Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270104021122/gd1344sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270104021122/gd1344Isup2.hkl |
CCDC reference: 254954
4-Nitroaniline was dissolved in 10% aqueous nitric acid; after several days, colourless single crystals formed, which proved to be suitable for single-crystal X-ray diffraction.
All H atoms were treated as riding atoms, with C—H distances of 0.93 Å and N—H distances of 0.89 Å, and with Uiso(H) = 1.2 Ueq(C) and 1.3 Ueq(N).
Data collection: KM-4 Software (Kuma, 2001; cell refinement: KM-4 Sfotware; data reduction: KM-4 Software; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Sheldrick, 1990); software used to prepare material for publication: SHELXL97.
C6H7N2O2+·NO3− | F(000) = 416 |
Mr = 201.15 | Dx = 1.568 Mg m−3 Dm = 1.56 Mg m−3 Dm measured by floatation in a mixture of CHCl3/CHBr3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 1950 reflections |
a = 5.644 (1) Å | θ = 2.9–29° |
b = 9.682 (2) Å | µ = 0.14 mm−1 |
c = 15.662 (3) Å | T = 293 K |
β = 95.23 (2)° | Parallelepiped, pink |
V = 852.3 (3) Å3 | 0.37 × 0.28 × 0.22 mm |
Z = 4 |
Kuma KM-4 CCD area-detector diffractometer | 2254 independent reflections |
Radiation source: fine-focus sealed tube | 1950 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.014 |
Detector resolution: 1024x1024 with blocks 2x2 pixels mm-1 | θmax = 29.0°, θmin = 3.4° |
ω–scan | h = −7→7 |
Absorption correction: analytical face-indexed (SHELXTL; Sheldrick, 1990) | k = −13→13 |
Tmin = 0.941, Tmax = 0.958 | l = −20→20 |
11065 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.041 | H-atom parameters constrained |
wR(F2) = 0.113 | w = 1/[σ2(Fo2) + (0.0691P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.00 | (Δ/σ)max < 0.001 |
2254 reflections | Δρmax = 0.18 e Å−3 |
129 parameters | Δρmin = −0.16 e Å−3 |
0 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.032 (5) |
C6H7N2O2+·NO3− | V = 852.3 (3) Å3 |
Mr = 201.15 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 5.644 (1) Å | µ = 0.14 mm−1 |
b = 9.682 (2) Å | T = 293 K |
c = 15.662 (3) Å | 0.37 × 0.28 × 0.22 mm |
β = 95.23 (2)° |
Kuma KM-4 CCD area-detector diffractometer | 2254 independent reflections |
Absorption correction: analytical face-indexed (SHELXTL; Sheldrick, 1990) | 1950 reflections with I > 2σ(I) |
Tmin = 0.941, Tmax = 0.958 | Rint = 0.014 |
11065 measured reflections |
R[F2 > 2σ(F2)] = 0.041 | 0 restraints |
