Eight novel Schiff bases derived from benzil dihydrazone (BDH) or benzil monohydrazone (BMH) and four fused-ring carbonyl compounds (3-formylindole, FI; 3-acetylindole, AI; 3-formyl-1-methylindole, MFI; 1-formylnaphthalene, FN) were synthesized and characterized by elemental analysis, ESI–QTOF–MS, 1H and 13C NMR spectroscopy, as well as single-crystal X-ray diffraction. They are (1Z,2Z)-1,2-bis{(E)-[(1H-indol-3-yl)methylidene]hydrazinylidene}-1,2-diphenylethane (BDHFI), C32H24N6, (1Z,2Z)-1,2-bis{(E)-[1-(1H-indol-3-yl)ethylidene]hydrazinylidene}-1,2-diphenylethane (BDHAI), C34H28N6, (1Z,2Z)-1,2-bis{(E)-[(1-methyl-1H-indol-3-yl)methylidene]hydrazinylidene}-1,2-diphenylethane (BMHMFI) acetonitrile hemisolvate, C34H28N6·0.5CH3CN, (1Z,2Z)-1,2-bis{(E)-[(naphthalen-1-yl)methylidene]hydrazinylidene}-1,2-diphenylethane (BDHFN), C36H26N4, (Z)-2-{(E)-[(1H-indol-3-yl)methylidene]hydrazinylidene}-1,2-diphenylethanone (BMHFI), C23H17N3O, (Z)-2-{(E)-[1-(1H-indol-3-yl)ethylidene]hydrazinylidene}-1,2-diphenylethanone (BMHAI), C24H19N3O, (Z)-2-{(E)-[(1-methyl-1H-indol-3-yl)methylidene]hydrazinylidene}-1,2-diphenylethanone (BMHMFI), C24H19N3O, and (Z)-2-{(E)-[(naphthalen-1-yl)methylidene]hydrazinylidene}-1,2-diphenylethanone (BMHFN) C25H18N2O. Moreover, the in vitro cytotoxicity of the eight title compounds was evaluated against two tumour cell lines (A549 human lung cancer and 4T1 mouse breast cancer) and two normal cell lines (MRC-5 normal lung cells and NIH 3T3 fibroblasts) by MTT assay. The results indicate that four (BDHMFI, BDHFN, BMHMFI and BMHFN) are inactive and the other four (BDHFI, BDHAI, BMHFI and BMHAI) show severe toxicities against human A549 and mouse 4T1 cells, similar to the standard cisplatin. All the compounds exhibited weaker cytotoxicity against normal cells than cancer cells. The Swiss Target Prediction web server was applied for the prediction of protein targets. After analyzing the differences in frequency hits between these active and inactive Schiff bases, 18 probable targets were selected for reverse docking with the Surflex-dock function in SYBYL-X 2.0 software. Three target proteins, i.e. human ether-á-go-go-related (hERG) potassium channel, the inhibitor of apoptosis protein 3 and serine/threonine-protein kinase PIM1, were chosen as the targets. Finally, the ligand-based structure–activity relationships were analyzed based on the putative protein target (hERG) docking results, which will be used to design and synthesize novel hERG ion channel inhibitors.
Supporting information
CCDC references: 1966764; 1966763; 1966762; 1966761; 1966760; 1966759; 1966758; 1018144
For all structures, data collection: SMART (Bruker, 2000); cell refinement: SMART (Bruker, 2000); data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXS2016 (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2016 (Sheldrick, 2015b); molecular graphics: SHELXTL (Bruker, 2000), PLATON (Spek, 2009) and DIAMOND (Brandenburg & Putz, 1999); software used to prepare material for publication: SHELXL2016 (Sheldrick, 2015b) and WinGX (Farrugia, 2012).
(1
Z,2
Z)-1,2-Bis{(
E)-[(1
H-indol-3-yl)methylidene]hydrazinylidene}-1,2-diphenylethane (1-BDHFI)
top
Crystal data top
C32H24N6 | F(000) = 1032 |
Mr = 492.57 | Dx = 1.244 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 13.023 (4) Å | Cell parameters from 380 reflections |
b = 7.340 (2) Å | θ = 2.5–26.0° |
c = 27.762 (9) Å | µ = 0.08 mm−1 |
β = 97.693 (5)° | T = 293 K |
V = 2630.0 (14) Å3 | Block, yellow |
Z = 4 | 0.30 × 0.18 × 0.15 mm |
Data collection top
Bruker SMART CCD area detector diffractometer | 5145 independent reflections |
Radiation source: fine-focus sealed tube | 2852 reflections with I > 2σ(I) |
Detector resolution: 10.13 pixels mm-1 | Rint = 0.046 |
phi and ω scans | θmax = 26.0°, θmin = 1.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −16→13 |
Tmin = 0.903, Tmax = 0.939 | k = −8→9 |
13632 measured reflections | l = −33→34 |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.049 | Only H-atom displacement parameters refined |
wR(F2) = 0.103 | w = 1/[σ2(Fo2) + (0.0408P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.88 | (Δ/σ)max < 0.001 |
5145 reflections | Δρmax = 0.15 e Å−3 |
367 parameters | Δρmin = −0.22 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and
goodness of fit S are based on F2, conventional R-factors R are based
on F, with F set to zero for negative F2. The threshold expression of
F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is
not relevant to the choice of reflections for refinement. R-factors based
on F2 are statistically about twice as large as those based on F, and R-
factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.83514 (13) | 0.3197 (2) | 0.09431 (6) | 0.0363 (4) | |
