkl |
CCDC reference: 156157
A solution of 3-amino-5-methylpyrazole (2.0 mmol) and 4-oxo-4H-chromene-3-carbaldehyde (2.0 mmol) in ethanol (10 ml) was heated to reflux for 45 min. Cooling the solution to room temperature afforded bright yellow crystals of (IV) which were filtered out, washed with fresh ethanol and dried. Crystals suitable for X-ray diffraction were obtained after recrystallization from dimethylformamide (yield 80%, m.p. 442–445 K). Analysis calculated for C14H11N3O2: C 66.40, H 4.38, N 16.59%; found: C 66.32, H 4.25, N 16.45%.
H atoms were treated as riding, with C—H 0.95–0.98 Å and O—H 0.9483 Å. The position of the hydroxyl H atom was based on its position as found on a difference map.
Data collection: Kappa-CCD Server Software (Nonius, 1997); cell refinement: DENZO (Otwinowski & Minor, 1997); data reduction: DENZO; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2000); software used to prepare material for publication: SHELXL97 and PRPKAPPA (Ferguson, 1999).
C14H11N3O2 | F(000) = 528 |
Mr = 253.26 | Dx = 1.439 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 5.6004 (2) Å | Cell parameters from 2591 reflections |
b = 11.8172 (5) Å | θ = 3.6–27.5° |
c = 17.865 (7) Å | µ = 0.10 mm−1 |
β = 98.71 (16)° | T = 150 K |
V = 1168.67 (8) Å3 | Plate, yellow |
Z = 4 | 0.20 × 0.15 × 0.08 mm |
Nonius KAPPA CCD diffractometer | 2591 independent reflections |
Radiation source: fine-focus sealed X-ray tube | 1681 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
ϕ and ω scans with κ offsets | θmax = 27.5°, θmin = 3.6° |
Absorption correction: multi-scan (SORTAV; Blessing, 1995, 1997) | h = −7→7 |
Tmin = 0.980, Tmax = 0.993 | k = −11→15 |
8919 measured reflections | l = −22→22 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.052 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.144 | H-atom parameters constrained |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0749P)2 + 0.0357P] where P = (Fo2 + 2Fc2)/3 |
2591 reflections | (Δ/σ)max = 0.012 |
173 parameters | Δρmax = 0.21 e Å−3 |
0 restraints | Δρmin = −0.29 e Å−3 |
C14H11N3O2 | V = 1168.67 (8) Å3 |
Mr = 253.26 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 5.6004 (2) Å | µ = 0.10 mm−1 |
b = 11.8172 (5) Å | T = 150 K |
c = 17.865 (7) Å | 0.20 × 0.15 × 0.08 mm |
β = 98.71 (16)° |
Nonius KAPPA CCD diffractometer | 2591 independent reflections |
