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Three different hydrates of risedronate were obtained by varying the pH of a solution containing the compound. At the pH values used, the N atom of the pyridine group is protonated and the compounds are zwitterionic. Crystals obtained directly from the synthesis resulted in risedronate monohydrate, or [1-hydroxy-1-phosphono-2-(pyridinium-3-yl)ethyl]phosphonate monohydrate, C7H11NO7P2·H2O, (I), in which just one phosphonate group is negatively charged. Recrystallizations at pH values of 2 and 4 yielded risedronate dihydrate, or sodium [1-hydroxy-2-(pyridinium-3-yl)ethane-1,2-diyl]bis(phosphonate) dihydrate, Na+·C7H10NO7P2-·2H2O, (II). Finally, recrystallizations at pH values of 7 and 8 produced risedronate 2.5-hydrate, or sodium [1-hydroxy-2-(pyridinium-3-yl)ethane-1,2-diyl]bis(phosphonate) 2.5-hydrate, Na+·C7H10NO7P2-·2.5H2O, (III). At these four pH values, both phosphonate groups in (II) and (III) are negatively charged and coordinated to an Na+ ion. Crystals of (II), i.e. those grown at pH values of 2 and 4, have isomorphous polymeric ion aggregate structures with geminal phosphonate and alcohol groups coordinated to the same Na+ ion. On the other hand, crystals of (III), i.e. those grown at pH values of 7 and 8, have isomorphism polymeric ion aggregate structures with geminal phosphonate and alcohol groups coordinated to different Na+ ions.
Supporting information
CCDC references: 205286; 205287; 205288
For (I), crystals were grown from ethanol-water (Ratio?). For (II), crystals were grown by vapour diffusion of ethanol into a buffered (glycine-HCl, pH 2 or 4) aqueous solution. For (III), crystals were grown by vapour diffusion of ethanol into a buffered (Tris-HCl, pH 7 or 8) aqueous solution.
In (I), the solvate water molecule was disordered over two general positions. Owing to high correlations, donor H-atom positions were refined under restraint to idealized O—H and N—H distances, with a standard uncertainty of 0.03 Å, and H—R distances for the water molecules were also restrained (s.u. 0.06 Å). The remaining C—H H atoms were included as riding atoms, with Uiso(H) = 1.2Ueq of their parent atoms. Disordered O—H distances were restrained to equivalent idealized values, with an effective standard deviation of 0.03 Å. The highest peaks in the final difference Fourier maps were located along the C—P bonds.
For (II), owing to high correlations, O—H distances were restrained to equivalent idealized values, with a standard uncertainty of 0.04 Å, and H—R distances for the water molecules were also restrained (s.u. 0.04 Å). The remaining H-atom parameters were independently refined. The highest peaks in the final difference Fourier map were located along the C—P bonds and in the vicinity of the terminal water ligand.
For (III), the uncoordinated solvate water molecule was disordered about the twofold axis. The proposed model also includes two disordered positions for the Na+ cation, in addition to the bridging and terminal water ligands. Owing to high correlations, O—H distances and angles for the disordered water molecules were restrained to equivalent idealized values, with standard uncertainties of 0.03 Å and 0.04 Å Should this be °?, respectively. Displacement parameters for H atoms bound to the same disordered O atom were restrained to be similar (s.u. 0.01 Å2). The remaining H-atom parameters were independently refined without restraints. The highest peaks in the final difference Fourier map were located along the C—P bonds and in the vicinity of the disordered terminal water ligand.
For all compounds, data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Bruker, 2001); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: CIFTAB in SHELXL97-2 (Sheldrick, 2001).
(I) [1-hydroxy-1-phosphono-2-(pyridinium-3-yl)ethyl] phosphonate monohydrate
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Crystal data top
C7H11NO7P2·H2O | F(000) = 624 |
Mr = 301.12 | Dx = 1.825 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 940 reflections |
a = 7.1219 (15) Å | θ = 3.4–27.4° |
b = 10.694 (2) Å | µ = 0.43 mm−1 |
c = 14.710 (3) Å | T = 193 K |
β = 101.996 (4)° | Plate, colourless |
V = 1095.9 (4) Å3 | 0.15 × 0.08 × 0.02 mm |
Z = 4 | |
Data collection top
Bruker Platform CCD area-detector diffractometer | 2236 independent reflections |
Radiation source: normal-focus sealed tube | 1534 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.079 |
profile data from ω scans | θmax = 26.4°, θmin = 2.4° |
Absorption correction: integration (XPREP in SHELXTL; Bruker, 2001) | h = −8→8 |
Tmin = 0.936, Tmax = 0.991 | k = −13→13 |
8978 measured reflections | l = −18→18 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.108 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0469P)2 + 0.5123P] where P = (Fo2 + 2Fc2)/3 |
2236 reflections | (Δ/σ)max < 0.001 |
200 parameters | Δρmax = 0.46 e Å−3 |
20 restraints | Δρmin = −0.37 e Å−3 |
Crystal data top
C7H11NO7P2·H2O | V = 1095.9 (4) Å3 |
Mr = 301.12 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 7.1219 (15) Å | µ = 0.43 mm−1 |
b = 10.694 (2) Å | T = 193 K |
c = 14.710 (3) Å | 0.15 × 0.08 × 0.02 mm |
β = 101.996 (4)° | |
Data collection top
Bruker Platform CCD area-detector diffractometer | 2236 independent reflections |
Absorption correction: integration (XPREP in SHELXTL; Bruker, 2001) | 1534 reflections with I > 2σ(I) |
Tmin = 0.936, Tmax = 0.991 | Rint = 0.079 |
8978 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.043 | 20 restraints |
wR(F2) = 0.108 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | Δρmax = 0.46 e Å−3 |
2236 reflections | Δρmin = −0.37 e Å−3 |
200 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
C1 | 0.7711 (4) | 0.9039 (3) | 0.79317 (19) | 0.0116 (6) | |
C2 | 0.6223 (4) | 0.9471 (3) | 0.70585 (19) | 0.0139 (7) | |
H2A | 0.4998 | 0.9033 | 0.7060 | 0.017* | |
H2B | 0.5990 | 1.0376 | 0.7125 | 0.017* | |