C2 | 0.92588 (13) | 0.2300 (2) | 0.07841 (6) | 0.0378 (5) | |
C3 | 0.94898 (15) | 0.0495 (3) | 0.08906 (7) | 0.0474 (5) | |
H3 | 0.904843 | −0.018427 | 0.105749 | 0.060 (6)* | |
C4 | 1.03531 (16) | −0.0314 (3) | 0.07558 (8) | 0.0600 (6) | |
H4 | 1.049033 | −0.153332 | 0.082980 | 0.069 (7)* | |
C5 | 1.10143 (19) | 0.0661 (3) | 0.05130 (8) | 0.0713 (7) | |
H5 | 1.160256 | 0.011204 | 0.042183 | 0.084 (8)* | |
C6 | 1.08036 (19) | 0.2454 (4) | 0.04047 (9) | 0.0768 (7) | |
H6 | 1.125208 | 0.312545 | 0.023980 | 0.089 (8)* | |
C7 | 0.99353 (16) | 0.3268 (3) | 0.05380 (7) | 0.0592 (6) | |
H7 | 0.980068 | 0.448615 | 0.046176 | 0.051 (6)* | |
C8 | 0.82392 (13) | 0.5230 (2) | 0.08899 (6) | 0.0377 (4) | |
C9 | 0.74742 (14) | 0.5987 (3) | 0.05028 (7) | 0.0437 (5) | |
C10 | 0.70293 (18) | 0.4886 (4) | 0.01317 (8) | 0.0734 (7) | |
H10 | 0.720298 | 0.365746 | 0.013003 | 0.079 (8)* | |
C11 | 0.6329 (2) | 0.5586 (5) | −0.02378 (10) | 0.1124 (11) | |
H11 | 0.603863 | 0.483089 | −0.048881 | 0.153 (13)* | |
C12 | 0.6059 (2) | 0.7378 (5) | −0.02370 (11) | 0.1102 (11) | |
H12 | 0.558179 | 0.784282 | −0.048581 | 0.119 (10)* | |
C13 | 0.64870 (18) | 0.8485 (4) | 0.01274 (10) | 0.0823 (8) | |
H13 | 0.630452 | 0.970999 | 0.012709 | 0.077 (8)* | |
C14 | 0.71892 (15) | 0.7801 (3) | 0.04968 (8) | 0.0580 (6) | |
H14 | 0.747607 | 0.856790 | 0.074567 | 0.066 (7)* | |
C15 | 0.99888 (13) | 0.6384 (3) | 0.18379 (7) | 0.0411 (5) | |
H15 | 0.984927 | 0.762714 | 0.183158 | 0.046 (5)* | |
C16 | 1.07404 (13) | 0.5654 (2) | 0.22132 (6) | 0.0385 (5) | |
C17 | 1.12335 (12) | 0.3906 (3) | 0.22344 (6) | 0.0369 (4) | |
C18 | 1.12274 (14) | 0.2432 (3) | 0.19159 (7) | 0.0439 (5) | |
H18 | 1.084885 | 0.248467 | 0.160739 | 0.042 (5)* | |
C19 | 1.17878 (15) | 0.0908 (3) | 0.20652 (8) | 0.0539 (6) | |
H19 | 1.177756 | −0.008483 | 0.185639 | 0.058 (6)* | |
C20 | 1.23696 (15) | 0.0810 (3) | 0.25202 (8) | 0.0580 (6) | |
H20 | 1.274298 | −0.024387 | 0.261014 | 0.061 (6)* | |
C21 | 1.24053 (15) | 0.2222 (3) | 0.28373 (8) | 0.0544 (6) | |
H21 | 1.280095 | 0.215710 | 0.314160 | 0.055 (6)* | |
C22 | 1.18325 (13) | 0.3765 (3) | 0.26927 (7) | 0.0416 (5) | |
C23 | 1.10613 (14) | 0.6476 (3) | 0.26490 (7) | 0.0486 (5) | |
H23 | 1.086467 | 0.763553 | 0.273594 | 0.043 (5)* | |
C24 | 0.62285 (14) | 0.2475 (3) | 0.14849 (7) | 0.0484 (5) | |
H24 | 0.634232 | 0.123968 | 0.154452 | 0.048 (6)* | |
C25 | 0.53425 (14) | 0.3321 (3) | 0.16411 (7) | 0.0505 (5) | |
C26 | 0.49308 (14) | 0.5105 (3) | 0.15329 (7) | 0.0505 (5) | |
C27 | 0.52005 (16) | 0.6557 (3) | 0.12573 (8) | 0.0562 (6) | |
H27 | 0.579267 | 0.650487 | 0.110411 | 0.052 (6)* | |
C28 | 0.45807 (19) | 0.8070 (3) | 0.12143 (10) | 0.0786 (7) | |
H28 | 0.476153 | 0.905300 | 0.103174 | 0.076 (8)* | |
C29 | 0.3689 (2) | 0.8173 (4) | 0.14363 (12) | 0.1049 (10) | |
H29 | 0.328037 | 0.921466 | 0.139702 | 0.122 (10)* | |
C30 | 0.3405 (2) | 0.6771 (4) | 0.17108 (12) | 0.1036 (10) | |
H30 | 0.281159 | 0.683543 | 0.186279 | 0.101 (9)* | |
C31 | 0.40318 (18) | 0.5254 (4) | 0.17543 (10) | 0.0733 (7) | |
C32 | 0.46970 (18) | 0.2500 (4) | 0.19247 (9) | 0.0773 (7) | |
H32 | 0.477661 | 0.132346 | 0.204873 | 0.071 (7)* | |
N1 | 0.76775 (11) | 0.2260 (2) | 0.11353 (5) | 0.0405 (4) | |
N2 | 0.68695 (11) | 0.3368 (2) | 0.12654 (5) | 0.0433 (4) | |
N3 | 0.88012 (11) | 0.6319 (2) | 0.11766 (5) | 0.0419 (4) | |
N4 | 0.95074 (11) | 0.5349 (2) | 0.15116 (5) | 0.0432 (4) | |
N5 | 1.17037 (12) | 0.5365 (2) | 0.29348 (6) | 0.0519 (5) | |
H35 | 1.198934 | 0.561788 | 0.322448 | 0.065 (7)* | |
N6 | 0.39279 (16) | 0.3652 (3) | 0.19973 (9) | 0.0954 (8) | |
H36 | 0.344338 | 0.341855 | 0.217039 | 0.103 (9)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0382 (11) | 0.0372 (11) | 0.0317 (10) | −0.0033 (9) | −0.0014 (9) | 0.0022 (9) |
C2 | 0.0403 (11) | 0.0408 (12) | 0.0317 (10) | −0.0045 (9) | 0.0029 (9) | 0.0017 (9) |
C3 | 0.0471 (12) | 0.0435 (13) | 0.0517 (12) | −0.0016 (10) | 0.0076 (10) | −0.0016 (11) |
C4 | 0.0624 (15) | 0.0486 (15) | 0.0702 (16) | 0.0082 (12) | 0.0130 (12) | −0.0046 (12) |
C5 | 0.0667 (17) | 0.0754 (18) | 0.0768 (17) | 0.0164 (15) | 0.0276 (14) | −0.0022 (15) |
C6 | 0.0735 (17) | 0.0847 (19) | 0.0810 (18) | 0.0034 (15) | 0.0430 (15) | 0.0145 (16) |
C7 | 0.0676 (15) | 0.0539 (15) | 0.0602 (14) | 0.0078 (12) | 0.0244 (12) | 0.0141 (12) |
C8 | 0.0348 (10) | 0.0393 (12) | 0.0395 (11) | −0.0019 (9) | 0.0063 (9) | 0.0061 (9) |
C9 | 0.0402 (11) | 0.0441 (12) | 0.0460 (12) | −0.0054 (10) | 0.0029 (9) | 0.0133 (10) |
C10 | 0.0896 (19) | 0.0590 (17) | 0.0626 (15) | −0.0068 (14) | −0.0226 (14) | 0.0078 (13) |
C11 | 0.139 (3) | 0.095 (2) | 0.084 (2) | −0.016 (2) | −0.059 (2) | 0.0148 (19) |
C12 | 0.100 (2) | 0.109 (3) | 0.104 (2) | −0.008 (2) | −0.0505 (19) | 0.045 (2) |
C13 | 0.0655 (16) | 0.0687 (19) | 0.107 (2) | 0.0087 (15) | −0.0107 (15) | 0.0384 (17) |