wR(F2) = 0.113 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.18 e Å−3 |
2254 reflections | Δρmin = −0.16 e Å−3 |
129 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.57973 (17) | 0.07943 (10) | 0.18706 (6) | 0.0483 (3) | |
H1N | 0.6949 | 0.0163 | 0.1909 | 0.063* | |
H2N | 0.4390 | 0.0375 | 0.1849 | 0.063* | |
H3N | 0.5965 | 0.1345 | 0.2327 | 0.063* | |
C1 | 0.59408 (18) | 0.16131 (11) | 0.10951 (7) | 0.0417 (3) | |
C2 | 0.4091 (2) | 0.15860 (13) | 0.04584 (7) | 0.0524 (3) | |
H2 | 0.2780 | 0.1021 | 0.0511 | 0.063* | |
C3 | 0.4197 (2) | 0.24044 (14) | −0.02582 (7) | 0.0549 (3) | |
H3 | 0.2957 | 0.2405 | −0.0692 | 0.066* | |
C4 | 0.6166 (2) | 0.32171 (11) | −0.03186 (7) | 0.0453 (3) | |
C5 | 0.8028 (2) | 0.32354 (13) | 0.03094 (8) | 0.0539 (3) | |
H5 | 0.9358 | 0.3782 | 0.0251 | 0.065* | |
C6 | 0.7892 (2) | 0.24293 (13) | 0.10276 (8) | 0.0523 (3) | |
H6 | 0.9122 | 0.2440 | 0.1465 | 0.063* | |
N2 | 0.6261 (2) | 0.41095 (11) | −0.10746 (7) | 0.0574 (3) | |
O21 | 0.4425 (2) | 0.43157 (11) | −0.15285 (6) | 0.0750 (3) | |
O22 | 0.8194 (2) | 0.46025 (14) | −0.12143 (7) | 0.0914 (4) | |
N3 | 0.41754 (17) | 0.36708 (10) | 0.29761 (6) | 0.0460 (3) | |
O1 | 0.62221 (14) | 0.32257 (9) | 0.28949 (5) | 0.0580 (3) | |
O2 | 0.24146 (16) | 0.30365 (10) | 0.26838 (7) | 0.0599 (3) | |
O3 | 0.39947 (18) | 0.47839 (10) | 0.33559 (7) | 0.0577 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0503 (5) | 0.0495 (6) | 0.0440 (5) | 0.0070 (4) | −0.0009 (4) | 0.0007 (4) |
C1 | 0.0398 (5) | 0.0440 (6) | 0.0408 (6) | 0.0040 (4) | 0.0015 (4) | −0.0053 (4) |
C2 | 0.0426 (6) | 0.0671 (8) | 0.0463 (6) | −0.0107 (5) | −0.0028 (5) | 0.0043 (5) |
C3 | 0.0464 (6) | 0.0733 (8) | 0.0428 (6) | −0.0071 (6) | −0.0069 (5) | 0.0025 (6) |
C4 | 0.0497 (6) | 0.0453 (6) | 0.0407 (6) | −0.0009 (5) | 0.0028 (5) | −0.0038 (4) |
C5 | 0.0496 (6) | 0.0516 (7) | 0.0593 (7) | −0.0128 (5) | −0.0020 (5) | −0.0007 (5) |
C6 | 0.0437 (6) | 0.0577 (7) | 0.0529 (7) | −0.0041 (5) | −0.0088 (5) | −0.0015 (5) |
N2 | 0.0782 (8) | 0.0494 (6) | 0.0447 (6) | −0.0094 (5) | 0.0059 (5) | −0.0016 (4) |
O21 | 0.0889 (7) | 0.0741 (7) | 0.0600 (6) | 0.0085 (5) | −0.0042 (5) | 0.0112 (5) |
O22 | 0.1047 (9) | 0.1016 (9) | 0.0669 (7) | −0.0538 (7) | 0.0034 (6) | 0.0118 (6) |
N3 | 0.0485 (5) | 0.0435 (5) | 0.0454 (5) | −0.0014 (4) | 0.0005 (4) | 0.0035 (4) |
O1 | 0.0499 (5) | 0.0647 (6) | 0.0581 (5) | 0.0124 (4) | −0.0013 (4) | −0.0060 (4) |
O2 | 0.0523 (6) | 0.0535 (6) | 0.0698 (8) | −0.0190 (4) | −0.0161 (5) | 0.0105 (5) |