C3 | 0.6720 (4) | 0.9268 (3) | 0.6121 (2) | 0.0141 (7) | |
C4 | 0.6395 (5) | 0.8117 (3) | 0.5685 (2) | 0.0182 (7) | |
H4 | 0.5938 | 0.7439 | 0.5996 | 0.022* | |
C5 | 0.7377 (5) | 0.8859 (3) | 0.4357 (2) | 0.0209 (8) | |
H5 | 0.7598 | 0.8704 | 0.3752 | 0.025* | |
C6 | 0.7730 (5) | 1.0016 (3) | 0.4753 (2) | 0.0195 (8) | |
H6 | 0.8196 | 1.0672 | 0.4425 | 0.023* | |
C7 | 0.7400 (4) | 1.0219 (3) | 0.5636 (2) | 0.0168 (7) | |
H7 | 0.7644 | 1.1021 | 0.5914 | 0.020* | |
N1 | 0.6718 (4) | 0.7950 (3) | 0.48312 (18) | 0.0204 (7) | |
H1 | 0.653 (5) | 0.718 (3) | 0.456 (2) | 0.025* | |
O1 | 1.0795 (3) | 0.9335 (2) | 0.71323 (14) | 0.0162 (5) | |
H1A | 1.101 (5) | 0.856 (3) | 0.714 (2) | 0.019* | |
O2 | 1.1424 (3) | 0.9378 (2) | 0.88740 (13) | 0.0146 (5) | |
O3 | 0.9781 (3) | 1.11895 (19) | 0.79189 (14) | 0.0169 (5) | |
O4 | 0.6117 (3) | 1.0746 (2) | 0.89900 (14) | 0.0183 (5) | |
O5 | 0.8071 (3) | 0.8922 (2) | 0.98008 (15) | 0.0196 (5) | |
H5A | 0.814 (5) | 0.944 (3) | 1.020 (3) | 0.023* | |
O6 | 0.4873 (3) | 0.8498 (2) | 0.87814 (15) | 0.0186 (5) | |
H6A | 0.392 (5) | 0.880 (3) | 0.878 (2) | 0.022* | |
O7 | 0.8111 (3) | 0.7734 (2) | 0.79271 (15) | 0.0163 (5) | |
H7A | 0.720 (5) | 0.733 (3) | 0.774 (2) | 0.020* | |
P1 | 1.00565 (12) | 0.98053 (7) | 0.79897 (5) | 0.0120 (2) | |
P2 | 0.66224 (12) | 0.94106 (8) | 0.89331 (5) | 0.0134 (2) | |
O8 | 0.1666 (6) | 0.7079 (5) | 0.7084 (5) | 0.0239 (14) | 0.799 (19) |
H8A | 0.278 (4) | 0.687 (4) | 0.704 (3) | 0.029* | 0.799 (19) |
H8B | 0.084 (5) | 0.662 (4) | 0.674 (3) | 0.029* | 0.799 (19) |
O9 | 0.169 (3) | 0.7380 (19) | 0.662 (3) | 0.039 (6) | 0.201 (19) |
H9A | 0.277 (11) | 0.706 (15) | 0.655 (9) | 0.047* | 0.201 (19) |
H9B | 0.077 (15) | 0.695 (12) | 0.628 (9) | 0.047* | 0.201 (19) |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0121 (16) | 0.0093 (17) | 0.0117 (14) | 0.0003 (12) | −0.0016 (12) | −0.0006 (11) |
C2 | 0.0126 (16) | 0.0168 (18) | 0.0106 (14) | 0.0018 (13) | −0.0018 (12) | −0.0003 (12) |
C3 | 0.0105 (16) | 0.0175 (19) | 0.0115 (14) | 0.0027 (13) | −0.0039 (12) | −0.0004 (13) |
C4 | 0.0193 (18) | 0.0165 (19) | 0.0165 (15) | 0.0028 (15) | −0.0016 (13) | 0.0018 (13) |
C5 | 0.0221 (19) | 0.027 (2) | 0.0123 (16) | 0.0062 (16) | 0.0010 (14) | 0.0008 (14) |
C6 | 0.0135 (18) | 0.026 (2) | 0.0168 (16) | 0.0012 (14) | −0.0015 (13) | 0.0075 (14) |
C7 | 0.0148 (17) | 0.0179 (18) | 0.0142 (15) | −0.0020 (14) | −0.0053 (13) | −0.0021 (13) |
N1 | 0.0273 (17) | 0.0153 (17) | 0.0161 (13) | 0.0031 (13) | −0.0014 (12) | −0.0047 (11) |
O1 | 0.0171 (12) | 0.0166 (13) | 0.0145 (11) | 0.0003 (11) | 0.0020 (9) | 0.0006 (9) |
O2 | 0.0133 (11) | 0.0147 (12) | 0.0137 (11) | 0.0009 (9) | −0.0020 (9) | 0.0005 (8) |
O3 | 0.0146 (12) | 0.0133 (13) | 0.0212 (12) | 0.0011 (9) | −0.0003 (10) | 0.0018 (9) |
O4 | 0.0183 (12) | 0.0145 (13) | 0.0211 (11) | 0.0015 (10) | 0.0016 (10) | −0.0029 (9) |
O5 | 0.0223 (13) | 0.0217 (14) | 0.0115 (11) | 0.0042 (11) | −0.0038 (10) | −0.0017 (9) |
O6 | 0.0135 (13) | 0.0161 (14) | 0.0258 (12) | −0.0008 (10) | 0.0032 (10) | −0.0017 (10) |
O7 | 0.0167 (13) | 0.0088 (13) | 0.0209 (12) | −0.0019 (9) | −0.0019 (10) | −0.0023 (9) |
P1 | 0.0121 (4) | 0.0110 (4) | 0.0111 (4) | −0.0002 (3) | −0.0014 (3) | −0.0002 (3) |
P2 | 0.0132 (4) | 0.0142 (5) | 0.0114 (4) | 0.0006 (4) | −0.0008 (3) | −0.0002 (3) |
O8 | 0.0139 (18) | 0.018 (3) | 0.038 (3) | 0.0023 (16) | 0.0000 (18) | −0.008 (2) |
O9 | 0.032 (9) | 0.014 (9) | 0.067 (15) | 0.000 (7) | 0.001 (10) | −0.005 (9) |
Geometric parameters (Å, º) top
C1—P1 | 1.846 (3) | C7—H7 | 0.9500 |
C1—P2 | 1.845 (3) | N1—H1 | 0.91 (3) |
C1—O7 | 1.424 (4) | O1—P1 | 1.548 (2) |
C1—C2 | 1.556 (4) | O1—H1A | 0.84 (3) |
C2—C3 | 1.509 (4) | O2—P1 | 1.524 (2) |
C2—H2A | 0.9900 | O3—P1 | 1.494 (2) |
C2—H2B | 0.9900 | O4—P2 | 1.479 (2) |
C3—C4 | 1.385 (4) | O5—P2 | 1.555 (2) |
C3—C7 | 1.386 (4) | O5—H5A | 0.80 (4) |
C4—N1 | 1.335 (4) | O6—P2 | 1.562 (2) |
C4—H4 | 0.9500 | O6—H6A | 0.76 (4) |
C5—N1 | 1.337 (4) | O7—H7A | 0.78 (3) |
C5—C6 | 1.367 (5) | O8—H8A | 0.84 (3) |
C5—H5 | 0.9500 | O8—H8B | 0.85 (3) |
C6—C7 | 1.386 (4) | O9—H9A | 0.87 (3) |
C6—H6 | 0.9500 | O9—H9B | 0.87 (3) |
| | | |
P1—C1—P2 | 113.20 (15) | C6—C7—C3 | 120.9 (3) |
C1—C2—C3 | 117.6 (2) | C6—C7—H7 | 119.6 |
O7—C1—P1 | 104.8 (2) | C3—C7—H7 | 119.6 |
O7—C1—P2 | 109.41 (19) | C4—N1—C5 | 122.8 (3) |
O7—C1—C2 | 112.9 (2) | C4—N1—H1 | 120 (2) |
C2—C1—P1 | 111.2 (2) | C5—N1—H1 | 117 (2) |
C2—C1—P2 | 105.5 (2) | P1—O1—H1A | 113 (2) |
C3—C2—H2A | 107.9 | P2—O5—H5A | 107 (3) |
C1—C2—H2A | 107.9 | P2—O6—H6A | 115 (3) |
C3—C2—H2B | 107.9 | C1—O7—H7A | 113 (3) |
C1—C2—H2B | 107.9 | O3—P1—O2 | 114.05 (12) |
H2A—C2—H2B | 107.2 | O3—P1—O1 | 109.09 (13) |
C4—C3—C7 | 117.1 (3) | O2—P1—O1 | 109.46 (12) |
C4—C3—C2 | 120.2 (3) | O3—P1—C1 | 109.40 (13) |
C7—C3—C2 | 122.5 (3) | O2—P1—C1 | 108.54 (13) |
N1—C4—C3 | 120.7 (3) | O1—P1—C1 | 105.99 (13) |
N1—C4—H4 | 119.7 | O4—P2—O5 | 113.92 (13) |
C3—C4—H4 | 119.7 | O4—P2—O6 | 114.53 (13) |
N1—C5—C6 | 119.3 (3) | O5—P2—O6 | 106.30 (13) |
N1—C5—H5 | 120.4 | O4—P2—C1 | 113.62 (13) |
C6—C5—H5 | 120.4 | O5—P2—C1 | 105.42 (13) |
C5—C6—C7 | 119.3 (3) | O6—P2—C1 | 101.92 (13) |
C5—C6—H6 | 120.4 | H8A—O8—H8B | 110 (4) |
C7—C6—H6 | 120.4 | H9A—O9—H9B | 108 (7) |
| | | |
O7—C1—C2—C3 | −59.8 (4) | O7—C1—P1—O2 | −59.6 (2) |
P2—C1—C2—C3 | −179.3 (2) | C2—C1—P1—O2 | 178.10 (19) |
P1—C1—C2—C3 | 57.6 (3) | P2—C1—P1—O2 | 59.51 (19) |
C1—C2—C3—C4 | 82.9 (4) | O7—C1—P1—O1 | 57.9 (2) |
C1—C2—C3—C7 | −101.0 (4) | C2—C1—P1—O1 | −64.4 (2) |
C7—C3—C4—N1 | −0.5 (5) | P2—C1—P1—O1 | 177.00 (15) |
C2—C3—C4—N1 | 175.8 (3) | O7—C1—P2—O4 | −178.88 (18) |
N1—C5—C6—C7 | 0.1 (5) | C2—C1—P2—O4 | −57.1 (2) |
C5—C6—C7—C3 | 0.0 (5) | P1—C1—P2—O4 | 64.68 (19) |
C4—C3—C7—C6 | 0.2 (5) | O7—C1—P2—O5 | 55.7 (2) |
C2—C3—C7—C6 | −176.0 (3) | C2—C1—P2—O5 | 177.45 (19) |
C3—C4—N1—C5 | 0.6 (5) | P1—C1—P2—O5 | −60.75 (19) |
C6—C5—N1—C4 | −0.4 (5) | O7—C1—P2—O6 | −55.1 (2) |
O7—C1—P1—O3 | 175.34 (16) | C2—C1—P2—O6 | 66.6 (2) |
