Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807049744/gk2110sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807049744/gk2110Isup2.hkl |
CCDC reference: 667167
Key indicators
- Single-crystal X-ray study
- T = 295 K
- Mean (C-C) = 0.006 Å
- R factor = 0.049
- wR factor = 0.157
- Data-to-parameter ratio = 14.8
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT154_ALERT_1_C The su's on the Cell Angles are Equal (x 10000) 3000 Deg. PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for O4 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for N3 PLAT720_ALERT_4_C Number of Unusual/Non-Standard Label(s) ........ 2
Alert level G PLAT794_ALERT_5_G Check Predicted Bond Valency for Cu1 (2) 2.13 PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 3
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 4 ALERT level C = Check and explain 2 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 2 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check
For literature on copper 4-formylbenzoate complexes, see: Deng et al. (2006).
Copper(II) nitrate hexahydrate (1.48 g, 5 mmol) was added to a H2O/EtOH solution (1:1 v/v) of 4-formylbenzoic acid (1.5 g, 10 mmol) and 1,10-phenanthroline (0.99 g 5 mmol). Sodium hydroxide (0.1 M) was added dropwise until pH = 5 was reached. Blue single crystals separated from the filtered solution after several days. CH&N analysis. Calc. for C20H15N3O7Cu: C 50.80, H 3.20, N 8.89. Found: C 50.85, H 3.24, N 8.82.
Carbon-bound H atoms were placed in calculated positions, with C—H = 0.93 and Uiso(H) = 1.2Ueq (C), and were included in the refinement in the riding model approximation. The H atoms of water molecules were located in difference Fourier maps and refined with the O—H and H···H distance restraints to 0.85 (1) and 1.39 (1) Å, and with Uiso(H) = 1.5Ueq(O).
In our previous work, we have reported the synthesis and structure of complex [Cu(C8H5O3)2(H2O)2].2H2O, (I) (Deng et al., 2006), which can be obtained by the reaction of Cu(X)2 (X = Ac, NO3, Cl) and 4-formylbenzoic acid in a aqueous solution. We have noticed that in the presence of 4-formylbenzoic acid the anion X was not coordinating to the copper(II) atom. But for the title complex, we introduced the 1,10-phenanthroline ligand to the system of Cu(NO3)2 and 4-formylbenzoic acid in a H2O/EtOH solution, and obtained a new complex [Cu(NO3)(C8H5O3)(C12H8N2)(H2O)], (II), in which the copper(II) atom is five-coordinated by nitrate group and formylbenzoate carboxylate group in monodentate mode, 1.10-phenanthroline ligand in chelating mode as well as a water molecule (Fig.1). Adjacent complex molecules are linked into a one-dimensional chain structure via hydrogen-bonding interactions and π-π stacking interactions between the benzene rings of phenanthroline and 4-formylbenzoato ligand, with centroid-centroid distances of 3.634 (3) (Cg1 and Cg2) and 3.722 (3) Å (Cg2 and Cg3) [Cg1: C15i—C18i/N2i/C19i; Cg2: C2ii—C7ii; Cg3: C12—C15/C19—C20, symmetry code: (I) x - 1,y,z; (II) -x + 1,-y + 1,-z + 1; Fig.2].
For literature on copper 4-formylbenzoate complexes, see: Deng et al. (2006).
Data collection: RAPID-AUTO (Rigaku Corporation, 1998); cell refinement: RAPID-AUTO (Rigaku Corporation, 1998); data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPII (Johnson, 1976); software used to prepare material for publication: SHELXL97 (Sheldrick, 1997).