C14 | 0.0476 (13) | 0.0526 (14) | 0.0711 (15) | −0.0012 (11) | −0.0019 (12) | 0.0162 (13) |
C15 | 0.0357 (11) | 0.0341 (12) | 0.0541 (13) | 0.0003 (9) | 0.0086 (10) | −0.0037 (10) |
C16 | 0.0303 (10) | 0.0425 (12) | 0.0421 (11) | −0.0002 (9) | 0.0028 (9) | −0.0082 (10) |
C17 | 0.0279 (10) | 0.0447 (12) | 0.0384 (11) | −0.0037 (9) | 0.0052 (8) | −0.0024 (9) |
C18 | 0.0381 (11) | 0.0480 (13) | 0.0445 (12) | 0.0010 (10) | 0.0016 (9) | −0.0051 (10) |
C19 | 0.0461 (13) | 0.0457 (13) | 0.0700 (15) | 0.0040 (11) | 0.0084 (11) | −0.0045 (13) |
C20 | 0.0451 (13) | 0.0558 (15) | 0.0730 (16) | 0.0089 (12) | 0.0069 (12) | 0.0171 (13) |
C21 | 0.0378 (12) | 0.0779 (17) | 0.0457 (13) | 0.0011 (12) | −0.0010 (10) | 0.0176 (13) |
C22 | 0.0323 (10) | 0.0540 (13) | 0.0388 (11) | −0.0034 (10) | 0.0059 (9) | 0.0001 (10) |
C23 | 0.0365 (11) | 0.0500 (14) | 0.0592 (13) | −0.0020 (10) | 0.0054 (10) | −0.0159 (11) |
C24 | 0.0394 (12) | 0.0478 (14) | 0.0568 (13) | −0.0046 (10) | 0.0017 (10) | 0.0080 (11) |
C25 | 0.0363 (12) | 0.0561 (14) | 0.0599 (14) | −0.0085 (11) | 0.0097 (10) | 0.0034 (11) |
C26 | 0.0360 (12) | 0.0565 (14) | 0.0593 (14) | −0.0070 (10) | 0.0076 (10) | −0.0086 (12) |
C27 | 0.0464 (13) | 0.0570 (15) | 0.0650 (15) | −0.0012 (12) | 0.0071 (11) | −0.0049 (12) |
C28 | 0.0728 (18) | 0.0533 (16) | 0.112 (2) | 0.0033 (14) | 0.0201 (16) | −0.0005 (16) |
C29 | 0.078 (2) | 0.070 (2) | 0.173 (3) | 0.0164 (18) | 0.040 (2) | −0.009 (2) |
C30 | 0.0711 (19) | 0.083 (2) | 0.169 (3) | 0.0079 (17) | 0.061 (2) | −0.018 (2) |
C31 | 0.0542 (15) | 0.0665 (17) | 0.105 (2) | −0.0063 (14) | 0.0320 (14) | −0.0091 (16) |
C32 | 0.0602 (16) | 0.0682 (18) | 0.109 (2) | −0.0021 (14) | 0.0310 (15) | 0.0156 (16) |
N1 | 0.0377 (9) | 0.0403 (9) | 0.0432 (9) | 0.0002 (8) | 0.0047 (8) | 0.0053 (8) |
N2 | 0.0371 (9) | 0.0443 (10) | 0.0486 (10) | −0.0012 (8) | 0.0064 (8) | 0.0054 (8) |
N3 | 0.0391 (9) | 0.0377 (10) | 0.0472 (9) | 0.0001 (8) | −0.0012 (8) | 0.0063 (8) |
N4 | 0.0424 (9) | 0.0375 (9) | 0.0471 (10) | 0.0013 (8) | −0.0034 (8) | 0.0011 (8) |
N5 | 0.0405 (10) | 0.0736 (13) | 0.0397 (10) | −0.0041 (9) | −0.0013 (8) | −0.0112 (10) |
N6 | 0.0672 (14) | 0.0917 (18) | 0.141 (2) | −0.0066 (13) | 0.0629 (15) | 0.0055 (16) |
Geometric parameters (Å, º) top
C1—N1 | 1.286 (2) | C18—C19 | 1.370 (2) |
C1—C2 | 1.471 (2) | C18—H18 | 0.9300 |
C1—C8 | 1.505 (2) | C19—C20 | 1.385 (3) |
C2—C7 | 1.382 (2) | C19—H19 | 0.9300 |
C2—C3 | 1.382 (2) | C20—C21 | 1.357 (3) |
C3—C4 | 1.367 (3) | C20—H20 | 0.9300 |
C3—H3 | 0.9300 | C21—C22 | 1.386 (3) |
C4—C5 | 1.365 (3) | C21—H21 | 0.9300 |
C4—H4 | 0.9300 | C22—N5 | 1.374 (2) |
C5—C6 | 1.370 (3) | C23—N5 | 1.348 (2) |
C5—H5 | 0.9300 | C23—H23 | 0.9300 |
C6—C7 | 1.373 (3) | C24—N2 | 1.278 (2) |
C6—H6 | 0.9300 | C24—C25 | 1.428 (3) |
C7—H7 | 0.9300 | C24—H24 | 0.9300 |
C8—N3 | 1.286 (2) | C25—C32 | 1.367 (3) |
C8—C9 | 1.473 (2) | C25—C26 | 1.431 (3) |
C9—C10 | 1.375 (3) | C26—C27 | 1.384 (3) |
C9—C14 | 1.382 (3) | C26—C31 | 1.398 (3) |
C10—C11 | 1.378 (3) | C27—C28 | 1.369 (3) |
C10—H10 | 0.9300 | C27—H27 | 0.9300 |
C11—C12 | 1.361 (4) | C28—C29 | 1.387 (3) |
C11—H11 | 0.9300 | C28—H28 | 0.9300 |
C12—C13 | 1.358 (3) | C29—C30 | 1.361 (4) |
C12—H12 | 0.9300 | C29—H29 | 0.9300 |
C13—C14 | 1.374 (3) | C30—C31 | 1.376 (3) |
C13—H13 | 0.9300 | C30—H30 | 0.9300 |
C14—H14 | 0.9300 | C31—N6 | 1.371 (3) |
C15—N4 | 1.280 (2) | C32—N6 | 1.347 (3) |
C15—C16 | 1.435 (2) | C32—H32 | 0.9300 |
C15—H15 | 0.9300 | N1—N2 | 1.4146 (19) |
C16—C23 | 1.367 (2) | N3—N4 | 1.4104 (18) |
C16—C17 | 1.432 (2) | N5—H35 | 0.8600 |
C17—C18 | 1.397 (2) | N6—H36 | 0.8600 |
C17—C22 | 1.404 (2) | | |
| | | |
N1—C1—C2 | 120.37 (17) | C17—C18—H18 | 120.5 |
N1—C1—C8 | 120.56 (16) | C18—C19—C20 | 121.5 (2) |
C2—C1—C8 | 119.05 (16) | C18—C19—H19 | 119.2 |
C7—C2—C3 | 117.65 (19) | C20—C19—H19 | 119.2 |
C7—C2—C1 | 120.61 (18) | C21—C20—C19 | 121.3 (2) |
C3—C2—C1 | 121.69 (17) | C21—C20—H20 | 119.4 |
C4—C3—C2 | 121.4 (2) | C19—C20—H20 | 119.4 |
C4—C3—H3 | 119.3 | C20—C21—C22 | 117.78 (19) |
C2—C3—H3 | 119.3 | C20—C21—H21 | 121.1 |
C5—C4—C3 | 120.2 (2) | C22—C21—H21 | 121.1 |
C5—C4—H4 | 119.9 | N5—C22—C21 | 130.74 (18) |
C3—C4—H4 | 119.9 | N5—C22—C17 | 106.91 (17) |
C4—C5—C6 | 119.4 (2) | C21—C22—C17 | 122.34 (19) |
C4—C5—H5 | 120.3 | N5—C23—C16 | 110.24 (18) |
C6—C5—H5 | 120.3 | N5—C23—H23 | 124.9 |
C5—C6—C7 | 120.5 (2) | C16—C23—H23 | 124.9 |
C5—C6—H6 | 119.8 | N2—C24—C25 | 121.8 (2) |
C7—C6—H6 | 119.8 | N2—C24—H24 | 119.1 |
C6—C7—C2 | 120.8 (2) | C25—C24—H24 | 119.1 |
C6—C7—H7 | 119.6 | C32—C25—C24 | 124.6 (2) |
C2—C7—H7 | 119.6 | C32—C25—C26 | 106.42 (19) |
N3—C8—C9 | 119.37 (17) | C24—C25—C26 | 129.00 (19) |
N3—C8—C1 | 121.09 (16) | C27—C26—C31 | 118.2 (2) |
C9—C8—C1 | 119.54 (16) | C27—C26—C25 | 134.79 (19) |