C2—C1—P1—O3 | 53.1 (2) | P1—C1—P2—O6 | −171.59 (15) |
P2—C1—P1—O3 | −65.51 (18) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2i | 0.91 (3) | 1.94 (4) | 2.847 (4) | 172 (3) |
O1—H1A···O8ii | 0.84 (3) | 1.66 (4) | 2.496 (6) | 172 (4) |
O1—H1A···O9ii | 0.84 (3) | 1.61 (4) | 2.355 (18) | 147 (4) |
O5—H5A···O2iii | 0.80 (4) | 1.84 (4) | 2.634 (3) | 174 (4) |
O6—H6A···O2iv | 0.76 (4) | 1.91 (4) | 2.661 (3) | 172 (4) |
O7—H7A···O3v | 0.78 (3) | 1.96 (4) | 2.730 (3) | 168 (3) |
O8—H8A···O3v | 0.84 (3) | 1.87 (3) | 2.704 (5) | 170 (5) |
O8—H8B···O4vi | 0.85 (3) | 1.83 (3) | 2.675 (5) | 174 (5) |
Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) x+1, y, z; (iii) −x+2, −y+2, −z+2; (iv) x−1, y, z; (v) −x+3/2, y−1/2, −z+3/2; (vi) −x+1/2, y−1/2, −z+3/2. |
(II) sodium [1-hydroxy-2-(pyridinium-3-yl)ethane-1,2-diyl]bis(phosphonate) dihydrate
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Crystal data top
[Na(C7H10NO7P2)]·2H2O | Z = 2 |
Mr = 341.12 | F(000) = 352 |
Triclinic, P1 | Dx = 1.729 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.663 (4) Å | Cell parameters from 914 reflections |
b = 8.039 (4) Å | θ = 3.1–27.5° |
c = 10.770 (5) Å | µ = 0.41 mm−1 |
α = 93.655 (8)° | T = 193 K |
β = 95.277 (9)° | Tabular, colourless |
γ = 96.017 (8)° | 0.20 × 0.16 × 0.06 mm |
V = 655.2 (6) Å3 | |
Data collection top
Bruker Platform CCD area-detector diffractometer | 2586 independent reflections |
Radiation source: normal-focus sealed tube | 2007 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
profile data from ω scans | θmax = 26.3°, θmin = 1.9° |
Absorption correction: integration (XPREP in SHELXTL; Bruker, 2001) | h = −9→9 |
Tmin = 0.935, Tmax = 0.976 | k = −9→9 |
4297 measured reflections | l = −13→12 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.100 | All H-atom parameters refined |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0513P)2 + 0.2778P] where P = (Fo2 + 2Fc2)/3 |
2586 reflections | (Δ/σ)max < 0.001 |
237 parameters | Δρmax = 0.50 e Å−3 |
10 restraints | Δρmin = −0.31 e Å−3 |
Crystal data top
[Na(C7H10NO7P2)]·2H2O | γ = 96.017 (8)° |
Mr = 341.12 | V = 655.2 (6) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.663 (4) Å | Mo Kα radiation |
b = 8.039 (4) Å | µ = 0.41 mm−1 |
c = 10.770 (5) Å | T = 193 K |
α = 93.655 (8)° | 0.20 × 0.16 × 0.06 mm |
β = 95.277 (9)° | |
Data collection top
Bruker Platform CCD area-detector diffractometer | 2586 independent reflections |
Absorption correction: integration (XPREP in SHELXTL; Bruker, 2001) | 2007 reflections with I > 2σ(I) |
Tmin = 0.935, Tmax = 0.976 | Rint = 0.027 |
4297 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.040 | 10 restraints |
wR(F2) = 0.100 | All H-atom parameters refined |
S = 1.02 | Δρmax = 0.50 e Å−3 |
2586 reflections | Δρmin = −0.31 e Å−3 |
237 parameters | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.3232 (3) | 0.2678 (3) | 0.8179 (2) | 0.0139 (5) | |
C2 | 0.4124 (4) | 0.1367 (4) | 0.7389 (2) | 0.0180 (6) | |
H2A | 0.356 (4) | 0.017 (4) | 0.754 (3) | 0.028 (8)* | |
H2B | 0.532 (4) | 0.150 (3) | 0.767 (3) | 0.018 (8)* | |
C3 | 0.3988 (4) | 0.1580 (3) | 0.6000 (2) | 0.0168 (6) | |
H3 | 0.317 (5) | −0.018 (4) | 1.006 (4) | 0.047 (12)* | |
C4 | 0.2684 (4) | 0.0634 (4) | 0.5190 (3) | 0.0180 (6) | |
H4 | 0.189 (4) | −0.020 (4) | 0.543 (3) | 0.026 (8)* | |
C5 | 0.3625 (4) | 0.1961 (4) | 0.3453 (3) | 0.0224 (6) | |
H5 | 0.349 (4) | 0.204 (4) | 0.260 (3) | 0.020 (8)* | |
C6 | 0.4970 (4) | 0.2925 (4) | 0.4189 (3) | 0.0237 (7) | |
H6 | 0.571 (4) | 0.364 (4) | 0.384 (3) | 0.026 (9)* | |
C7 | 0.5154 (4) | 0.2731 (4) | 0.5473 (3) | 0.0208 (6) | |
H7 | 0.609 (4) | 0.336 (4) | 0.599 (3) | 0.020 (8)* | |
N1 | 0.2524 (3) | 0.0835 (3) | 0.3953 (2) | 0.0197 (5) | |
H1 | 0.157 (5) | 0.016 (4) | 0.343 (3) | 0.049 (11)* | |
O1 | 0.3249 (2) | 0.3736 (2) | 1.06585 (16) | 0.0168 (4) | |
O2 | 0.5749 (2) | 0.2091 (2) | 1.00145 (16) | 0.0164 (4) | |
O3 | 0.2663 (3) | 0.0629 (2) | 1.00848 (18) | 0.0180 (4) | |
O4 | 0.0077 (3) | 0.0739 (2) | 0.75170 (18) | 0.0225 (5) | |
O5 | 0.0033 (2) | 0.3670 (2) | 0.86649 (18) | 0.0216 (4) | |
O6 | 0.0666 (3) | 0.3298 (3) | 0.63889 (18) | 0.0231 (5) | |
H6A | 0.071 (5) | 0.429 (4) | 0.633 (4) | 0.050 (12)* | |
O7 | 0.3878 (3) | 0.4381 (2) | 0.79510 (17) | 0.0197 (4) | |
H7A | 0.474 (4) | 0.477 (4) | 0.840 (3) | 0.030 (9)* | |
O8 | 0.9942 (3) | 0.2415 (3) | 1.1526 (2) | 0.0259 (5) | |
H8A | 1.105 (4) | 0.276 (5) | 1.139 (4) | 0.061 (13)* | |
H8B | 0.981 (6) | 0.132 (4) | 1.116 (5) | 0.12 (2)* | |
P1 | 0.38048 (9) | 0.23113 (8) | 0.98527 (6) | 0.01261 (18) | |
P2 | 0.08085 (9) | 0.25709 (9) | 0.77387 (6) | 0.01525 (19) | |
Na1 | 0.81703 (14) | 0.40337 (13) | 1.02371 (10) | 0.0197 (3) | |
O9 | 0.0864 (3) | 0.6585 (3) | 0.6179 (2) | 0.0332 (5) | |
H9A | 0.041 (7) | 0.696 (7) | 0.688 (3) | 0.12 (2)* | |
H9B | 0.016 (5) | 0.666 (5) | 0.555 (3) | 0.067 (14)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0160 (14) | 0.0119 (13) | 0.0145 (12) | 0.0034 (10) | 0.0016 (10) | 0.0022 (10) |
C2 | 0.0187 (16) | 0.0230 (15) | 0.0132 (13) | 0.0072 (12) | 0.0024 (11) | −0.0002 (11) |
C3 | 0.0203 (15) | 0.0169 (14) | 0.0148 (13) | 0.0078 (12) | 0.0043 (11) | −0.0008 (11) |
C4 | 0.0182 (15) | 0.0183 (14) | 0.0182 (14) | 0.0038 (12) | 0.0045 (11) | 0.0003 (12) |
C5 | 0.0248 (16) | 0.0299 (16) | 0.0141 (14) | 0.0094 (13) | 0.0031 (11) | 0.0027 (12) |
C6 | 0.0248 (17) | 0.0226 (16) | 0.0257 (15) | 0.0033 (13) | 0.0089 (13) | 0.0075 (13) |
C7 | 0.0182 (15) | 0.0216 (15) | 0.0219 (15) | 0.0026 (12) | 0.0013 (12) | −0.0029 (12) |
N1 | 0.0188 (13) | 0.0243 (13) | 0.0156 (11) | 0.0039 (10) | 0.0002 (10) | −0.0025 (10) |
O1 | 0.0191 (10) | 0.0173 (10) | 0.0143 (9) | 0.0050 (8) | 0.0005 (7) | −0.0011 (8) |
O2 | 0.0155 (10) | 0.0151 (9) | 0.0185 (9) | 0.0023 (8) | −0.0001 (7) | 0.0023 (8) |
O3 | 0.0171 (10) | 0.0133 (10) | 0.0242 (10) | 0.0022 (8) | 0.0033 (8) | 0.0042 (8) |
O4 | 0.0221 (11) | 0.0181 (10) | 0.0249 (10) | −0.0015 (8) | −0.0047 (8) | −0.0002 (8) |