[Cu(C8H5O3)(NO3)(C12H8N2)(H2O)] | Z = 2 |
Mr = 472.89 | F(000) = 482 |
Triclinic, P1 | Dx = 1.670 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.6070 (15) Å | Cell parameters from 4431 reflections |
b = 9.0859 (18) Å | θ = 3.5–27.4° |
c = 14.147 (3) Å | µ = 1.21 mm−1 |
α = 88.88 (3)° | T = 295 K |
β = 74.49 (3)° | Prism, blue |
γ = 86.60 (3)° | 0.32 × 0.25 × 0.18 mm |
V = 940.5 (4) Å3 |
Rigaku R-AXIS RAPID diffractometer | 4247 independent reflections |
Radiation source: fine-focus sealed tube | 2405 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.048 |
Detector resolution: 10.000 pixels mm-1 | θmax = 27.4°, θmin = 3.5° |
ω scans | h = −9→7 |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | k = −11→11 |
Tmin = 0.699, Tmax = 0.807 | l = −18→18 |
9201 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.157 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0732P)2] where P = (Fo2 + 2Fc2)/3 |
4247 reflections | (Δ/σ)max < 0.001 |
286 parameters | Δρmax = 0.67 e Å−3 |
3 restraints | Δρmin = −0.68 e Å−3 |
[Cu(C8H5O3)(NO3)(C12H8N2)(H2O)] | γ = 86.60 (3)° |
Mr = 472.89 | V = 940.5 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.6070 (15) Å | Mo Kα radiation |
b = 9.0859 (18) Å | µ = 1.21 mm−1 |
c = 14.147 (3) Å | T = 295 K |
α = 88.88 (3)° | 0.32 × 0.25 × 0.18 mm |
β = 74.49 (3)° |
Rigaku R-AXIS RAPID diffractometer | 4247 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 2405 reflections with I > 2σ(I) |
Tmin = 0.699, Tmax = 0.807 | Rint = 0.048 |
9201 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | 3 restraints |
wR(F2) = 0.157 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | Δρmax = 0.67 e Å−3 |
4247 reflections | Δρmin = −0.68 e Å−3 |
286 parameters |
x | y | z | Uiso*/Ueq | ||
Cu1 | 0.54659 (7) | 0.45156 (5) | 0.68949 (4) | 0.0463 (2) | |
O1W | 0.3833 (4) | 0.2877 (3) | 0.7229 (2) | 0.0532 (7) | |
H1W1 | 0.411 (5) | 0.242 (5) | 0.6689 (19) | 0.080* | |
H1W2 | 0.2684 (17) | 0.300 (5) | 0.745 (3) | 0.080* | |
O1 | 0.6488 (4) | 0.3948 (3) | 0.5529 (2) | 0.0536 (7) | |
O2 | 0.5177 (5) | 0.1807 (4) | 0.5543 (3) | 0.0758 (10) | |
O3 | 1.1474 (6) | 0.2219 (5) | 0.0636 (3) | 0.0959 (13) | |
O4 | 0.7526 (4) | 0.3261 (4) | 0.7633 (2) | 0.0685 (10) | |
O5 | 0.9981 (5) | 0.2915 (5) | 0.6474 (3) | 0.0885 (12) | |
O6 | 1.0143 (4) | 0.3075 (4) | 0.7949 (2) | 0.0653 (9) | |
N1 | 0.4366 (4) | 0.5431 (4) | 0.8214 (2) | 0.0470 (8) | |
N2 | 0.6552 (4) | 0.6481 (4) | 0.6598 (2) | 0.0429 (8) | |