C10—C9—C14 | 118.1 (2) | C31—C26—C25 | 107.0 (2) |
C10—C9—C8 | 120.07 (19) | C28—C27—C26 | 118.9 (2) |
C14—C9—C8 | 121.78 (19) | C28—C27—H27 | 120.6 |
C9—C10—C11 | 120.6 (3) | C26—C27—H27 | 120.6 |
C9—C10—H10 | 119.7 | C27—C28—C29 | 121.6 (3) |
C11—C10—H10 | 119.7 | C27—C28—H28 | 119.2 |
C12—C11—C10 | 120.3 (3) | C29—C28—H28 | 119.2 |
C12—C11—H11 | 119.9 | C30—C29—C28 | 120.9 (3) |
C10—C11—H11 | 119.9 | C30—C29—H29 | 119.5 |
C13—C12—C11 | 119.9 (3) | C28—C29—H29 | 119.5 |
C13—C12—H12 | 120.0 | C29—C30—C31 | 117.3 (3) |
C11—C12—H12 | 120.0 | C29—C30—H30 | 121.4 |
C12—C13—C14 | 120.2 (3) | C31—C30—H30 | 121.4 |
C12—C13—H13 | 119.9 | N6—C31—C30 | 129.8 (2) |
C14—C13—H13 | 119.9 | N6—C31—C26 | 107.0 (2) |
C13—C14—C9 | 120.8 (2) | C30—C31—C26 | 123.2 (3) |
C13—C14—H14 | 119.6 | N6—C32—C25 | 109.6 (2) |
C9—C14—H14 | 119.6 | N6—C32—H32 | 125.2 |
N4—C15—C16 | 120.91 (17) | C25—C32—H32 | 125.2 |
N4—C15—H15 | 119.5 | C1—N1—N2 | 111.77 (15) |
C16—C15—H15 | 119.5 | C24—N2—N1 | 112.49 (16) |
C23—C16—C17 | 106.07 (16) | C8—N3—N4 | 111.16 (15) |
C23—C16—C15 | 125.16 (17) | C15—N4—N3 | 112.39 (15) |
C17—C16—C15 | 128.56 (16) | C23—N5—C22 | 109.62 (16) |
C18—C17—C22 | 118.16 (17) | C23—N5—H35 | 125.2 |
C18—C17—C16 | 134.69 (17) | C22—N5—H35 | 125.2 |
C22—C17—C16 | 107.15 (16) | C32—N6—C31 | 109.9 (2) |
C19—C18—C17 | 118.92 (18) | C32—N6—H36 | 125.0 |
C19—C18—H18 | 120.5 | C31—N6—H36 | 125.0 |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N5—H35···N1i | 0.86 | 2.14 | 2.948 (2) | 156 |
C3—H3···N3ii | 0.93 | 2.61 | 3.320 (3) | 133 |
Symmetry codes: (i) −x+2, y+1/2, −z+1/2; (ii) x, y−1, z. |
(1
Z,2
Z)-1,2-Bis{(
E)-[1-(1
H-indol-3-yl)ethylidene]hydrazinylidene}-1,2-diphenylethane (2-BDHAI)
top
Crystal data top
C34H28N6 | Z = 2 |
Mr = 520.62 | F(000) = 548 |
Triclinic, P1 | Dx = 1.252 Mg m−3 |
a = 10.2585 (4) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 11.9610 (5) Å | Cell parameters from 380 reflections |
c = 12.8232 (6) Å | θ = 2.5–26.0° |
α = 64.941 (4)° | µ = 0.08 mm−1 |
β = 79.573 (3)° | T = 293 K |
γ = 76.829 (4)° | Bar, yellow |
V = 1381.45 (11) Å3 | 0.35 × 0.15 × 0.12 mm |
Data collection top
Bruker SMART CCD area detector diffractometer | 5328 independent reflections |
Radiation source: fine-focus sealed tube | 4490 reflections with I > 2σ(I) |
Detector resolution: 10.13 pixels mm-1 | Rint = 0.026 |
phi and ω scans | θmax = 26.0°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −12→12 |
Tmin = 0.903, Tmax = 0.939 | k = −14→14 |
15195 measured reflections | l = −13→15 |
Refinement top
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | Only H-atom displacement parameters refined |
R[F2 > 2σ(F2)] = 0.044 | w = 1/[σ2(Fo2) + (0.0694P)2 + 0.1725P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.129 | (Δ/σ)max < 0.001 |
S = 1.05 | Δρmax = 0.19 e Å−3 |
5328 reflections | Δρmin = −0.18 e Å−3 |
392 parameters | Extinction correction: SHELXL2016 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
0 restraints | Extinction coefficient: 0.083 (4) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and
goodness of fit S are based on F2, conventional R-factors R are based
on F, with F set to zero for negative F2. The threshold expression of
F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is
not relevant to the choice of reflections for refinement. R-factors based
on F2 are statistically about twice as large as those based on F, and R-
factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.21600 (13) | 0.84926 (13) | 0.45306 (11) | 0.0462 (3) | |
C2 | 0.24638 (13) | 0.97764 (13) | 0.38744 (12) | 0.0491 (3) | |
C3 | 0.15001 (16) | 1.07464 (15) | 0.32585 (16) | 0.0648 (4) | |
H2 | 0.067148 | 1.057647 | 0.322519 | 0.081 (6)* | |
C4 | 0.17520 (19) | 1.19565 (16) | 0.26959 (17) | 0.0746 (5) | |
H3 | 0.109933 | 1.259075 | 0.227799 | 0.097 (7)* | |
C5 | 0.2954 (2) | 1.22291 (17) | 0.27488 (16) | 0.0739 (5) | |
H4 | 0.311226 | 1.304989 | 0.238380 | 0.085 (6)* | |
C6 | 0.3928 (2) | 1.12876 (18) | 0.33426 (16) | 0.0747 (5) | |
H5 | 0.474994 | 1.147161 | 0.337453 | 0.092 (6)* | |
C7 | 0.36938 (16) | 1.00565 (16) | 0.38983 (14) | 0.0618 (4) | |
H6 | 0.436524 | 0.942110 | 0.428646 | 0.072 (5)* | |
C8 | 0.32668 (13) | 0.74348 (13) | 0.50875 (12) | 0.0483 (3) | |
C9 | 0.34159 (15) | 0.70585 (14) | 0.63212 (12) | 0.0551 (4) | |
C10 | 0.26077 (17) | 0.77226 (18) | 0.69346 (14) | 0.0658 (4) | |
H7 | 0.196310 | 0.840386 | 0.656770 | 0.065 (5)* | |
C11 | 0.2755 (2) | 0.7377 (2) | 0.80900 (17) | 0.0877 (6) | |
H10 | 0.221187 | 0.782867 | 0.849312 | 0.088 (6)* | |
C12 | 0.3700 (3) | 0.6372 (3) | 0.86403 (18) | 0.1028 (8) | |
H12 | 0.379338 | 0.613722 | 0.941672 | 0.113 (8)* | |
C13 | 0.4506 (3) | 0.5713 (2) | 0.80406 (19) | 0.0961 (7) | |
H13 | 0.514323 | 0.502950 | 0.841665 | 0.118 (8)* | |