O3 | 0.0603 (7) | 0.0484 (6) | 0.0651 (7) | 0.0082 (5) | 0.0111 (5) | −0.0234 (5) |
N1—C1 | 1.4590 (14) | C4—C5 | 1.3726 (16) |
N1—H1N | 0.8900 | C4—N2 | 1.4707 (15) |
N1—H2N | 0.8900 | C5—C6 | 1.3770 (17) |
N1—H3N | 0.8900 | C5—H5 | 0.9300 |
C1—C6 | 1.3672 (16) | C6—H6 | 0.9300 |
C1—C2 | 1.3766 (15) | N2—O21 | 1.2182 (14) |
C2—C3 | 1.3797 (16) | N2—O22 | 1.2287 (14) |
C2—H2 | 0.9300 | N3—O2 | 1.2212 (12) |
C3—C4 | 1.3719 (16) | N3—O3 | 1.2396 (13) |
C3—H3 | 0.9300 | N3—O1 | 1.2502 (12) |
C1—N1—H1N | 109.5 | C3—C4—C5 | 122.02 (10) |
C1—N1—H2N | 109.5 | C3—C4—N2 | 118.78 (10) |
H1N—N1—H2N | 109.5 | C5—C4—N2 | 119.19 (10) |
C1—N1—H3N | 109.5 | C4—C5—C6 | 118.81 (10) |
H1N—N1—H3N | 109.5 | C4—C5—H5 | 120.6 |
H2N—N1—H3N | 109.5 | C6—C5—H5 | 120.6 |
C6—C1—C2 | 121.19 (10) | C1—C6—C5 | 119.75 (10) |
C6—C1—N1 | 118.99 (10) | C1—C6—H6 | 120.1 |
C2—C1—N1 | 119.78 (10) | C5—C6—H6 | 120.1 |
C1—C2—C3 | 119.48 (11) | O21—N2—O22 | 123.65 (11) |
C1—C2—H2 | 120.3 | O21—N2—C4 | 118.35 (11) |
C3—C2—H2 | 120.3 | O22—N2—C4 | 118.00 (12) |
C4—C3—C2 | 118.74 (10) | O2—N3—O3 | 121.15 (11) |
C4—C3—H3 | 120.6 | O2—N3—O1 | 121.09 (10) |
C2—C3—H3 | 120.6 | O3—N3—O1 | 117.75 (10) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H3N···O1 | 0.89 | 2.03 | 2.8465 (13) | 153 |
N1—H1N···O1i | 0.89 | 2.15 | 3.0061 (13) | 161 |
N1—H1N···O3i | 0.89 | 2.39 | 3.1485 (15) | 143 |
N1—H2N···O3ii | 0.89 | 1.99 | 2.8676 (14) | 168 |
Symmetry codes: (i) −x+3/2, y−1/2, −z+1/2; (ii) −x+1/2, y−1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C6H7N2O2+·NO3− |
Mr | 201.15 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 5.644 (1), 9.682 (2), 15.662 (3) |
β (°) | 95.23 (2) |
V (Å3) | 852.3 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.14 |
Crystal size (mm) | 0.37 × 0.28 × 0.22 |
Data collection | |
Diffractometer | Kuma KM-4 CCD area-detector diffractometer |
Absorption correction | Analytical face-indexed (SHELXTL; Sheldrick, 1990) |
Tmin, Tmax | 0.941, 0.958 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11065, 2254, 1950 |
Rint | 0.014 |
(sin θ/λ)max (Å−1) | 0.682 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.041, 0.113, 1.00 |
No. of reflections | 2254 |
No. of parameters | 129 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.18, −0.16 |
Computer programs: KM-4 Software (Kuma, 2001, KM-4 Sfotware, KM-4 Software, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Sheldrick, 1990), SHELXL97.