N3 | 0.9214 (5) | 0.3087 (4) | 0.7339 (3) | 0.0462 (8) | |
C1 | 0.6249 (6) | 0.2757 (4) | 0.5128 (3) | 0.0484 (10) | |
C2 | 0.7352 (5) | 0.2457 (4) | 0.4095 (3) | 0.0461 (10) | |
C3 | 0.8376 (6) | 0.3544 (5) | 0.3519 (3) | 0.0489 (10) | |
H3 | 0.8364 | 0.4483 | 0.3771 | 0.059* | |
C4 | 0.9389 (6) | 0.3223 (5) | 0.2587 (3) | 0.0527 (11) | |
H4 | 1.0070 | 0.3947 | 0.2209 | 0.063* | |
C5 | 0.9418 (6) | 0.1814 (5) | 0.2190 (3) | 0.0514 (10) | |
C6 | 0.8392 (6) | 0.0743 (5) | 0.2771 (3) | 0.0537 (11) | |
H6 | 0.8400 | −0.0197 | 0.2520 | 0.064* | |
C7 | 0.7369 (6) | 0.1062 (4) | 0.3709 (3) | 0.0512 (10) | |
H7 | 0.6685 | 0.0341 | 0.4088 | 0.061* | |
C8 | 1.0505 (7) | 0.1427 (6) | 0.1195 (4) | 0.0686 (14) | |
H8 | 1.0431 | 0.0476 | 0.0982 | 0.082* | |
C9 | 0.3303 (6) | 0.4855 (5) | 0.9034 (3) | 0.0581 (12) | |
H9 | 0.3038 | 0.3869 | 0.9036 | 0.070* | |
C10 | 0.2590 (7) | 0.5672 (6) | 0.9875 (3) | 0.0668 (13) | |
H10 | 0.1885 | 0.5226 | 1.0434 | 0.080* | |
C11 | 0.2912 (7) | 0.7120 (6) | 0.9890 (3) | 0.0641 (13) | |
H11 | 0.2408 | 0.7670 | 1.0455 | 0.077* | |
C12 | 0.4011 (6) | 0.7796 (5) | 0.9049 (3) | 0.0507 (11) | |
C13 | 0.4415 (6) | 0.9304 (5) | 0.8971 (4) | 0.0589 (12) | |
H13 | 0.3901 | 0.9930 | 0.9496 | 0.071* | |
C14 | 0.5541 (6) | 0.9851 (5) | 0.8140 (4) | 0.0574 (12) | |
H14 | 0.5790 | 1.0844 | 0.8110 | 0.069* | |
C15 | 0.6352 (6) | 0.8924 (5) | 0.7309 (3) | 0.0487 (10) | |
C16 | 0.7539 (6) | 0.9401 (5) | 0.6428 (3) | 0.0553 (11) | |
H16 | 0.7877 | 1.0373 | 0.6359 | 0.066* | |
C17 | 0.8188 (6) | 0.8433 (5) | 0.5681 (3) | 0.0576 (11) | |
H17 | 0.8985 | 0.8737 | 0.5100 | 0.069* | |
C18 | 0.7654 (6) | 0.6971 (5) | 0.5787 (3) | 0.0529 (11) | |
H18 | 0.8096 | 0.6327 | 0.5263 | 0.063* | |
C19 | 0.5920 (5) | 0.7451 (4) | 0.7358 (3) | 0.0440 (9) | |
C20 | 0.4725 (5) | 0.6878 (4) | 0.8236 (3) | 0.0449 (9) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.0447 (3) | 0.0530 (3) | 0.0389 (3) | −0.0098 (2) | −0.0057 (2) | −0.0038 (2) |
O1W | 0.0412 (16) | 0.0584 (18) | 0.055 (2) | −0.0149 (13) | −0.0018 (14) | −0.0017 (14) |
O1 | 0.0620 (19) | 0.0583 (17) | 0.0393 (17) | −0.0189 (14) | −0.0075 (14) | −0.0080 (13) |
O2 | 0.078 (2) | 0.065 (2) | 0.070 (2) | −0.0312 (17) | 0.0103 (19) | −0.0187 (17) |
O3 | 0.101 (3) | 0.104 (3) | 0.065 (3) | 0.008 (2) | 0.005 (2) | 0.003 (2) |
O4 | 0.0388 (18) | 0.103 (3) | 0.059 (2) | 0.0005 (16) | −0.0078 (16) | 0.0154 (18) |
O5 | 0.075 (3) | 0.137 (3) | 0.043 (2) | −0.007 (2) | 0.0047 (19) | −0.018 (2) |