C14 | 0.4385 (2) | 0.60529 (17) | 0.68842 (16) | 0.0721 (5) | |
H11 | 0.495074 | 0.560945 | 0.648337 | 0.099 (7)* | |
C15 | 0.49611 (13) | 0.72877 (13) | 0.26579 (13) | 0.0491 (3) | |
C16 | 0.48156 (13) | 0.78461 (14) | 0.14310 (13) | 0.0501 (3) | |
C17 | 0.36770 (13) | 0.86989 (13) | 0.08418 (12) | 0.0484 (3) | |
C18 | 0.24161 (14) | 0.92420 (14) | 0.11937 (14) | 0.0546 (4) | |
H18 | 0.214228 | 0.904063 | 0.197491 | 0.058 (4)* | |
C19 | 0.15878 (17) | 1.00782 (16) | 0.03671 (16) | 0.0668 (4) | |
H19 | 0.074912 | 1.044421 | 0.059733 | 0.071 (5)* | |
C20 | 0.19753 (19) | 1.03927 (18) | −0.08130 (17) | 0.0753 (5) | |
H20 | 0.138681 | 1.095426 | −0.135092 | 0.091 (6)* | |
C21 | 0.32077 (19) | 0.98860 (17) | −0.11877 (16) | 0.0722 (5) | |
H21 | 0.347018 | 1.009515 | −0.197140 | 0.085 (6)* | |
C22 | 0.40519 (15) | 0.90475 (15) | −0.03532 (14) | 0.0580 (4) | |
C23 | 0.57959 (16) | 0.77510 (17) | 0.05713 (15) | 0.0646 (4) | |
H23 | 0.665006 | 0.727371 | 0.069683 | 0.077 (5)* | |
C24 | −0.03270 (14) | 0.68082 (14) | 0.52381 (12) | 0.0518 (3) | |
C25 | −0.07215 (13) | 0.56489 (14) | 0.61098 (13) | 0.0506 (3) | |
C26 | −0.03001 (13) | 0.49580 (13) | 0.72570 (12) | 0.0466 (3) | |
C27 | 0.05813 (13) | 0.51142 (13) | 0.78861 (13) | 0.0493 (3) | |
H27 | 0.108227 | 0.575950 | 0.754067 | 0.056 (4)* | |
C28 | 0.06910 (15) | 0.42989 (14) | 0.90189 (14) | 0.0572 (4) | |
H28 | 0.126490 | 0.440283 | 0.944331 | 0.063 (4)* | |
C29 | −0.00429 (17) | 0.33154 (16) | 0.95472 (15) | 0.0654 (4) | |
H29 | 0.005442 | 0.277666 | 1.031582 | 0.076 (5)* | |
C30 | −0.09047 (17) | 0.31280 (15) | 0.89550 (14) | 0.0638 (4) | |
H30 | −0.139175 | 0.247275 | 0.930808 | 0.067 (5)* | |
C31 | −0.10219 (14) | 0.39519 (14) | 0.78113 (13) | 0.0523 (3) | |
C32 | −0.16427 (15) | 0.50232 (15) | 0.60219 (14) | 0.0587 (4) | |
H32 | −0.208006 | 0.525861 | 0.536678 | 0.069 (5)* | |
C33 | 0.63359 (15) | 0.6710 (2) | 0.30611 (17) | 0.0733 (5) | |
H33A | 0.627256 | 0.598418 | 0.377122 | 0.100 (7)* | |
H33B | 0.670603 | 0.730677 | 0.318564 | 0.135 (10)* | |
H33C | 0.690878 | 0.646881 | 0.248427 | 0.141 (10)* | |
C34 | −0.1161 (2) | 0.7575 (2) | 0.42427 (18) | 0.0840 (6) | |
H34A | −0.209716 | 0.760959 | 0.451964 | 0.145 (10)* | |
H34B | −0.096409 | 0.719957 | 0.369015 | 0.187 (15)* | |
H34C | −0.095464 | 0.840849 | 0.388088 | 0.162 (12)* | |
N1 | 0.09402 (11) | 0.83288 (11) | 0.46297 (10) | 0.0520 (3) | |
N2 | 0.07283 (11) | 0.71200 (11) | 0.53875 (10) | 0.0511 (3) | |
N3 | 0.41191 (12) | 0.68906 (12) | 0.45120 (11) | 0.0548 (3) | |
N4 | 0.38813 (11) | 0.73680 (11) | 0.33433 (10) | 0.0519 (3) | |
N5 | 0.53458 (14) | 0.84467 (15) | −0.04798 (13) | 0.0703 (4) | |
H35 | 0.579886 | 0.850515 | −0.112912 | 0.078 (6)* | |
N6 | −0.18231 (13) | 0.40170 (13) | 0.70225 (12) | 0.0616 (3) | |
H36 | −0.235238 | 0.350076 | 0.714696 | 0.067 (5)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0423 (7) | 0.0552 (8) | 0.0428 (7) | −0.0102 (6) | −0.0023 (5) | −0.0209 (6) |
C2 | 0.0477 (7) | 0.0542 (8) | 0.0474 (7) | −0.0112 (6) | 0.0035 (6) | −0.0240 (6) |
C3 | 0.0527 (9) | 0.0554 (9) | 0.0832 (12) | −0.0035 (7) | −0.0033 (8) | −0.0290 (8) |
C4 | 0.0773 (12) | 0.0530 (9) | 0.0828 (12) | 0.0011 (8) | −0.0006 (9) | −0.0258 (9) |
C5 | 0.0939 (13) | 0.0564 (10) | 0.0705 (11) | −0.0265 (9) | 0.0144 (10) | −0.0263 (9) |
C6 | 0.0774 (12) | 0.0841 (12) | 0.0683 (11) | −0.0422 (10) | 0.0061 (9) | −0.0267 (10) |
C7 | 0.0584 (9) | 0.0682 (10) | 0.0558 (9) | −0.0233 (8) | −0.0028 (7) | −0.0168 (8) |
C8 | 0.0423 (7) | 0.0525 (7) | 0.0497 (7) | −0.0145 (6) | −0.0069 (5) | −0.0159 (6) |
C9 | 0.0551 (8) | 0.0637 (9) | 0.0482 (8) | −0.0273 (7) | −0.0065 (6) | −0.0146 (7) |
C10 | 0.0615 (9) | 0.0890 (12) | 0.0559 (9) | −0.0315 (9) | 0.0007 (7) | −0.0307 (9) |
C11 | 0.0973 (15) | 0.1285 (18) | 0.0574 (11) | −0.0604 (14) | 0.0098 (10) | −0.0423 (12) |
C12 | 0.135 (2) | 0.129 (2) | 0.0500 (11) | −0.0707 (17) | −0.0199 (12) | −0.0125 (12) |
C13 | 0.1239 (19) | 0.0874 (14) | 0.0670 (13) | −0.0360 (13) | −0.0424 (13) | 0.0009 (11) |
C14 | 0.0827 (12) | 0.0656 (10) | 0.0621 (10) | −0.0199 (9) | −0.0247 (9) | −0.0091 (8) |
C15 | 0.0371 (7) | 0.0541 (8) | 0.0646 (9) | −0.0047 (5) | −0.0092 (6) | −0.0316 (7) |
C16 | 0.0397 (7) | 0.0592 (8) | 0.0596 (8) | −0.0084 (6) | −0.0049 (6) | −0.0314 (7) |
C17 | 0.0443 (7) | 0.0536 (8) | 0.0555 (8) | −0.0133 (6) | −0.0074 (6) | −0.0260 (6) |
C18 | 0.0440 (7) | 0.0601 (9) | 0.0617 (9) | −0.0089 (6) | −0.0080 (6) | −0.0249 (7) |
C19 | 0.0504 (8) | 0.0666 (10) | 0.0792 (11) | −0.0039 (7) | −0.0157 (8) | −0.0245 (9) |
C20 | 0.0709 (11) | 0.0730 (11) | 0.0739 (12) | −0.0109 (9) | −0.0270 (9) | −0.0144 (9) |
C21 | 0.0812 (12) | 0.0785 (12) | 0.0560 (10) | −0.0214 (9) | −0.0127 (8) | −0.0197 (9) |
C22 | 0.0572 (9) | 0.0658 (9) | 0.0582 (9) | −0.0174 (7) | −0.0040 (7) | −0.0287 (8) |