Absorption correction: multi-scan (SORTAV; Blessing, 1995, 1997) | 1681 reflections with I > 2σ(I) |
Tmin = 0.980, Tmax = 0.993 | Rint = 0.026 |
8919 measured reflections |
R[F2 > 2σ(F2)] = 0.052 | 0 restraints |
wR(F2) = 0.144 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.21 e Å−3 |
2591 reflections | Δρmin = −0.29 e Å−3 |
173 parameters |
Geometry. Mean-plane data from the final SHELXL97 refinement run:- Least-squares planes (x,y,z in crystal coordinates) and deviations from them (* indicates atom used to define plane) - 2.6310 (0.0045) x + 5.3853 (0.0100) y + 14.6225 (0.0096) z = 9.0365 (0.0046) * −0.0023 (0.0010) N1 * 0.0019 (0.0011) C2 * −0.0008 (0.0011) C3 * −0.0007 (0.0011) C3A * 0.0018 (0.0010) N8 Rms deviation of fitted atoms = 0.0016 − 2.6315 (0.0034) x + 5.3491 (0.0078) y + 14.6541 (0.0077) z = 9.0541 (0.0050) Angle to previous plane (with approximate e.s.d.) = 0.20 (0.12) * −0.0009 (0.0012) C3A * 0.0046 (0.0012) N4 * −0.0076 (0.0012) C5 * 0.0068 (0.0012) C6 * −0.0034 (0.0012) C7 * 0.0006 (0.0011) N8 Rms deviation of fitted atoms = 0.0048 − 2.6308 (0.0029) x + 5.3675 (0.0046) y + 14.6387 (0.0047) z = 9.0433 (0.0028) Angle to previous plane (with approximate e.s.d.) = 0.10 (0.09) * −0.0030 (0.0013) N1 * 0.0002 (0.0014) C2 * −0.0010 (0.0014) C3 * 0.0014 (0.0016) C3A * 0.0046 (0.0013) N4 * −0.0092 (0.0014) C5 * 0.0058 (0.0014) C6 * −0.0021 (0.0014) C7 * 0.0035 (0.0014) N8 Rms deviation of fitted atoms = 0.0043 − 3.0933 (0.0036) x − 3.1395 (0.0092) y + 15.4479 (0.0068) z = 10.7578 (0.0078) Angle to previous plane (with approximate e.s.d.) = 42.53 (0.05) * −0.0236 (0.0012) C11 * 0.0078 (0.0013) C12 * 0.0112 (0.0014) C13 * −0.0144 (0.0014) C14 * −0.0021 (0.0013) C15 * 0.0211 (0.0012) C16 Rms deviation of fitted atoms = 0.0153 − 3.9344 (0.0097) x − 0.0882 (0.0269) y + 14.4677 (0.0252) z = 9.1623 (0.0269) Angle to previous plane (with approximate e.s.d.) = 17.77 (1/5) * 0.0000 (0.0000) O9 * 0.0000 (0.0000) C9 * 0.0000 (0.0000) C11 − 0.3677 (0.0055) C16 − 0.6697 (0.0075) O16 Rms deviation of fitted atoms = 0.0000 |
x | y | z | Uiso*/Ueq | ||
N1 | 0.1100 (3) | 0.17904 (14) | 0.57168 (9) | 0.0311 (4) | |
C2 | −0.1011 (3) | 0.19732 (17) | 0.52727 (10) | 0.0305 (5) | |
C21 | −0.1395 (4) | 0.3051 (2) | 0.48346 (12) | 0.0425 (6) | |
C3 | −0.2660 (3) | 0.10919 (18) | 0.52987 (11) | 0.0325 (5) | |
C3a | −0.1491 (3) | 0.03148 (17) | 0.57953 (10) | 0.0273 (4) | |
N4 | −0.2130 (3) | −0.07073 (14) | 0.60574 (9) | 0.0306 (4) | |