O6 | 0.0442 (18) | 0.099 (2) | 0.051 (2) | −0.0018 (16) | −0.0079 (16) | −0.0120 (17) |
N1 | 0.0404 (19) | 0.055 (2) | 0.043 (2) | −0.0061 (15) | −0.0053 (16) | −0.0023 (16) |
N2 | 0.0417 (19) | 0.0525 (19) | 0.0313 (18) | −0.0106 (14) | −0.0024 (15) | −0.0031 (14) |
N3 | 0.042 (2) | 0.0527 (19) | 0.040 (2) | −0.0091 (15) | −0.0017 (17) | −0.0012 (15) |
C1 | 0.052 (3) | 0.048 (2) | 0.046 (3) | −0.0050 (18) | −0.014 (2) | −0.0095 (19) |
C2 | 0.042 (2) | 0.056 (2) | 0.042 (2) | −0.0051 (18) | −0.0116 (19) | −0.0055 (19) |
C3 | 0.055 (3) | 0.050 (2) | 0.042 (3) | −0.0082 (19) | −0.012 (2) | −0.0044 (18) |
C4 | 0.058 (3) | 0.050 (2) | 0.049 (3) | −0.0087 (19) | −0.012 (2) | −0.001 (2) |
C5 | 0.050 (3) | 0.057 (2) | 0.047 (3) | −0.0014 (19) | −0.014 (2) | −0.006 (2) |
C6 | 0.056 (3) | 0.055 (2) | 0.050 (3) | −0.004 (2) | −0.012 (2) | −0.015 (2) |
C7 | 0.051 (3) | 0.049 (2) | 0.055 (3) | −0.0085 (18) | −0.014 (2) | −0.009 (2) |
C8 | 0.063 (3) | 0.084 (4) | 0.053 (3) | 0.001 (3) | −0.007 (3) | 0.001 (3) |
C9 | 0.057 (3) | 0.071 (3) | 0.042 (3) | −0.010 (2) | −0.003 (2) | 0.004 (2) |
C10 | 0.066 (3) | 0.083 (4) | 0.039 (3) | −0.010 (3) | 0.008 (2) | 0.001 (2) |
C11 | 0.059 (3) | 0.085 (4) | 0.041 (3) | 0.003 (2) | −0.001 (2) | −0.019 (2) |
C12 | 0.050 (3) | 0.066 (3) | 0.036 (2) | 0.005 (2) | −0.011 (2) | −0.013 (2) |
C13 | 0.066 (3) | 0.061 (3) | 0.053 (3) | 0.006 (2) | −0.021 (2) | −0.020 (2) |
C14 | 0.063 (3) | 0.054 (2) | 0.062 (3) | 0.000 (2) | −0.028 (3) | −0.012 (2) |
C15 | 0.048 (3) | 0.055 (2) | 0.047 (3) | −0.0047 (19) | −0.020 (2) | −0.005 (2) |
C16 | 0.063 (3) | 0.054 (2) | 0.052 (3) | −0.019 (2) | −0.018 (2) | 0.003 (2) |
C17 | 0.064 (3) | 0.066 (3) | 0.043 (3) | −0.020 (2) | −0.011 (2) | −0.002 (2) |
C18 | 0.051 (3) | 0.070 (3) | 0.036 (2) | −0.018 (2) | −0.004 (2) | −0.004 (2) |
C19 | 0.042 (2) | 0.056 (2) | 0.035 (2) | −0.0035 (17) | −0.0119 (18) | −0.0058 (18) |
C20 | 0.041 (2) | 0.052 (2) | 0.042 (2) | 0.0027 (18) | −0.0132 (19) | −0.0045 (19) |
Cu1—O1 | 1.947 (3) | C5—C8 | 1.467 (6) |
Cu1—O1W | 1.965 (3) | C6—C7 | 1.374 (6) |
Cu1—N2 | 2.002 (3) | C6—H6 | 0.9300 |
Cu1—N1 | 2.004 (3) | C7—H7 | 0.9300 |
Cu1—O4 | 2.337 (3) | C8—H8 | 0.9300 |
O1W—H1W1 | 0.85 (3) | C9—C10 | 1.379 (7) |
O1W—H1W2 | 0.85 (3) | C9—H9 | 0.9300 |
O1—C1 | 1.276 (5) | C10—C11 | 1.354 (7) |
O2—C1 | 1.250 (5) | C10—H10 | 0.9300 |
O3—C8 | 1.190 (6) | C11—C12 | 1.411 (6) |
O4—N3 | 1.241 (4) | C11—H11 | 0.9300 |
O5—N3 | 1.215 (4) | C12—C20 | 1.401 (6) |