O5 | 0.0169 (10) | 0.0241 (11) | 0.0233 (10) | 0.0037 (8) | 0.0009 (8) | −0.0039 (8) |
O6 | 0.0291 (12) | 0.0238 (12) | 0.0169 (10) | 0.0086 (10) | −0.0032 (8) | 0.0039 (9) |
O7 | 0.0228 (12) | 0.0172 (10) | 0.0170 (10) | −0.0044 (9) | −0.0035 (8) | 0.0042 (8) |
O8 | 0.0227 (12) | 0.0273 (12) | 0.0291 (12) | 0.0057 (10) | 0.0051 (9) | 0.0055 (9) |
P1 | 0.0142 (4) | 0.0127 (3) | 0.0110 (3) | 0.0021 (3) | 0.0006 (2) | 0.0009 (3) |
P2 | 0.0155 (4) | 0.0153 (4) | 0.0146 (3) | 0.0028 (3) | −0.0010 (3) | −0.0001 (3) |
Na1 | 0.0165 (6) | 0.0187 (6) | 0.0238 (6) | 0.0019 (4) | 0.0011 (4) | 0.0020 (5) |
O9 | 0.0390 (14) | 0.0341 (13) | 0.0277 (13) | 0.0111 (11) | −0.0003 (11) | 0.0054 (11) |
Geometric parameters (Å, º) top
C1—P1 | 1.865 (3) | O1—Na1i | 2.401 (2) |
C1—P2 | 1.866 (3) | O2—P1 | 1.514 (2) |
C1—O7 | 1.450 (3) | O2—Na1 | 2.281 (2) |
C1—C2 | 1.564 (4) | O3—P1 | 1.579 (2) |
C2—C3 | 1.512 (4) | O3—H3 | 0.79 (3) |
C2—H2A | 1.04 (3) | O4—P2 | 1.515 (2) |
C2—H2B | 0.93 (3) | O5—P2 | 1.495 (2) |
C3—C4 | 1.390 (4) | O5—Na1ii | 2.337 (2) |
C3—C7 | 1.401 (4) | O5—Na1i | 2.364 (2) |
C4—N1 | 1.348 (4) | O6—P2 | 1.600 (2) |
C4—H4 | 0.92 (3) | O6—H6A | 0.80 (3) |
C5—N1 | 1.344 (4) | O7—Na1i | 2.926 (2) |
C5—C6 | 1.377 (4) | O7—H7A | 0.81 (3) |
C5—H5 | 0.92 (3) | O8—Na1 | 2.391 (2) |
C6—C7 | 1.398 (4) | O8—H8A | 0.89 (3) |
C6—H6 | 0.89 (3) | O8—H8B | 0.93 (3) |
C7—H7 | 0.95 (3) | O9—H9A | 0.90 (3) |
N1—H1 | 0.97 (4) | O9—H9B | 0.84 (3) |
O1—P1 | 1.5134 (19) | | |
| | | |
O7—C1—C2 | 111.4 (2) | P2—O6—H6A | 120 (3) |
O7—C1—P1 | 109.70 (16) | C1—O7—Na1i | 95.03 (14) |
C2—C1—P1 | 106.48 (17) | C1—O7—H7A | 114 (2) |
O7—C1—P2 | 103.45 (16) | Na1i—O7—H7A | 86 (2) |
C2—C1—P2 | 112.70 (18) | Na1—O8—H8A | 104 (2) |
P1—C1—P2 | 113.21 (14) | Na1—O8—H8B | 108 (3) |
C3—C2—C1 | 114.8 (2) | H8A—O8—H8B | 101 (3) |
C3—C2—H2A | 109.1 (17) | O1—P1—O2 | 115.54 (10) |
C1—C2—H2A | 108.4 (17) | O1—P1—O3 | 109.01 (12) |
C3—C2—H2B | 106.9 (17) | O2—P1—O3 | 110.28 (11) |
C1—C2—H2B | 106.9 (17) | O1—P1—C1 | 108.46 (11) |
H2A—C2—H2B | 111 (3) | O2—P1—C1 | 107.40 (11) |
C4—C3—C7 | 117.2 (2) | O3—P1—C1 | 105.67 (11) |
C4—C3—C2 | 120.9 (3) | O5—P2—O4 | 119.07 (12) |
C7—C3—C2 | 121.9 (3) | O5—P2—O6 | 110.73 (12) |
N1—C4—C3 | 121.6 (3) | O4—P2—O6 | 105.29 (11) |
N1—C4—H4 | 114.4 (19) | O5—P2—C1 | 108.75 (11) |
C3—C4—H4 | 124.0 (19) | O4—P2—C1 | 108.09 (11) |
N1—C5—C6 | 120.8 (3) | O6—P2—C1 | 103.81 (12) |
N1—C5—H5 | 118.7 (19) | O2—Na1—O5iii | 112.52 (8) |
C6—C5—H5 | 120.4 (19) | O2—Na1—O5i | 151.92 (8) |
C5—C6—C7 | 118.7 (3) | O5iii—Na1—O5i | 95.50 (8) |
C5—C6—H6 | 120 (2) | O2—Na1—O8 | 94.91 (9) |
C7—C6—H6 | 121 (2) | O5iii—Na1—O8 | 88.77 (8) |
C6—C7—C3 | 120.5 (3) | O5i—Na1—O8 | 83.45 (9) |
C6—C7—H7 | 119.8 (18) | O2—Na1—O1i | 96.68 (8) |
C3—C7—H7 | 119.7 (17) | O5iii—Na1—O1i | 96.26 (8) |
C5—N1—C4 | 121.2 (3) | O5i—Na1—O1i | 81.47 (8) |
C5—N1—H1 | 121 (2) | O8—Na1—O1i | 164.48 (8) |
C4—N1—H1 | 118 (2) | O2—Na1—O7i | 81.75 (7) |
P1—O1—Na1i | 121.73 (10) | O5iii—Na1—O7i | 161.48 (8) |
P1—O2—Na1 | 130.52 (11) | O5i—Na1—O7i | 71.30 (7) |
P1—O3—H3 | 115 (3) | O8—Na1—O7i | 102.14 (8) |
P2—O5—Na1ii | 150.98 (13) | O1i—Na1—O7i | 69.49 (7) |
P2—O5—Na1i | 119.39 (12) | H9A—O9—H9B | 110 (4) |
Na1ii—O5—Na1i | 84.50 (8) | | |
| | | |
O7—C1—C2—C3 | −53.9 (3) | C2—C1—P1—O2 | 44.6 (2) |
P1—C1—C2—C3 | −173.5 (2) | P2—C1—P1—O2 | 169.00 (12) |
P2—C1—C2—C3 | 61.8 (3) | O7—C1—P1—O3 | 166.27 (16) |
C1—C2—C3—C4 | −97.2 (3) | C2—C1—P1—O3 | −73.1 (2) |
C1—C2—C3—C7 | 82.6 (3) | P2—C1—P1—O3 | 51.28 (16) |
C7—C3—C4—N1 | −1.2 (4) | Na1ii—O5—P2—O4 | 8.1 (3) |
C2—C3—C4—N1 | 178.6 (2) | Na1i—O5—P2—O4 | 150.12 (11) |
N1—C5—C6—C7 | −1.1 (4) | Na1ii—O5—P2—O6 | 130.3 (2) |
C5—C6—C7—C3 | −0.1 (4) | Na1i—O5—P2—O6 | −87.66 (14) |
C4—C3—C7—C6 | 1.2 (4) | Na1ii—O5—P2—C1 | −116.3 (2) |
C2—C3—C7—C6 | −178.6 (3) | Na1i—O5—P2—C1 | 25.80 (16) |
C6—C5—N1—C4 | 1.1 (4) | O7—C1—P2—O5 | −68.25 (18) |
C3—C4—N1—C5 | 0.0 (4) | C2—C1—P2—O5 | 171.35 (18) |
C2—C1—O7—Na1i | −177.37 (17) | P1—C1—P2—O5 | 50.42 (17) |
P1—C1—O7—Na1i | −59.75 (15) | O7—C1—P2—O4 | 161.15 (15) |
P2—C1—O7—Na1i | 61.32 (13) | C2—C1—P2—O4 | 40.8 (2) |
Na1i—O1—P1—O2 | 121.61 (12) | P1—C1—P2—O4 | −80.17 (15) |
Na1i—O1—P1—O3 | −113.58 (13) | O7—C1—P2—O6 | 49.68 (17) |
Na1i—O1—P1—C1 | 1.02 (16) | C2—C1—P2—O6 | −70.7 (2) |
Na1—O2—P1—O1 | −41.36 (17) | P1—C1—P2—O6 | 168.36 (12) |
Na1—O2—P1—O3 | −165.52 (12) | P1—O2—Na1—O5iii | −120.70 (14) |
Na1—O2—P1—C1 | 79.80 (15) | P1—O2—Na1—O5i | 63.3 (2) |
O7—C1—P1—O1 | 49.5 (2) | P1—O2—Na1—O8 | 148.59 (14) |
C2—C1—P1—O1 | 170.13 (17) | P1—O2—Na1—O1i | −21.07 (15) |
P2—C1—P1—O1 | −65.48 (16) | P1—O2—Na1—O7i | 47.00 (14) |
O7—C1—P1—O2 | −76.01 (18) | | |
Symmetry codes: (i) −x+1, −y+1, −z+2; (ii) x−1, y, z; (iii) x+1, y, z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···O2iv | 0.79 (3) | 1.82 (3) | 2.613 (3) | 177 (4) |
N1—H1···O4v | 0.97 (4) | 1.63 (4) | 2.592 (3) | 173 (3) |
O6—H6A···O9 | 0.80 (3) | 1.86 (3) | 2.656 (3) | 178 (4) |
O7—H7A···O1i | 0.81 (3) | 2.00 (3) | 2.791 (3) | 166 (3) |
O8—H8A···O1iii | 0.89 (3) | 2.03 (3) | 2.902 (3) | 165 (3) |
O8—H8A···O3iii | 0.89 (3) | 2.63 (4) | 3.124 (3) | 116 (3) |
O8—H8B···O4iv | 0.93 (3) | 2.25 (4) | 2.797 (3) | 116 (4) |
O8—H8B···O3iv | 0.93 (3) | 2.55 (4) | 3.283 (3) | 136 (4) |
O9—H9A···O8i | 0.90 (3) | 1.81 (3) | 2.696 (3) | 165 (5) |
O9—H9B···O6vi | 0.84 (3) | 2.13 (3) | 2.914 (3) | 156 (4) |
Symmetry codes: (i) −x+1, −y+1, −z+2; (iii) x+1, y, z; (iv) −x+1, −y, −z+2; (v) −x, −y, −z+1; (vi) −x, −y+1, −z+1. |
(III) sodium [1-hydroxy-2-(pyridinium-3-yl)ethane-1,2-diyl]bis(phosphonate) 2.5-hydrate
top
Crystal data top
[Na(C7H10NO7P2)]·2.5H2O | F(000) = 1448 |
Mr = 350.13 | Dx = 1.750 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 963 reflections |
a = 21.664 (7) Å | θ = 2.5–28.2° |
b = 8.930 (3) Å | µ = 0.41 mm−1 |
c = 15.123 (5) Å | T = 193 K |
β = 114.692 (5)° | Plate, colourless |
V = 2658.3 (14) Å3 | 0.30 × 0.20 × 0.06 mm |