C5 | −0.0481 (3) | −0.12267 (18) | 0.65346 (10) | 0.0292 (5) | |
C6 | 0.1862 (3) | −0.07906 (16) | 0.68062 (10) | 0.0268 (4) | |
C7 | 0.2486 (3) | 0.02342 (17) | 0.65371 (10) | 0.0270 (4) | |
N8 | 0.0800 (3) | 0.07713 (13) | 0.60410 (8) | 0.0267 (4) | |
C9 | 0.3563 (3) | −0.15406 (17) | 0.72926 (10) | 0.0284 (5) | |
O9 | 0.3277 (3) | −0.25768 (12) | 0.72083 (8) | 0.0386 (4) | |
C11 | 0.5575 (3) | −0.10958 (16) | 0.78422 (10) | 0.0256 (4) | |
C12 | 0.5663 (3) | 0.00237 (17) | 0.81077 (11) | 0.0307 (5) | |
C13 | 0.7652 (4) | 0.04235 (18) | 0.85895 (11) | 0.0331 (5) | |
C14 | 0.9587 (3) | −0.03014 (18) | 0.88131 (11) | 0.0348 (5) | |
C15 | 0.9530 (3) | −0.14124 (18) | 0.85838 (11) | 0.0325 (5) | |
C16 | 0.7520 (3) | −0.18242 (17) | 0.81126 (10) | 0.0265 (4) | |
O16 | 0.7557 (2) | −0.29223 (11) | 0.79074 (7) | 0.0331 (4) | |
H21A | −0.2643 | 0.3500 | 0.5026 | 0.064* | |
H21B | −0.1913 | 0.2878 | 0.4298 | 0.064* | |
H21C | 0.0118 | 0.3481 | 0.4892 | 0.064* | |
H3 | −0.4254 | 0.1041 | 0.5029 | 0.039* | |
H5 | −0.0879 | −0.1949 | 0.6713 | 0.035* | |
H7 | 0.4038 | 0.0555 | 0.6692 | 0.032* | |
H12 | 0.4336 | 0.0515 | 0.7954 | 0.037* | |
H13 | 0.7696 | 0.1183 | 0.8765 | 0.040* | |
H14 | 1.0977 | −0.0022 | 0.9131 | 0.042* | |
H15 | 1.0861 | −0.1897 | 0.8747 | 0.039* | |
H16 | 0.6027 | −0.3122 | 0.7636 | 0.040* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0330 (9) | 0.0262 (10) | 0.0329 (9) | 0.0001 (7) | 0.0006 (7) | 0.0034 (7) |
C2 | 0.0337 (11) | 0.0309 (12) | 0.0261 (10) | 0.0048 (9) | 0.0017 (8) | −0.0014 (8) |
C21 | 0.0513 (13) | 0.0384 (14) | 0.0365 (12) | 0.0067 (10) | 0.0026 (10) | 0.0074 (10) |
C3 | 0.0273 (10) | 0.0360 (13) | 0.0317 (10) | 0.0021 (9) | −0.0035 (8) | −0.0034 (9) |
C3a | 0.0235 (9) | 0.0297 (11) | 0.0279 (10) | −0.0005 (8) | 0.0014 (8) | −0.0052 (8) |
N4 | 0.0275 (9) | 0.0329 (10) | 0.0304 (9) | −0.0037 (7) | 0.0012 (7) | −0.0018 (7) |
C5 | 0.0312 (10) | 0.0276 (11) | 0.0284 (10) | −0.0025 (8) | 0.0033 (8) | −0.0007 (8) |
C6 | 0.0253 (10) | 0.0271 (11) | 0.0275 (10) | −0.0001 (8) | 0.0024 (8) | −0.0023 (8) |
C7 | 0.0223 (9) | 0.0290 (11) | 0.0279 (10) | 0.0031 (8) | −0.0016 (7) | −0.0030 (8) |
N8 | 0.0251 (8) | 0.0243 (9) | 0.0295 (8) | −0.0007 (6) | 0.0009 (6) | −0.0008 (7) |
C9 | 0.0292 (10) | 0.0247 (11) | 0.0314 (10) | 0.0000 (8) | 0.0047 (8) | −0.0001 (8) |
O9 | 0.0423 (9) | 0.0246 (9) | 0.0460 (9) | −0.0004 (6) | −0.0029 (7) | −0.0005 (6) |