O6—N3 | 1.252 (4) | C12—C13 | 1.418 (6) |
N1—C9 | 1.341 (5) | C13—C14 | 1.360 (7) |
N1—C20 | 1.362 (5) | C13—H13 | 0.9300 |
N2—C18 | 1.314 (5) | C14—C15 | 1.436 (6) |
N2—C19 | 1.370 (5) | C14—H14 | 0.9300 |
C1—C2 | 1.499 (6) | C15—C19 | 1.392 (6) |
C2—C7 | 1.388 (6) | C15—C16 | 1.407 (6) |
C2—C3 | 1.403 (6) | C16—C17 | 1.357 (6) |
C3—C4 | 1.365 (6) | C16—H16 | 0.9300 |
C3—H3 | 0.9300 | C17—C18 | 1.406 (6) |
C4—C5 | 1.405 (6) | C17—H17 | 0.9300 |
C4—H4 | 0.9300 | C18—H18 | 0.9300 |
C5—C6 | 1.396 (6) | C19—C20 | 1.438 (6) |
O1—Cu1—O1W | 95.24 (13) | C6—C7—C2 | 120.3 (4) |
O1—Cu1—N2 | 89.81 (13) | C6—C7—H7 | 119.9 |
O1W—Cu1—N2 | 165.89 (13) | C2—C7—H7 | 119.9 |
O1—Cu1—N1 | 170.66 (12) | O3—C8—C5 | 125.9 (5) |
O1W—Cu1—N1 | 91.10 (13) | O3—C8—H8 | 117.1 |
N2—Cu1—N1 | 82.47 (13) | C5—C8—H8 | 117.1 |
O1—Cu1—O4 | 101.06 (13) | N1—C9—C10 | 122.4 (5) |
O1W—Cu1—O4 | 90.02 (12) | N1—C9—H9 | 118.8 |
N2—Cu1—O4 | 101.96 (13) | C10—C9—H9 | 118.8 |
N1—Cu1—O4 | 85.75 (13) | C11—C10—C9 | 120.4 (5) |
Cu1—O1W—H1W1 | 101 (3) | C11—C10—H10 | 119.8 |
Cu1—O1W—H1W2 | 123 (3) | C9—C10—H10 | 119.8 |
H1W1—O1W—H1W2 | 111 (4) | C10—C11—C12 | 120.1 (4) |
C1—O1—Cu1 | 126.9 (3) | C10—C11—H11 | 120.0 |
N3—O4—Cu1 | 129.6 (3) | C12—C11—H11 | 120.0 |
C9—N1—C20 | 117.3 (4) | C20—C12—C11 | 115.9 (4) |
C9—N1—Cu1 | 130.1 (3) | C20—C12—C13 | 118.9 (4) |
C20—N1—Cu1 | 112.6 (3) | C11—C12—C13 | 125.2 (4) |
C18—N2—C19 | 117.6 (4) | C14—C13—C12 | 121.2 (4) |
C18—N2—Cu1 | 129.9 (3) | C14—C13—H13 | 119.4 |
C19—N2—Cu1 | 112.3 (3) | C12—C13—H13 | 119.4 |
O5—N3—O4 | 121.4 (4) | C13—C14—C15 | 121.1 (4) |
O5—N3—O6 | 119.4 (4) | C13—C14—H14 | 119.4 |
O4—N3—O6 | 119.2 (4) | C15—C14—H14 | 119.4 |
O2—C1—O1 | 124.5 (4) | C19—C15—C16 | 116.8 (4) |
O2—C1—C2 | 117.5 (4) | C19—C15—C14 | 118.6 (4) |
O1—C1—C2 | 118.0 (4) | C16—C15—C14 | 124.6 (4) |
C7—C2—C3 | 119.6 (4) | C17—C16—C15 | 119.5 (4) |
C7—C2—C1 | 118.8 (4) | C17—C16—H16 | 120.3 |
C3—C2—C1 | 121.6 (4) | C15—C16—H16 | 120.3 |
C4—C3—C2 | 119.9 (4) | C16—C17—C18 | 120.0 (4) |
C4—C3—H3 | 120.0 | C16—C17—H17 | 120.0 |
C2—C3—H3 | 120.0 | C18—C17—H17 | 120.0 |
C3—C4—C5 | 120.9 (4) | N2—C18—C17 | 122.4 (4) |
C3—C4—H4 | 119.5 | N2—C18—H18 | 118.8 |
C5—C4—H4 | 119.5 | C17—C18—H18 | 118.8 |
C6—C5—C4 | 118.5 (4) | N2—C19—C15 | 123.7 (4) |
C6—C5—C8 | 119.1 (4) | N2—C19—C20 | 116.2 (4) |
C4—C5—C8 | 122.4 (4) | C15—C19—C20 | 120.1 (4) |
C7—C6—C5 | 120.7 (4) | N1—C20—C12 | 123.9 (4) |
C7—C6—H6 | 119.6 | N1—C20—C19 | 116.0 (4) |