C23 | 0.0454 (8) | 0.0799 (11) | 0.0728 (11) | −0.0033 (7) | −0.0008 (7) | −0.0403 (9) |
C24 | 0.0452 (7) | 0.0626 (8) | 0.0514 (8) | −0.0116 (6) | −0.0077 (6) | −0.0238 (7) |
C25 | 0.0412 (7) | 0.0605 (8) | 0.0553 (8) | −0.0120 (6) | −0.0053 (6) | −0.0261 (7) |
C26 | 0.0370 (6) | 0.0511 (7) | 0.0550 (8) | −0.0065 (5) | −0.0015 (5) | −0.0259 (6) |
C27 | 0.0393 (7) | 0.0533 (8) | 0.0597 (8) | −0.0076 (6) | −0.0050 (6) | −0.0268 (7) |
C28 | 0.0507 (8) | 0.0632 (9) | 0.0612 (9) | −0.0041 (7) | −0.0113 (7) | −0.0285 (8) |
C29 | 0.0717 (10) | 0.0629 (9) | 0.0559 (9) | −0.0118 (8) | −0.0085 (7) | −0.0173 (8) |
C30 | 0.0667 (10) | 0.0600 (9) | 0.0637 (10) | −0.0212 (8) | −0.0015 (7) | −0.0205 (8) |
C31 | 0.0451 (7) | 0.0556 (8) | 0.0615 (9) | −0.0124 (6) | −0.0015 (6) | −0.0279 (7) |
C32 | 0.0517 (8) | 0.0719 (10) | 0.0592 (9) | −0.0199 (7) | −0.0093 (7) | −0.0264 (8) |
C33 | 0.0415 (8) | 0.1008 (14) | 0.0788 (12) | 0.0007 (8) | −0.0161 (8) | −0.0393 (12) |
C34 | 0.0788 (13) | 0.0926 (14) | 0.0750 (12) | −0.0343 (10) | −0.0343 (10) | −0.0076 (11) |
N1 | 0.0446 (6) | 0.0569 (7) | 0.0529 (7) | −0.0122 (5) | −0.0037 (5) | −0.0189 (6) |
N2 | 0.0433 (6) | 0.0556 (7) | 0.0527 (7) | −0.0142 (5) | −0.0052 (5) | −0.0170 (5) |
N3 | 0.0479 (6) | 0.0619 (7) | 0.0532 (7) | −0.0043 (5) | −0.0122 (5) | −0.0211 (6) |
N4 | 0.0417 (6) | 0.0623 (7) | 0.0527 (7) | −0.0022 (5) | −0.0094 (5) | −0.0253 (6) |
N5 | 0.0636 (8) | 0.0916 (10) | 0.0592 (8) | −0.0122 (7) | 0.0065 (7) | −0.0386 (8) |
N6 | 0.0556 (7) | 0.0690 (8) | 0.0689 (8) | −0.0282 (6) | −0.0055 (6) | −0.0271 (7) |
Geometric parameters (Å, º) top
C1—N1 | 1.2858 (17) | C19—H19 | 0.9300 |
C1—C2 | 1.4805 (19) | C20—C21 | 1.369 (3) |
C1—C8 | 1.5078 (19) | C20—H20 | 0.9300 |
C2—C7 | 1.386 (2) | C21—C22 | 1.390 (2) |
C2—C3 | 1.390 (2) | C21—H21 | 0.9300 |
C3—C4 | 1.379 (2) | C22—N5 | 1.375 (2) |
C3—H2 | 0.9300 | C23—N5 | 1.350 (2) |
C4—C5 | 1.365 (3) | C23—H23 | 0.9300 |
C4—H3 | 0.9300 | C24—N2 | 1.2913 (17) |
C5—C6 | 1.372 (3) | C24—C25 | 1.454 (2) |
C5—H4 | 0.9300 | C24—C34 | 1.499 (2) |
C6—C7 | 1.394 (2) | C25—C32 | 1.3777 (19) |
C6—H5 | 0.9300 | C25—C26 | 1.439 (2) |
C7—H6 | 0.9300 | C26—C27 | 1.4042 (19) |
C8—N3 | 1.2832 (18) | C26—C31 | 1.4116 (19) |
C8—C9 | 1.4771 (19) | C27—C28 | 1.372 (2) |
C9—C10 | 1.389 (2) | C27—H27 | 0.9300 |
C9—C14 | 1.391 (2) | C28—C29 | 1.398 (2) |
C10—C11 | 1.387 (2) | C28—H28 | 0.9300 |
C10—H7 | 0.9300 | C29—C30 | 1.373 (2) |
C11—C12 | 1.371 (3) | C29—H29 | 0.9300 |
C11—H10 | 0.9300 | C30—C31 | 1.386 (2) |
C12—C13 | 1.372 (4) | C30—H30 | 0.9300 |
C12—H12 | 0.9300 | C31—N6 | 1.3819 (19) |
C13—C14 | 1.383 (3) | C32—N6 | 1.355 (2) |
C13—H13 | 0.9300 | C32—H32 | 0.9300 |
C14—H11 | 0.9300 | C33—H33A | 0.9600 |
C15—N4 | 1.2959 (17) | C33—H33B | 0.9600 |
C15—C16 | 1.447 (2) | C33—H33C | 0.9600 |
C15—C33 | 1.5004 (19) | C34—H34A | 0.9600 |
C16—C23 | 1.376 (2) | C34—H34B | 0.9600 |
C16—C17 | 1.4489 (19) | C34—H34C | 0.9600 |
C17—C18 | 1.397 (2) | N1—N2 | 1.3995 (16) |
C17—C22 | 1.410 (2) | N3—N4 | 1.4055 (16) |
C18—C19 | 1.374 (2) | N5—H35 | 0.8600 |
C18—H18 | 0.9300 | N6—H36 | 0.8600 |
C19—C20 | 1.399 (3) | | |
| | | |
N1—C1—C2 | 118.19 (12) | C19—C20—H20 | 119.5 |
N1—C1—C8 | 122.27 (12) | C20—C21—C22 | 117.52 (17) |
C2—C1—C8 | 119.51 (11) | C20—C21—H21 | 121.2 |
C7—C2—C3 | 118.12 (14) | C22—C21—H21 | 121.2 |
C7—C2—C1 | 121.02 (13) | N5—C22—C21 | 129.92 (16) |
C3—C2—C1 | 120.80 (13) | N5—C22—C17 | 107.44 (14) |
C4—C3—C2 | 121.09 (16) | C21—C22—C17 | 122.61 (15) |
C4—C3—H2 | 119.5 | N5—C23—C16 | 110.58 (14) |
C2—C3—H2 | 119.5 | N5—C23—H23 | 124.7 |
C5—C4—C3 | 120.37 (17) | C16—C23—H23 | 124.7 |
C5—C4—H3 | 119.8 | N2—C24—C25 | 116.86 (13) |
C3—C4—H3 | 119.8 | N2—C24—C34 | 123.95 (14) |
C4—C5—C6 | 119.76 (16) | C25—C24—C34 | 119.18 (13) |
C4—C5—H4 | 120.1 | C32—C25—C26 | 105.77 (13) |
C6—C5—H4 | 120.1 | C32—C25—C24 | 126.47 (14) |
C5—C6—C7 | 120.38 (16) | C26—C25—C24 | 127.68 (12) |
C5—C6—H5 | 119.8 | C27—C26—C31 | 118.54 (13) |
C7—C6—H5 | 119.8 | C27—C26—C25 | 134.21 (13) |
C2—C7—C6 | 120.25 (16) | C31—C26—C25 | 107.20 (12) |
C2—C7—H6 | 119.9 | C28—C27—C26 | 118.90 (13) |
C6—C7—H6 | 119.9 | C28—C27—H27 | 120.5 |
N3—C8—C9 | 118.99 (13) | C26—C27—H27 | 120.5 |
N3—C8—C1 | 122.12 (12) | C27—C28—C29 | 121.28 (15) |
C9—C8—C1 | 118.80 (12) | C27—C28—H28 | 119.4 |
C10—C9—C14 | 118.74 (16) | C29—C28—H28 | 119.4 |
C10—C9—C8 | 120.44 (14) | C30—C29—C28 | 121.37 (15) |
C14—C9—C8 | 120.81 (15) | C30—C29—H29 | 119.3 |
C11—C10—C9 | 120.5 (2) | C28—C29—H29 | 119.3 |
C11—C10—H7 | 119.8 | C29—C30—C31 | 117.54 (15) |
C9—C10—H7 | 119.8 | C29—C30—H30 | 121.2 |
C12—C11—C10 | 120.2 (2) | C31—C30—H30 | 121.2 |
C12—C11—H10 | 119.9 | N6—C31—C30 | 130.41 (14) |
C10—C11—H10 | 119.9 | N6—C31—C26 | 107.20 (13) |