C11 | 0.0281 (10) | 0.0230 (11) | 0.0258 (9) | 0.0004 (8) | 0.0039 (7) | 0.0005 (8) |
C12 | 0.0305 (10) | 0.0267 (11) | 0.0337 (10) | 0.0048 (8) | 0.0010 (8) | 0.0031 (9) |
C13 | 0.0399 (11) | 0.0245 (12) | 0.0332 (11) | 0.0017 (9) | 0.0000 (9) | −0.0011 (8) |
C14 | 0.0327 (11) | 0.0336 (13) | 0.0351 (11) | −0.0032 (9) | −0.0045 (9) | −0.0002 (9) |
C15 | 0.0304 (10) | 0.0327 (12) | 0.0326 (10) | 0.0062 (9) | −0.0012 (8) | 0.0005 (9) |
C16 | 0.0317 (10) | 0.0230 (11) | 0.0254 (9) | 0.0036 (8) | 0.0064 (8) | 0.0031 (8) |
O16 | 0.0390 (8) | 0.0237 (8) | 0.0351 (8) | 0.0051 (6) | 0.0001 (6) | −0.0018 (6) |
N1—C2 | 1.338 (2) | C7—N8 | 1.352 (2) |
N1—N8 | 1.358 (2) | C7—H7 | 0.9500 |
C2—C3 | 1.397 (3) | C9—O9 | 1.241 (2) |
C2—C21 | 1.493 (3) | C9—C11 | 1.474 (3) |
C21—H21A | 0.9800 | C11—C12 | 1.404 (3) |
C21—H21B | 0.9800 | C11—C16 | 1.415 (3) |
C21—H21C | 0.9800 | C12—C13 | 1.384 (3) |
C3—C3a | 1.372 (3) | C12—H12 | 0.9500 |
C3—H3 | 0.9500 | C13—C14 | 1.392 (3) |
C3a—N4 | 1.363 (2) | C13—H13 | 0.9500 |
C3a—N8 | 1.400 (2) | C14—C15 | 1.374 (3) |
N4—C5 | 1.310 (2) | C14—H14 | 0.9500 |
C5—C6 | 1.425 (3) | C15—C16 | 1.388 (3) |
C5—H5 | 0.9500 | C15—H15 | 0.9500 |
C6—C7 | 1.368 (3) | C16—O16 | 1.349 (2) |
C6—C9 | 1.482 (3) | O16—H16 | 0.9483 |
C2—N1—N8 | 103.94 (15) | C7—N8—N1 | 125.23 (16) |
N1—C2—C3 | 112.89 (18) | C7—N8—C3a | 122.75 (17) |
N1—C2—C21 | 119.54 (18) | N1—N8—C3a | 112.02 (15) |
C3—C2—C21 | 127.55 (18) | O9—C9—C11 | 120.27 (17) |
C2—C21—H21A | 109.5 | O9—C9—C6 | 117.32 (17) |
C2—C21—H21B | 109.5 | C11—C9—C6 | 122.38 (18) |
H21A—C21—H21B | 109.5 | C12—C11—C16 | 118.18 (17) |
C2—C21—H21C | 109.5 | C12—C11—C9 | 123.04 (17) |
H21A—C21—H21C | 109.5 | C16—C11—C9 | 118.79 (18) |
H21B—C21—H21C | 109.5 | C13—C12—C11 | 121.05 (18) |
C3a—C3—C2 | 105.50 (17) | C13—C12—H12 | 119.5 |
C3a—C3—H3 | 127.2 | C11—C12—H12 | 119.5 |
C2—C3—H3 | 127.2 | C12—C13—C14 | 119.14 (19) |
N4—C3a—C3 | 133.71 (18) | C12—C13—H13 | 120.4 |
N4—C3a—N8 | 120.65 (16) | C14—C13—H13 | 120.4 |
C3—C3a—N8 | 105.64 (18) | C15—C14—C13 | 121.36 (18) |
C5—N4—C3a | 116.29 (16) | C15—C14—H14 | 119.3 |
N4—C5—C6 | 125.0 (2) | C13—C14—H14 | 119.3 |
N4—C5—H5 | 117.5 | C14—C15—C16 | 119.74 (18) |
C6—C5—H5 | 117.5 | C14—C15—H15 | 120.1 |
C7—C6—C5 | 118.14 (17) | C16—C15—H15 | 120.1 |
C7—C6—C9 | 124.04 (16) | O16—C16—C15 | 117.22 (16) |
C5—C6—C9 | 117.41 (18) | O16—C16—C11 | 122.36 (16) |