N1—C1 | 1.4590 (14) | C5—C6 | 1.3770 (17) |
C1—C6 | 1.3672 (16) | N2—O21 | 1.2182 (14) |
C1—C2 | 1.3766 (15) | N2—O22 | 1.2287 (14) |
C2—C3 | 1.3797 (16) | N3—O2 | 1.2212 (12) |
C3—C4 | 1.3719 (16) | N3—O3 | 1.2396 (13) |
C4—C5 | 1.3726 (16) | N3—O1 | 1.2502 (12) |
C4—N2 | 1.4707 (15) | ||
C6—C1—C2 | 121.19 (10) | C1—C6—C5 | 119.75 (10) |
C1—C2—C3 | 119.48 (11) | O21—N2—O22 | 123.65 (11) |
C4—C3—C2 | 118.74 (10) | O2—N3—O3 | 121.15 (11) |
C3—C4—C5 | 122.02 (10) | O2—N3—O1 | 121.09 (10) |
C4—C5—C6 | 118.81 (10) | O3—N3—O1 | 117.75 (10) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H3N···O1 | 0.89 | 2.03 | 2.8465 (13) | 152.8 |
N1—H1N···O1i | 0.89 | 2.15 | 3.0061 (13) | 161.2 |
N1—H1N···O3i | 0.89 | 2.39 | 3.1485 (15) | 143.0 |
N1—H2N···O3ii | 0.89 | 1.99 | 2.8676 (14) | 167.6 |
Symmetry codes: (i) −x+3/2, y−1/2, −z+1/2; (ii) −x+1/2, y−1/2, −z+1/2. |
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The present study is a continuation of our investigations characterizing the hydrogen-bonding system formed by self-assembly of components containing complementary arrays of hydrogen-bonding sites (Janczak & Perpétuo, 2004, and references therein; Desiraju, 1990; Krische & Lehn, 2000; Sherington & Taskinen, 2001). To expand our understanding of the solid-state physical-organic chemistry of compounds containing N—H···O hydrogen-bonding systems, we present here the solid-state structure of p-nitroanilinium mitrate, (I), and compare the results with that predicted for isolated oppositely charged parts of the crystal of (I), i.e. the 4-nitroanilinium cation and the nitrate anion, by ab-initio fully optimized geometry calculation at the HF/6–31 G(d,p) level (Frisch et al., 1998). The molecular orbital calculations were carried out on isolated ions corresponding to the gas phase, and the results are shown in Fig. 1.
As revealed by X-ray structure analysis, the nitro group is coplanar with the aryl ring, which shows significant distortions from the ideal C6 h symmetry (Table 1). The C—C bond lengths within the ring are consistent with those found in other molecules of this type (Allen, 2002). The two internal C—C—C angles in the ring at the substituted atoms C1 and C4 are greater than 120°, while the other four C—C—C angles within the ring are smaller than 120°. These angular differences have been attributed to the substitution effect of the NH3+ and NO2 groups in the ring, respectively, at the 1- and 4-positions. The optimized geometry of the 4-nitroanilinium cation shows values similar to those found in the crystal, but the variation of the internal C—C—C angles is more pronounced. The calculated C—Namine bond length is greater than the X-ray value, while the calculated C—Nnitro bond is slightly less than the X-ray value. The O—N—O angle in the NO2 group is significantly greater than 120° as a result of the steric effect of the lone-pair of electrons on both O atoms that is predicted by the valence-shell electron-pair repulsion theory (Gillespie, 1963, 1992). The steric effect of the lone-pair of electrons is further evidenced in the ab-initio fully optimized geometry. The X-ray geometry of the nitrate anion shows significant distortion from the D3 h symmetry obtained by molecular orbital calculations (the three N—O bonds in the isolated NO3− ion are equivalent, with a distance of 1.226 Å).
The N—O bonds in the nitro group are slightly shorter than those in the anion. These values indicate a bond order of 2 in the nitro group, while in the NO3− anion the bond order is smaller than 2 because of the delocalization of the two π bonds over three N—O bonds. The experimental and calculated N—O bond lengths in the nitro group are comparable, since in the crystal the nitro O atoms do not form any hydrogen bonds. Two of the N—O bonds of the anion (to atoms O1 and O3) are longer in the crystal than calculated for the gas phase, since they are involved as acceptors in two hydrogen bonds. The third N—O bond length (to atom O2) is similar as calculated from both X-ray and ab-inito methods, since atom O2 does not form hydrogen bonds (Fig. 3).
In the crystal of (I), the oppositely charged 4-nitroanilinum cations and nitrate anions related by a 21 screw axis interact via N—H···O hydrogen bonds, forming chains parallel to [010] (Fig. 4) in which the 4-nitroanilinium cations resemble the branches of fir trees. The cations of adjacent chains related by inversion are interdigitated, with parallel rings. The hydrogen-bonding interactions are responsible for the relatively high density of the crystal.