C11—C12—C13 | 119.71 (19) | C30—C31—C26 | 122.35 (14) |
C11—C12—H12 | 120.1 | N6—C32—C25 | 110.60 (13) |
C13—C12—H12 | 120.1 | N6—C32—H32 | 124.7 |
C12—C13—C14 | 120.9 (2) | C25—C32—H32 | 124.7 |
C12—C13—H13 | 119.6 | C15—C33—H33A | 109.5 |
C14—C13—H13 | 119.6 | C15—C33—H33B | 109.5 |
C13—C14—C9 | 119.9 (2) | H33A—C33—H33B | 109.5 |
C13—C14—H11 | 120.0 | C15—C33—H33C | 109.5 |
C9—C14—H11 | 120.0 | H33A—C33—H33C | 109.5 |
N4—C15—C16 | 116.92 (12) | H33B—C33—H33C | 109.5 |
N4—C15—C33 | 123.90 (14) | C24—C34—H34A | 109.5 |
C16—C15—C33 | 119.11 (13) | C24—C34—H34B | 109.5 |
C23—C16—C15 | 126.10 (13) | H34A—C34—H34B | 109.5 |
C23—C16—C17 | 105.66 (13) | C24—C34—H34C | 109.5 |
C15—C16—C17 | 128.03 (12) | H34A—C34—H34C | 109.5 |
C18—C17—C22 | 118.36 (14) | H34B—C34—H34C | 109.5 |
C18—C17—C16 | 134.83 (13) | C1—N1—N2 | 113.49 (11) |
C22—C17—C16 | 106.73 (12) | C24—N2—N1 | 114.33 (12) |
C19—C18—C17 | 118.92 (15) | C8—N3—N4 | 112.87 (11) |
C19—C18—H18 | 120.5 | C15—N4—N3 | 113.57 (11) |
C17—C18—H18 | 120.5 | C23—N5—C22 | 109.58 (13) |
C18—C19—C20 | 121.59 (16) | C23—N5—H35 | 125.2 |
C18—C19—H19 | 119.2 | C22—N5—H35 | 125.2 |
C20—C19—H19 | 119.2 | C32—N6—C31 | 109.22 (12) |
C21—C20—C19 | 120.99 (16) | C32—N6—H36 | 125.4 |
C21—C20—H20 | 119.5 | C31—N6—H36 | 125.4 |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N6—H36···N4i | 0.86 | 2.36 | 3.1675 (17) | 156 |
C14—H11···N3 | 0.93 | 2.52 | 2.815 (2) | 99 |
C18—H18···N4 | 0.93 | 2.61 | 3.1003 (19) | 114 |
C27—H27···N2 | 0.93 | 2.59 | 3.0859 (19) | 114 |
C34—H34C···N1 | 0.96 | 2.29 | 2.712 (2) | 106 |
Symmetry code: (i) −x, −y+1, −z+1. |
(1
Z,2
Z)-1,2-Bis{(
E)-[(1-methyl-1
H-indol-3-yl)\
methylidene]hydrazinylidene}-1,2-diphenylethane acetonitrile hemisolvate (3-BDHMFI)
top
Crystal data top
2C34H28N6·C2H3N | Z = 1 |
Mr = 1082.30 | F(000) = 570 |
Triclinic, P1 | Dx = 1.222 Mg m−3 |
a = 11.2710 (6) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 11.6944 (7) Å | Cell parameters from 380 reflections |
c = 12.5164 (6) Å | θ = 2.5–26.0° |
α = 79.875 (4)° | µ = 0.08 mm−1 |
β = 87.701 (4)° | T = 293 K |
γ = 64.941 (6)° | Block, yellow |
V = 1470.10 (15) Å3 | 0.35 × 0.20 × 0.15 mm |
Data collection top
Bruker SMART CCD area detector diffractometer | 5640 independent reflections |
Radiation source: fine-focus sealed tube | 4445 reflections with I > 2σ(I) |
Detector resolution: 10.13 pixels mm-1 | Rint = 0.029 |
phi and ω scans | θmax = 26.0°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −13→13 |
Tmin = 0.905, Tmax = 0.943 | k = −14→14 |
13418 measured reflections | l = −15→10 |
Refinement top
Refinement on F2 | Hydrogen site location: mixed |
Least-squares matrix: full | Only H-atom displacement parameters refined |
R[F2 > 2σ(F2)] = 0.049 | w = 1/[σ2(Fo2) + (0.0801P)2 + 0.1656P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.151 | (Δ/σ)max < 0.001 |
S = 1.04 | Δρmax = 0.22 e Å−3 |
5640 reflections | Δρmin = −0.17 e Å−3 |
424 parameters | Extinction correction: SHELXL2016 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
2 restraints | Extinction coefficient: 0.017 (2) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and
goodness of fit S are based on F2, conventional R-factors R are based
on F, with F set to zero for negative F2. The threshold expression of
F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is
not relevant to the choice of reflections for refinement. R-factors based
on F2 are statistically about twice as large as those based on F, and R-
factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
C1 | 1.02888 (14) | 0.32026 (15) | 0.22614 (13) | 0.0468 (4) | |
C2 | 0.90615 (15) | 0.33587 (15) | 0.17364 (13) | 0.0501 (4) | |
C3 | 0.84410 (18) | 0.4332 (2) | 0.08691 (16) | 0.0645 (5) | |
H3 | 0.880544 | 0.489721 | 0.058970 | 0.072 (6)* | |
C4 | 0.7277 (2) | 0.4466 (2) | 0.04165 (18) | 0.0781 (6) | |
H4 | 0.687632 | 0.511274 | −0.017495 | 0.099 (8)* | |
C5 | 0.6708 (2) | 0.3663 (3) | 0.0825 (2) | 0.0849 (7) | |
H5 | 0.592178 | 0.376884 | 0.051894 | 0.107 (9)* | |
C6 | 0.7306 (2) | 0.2703 (3) | 0.1687 (2) | 0.0930 (8) | |
H6 | 0.692732 | 0.215144 | 0.196816 | 0.116 (10)* | |
C7 | 0.8474 (2) | 0.2552 (2) | 0.21409 (19) | 0.0738 (6) | |
H7 | 0.887172 | 0.189680 | 0.272778 | 0.076 (6)* | |
C8 | 1.09142 (14) | 0.20654 (15) | 0.31530 (13) | 0.0461 (3) | |
C9 | 1.04864 (15) | 0.22239 (16) | 0.42683 (13) | 0.0511 (4) | |
C10 | 0.98055 (18) | 0.34437 (19) | 0.45203 (16) | 0.0630 (5) | |
H10 | 0.966044 | 0.416152 | 0.399284 | 0.081 (7)* | |
C11 | 0.9343 (2) | 0.3596 (2) | 0.55484 (18) | 0.0753 (6) | |
H11 | 0.889723 | 0.441633 | 0.570951 | 0.110 (9)* | |
C12 | 0.9535 (2) | 0.2554 (3) | 0.63306 (18) | 0.0829 (7) | |
H12 | 0.921076 | 0.266331 | 0.701841 | 0.095 (8)* | |
C13 | 1.0203 (3) | 0.1356 (3) | 0.60969 (18) | 0.0939 (8) | |