N8—C7—C6 | 117.13 (17) | C15—C16—C11 | 120.38 (18) |
N8—C7—H7 | 121.4 | C16—O16—H16 | 109.2 |
C6—C7—H7 | 121.4 | ||
N8—N1—C2—C3 | −0.4 (2) | C3—C3a—N8—N1 | −0.3 (2) |
N8—N1—C2—C21 | 178.08 (16) | C7—C6—C9—O9 | −145.85 (19) |
N1—C2—C3—C3a | 0.3 (2) | C5—C6—C9—O9 | 26.7 (2) |
C21—C2—C3—C3a | −178.08 (18) | C7—C6—C9—C11 | 32.3 (3) |
C2—C3—C3a—N4 | 179.8 (2) | C5—C6—C9—C11 | −155.16 (17) |
C2—C3—C3a—N8 | 0.0 (2) | O9—C9—C11—C12 | −163.23 (18) |
C3—C3a—N4—C5 | 179.25 (19) | C6—C9—C11—C12 | 18.6 (3) |
N8—C3a—N4—C5 | −0.9 (2) | O9—C9—C11—C16 | 17.2 (3) |
C3a—N4—C5—C6 | 1.6 (3) | C6—C9—C11—C16 | −160.87 (17) |
N4—C5—C6—C7 | −1.9 (3) | C16—C11—C12—C13 | 3.3 (3) |
N4—C5—C6—C9 | −174.82 (17) | C9—C11—C12—C13 | −176.18 (17) |
C5—C6—C7—N8 | 1.3 (3) | C11—C12—C13—C14 | −0.1 (3) |
C9—C6—C7—N8 | 173.76 (16) | C12—C13—C14—C15 | −2.0 (3) |
C6—C7—N8—N1 | −179.99 (16) | C13—C14—C15—C16 | 0.7 (3) |
C6—C7—N8—C3a | −0.7 (3) | C14—C15—C16—O16 | −179.77 (17) |
C2—N1—N8—C7 | 179.72 (16) | C14—C15—C16—C11 | 2.6 (3) |
C2—N1—N8—C3a | 0.41 (19) | C12—C11—C16—O16 | 177.91 (16) |
N4—C3a—N8—C7 | 0.5 (3) | C9—C11—C16—O16 | −2.5 (3) |
C3—C3a—N8—C7 | −179.59 (16) | C12—C11—C16—C15 | −4.6 (3) |
N4—C3a—N8—N1 | 179.88 (16) | C9—C11—C16—C15 | 174.95 (16) |
D—H···A | D—H | H···A | D···A | D—H···A |
O16—H16···O9 | 0.95 | 1.74 | 2.562 (2) | 144 |
C3—H3···N4i | 0.95 | 2.61 | 3.528 (2) | 162 |
C15—H15···N1ii | 0.95 | 2.39 | 3.337 (3) | 172 |
Symmetry codes: (i) −x−1, −y, −z+1; (ii) −x+3/2, y−1/2, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | C14H11N3O2 |
Mr | 253.26 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 150 |
a, b, c (Å) | 5.6004 (2), 11.8172 (5), 17.865 (7) |
β (°) | 98.71 (16) |
V (Å3) | 1168.67 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.20 × 0.15 × 0.08 |
Data collection | |
Diffractometer | Nonius KAPPA CCD diffractometer |
Absorption correction | Multi-scan (SORTAV; Blessing, 1995, 1997) |
Tmin, Tmax | 0.980, 0.993 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8919, 2591, 1681 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.052, 0.144, 1.01 |
No. of reflections | 2591 |
No. of parameters | 173 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.21, −0.29 |
Computer programs: Kappa-CCD Server Software (Nonius, 1997), DENZO (Otwinowski & Minor, 1997), DENZO, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), PLATON (Spek, 2000), SHELXL97 and PRPKAPPA (Ferguson, 1999).