Z = 8 | |
Data collection top
Bruker Platform CCD area-detector diffractometer | 2435 independent reflections |
Radiation source: normal-focus sealed tube | 2142 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.035 |
profile data from ω scans | θmax = 25.4°, θmin = 2.1° |
Absorption correction: integration (XPREP in SHELXTL; Bruker, 2001) | h = −26→26 |
Tmin = 0.886, Tmax = 0.977 | k = −10→10 |
13009 measured reflections | l = −18→18 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.030 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.082 | w = 1/[σ2(Fo2) + (0.0468P)2 + 2.844P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max = 0.043 |
2435 reflections | Δρmax = 0.37 e Å−3 |
298 parameters | Δρmin = −0.35 e Å−3 |
33 restraints | |
Crystal data top
[Na(C7H10NO7P2)]·2.5H2O | V = 2658.3 (14) Å3 |
Mr = 350.13 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 21.664 (7) Å | µ = 0.41 mm−1 |
b = 8.930 (3) Å | T = 193 K |
c = 15.123 (5) Å | 0.30 × 0.20 × 0.06 mm |
β = 114.692 (5)° | |
Data collection top
Bruker Platform CCD area-detector diffractometer | 2435 independent reflections |
Absorption correction: integration (XPREP in SHELXTL; Bruker, 2001) | 2142 reflections with I > 2σ(I) |
Tmin = 0.886, Tmax = 0.977 | Rint = 0.035 |
13009 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.030 | 33 restraints |
wR(F2) = 0.082 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.37 e Å−3 |
2435 reflections | Δρmin = −0.35 e Å−3 |
298 parameters | |
Special details top
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
C1 | 0.18418 (3) | 0.17780 (8) | 0.13259 (5) | 0.01594 (18) | |
C2 | 0.16365 (3) | 0.20481 (8) | 0.02299 (5) | 0.01806 (19) | |
H2A | 0.1770 (4) | 0.3038 (9) | 0.0141 (6) | 0.021 (2)* | |
H2B | 0.1891 (4) | 0.1347 (9) | 0.0046 (5) | 0.022 (2)* | |
C3 | 0.08923 (3) | 0.19088 (8) | −0.04326 (5) | 0.01867 (19) | |
C4 | 0.05589 (4) | 0.05430 (8) | −0.06006 (5) | 0.0215 (2) | |
H4 | 0.0777 (4) | −0.0377 (10) | −0.0288 (6) | 0.032 (2)* | |
C5 | −0.04662 (4) | 0.16229 (10) | −0.16919 (6) | 0.0328 (3) | |
H5 | −0.0920 (4) | 0.1423 (10) | −0.2120 (6) | 0.031 (2)* | |
C6 | −0.01629 (4) | 0.30027 (9) | −0.15586 (7) | 0.0355 (3) | |
H6 | −0.0420 (5) | 0.3858 (12) | −0.1913 (7) | 0.051 (3)* | |
C7 | 0.05160 (4) | 0.31445 (9) | −0.09327 (6) | 0.0255 (2) | |
H7 | 0.0752 (4) | 0.4067 (10) | −0.0834 (6) | 0.027 (2)* | |
N1 | −0.01021 (3) | 0.04412 (7) | −0.12154 (4) | 0.02509 (18) | |
H1 | −0.0284 (4) | −0.0458 (10) | −0.1303 (6) | 0.031 (2)* | |
O1 | 0.17452 (2) | 0.33081 (6) | 0.28632 (3) | 0.02135 (14) | |
O2 | 0.06638 (2) | 0.22480 (6) | 0.15299 (4) | 0.02562 (15) | |
O3 | 0.12315 (2) | 0.44818 (5) | 0.12027 (3) | 0.02050 (14) | |
H3 | 0.1500 (4) | 0.5060 (11) | 0.1493 (6) | 0.039 (3)* | |
O4 | 0.29017 (2) | 0.37352 (5) | 0.18174 (3) | 0.01967 (13) | |
O5 | 0.29920 (2) | 0.16274 (5) | 0.30063 (3) | 0.01915 (14) | |
O6 | 0.30941 (2) | 0.10793 (6) | 0.14425 (3) | 0.02028 (13) | |
H6A | 0.3173 (4) | 0.0324 (10) | 0.1656 (6) | 0.035 (3)* | |
O7 | 0.17200 (2) | 0.02148 (5) | 0.14404 (3) | 0.01952 (13) | |
H7A | 0.1885 (4) | −0.0050 (11) | 0.2017 (6) | 0.040 (3)* | |
P1 | 0.134467 (9) | 0.29890 (2) | 0.179316 (12) | 0.01704 (5) | |
P2 | 0.276249 (8) | 0.213258 (19) | 0.196487 (12) | 0.01546 (5) | |
O8 | 0.20512 (6) | 0.11753 (12) | 0.42805 (7) | 0.0354 (3) | 0.5295 (8) |
H8A | 0.1719 (6) | 0.1699 (13) | 0.3865 (11) | 0.033 (2)* | 0.5295 (8) |
H8B | 0.2001 (7) | 0.0338 (11) | 0.3997 (10) | 0.035 (2)* | 0.5295 (8) |
O9 | 0.39181 (6) | 0.19818 (13) | 0.51643 (8) | 0.0412 (4) | 0.5295 (8) |
H9A | 0.4059 (7) | 0.1303 (15) | 0.4931 (8) | 0.047 (2)* | 0.5295 (8) |
H9B | 0.4046 (8) | 0.1929 (19) | 0.5764 (7) | 0.046 (3)* | 0.5295 (8) |
Na1 | 0.28640 (3) | 0.30120 (6) | 0.42011 (4) | 0.02034 (15) | 0.5295 (8) |
O10 | −0.02274 (5) | 0.36128 (13) | 0.20791 (8) | 0.0302 (3) | 0.50 |
H10A | 0.0065 (5) | 0.3064 (17) | 0.2012 (9) | 0.052 (4)* | 0.50 |
H10B | −0.0279 (6) | 0.3211 (19) | 0.2552 (8) | 0.054 (4)* | 0.50 |
O11 | 0.20852 (10) | 0.11342 (16) | 0.43226 (10) | 0.0628 (6) | 0.4705 (8) |
H11A | 0.2261 (7) | 0.0448 (13) | 0.4124 (11) | 0.037 (2)* | 0.4705 (8) |
H11B | 0.1925 (8) | 0.1749 (13) | 0.3839 (10) | 0.034 (2)* | 0.4705 (8) |
O12 | 0.42451 (7) | 0.19805 (14) | 0.51646 (10) | 0.0365 (4) | 0.4705 (8) |
H12A | 0.4249 (9) | 0.1268 (15) | 0.4778 (9) | 0.050 (3)* | 0.4705 (8) |
H12B | 0.4666 (6) | 0.199 (2) | 0.5528 (12) | 0.045 (2)* | 0.4705 (8) |
Na2 | 0.30391 (4) | 0.29778 (8) | 0.43197 (5) | 0.0284 (2) | 0.4705 (8) |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0198 (3) | 0.0117 (3) | 0.0171 (3) | −0.0022 (3) | 0.0085 (2) | −0.0006 (2) |
C2 | 0.0190 (3) | 0.0179 (3) | 0.0179 (3) | −0.0008 (3) | 0.0083 (2) | 0.0005 (3) |
C3 | 0.0205 (3) | 0.0207 (3) | 0.0162 (3) | −0.0029 (3) | 0.0090 (2) | −0.0039 (3) |
C4 | 0.0229 (3) | 0.0206 (4) | 0.0199 (3) | −0.0029 (3) | 0.0079 (2) | −0.0007 (3) |
C5 | 0.0169 (3) | 0.0310 (4) | 0.0444 (4) | −0.0017 (3) | 0.0066 (3) | −0.0057 (4) |
C6 | 0.0228 (4) | 0.0237 (4) | 0.0494 (5) | 0.0063 (3) | 0.0046 (3) | −0.0005 (4) |
C7 | 0.0230 (3) | 0.0189 (4) | 0.0322 (4) | −0.0011 (3) | 0.0089 (3) | −0.0039 (3) |
N1 | 0.0234 (3) | 0.0219 (3) | 0.0302 (3) | −0.0065 (2) | 0.0114 (2) | −0.0049 (3) |
O1 | 0.0308 (2) | 0.0166 (2) | 0.0195 (2) | 0.0000 (2) | 0.01335 (16) | −0.00105 (19) |
O2 | 0.0262 (2) | 0.0193 (3) | 0.0368 (2) | −0.0051 (2) | 0.01850 (17) | −0.0064 (2) |
O3 | 0.0223 (2) | 0.0132 (2) | 0.0224 (2) | −0.00152 (19) | 0.00568 (16) | −0.00198 (19) |
O4 | 0.0224 (2) | 0.0147 (2) | 0.0205 (2) | −0.00070 (19) | 0.00753 (16) | 0.00074 (19) |
O5 | 0.0226 (2) | 0.0173 (2) | 0.0167 (2) | 0.00288 (19) | 0.00730 (16) | 0.00066 (18) |
O6 | 0.0258 (2) | 0.0171 (2) | 0.0208 (2) | 0.00398 (19) | 0.01261 (15) | 0.00237 (19) |
O7 | 0.0278 (2) | 0.0123 (2) | 0.0189 (2) | −0.00207 (19) | 0.01019 (16) | 0.00026 (18) |
P1 | 0.02007 (7) | 0.01364 (8) | 0.01976 (7) | −0.00119 (6) | 0.01065 (5) | −0.00167 (6) |