C5—C6—H6 | 119.6 | C12—C20—C19 | 120.1 (4) |
O1W—Cu1—O1—C1 | −8.8 (4) | C6—C5—C8—O3 | −177.9 (5) |
N2—Cu1—O1—C1 | −175.6 (4) | C4—C5—C8—O3 | 1.3 (8) |
O4—Cu1—O1—C1 | 82.3 (4) | C20—N1—C9—C10 | −0.1 (6) |
O1—Cu1—O4—N3 | 40.4 (4) | Cu1—N1—C9—C10 | −177.0 (3) |
O1W—Cu1—O4—N3 | 135.8 (4) | N1—C9—C10—C11 | 1.6 (8) |
N2—Cu1—O4—N3 | −51.8 (4) | C9—C10—C11—C12 | −1.2 (8) |
N1—Cu1—O4—N3 | −133.1 (4) | C10—C11—C12—C20 | −0.6 (7) |
O1W—Cu1—N1—C9 | 15.0 (4) | C10—C11—C12—C13 | 178.8 (4) |
N2—Cu1—N1—C9 | −177.6 (4) | C20—C12—C13—C14 | −2.9 (6) |
O4—Cu1—N1—C9 | −74.9 (4) | C11—C12—C13—C14 | 177.7 (4) |
O1W—Cu1—N1—C20 | −162.0 (3) | C12—C13—C14—C15 | 0.4 (7) |
N2—Cu1—N1—C20 | 5.4 (3) | C13—C14—C15—C19 | 1.8 (6) |
O4—Cu1—N1—C20 | 108.1 (3) | C13—C14—C15—C16 | −179.5 (4) |
O1—Cu1—N2—C18 | −6.0 (4) | C19—C15—C16—C17 | 0.4 (6) |
O1W—Cu1—N2—C18 | −117.2 (6) | C14—C15—C16—C17 | −178.3 (4) |
N1—Cu1—N2—C18 | 179.3 (4) | C15—C16—C17—C18 | 0.8 (7) |
O4—Cu1—N2—C18 | 95.3 (4) | C19—N2—C18—C17 | 0.0 (6) |
O1—Cu1—N2—C19 | 169.6 (3) | Cu1—N2—C18—C17 | 175.3 (3) |
O1W—Cu1—N2—C19 | 58.4 (6) | C16—C17—C18—N2 | −1.0 (7) |
N1—Cu1—N2—C19 | −5.2 (3) | C18—N2—C19—C15 | 1.3 (6) |
O4—Cu1—N2—C19 | −89.2 (3) | Cu1—N2—C19—C15 | −174.8 (3) |
Cu1—O4—N3—O5 | −36.2 (6) | C18—N2—C19—C20 | −179.7 (4) |
Cu1—O4—N3—O6 | 144.4 (3) | Cu1—N2—C19—C20 | 4.1 (4) |
Cu1—O1—C1—O2 | 6.3 (7) | C16—C15—C19—N2 | −1.5 (6) |
Cu1—O1—C1—C2 | −172.4 (2) | C14—C15—C19—N2 | 177.3 (4) |
O2—C1—C2—C7 | −10.6 (6) | C16—C15—C19—C20 | 179.6 (4) |
O1—C1—C2—C7 | 168.3 (4) | C14—C15—C19—C20 | −1.6 (6) |
O2—C1—C2—C3 | 170.1 (4) | C9—N1—C20—C12 | −1.9 (6) |
O1—C1—C2—C3 | −11.1 (6) | Cu1—N1—C20—C12 | 175.5 (3) |
C7—C2—C3—C4 | −0.5 (6) | C9—N1—C20—C19 | 177.8 (4) |
C1—C2—C3—C4 | 178.9 (4) | Cu1—N1—C20—C19 | −4.8 (4) |
C2—C3—C4—C5 | 0.3 (6) | C11—C12—C20—N1 | 2.2 (6) |
C3—C4—C5—C6 | −0.2 (7) | C13—C12—C20—N1 | −177.2 (4) |
C3—C4—C5—C8 | −179.4 (4) | C11—C12—C20—C19 | −177.5 (4) |
C4—C5—C6—C7 | 0.3 (6) | C13—C12—C20—C19 | 3.1 (6) |
C8—C5—C6—C7 | 179.5 (4) | N2—C19—C20—N1 | 0.4 (5) |
C5—C6—C7—C2 | −0.4 (6) | C15—C19—C20—N1 | 179.4 (3) |
C3—C2—C7—C6 | 0.5 (6) | N2—C19—C20—C12 | −179.8 (3) |
C1—C2—C7—C6 | −178.9 (4) | C15—C19—C20—C12 | −0.9 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1W1···O2 | 0.85 (3) | 1.70 (2) | 2.520 (5) | 164 (5) |
O1W—H1W2···O6i | 0.85 (3) | 1.87 (1) | 2.714 (4) | 175 (5) |
Symmetry code: (i) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | [Cu(C8H5O3)(NO3)(C12H8N2)(H2O)] |