N1—C2 | 1.338 (2) | N4—C5 | 1.310 (2) |
N1—N8 | 1.358 (2) | C9—O9 | 1.241 (2) |
C3a—N4 | 1.363 (2) | C16—O16 | 1.349 (2) |
C3a—N8 | 1.400 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
O16—H16···O9 | 0.95 | 1.74 | 2.562 (2) | 143.6 |
C3—H3···N4i | 0.95 | 2.61 | 3.528 (2) | 161.6 |
C15—H15···N1ii | 0.95 | 2.39 | 3.337 (3) | 172.3 |
Symmetry codes: (i) −x−1, −y, −z+1; (ii) −x+3/2, y−1/2, −z+3/2. |
The investigation of the structure of the title compound, (IV), continues our research into the reactions of 3-aminopyrazoles as intermediates in the preparation of fused pyrazole systems with the potential for diverse medical and biological applications. Reactions between such compounds and α- and β-unsaturated carbonyl derivatives were carried out by Earl et al. (1975) and Shaw & Hildick (1971). Pyrazolo[1,5-a]pyrimidines are very interesting due to their biological activities, which include antileukaemia, antitumour (Quiroga et al., 1998, 1999), antipyretic (Auzzi et al., 1979, and references therein) and antiparasitic properties (Senga et al., 1975). The title compound, (IV), results from the reaction of 3-amino-5-methylpyrazole, (I), with 4-oxo-4H-chromene-3-carbaldehyde, (II), in which condensation takes place between the amino group in the pyrazole ring and the aldehyde in the chromene, in conjunction with nucleophilic displacement of oxygen in the chromene ring by the attack of N2 in the pyrazole ring on C2 in the chromene (see scheme). \sch
Compound (IV) can be divided into two isolated moieties: the pyrazolopyrimidine ring and the 2-hydroxyphenylcarbonyl residue. The bond lengths associated with the pyrazolo[1,5-a]pyrimidine ring confirm the configuration depicted in the scheme. The N8—C3a bond [1.400 (2) Å] is a typical single bond between two trigonal atoms (typical Ntrigonal—Ctrigonal 1.40 Å; ref?), because there is no delocalization associated with these atoms. This ring and its substituents are planar within experimental error.
The other moiety of the structure, the 2-hydroxyphenylcarbonyl attached to C6 of the pyrazolopyrimidine ring, is also planar, with a strong intramolecular hydrogen bond in which the hydroxyl atom O16 acts as a donor to the carbonyl O9, giving an S(6) primary motif. The phenolic ring is not constrained by this bond to lie in the same plane as the keto group and its connected atoms, as shown by the O9—C9—C11—C16 torsion angle of 17.2 (3)°. This intramolecular bond between the carbonyl and the hydroxy groups confirms the existence of the quinone-hydroxy tautomeric form. The angle between the mean planes of the two rings is 42.53°. Selected bond lengths are given in Table 1.
Each pair of molecules of (IV) related by (−1 − x, −y, 1 − z) is linked to form a dimer by means of C—H···N bonds; atom C3 acts as a donor to atom N4 at (−1 − x, −y, 1 − z), with a D···A distance of 3.528 (2) Å. The action of the centre of symmetry at (−1/2, 0, 1/2) repeats this bond, forming an R22(8) ring (Fig. 2). In addition, atom C15 acts as a donor to atom N1 at (3/2 − x, −1/2 + y, 3/2 − z), with a D···A distance of 3.337 (3) Å. This forms a spiral chain around the screw-axis at (3/4, y, 3/4), which in turn forms a C(7) infinite chain along [010]. Query rephrasing. Both these sets of interactions combine to form a complex three-dimensional continuum of further chains. Full details of the hydrogen bonding are given in Table 2.
Examination of the structure with PLATON (Spek, 2000) showed that there were no solvent-accessible voids in the crystal lattice.