P2 | 0.01788 (7) | 0.01310 (8) | 0.01540 (7) | 0.00019 (6) | 0.00696 (5) | 0.00006 (6) |
O8 | 0.0687 (6) | 0.0204 (5) | 0.0144 (4) | 0.0208 (5) | 0.0148 (4) | 0.0028 (4) |
O9 | 0.0491 (6) | 0.0325 (6) | 0.0299 (5) | 0.0106 (5) | 0.0044 (5) | −0.0055 (5) |
Na1 | 0.0254 (2) | 0.0201 (3) | 0.0160 (2) | −0.0024 (2) | 0.00914 (17) | −0.00226 (19) |
O10 | 0.0279 (4) | 0.0334 (6) | 0.0344 (5) | 0.0071 (4) | 0.0180 (3) | 0.0057 (4) |
O11 | 0.1445 (11) | 0.0202 (7) | 0.0489 (6) | −0.0159 (8) | 0.0652 (6) | −0.0015 (6) |
O12 | 0.0361 (7) | 0.0257 (6) | 0.0367 (6) | 0.0014 (5) | 0.0043 (5) | −0.0078 (5) |
Na2 | 0.0403 (3) | 0.0245 (3) | 0.0250 (3) | −0.0049 (3) | 0.0181 (2) | −0.0031 (3) |
Geometric parameters (Å, º) top
C1—P1 | 1.8613 (9) | O5—P2 | 1.5089 (7) |
C1—P2 | 1.8445 (8) | O5—Na2 | 2.2891 (11) |
C1—O7 | 1.4445 (9) | O5—Na1 | 2.2997 (9) |
C1—C2 | 1.5451 (11) | O6—P2 | 1.5808 (6) |
C2—C3 | 1.5064 (10) | O6—H6A | 0.736 (9) |
C2—H2A | 0.957 (8) | O7—Na2i | 2.4668 (11) |
C2—H2B | 0.949 (9) | O7—Na1i | 2.5205 (9) |
C3—C4 | 1.3858 (11) | O7—H7A | 0.827 (9) |
C3—C7 | 1.3924 (10) | O8—Na1ii | 2.3413 (14) |
C4—N1 | 1.3457 (9) | O8—Na1 | 2.4458 (15) |
C4—H4 | 0.967 (9) | O8—H8A | 0.868 (11) |
C5—N1 | 1.3342 (11) | O8—H8B | 0.846 (11) |
C5—C6 | 1.3711 (13) | O9—Na1 | 2.3246 (14) |
C5—H5 | 0.941 (8) | O9—H9A | 0.822 (13) |
C6—C7 | 1.3828 (11) | O9—H9B | 0.832 (10) |
C6—H6 | 0.965 (10) | O10—H10A | 0.841 (13) |
C7—H7 | 0.949 (9) | O10—H10B | 0.848 (13) |
N1—H1 | 0.880 (9) | O11—Na2 | 2.644 (2) |
O1—P1 | 1.5098 (6) | O11—H11A | 0.841 (14) |
O1—Na1 | 2.4375 (9) | O11—H11B | 0.863 (12) |
O1—Na2 | 2.7636 (10) | O12—Na2 | 2.5422 (16) |
O2—P1 | 1.5104 (7) | O12—H12A | 0.867 (14) |
O3—P1 | 1.5657 (6) | O12—H12B | 0.845 (11) |
O3—H3 | 0.765 (9) | Na2—O11ii | 2.319 (2) |
O4—P2 | 1.4983 (7) | | |
| | | |
O7—C1—C2 | 107.12 (5) | O5—P2—C1 | 107.95 (3) |
O7—C1—P2 | 108.35 (4) | O6—P2—C1 | 104.70 (3) |
C2—C1—P2 | 107.39 (5) | Na1ii—O8—Na1 | 94.43 (4) |
O7—C1—P1 | 110.64 (5) | Na1ii—O8—H8A | 104.2 (11) |
C2—C1—P1 | 111.32 (5) | Na1—O8—H8A | 89.9 (9) |
P2—C1—P1 | 111.84 (4) | Na1ii—O8—H8B | 135.3 (11) |
C3—C2—C1 | 116.69 (7) | Na1—O8—H8B | 120.7 (12) |
C3—C2—H2A | 106.5 (4) | H8A—O8—H8B | 102.6 (12) |
C1—C2—H2A | 109.1 (5) | Na1—O9—H9A | 117.9 (8) |
C3—C2—H2B | 110.0 (4) | Na1—O9—H9B | 119.9 (12) |
C1—C2—H2B | 105.6 (5) | H9A—O9—H9B | 114.3 (14) |
H2A—C2—H2B | 108.8 (8) | O5—Na1—O9 | 82.55 (4) |
C4—C3—C7 | 117.12 (6) | O5—Na1—O8ii | 162.08 (4) |
C4—C3—C2 | 121.71 (6) | O9—Na1—O8ii | 81.61 (5) |
C7—C3—C2 | 121.12 (6) | O5—Na1—O1 | 79.08 (3) |
N1—C4—C3 | 120.58 (6) | O9—Na1—O1 | 159.89 (4) |
N1—C4—H4 | 116.2 (5) | O8ii—Na1—O1 | 115.08 (4) |
C3—C4—H4 | 123.2 (5) | O5—Na1—O8 | 90.21 (4) |
N1—C5—C6 | 119.50 (7) | O9—Na1—O8 | 104.05 (5) |
N1—C5—H5 | 115.7 (5) | O8ii—Na1—O8 | 85.57 (4) |
C6—C5—H5 | 124.8 (5) | O1—Na1—O8 | 68.09 (3) |
C5—C6—C7 | 119.36 (7) | O5—Na1—O7iii | 86.41 (3) |
C5—C6—H6 | 120.0 (6) | O9—Na1—O7iii | 97.73 (5) |
C7—C6—H6 | 120.6 (6) | O8ii—Na1—O7iii | 103.97 (4) |
C6—C7—C3 | 120.87 (7) | O1—Na1—O7iii | 89.27 (3) |
C6—C7—H7 | 122.5 (4) | O8—Na1—O7iii | 157.33 (3) |
C3—C7—H7 | 116.6 (4) | H10A—O10—H10B | 103.1 (14) |
C5—N1—C4 | 122.56 (7) | Na2ii—O11—Na2 | 99.70 (6) |
C5—N1—H1 | 121.0 (5) | Na2ii—O11—H11A | 143.5 (10) |
C4—N1—H1 | 116.5 (5) | Na2—O11—H11A | 88.9 (10) |
P1—O1—Na1 | 142.77 (4) | Na2ii—O11—H11B | 112.3 (11) |
P1—O1—Na2 | 140.50 (4) | Na2—O11—H11B | 68.9 (11) |
P1—O3—H3 | 110.3 (7) | H11A—O11—H11B | 104.0 (15) |
P2—O5—Na2 | 128.60 (4) | Na2—O12—H12A | 102.4 (10) |
P2—O5—Na1 | 124.33 (4) | Na2—O12—H12B | 157.8 (12) |
P2—O6—H6A | 113.4 (8) | H12A—O12—H12B | 97.8 (16) |
C1—O7—Na2i | 129.94 (5) | O5—Na2—O11ii | 165.62 (6) |
C1—O7—Na1i | 126.56 (5) | O5—Na2—O7iii | 87.92 (4) |
C1—O7—H7A | 112.5 (6) | O11ii—Na2—O7iii | 105.13 (5) |
Na2i—O7—H7A | 100.2 (7) | O5—Na2—O12 | 85.16 (5) |
Na1i—O7—H7A | 96.7 (7) | O11ii—Na2—O12 | 98.62 (6) |
O1—P1—O2 | 115.22 (3) | O7iii—Na2—O12 | 98.33 (5) |
O1—P1—O3 | 109.48 (3) | O5—Na2—O11 | 85.52 (5) |
O2—P1—O3 | 108.64 (3) | O11ii—Na2—O11 | 80.30 (6) |
O1—P1—C1 | 110.60 (3) | O7iii—Na2—O11 | 145.36 (4) |
O2—P1—C1 | 107.55 (4) | O12—Na2—O11 | 114.90 (6) |
O3—P1—C1 | 104.82 (4) | O5—Na2—O1 | 72.66 (3) |
O4—P2—O5 | 116.22 (3) | O11ii—Na2—O1 | 102.41 (6) |
O4—P2—O6 | 109.40 (4) | O7iii—Na2—O1 | 83.32 (3) |
O5—P2—O6 | 108.86 (3) | O12—Na2—O1 | 157.71 (5) |
O4—P2—C1 | 109.07 (3) | O11—Na2—O1 | 62.26 (4) |
| | | |
O7—C1—C2—C3 | 67.23 (8) | O7—C1—P2—O4 | 177.58 (5) |
P2—C1—C2—C3 | −176.57 (5) | C2—C1—P2—O4 | 62.19 (5) |
P1—C1—C2—C3 | −53.84 (7) | P1—C1—P2—O4 | −60.22 (5) |
C1—C2—C3—C4 | −68.20 (10) | O7—C1—P2—O5 | −55.30 (5) |
C1—C2—C3—C7 | 114.33 (8) | C2—C1—P2—O5 | −170.69 (4) |
C7—C3—C4—N1 | −0.69 (12) | P1—C1—P2—O5 | 66.89 (5) |
C2—C3—C4—N1 | −178.26 (8) | O7—C1—P2—O6 | 60.57 (6) |
N1—C5—C6—C7 | 0.06 (16) | C2—C1—P2—O6 | −54.82 (5) |
C5—C6—C7—C3 | −0.48 (16) | P1—C1—P2—O6 | −177.23 (3) |
C4—C3—C7—C6 | 0.78 (13) | P2—O5—Na1—O9 | −143.08 (5) |
C2—C3—C7—C6 | 178.37 (9) | P2—O5—Na1—O8ii | −171.10 (13) |
C6—C5—N1—C4 | 0.03 (15) | P2—O5—Na1—O1 | 45.15 (4) |
C3—C4—N1—C5 | 0.30 (13) | P2—O5—Na1—O8 | 112.77 (4) |
C2—C1—O7—Na2i | 42.50 (7) | P2—O5—Na1—O7iii | −44.80 (4) |
P2—C1—O7—Na2i | −73.07 (6) | P1—O1—Na1—O5 | −7.66 (6) |
P1—C1—O7—Na2i | 164.00 (3) | P1—O1—Na1—O9 | −32.05 (17) |
C2—C1—O7—Na1i | 51.56 (6) | P1—O1—Na1—O8ii | −176.07 (5) |
P2—C1—O7—Na1i | −64.01 (6) | P1—O1—Na1—O8 | −102.33 (6) |
P1—C1—O7—Na1i | 173.06 (2) | P1—O1—Na1—O7iii | 78.83 (6) |
Na1—O1—P1—O2 | 130.44 (6) | Na1ii—O8—Na1—O5 | 162.57 (4) |
Na2—O1—P1—O2 | 132.43 (5) | Na1ii—O8—Na1—O9 | 80.19 (5) |
Na1—O1—P1—O3 | −106.79 (6) | Na1ii—O8—Na1—O8ii | 0.0 |
Na2—O1—P1—O3 | −104.80 (5) | Na1ii—O8—Na1—O1 | −119.30 (5) |
Na1—O1—P1—C1 | 8.22 (6) | Na1ii—O8—Na1—O7iii | −116.28 (10) |
Na2—O1—P1—C1 | 10.22 (6) | P2—O5—Na2—O11ii | 123.8 (2) |
O7—C1—P1—O1 | 88.82 (5) | P2—O5—Na2—O7iii | −31.73 (5) |
C2—C1—P1—O1 | −152.20 (5) | P2—O5—Na2—O12 | −130.28 (5) |