Mr | 472.89 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 295 |
a, b, c (Å) | 7.6070 (15), 9.0859 (18), 14.147 (3) |
α, β, γ (°) | 88.88 (3), 74.49 (3), 86.60 (3) |
V (Å3) | 940.5 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.21 |
Crystal size (mm) | 0.32 × 0.25 × 0.18 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPID |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.699, 0.807 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9201, 4247, 2405 |
Rint | 0.048 |
(sin θ/λ)max (Å−1) | 0.648 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.157, 1.09 |
No. of reflections | 4247 |
No. of parameters | 286 |
No. of restraints | 3 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.67, −0.68 |
Computer programs: RAPID-AUTO (Rigaku Corporation, 1998), CrystalStructure (Rigaku/MSC, 2002), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEPII (Johnson, 1976).
Cu1—O1 | 1.947 (3) | Cu1—N1 | 2.004 (3) |
Cu1—O1W | 1.965 (3) | Cu1—O4 | 2.337 (3) |
Cu1—N2 | 2.002 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1W1···O2 | 0.85 (3) | 1.696 (15) | 2.520 (5) | 164 (5) |
O1W—H1W2···O6i | 0.85 (3) | 1.870 (12) | 2.714 (4) | 175 (5) |
Symmetry code: (i) x−1, y, z. |
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In our previous work, we have reported the synthesis and structure of complex [Cu(C8H5O3)2(H2O)2].2H2O, (I) (Deng et al., 2006), which can be obtained by the reaction of Cu(X)2 (X = Ac, NO3, Cl) and 4-formylbenzoic acid in a aqueous solution. We have noticed that in the presence of 4-formylbenzoic acid the anion X was not coordinating to the copper(II) atom. But for the title complex, we introduced the 1,10-phenanthroline ligand to the system of Cu(NO3)2 and 4-formylbenzoic acid in a H2O/EtOH solution, and obtained a new complex [Cu(NO3)(C8H5O3)(C12H8N2)(H2O)], (II), in which the copper(II) atom is five-coordinated by nitrate group and formylbenzoate carboxylate group in monodentate mode, 1.10-phenanthroline ligand in chelating mode as well as a water molecule (Fig.1). Adjacent complex molecules are linked into a one-dimensional chain structure via hydrogen-bonding interactions and π-π stacking interactions between the benzene rings of phenanthroline and 4-formylbenzoato ligand, with centroid-centroid distances of 3.634 (3) (Cg1 and Cg2) and 3.722 (3) Å (Cg2 and Cg3) [Cg1: C15i—C18i/N2i/C19i; Cg2: C2ii—C7ii; Cg3: C12—C15/C19—C20, symmetry code: (I) x - 1,y,z; (II) -x + 1,-y + 1,-z + 1; Fig.2].