P2—C1—P1—O1 | −32.06 (5) | P2—O5—Na2—O11 | 114.23 (5) |
O7—C1—P1—O2 | −37.78 (5) | P2—O5—Na2—O1 | 51.92 (4) |
C2—C1—P1—O2 | 81.20 (5) | Na2ii—O11—Na2—O5 | 177.61 (6) |
P2—C1—P1—O2 | −158.66 (3) | Na2ii—O11—Na2—O11ii | 0.0 |
O7—C1—P1—O3 | −153.28 (4) | Na2ii—O11—Na2—O7iii | −102.61 (9) |
C2—C1—P1—O3 | −34.29 (5) | Na2ii—O11—Na2—O12 | 95.06 (7) |
P2—C1—P1—O3 | 85.84 (4) | Na2ii—O11—Na2—O1 | −109.65 (7) |
Na2—O5—P2—O4 | 32.91 (6) | P1—O1—Na2—O5 | −10.68 (6) |
Na1—O5—P2—O4 | 42.29 (5) | P1—O1—Na2—O11ii | −176.69 (6) |
Na2—O5—P2—O6 | 156.94 (4) | P1—O1—Na2—O7iii | 79.23 (6) |
Na1—O5—P2—O6 | 166.32 (3) | P1—O1—Na2—O12 | −16.46 (15) |
Na2—O5—P2—C1 | −89.94 (5) | P1—O1—Na2—O11 | −104.79 (7) |
Na1—O5—P2—C1 | −80.56 (4) | | |
Symmetry codes: (i) −x+1/2, y−1/2, −z+1/2; (ii) −x+1/2, −y+1/2, −z+1; (iii) −x+1/2, y+1/2, −z+1/2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2iv | 0.880 (9) | 1.765 (9) | 2.6440 (11) | 177.7 (8) |
O3—H3···O5iii | 0.765 (9) | 1.745 (9) | 2.5002 (8) | 168.9 (9) |
O6—H6A···O1i | 0.736 (9) | 1.922 (9) | 2.6538 (10) | 172.5 (9) |
O7—H7A···O4i | 0.827 (9) | 1.954 (9) | 2.7487 (10) | 161.0 (9) |
O8—H8B···O4i | 0.85 (1) | 1.96 (1) | 2.7671 (13) | 160 (2) |
O8—H8A···O1 | 0.87 (1) | 2.11 (2) | 2.7339 (13) | 129 (1) |
O9—H9A···O3i | 0.82 (1) | 2.25 (1) | 2.9671 (15) | 145 (1) |
O9—H9B···O10v | 0.83 (1) | 2.01 (1) | 2.7596 (16) | 149 (2) |
O10—H10A···O2 | 0.84 (1) | 1.88 (1) | 2.6914 (15) | 162 (2) |
O10—H10B···O2vi | 0.85 (1) | 2.08 (1) | 2.9097 (15) | 166 (1) |
O11—H11A···O4i | 0.84 (1) | 2.02 (1) | 2.7575 (18) | 146 (1) |
O11—H11B···O1 | 0.86 (1) | 1.95 (1) | 2.7972 (17) | 169 (2) |
O12—H12A···O3i | 0.87 (1) | 2.13 (1) | 2.9219 (15) | 152 (2) |
O12—H12B···O2v | 0.85 (1) | 2.17 (1) | 2.9804 (15) | 161 (2) |
Symmetry codes: (i) −x+1/2, y−1/2, −z+1/2; (iii) −x+1/2, y+1/2, −z+1/2; (iv) −x, −y, −z; (v) x+1/2, −y+1/2, z+1/2; (vi) −x, y, −z+1/2. |
Experimental details
| (I) | (II) | (III) |
Crystal data |
Chemical formula | C7H11NO7P2·H2O | [Na(C7H10NO7P2)]·2H2O | [Na(C7H10NO7P2)]·2.5H2O |
Mr | 301.12 | 341.12 | 350.13 |
Crystal system, space group | Monoclinic, P21/n | Triclinic, P1 | Monoclinic, C2/c |
Temperature (K) | 193 | 193 | 193 |
a, b, c (Å) | 7.1219 (15), 10.694 (2), 14.710 (3) | 7.663 (4), 8.039 (4), 10.770 (5) | 21.664 (7), 8.930 (3), 15.123 (5) |
α, β, γ (°) | 90, 101.996 (4), 90 | 93.655 (8), 95.277 (9), 96.017 (8) | 90, 114.692 (5), 90 |
V (Å3) | 1095.9 (4) | 655.2 (6) | 2658.3 (14) |
Z | 4 | 2 | 8 |
Radiation type | Mo Kα | Mo Kα | Mo Kα |
µ (mm−1) | 0.43 | 0.41 | 0.41 |
Crystal size (mm) | 0.15 × 0.08 × 0.02 | 0.20 × 0.16 × 0.06 | 0.30 × 0.20 × 0.06 |
|
Data collection |
Diffractometer | Bruker Platform CCD area-detector diffractometer | Bruker Platform CCD area-detector diffractometer | Bruker Platform CCD area-detector diffractometer |
Absorption correction | Integration (XPREP in SHELXTL; Bruker, 2001) | Integration (XPREP in SHELXTL; Bruker, 2001) | Integration (XPREP in SHELXTL; Bruker, 2001) |
Tmin, Tmax | 0.936, 0.991 | 0.935, 0.976 | 0.886, 0.977 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8978, 2236, 1534 | 4297, 2586, 2007 | 13009, 2435, 2142 |
Rint | 0.079 | 0.027 | 0.035 |
(sin θ/λ)max (Å−1) | 0.625 | 0.623 | 0.604 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.108, 1.01 | 0.040, 0.100, 1.02 | 0.030, 0.082, 1.05 |
No. of reflections | 2236 | 2586 | 2435 |
No. of parameters | 200 | 237 | 298 |
No. of restraints | 20 | 10 | 33 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | All H-atom parameters refined | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.46, −0.37 | 0.50, −0.31 | 0.37, −0.35 |
Selected geometric parameters (Å, º) for (I) topO1—P1 | 1.548 (2) | O4—P2 | 1.479 (2) |
O2—P1 | 1.524 (2) | O5—P2 | 1.555 (2) |
O3—P1 | 1.494 (2) | O6—P2 | 1.562 (2) |
| | | |
P1—C1—P2 | 113.20 (15) | C1—C2—C3 | 117.6 (2) |
| | | |
P1—C1—C2—C3 | 57.6 (3) | C1—C2—C3—C4 | 82.9 (4) |
Hydrogen-bond geometry (Å, º) for (I) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2i | 0.91 (3) | 1.94 (4) | 2.847 (4) | 172 (3) |
O1—H1A···O8ii | 0.84 (3) | 1.66 (4) | 2.496 (6) | 172 (4) |
O1—H1A···O9ii | 0.84 (3) | 1.61 (4) | 2.355 (18) | 147 (4) |
O5—H5A···O2iii | 0.80 (4) | 1.84 (4) | 2.634 (3) | 174 (4) |
O6—H6A···O2iv | 0.76 (4) | 1.91 (4) | 2.661 (3) | 172 (4) |
O7—H7A···O3v | 0.78 (3) | 1.96 (4) | 2.730 (3) | 168 (3) |
O8—H8A···O3v | 0.84 (3) | 1.87 (3) | 2.704 (5) | 170 (5) |
O8—H8B···O4vi | 0.85 (3) | 1.83 (3) | 2.675 (5) | 174 (5) |
Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) x+1, y, z; (iii) −x+2, −y+2, −z+2; (iv) x−1, y, z; (v) −x+3/2, y−1/2, −z+3/2; (vi) −x+1/2, y−1/2, −z+3/2. |
Selected geometric parameters (Å, º) for (II) topO1—P1 | 1.5134 (19) | O4—P2 | 1.515 (2) |
O2—P1 | 1.514 (2) | O5—P2 | 1.495 (2) |
O3—P1 | 1.579 (2) | O6—P2 | 1.600 (2) |
| | | |
P1—C1—P2 | 113.21 (14) | C3—C2—C1 | 114.8 (2) |
| | | |
P2—C1—C2—C3 | 61.8 (3) | C1—C2—C3—C4 | −97.2 (3) |
Hydrogen-bond geometry (Å, º) for (II) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···O2i | 0.79 (3) | 1.82 (3) | 2.613 (3) | 177 (4) |
N1—H1···O4ii | 0.97 (4) | 1.63 (4) | 2.592 (3) | 173 (3) |
O6—H6A···O9 | 0.80 (3) | 1.86 (3) | 2.656 (3) | 178 (4) |
O7—H7A···O1iii | 0.81 (3) | 2.00 (3) | 2.791 (3) | 166 (3) |
O8—H8A···O1iv | 0.89 (3) | 2.03 (3) | 2.902 (3) | 165 (3) |
O8—H8A···O3iv | 0.89 (3) | 2.63 (4) | 3.124 (3) | 116 (3) |
O8—H8B···O4i | 0.93 (3) | 2.25 (4) | 2.797 (3) | 116 (4) |
O8—H8B···O3i | 0.93 (3) | 2.55 (4) | 3.283 (3) | 136 (4) |
O9—H9A···O8iii | 0.90 (3) | 1.81 (3) | 2.696 (3) | 165 (5) |
O9—H9B···O6v | 0.84 (3) | 2.13 (3) | 2.914 (3) | 156 (4) |
Symmetry codes: (i) −x+1, −y, −z+2; (ii) −x, −y, −z+1; (iii) −x+1, −y+1, −z+2; (iv) x+1, y, z; (v) −x, −y+1, −z+1. |
Selected geometric parameters (Å, º) for (III) topO1—P1 | 1.5098 (6) | O4—P2 | 1.4983 (7) |
O2—P1 | 1.5104 (7) | O5—P2 | 1.5089 (7) |
O3—P1 | 1.5657 (6) | O6—P2 | 1.5808 (6) |
| | | |
P2—C1—P1 | 111.84 (4) | C3—C2—C1 | 116.69 (7) |
| | | |
P1—C1—C2—C3 | −53.84 (7) | C1—C2—C3—C4 | −68.20 (10) |
Hydrogen-bond geometry (Å, º) for (III) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2i | 0.880 (9) | 1.765 (9) | 2.6440 (11) | 177.7 (8) |
O3—H3···O5ii | 0.765 (9) | 1.745 (9) | 2.5002 (8) | 168.9 (9) |
O6—H6A···O1iii | 0.736 (9) | 1.922 (9) | 2.6538 (10) | 172.5 (9) |
O7—H7A···O4iii | 0.827 (9) | 1.954 (9) | 2.7487 (10) | 161.0 (9) |
O8—H8B···O4iii | 0.846 (11) | 1.957 (13) | 2.7671 (13) | 160.1 (17) |
O8—H8A···O1 | 0.868 (11) | 2.106 (15) | 2.7339 (13) | 128.7 (14) |
O9—H9A···O3iii | 0.822 (13) | 2.253 (12) | 2.9671 (15) | 145.4 (11) |
O9—H9B···O10iv | 0.832 (10) | 2.013 (11) | 2.7596 (16) | 149.1 (17) |
O10—H10A···O2 | 0.841 (13) | 1.879 (14) | 2.6914 (15) | 161.9 (15) |
O10—H10B···O2v | 0.848 (13) | 2.081 (14) | 2.9097 (15) | 165.5 (11) |
O11—H11A···O4iii | 0.841 (14) | 2.017 (13) | 2.7575 (18) | 146.4 (11) |
O11—H11B···O1 | 0.863 (12) | 1.946 (13) | 2.7972 (17) | 168.6 (16) |
O12—H12A···O3iii | 0.867 (14) | 2.130 (12) | 2.9219 (15) | 151.7 (17) |
O12—H12B···O2iv | 0.845 (11) | 2.167 (11) | 2.9804 (15) | 161.4 (17) |
Symmetry codes: (i) −x, −y, −z; (ii) −x+1/2, y+1/2, −z+1/2; (iii) −x+1/2, y−1/2, −z+1/2; (iv) x+1/2, −y+1/2, z+1/2; (v) −x, y, −z+1/2. |
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Risedronate (Actonel; Procter & Gamble) is a potent inhibitor of osteoclast-mediated bone resorption and has found widespread use in the treatment of osteoporosis. More recently, risedronate has also been shown to have antiparasitic properties, in particular against the organisms which cause sleeping sickness, Chagas' disease, leishmanasis, toxoplasmosis and cryptosporidiosis (Martin et al., 2001; Urbina et al., 1999; Moreno et al., 2001). With the knowledge that several million people contract these diseases worldwide each year, it is of interest to explore the structural origins of bisphosphonate activity against these parasites. Only one structural form for risedronate, one of the most potent antiparasitic and antiresorptive agents, has been published to date (Barbey & Lecouvey, 2002). Here, the structures of three different forms of risedronate, (I), (II) and (III), are reported. \sch
All three hydrates exist as zwitterions, a common characteristic of bisphosphonates (Vega et al., 1996, 1998). The monohydrate, (I) (Fig. 1), has an overall charge of zero, with one positively charged N atom and one negatively charged phosphonate group (Barbey & Lecouvey, 2002). The dihydrate, (II) (Fig. 2), and the 2.5-hydrate, (III) (Fig. 3), both have an overall charge of −1, again with a positively charged N atom but with two negatively charged phosphonates. These protonation states are correlated with the P—O bond lengths.
Fig. 4 shows a histogram of the P—O bond distances observed in these three hydrates, along with those in two other bisphosphonate structures (isozoledronate and incadronate) recently explored (Gossman et al., 2002; Van Brussel et al., 2003), together with values found in 62 three-dimensional X-ray crystal structures of similar phosphonate-containing compounds that are listed in the Cambridge Structural Database (Version?; Allen, 2002). The two histograms are very similar, and show a clear bimodal distribution. P—O bonds in which the O atom is unprotonated are between 1.47 and 1.53 Å long, but this increases to 1.54–1.60 Å if the O atom is protonated.
Using this description to inspect the P—O bond lengths in the three hydrates studied here, compound (I), with P1—O1 1.548 (2), P1—O2 1.524 (2) and P1—O3 1.494 (2) Å, and P2—O4 1.480 (2), P2—O5 1.555 (2) and P2—O6 1.562 (2) Å, shows three protonated O atoms on the phosphonate groups, namely O1, O5 and O6, and three unprotonated O atoms, namely O2, O3, and O4, leading to the conclusion that atom P1 is negatively charged, while atom P2 is neutral. Inspection of (II), with P1—O1 1.513 (2), P1—O2 1.514 (2) and P1—O3 1.579 (2) Å, and P2—O4 1.515 (2), P2—O5 1.495 (2) and P2—O6 1.600 (2) Å, results in only two protonated O atoms, namely O3 and O6, and four unprotonated, namely O1, O2, O4 and O5, showing that both phosphonate groups in (II) carry a −1 charge, unlike (I). Analysis of (III), with P1—O1 1.510 (1), P1—O2 1.510 (1) and P1—O3 1.566 (1) Å, and P2—O4 1.498 (1), P2—O5 1.509 (1) and P2—O6 1.581 (1) Å, shows that the phosphonate groups have the same protonation state as in (II).
The conformation of risedronate in all three of these hydrates is very similar. The P1—C1—P2 angles are nearly identical [113.2 (2), 113.2 (2) and 111.8 (1)° in (I), (II) and (III), respectively], and the P1—C1—C2—C3 torsion angles between the phosphonate group and the ring are also similar [57.6 (3), 61.8 (3) and 53.8 (1)° in (I), (II) and (III), respectively]. One noticeable difference found in the structures is a nearly 180° rotation of the ring in the dihydrate compared with the mono- and 2.5-hydrates, as reflected in the C1—C2—C3—C4 torsion angles of the C atom closest to the N atom [82.9 (4), −97.2 (3) and 68.2 (1)° in (I), (II) and (III), respectively].
The main distinguishing structural feature between these three hydrates lies in ion aggregate propagation. In the monohydrate, only the hydrogen-bonding network interconnects the host bisphosphonate molecules, forming the crystals of (I). In the dihydrate, (II), atoms O1, O5 and O7 coordinate to Na1, atom O5 coordinates to a site on an inversion related Na1, and atom O2 bridges another Na1 through a different inversion centre. The ion aggregate propagates along the a axis. In the 2.5-hydrate, (III), atoms O1 and O5 coordinate to Na1, atom O7 coordinates to the terminal site on a c-glide related Na atom, and water ligand O8 bridges two Na atoms related by an inversion centre. The ion aggregate propagates parallel to the b,c plane. All three conformations show an extensive hydrogen-bonding network, with each structure having at least ten hydrogen bonds.