H13 | 1.034229 | 0.064590 | 0.663129 | 0.118 (10)* | |
C14 | 1.0679 (2) | 0.1181 (2) | 0.50706 (17) | 0.0777 (6) | |
H14 | 1.113059 | 0.035600 | 0.492203 | 0.091 (7)* | |
C15 | 1.28895 (16) | −0.00541 (16) | 0.16524 (14) | 0.0531 (4) | |
H15 | 1.328560 | −0.073073 | 0.222419 | 0.064 (5)* | |
C16 | 1.33243 (15) | −0.02026 (16) | 0.05718 (14) | 0.0518 (4) | |
C17 | 1.28980 (15) | 0.07087 (16) | −0.04259 (14) | 0.0515 (4) | |
C18 | 1.19676 (17) | 0.19828 (18) | −0.07107 (16) | 0.0614 (5) | |
H18 | 1.143422 | 0.241346 | −0.019130 | 0.052 (5)* | |
C19 | 1.1861 (2) | 0.2582 (2) | −0.17750 (19) | 0.0774 (6) | |
H19 | 1.125306 | 0.343031 | −0.196933 | 0.097 (8)* | |
C20 | 1.2642 (2) | 0.1949 (2) | −0.25722 (19) | 0.0811 (6) | |
H20 | 1.254078 | 0.238143 | −0.328465 | 0.086 (7)* | |
C21 | 1.3557 (2) | 0.0698 (2) | −0.23207 (17) | 0.0701 (5) | |
H21 | 1.407365 | 0.027264 | −0.284991 | 0.078 (6)* | |
C22 | 1.36791 (16) | 0.00935 (17) | −0.12438 (14) | 0.0542 (4) | |
C23 | 1.43327 (17) | −0.12886 (17) | 0.03118 (15) | 0.0577 (4) | |
H23 | 1.480119 | −0.202937 | 0.080814 | 0.062 (5)* | |
C24 | 1.22609 (15) | 0.46706 (16) | 0.23777 (13) | 0.0498 (4) | |
H24 | 1.177296 | 0.540514 | 0.188221 | 0.052 (5)* | |
C25 | 1.34296 (15) | 0.45677 (15) | 0.28885 (13) | 0.0493 (4) | |
C26 | 1.43056 (16) | 0.35601 (16) | 0.37025 (13) | 0.0516 (4) | |
C27 | 1.4353 (2) | 0.23960 (18) | 0.42710 (16) | 0.0646 (5) | |
H27 | 1.369824 | 0.213841 | 0.416084 | 0.060 (5)* | |
C28 | 1.5388 (2) | 0.1642 (2) | 0.49961 (18) | 0.0786 (6) | |
H28 | 1.543129 | 0.086425 | 0.537232 | 0.087 (7)* | |
C29 | 1.6376 (2) | 0.2015 (2) | 0.51809 (18) | 0.0779 (6) | |
H29 | 1.706043 | 0.148178 | 0.567771 | 0.094 (7)* | |
C30 | 1.63570 (19) | 0.3150 (2) | 0.46446 (16) | 0.0698 (5) | |
H30 | 1.701242 | 0.340156 | 0.476842 | 0.068 (6)* | |
C31 | 1.53133 (16) | 0.39131 (17) | 0.39055 (14) | 0.0555 (4) | |
C32 | 1.39468 (16) | 0.54558 (17) | 0.26514 (15) | 0.0552 (4) | |
H32 | 1.357655 | 0.621279 | 0.214953 | 0.068 (6)* | |
C33 | 1.55867 (19) | −0.2047 (2) | −0.13077 (19) | 0.0711 (6) | |
H33A | 1.632691 | −0.254020 | −0.081217 | 0.161 (14)* | |
H33B | 1.584307 | −0.159587 | −0.192192 | 0.148 (12)* | |
H33C | 1.527555 | −0.261002 | −0.154903 | 0.097 (8)* | |
C34 | 1.5904 (2) | 0.5748 (2) | 0.3191 (2) | 0.0755 (6) | |
H34A | 1.608336 | 0.583200 | 0.390918 | 0.137 (12)* | |
H34B | 1.547020 | 0.658432 | 0.275475 | 0.135 (12)* | |
H34C | 1.671310 | 0.527112 | 0.286992 | 0.125 (10)* | |
C35 | 1.000000 | 0.000000 | 0.000000 | 0.173 (3) | |
C36 | 1.0793 (6) | −0.1065 (6) | 0.0557 (5) | 0.0879 (13) | 0.5 |
N1 | 1.07253 (12) | 0.40608 (13) | 0.19845 (11) | 0.0508 (3) | |
N2 | 1.18768 (12) | 0.37708 (13) | 0.25908 (11) | 0.0518 (3) | |
N3 | 1.17284 (13) | 0.09578 (13) | 0.29627 (11) | 0.0507 (3) | |
N4 | 1.19636 (13) | 0.09946 (13) | 0.18477 (11) | 0.0526 (3) | |
N5 | 1.45459 (13) | −0.11286 (14) | −0.07613 (12) | 0.0575 (4) | |
N6 | 1.50671 (14) | 0.50781 (15) | 0.32476 (12) | 0.0584 (4) | |
N7 | 1.1399 (6) | −0.1952 (6) | 0.1118 (5) | 0.1225 (18) | 0.5 |
H35A | 0.948 (6) | 0.003 (8) | 0.059 (4) | 0.25 (3)* | |
H35B | 1.025 (14) | 0.055 (10) | 0.029 (13) | 0.26 (6)* | 0.5 |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0396 (7) | 0.0456 (8) | 0.0531 (8) | −0.0121 (6) | 0.0104 (6) | −0.0208 (7) |
C2 | 0.0426 (8) | 0.0491 (8) | 0.0564 (9) | −0.0143 (7) | 0.0062 (6) | −0.0179 (7) |
C3 | 0.0576 (10) | 0.0676 (11) | 0.0639 (11) | −0.0239 (9) | 0.0023 (8) | −0.0074 (9) |
C4 | 0.0607 (11) | 0.0894 (15) | 0.0692 (13) | −0.0193 (11) | −0.0102 (10) | −0.0063 (11) |
C5 | 0.0580 (11) | 0.1048 (18) | 0.0918 (16) | −0.0351 (12) | −0.0151 (11) | −0.0115 (13) |
C6 | 0.0724 (13) | 0.1002 (18) | 0.116 (2) | −0.0521 (14) | −0.0175 (13) | 0.0022 (15) |
C7 | 0.0634 (11) | 0.0706 (12) | 0.0878 (14) | −0.0331 (10) | −0.0137 (10) | 0.0010 (11) |
C8 | 0.0385 (7) | 0.0481 (8) | 0.0530 (9) | −0.0163 (6) | 0.0068 (6) | −0.0180 (7) |
C9 | 0.0420 (7) | 0.0575 (9) | 0.0539 (9) | −0.0176 (7) | 0.0071 (6) | −0.0205 (7) |
C10 | 0.0605 (10) | 0.0645 (11) | 0.0661 (11) | −0.0225 (9) | 0.0168 (8) | −0.0298 (9) |
C11 | 0.0735 (12) | 0.0859 (15) | 0.0723 (13) | −0.0295 (11) | 0.0224 (10) | −0.0440 (12) |
C12 | 0.0815 (14) | 0.1096 (18) | 0.0604 (12) | −0.0359 (13) | 0.0220 (10) | −0.0384 (13) |
C13 | 0.118 (2) | 0.0915 (17) | 0.0575 (12) | −0.0331 (15) | 0.0197 (12) | −0.0110 (12) |
C14 | 0.0913 (15) | 0.0663 (12) | 0.0632 (12) | −0.0206 (11) | 0.0185 (10) | −0.0182 (10) |
C15 | 0.0486 (8) | 0.0464 (8) | 0.0613 (10) | −0.0142 (7) | 0.0069 (7) | −0.0183 (7) |
C16 | 0.0443 (8) | 0.0489 (8) | 0.0631 (10) | −0.0157 (7) | 0.0107 (7) | −0.0247 (7) |
C17 | 0.0429 (7) | 0.0534 (9) | 0.0631 (10) | −0.0205 (7) | 0.0080 (7) | −0.0240 (8) |
C18 | 0.0509 (9) | 0.0574 (10) | 0.0722 (12) | −0.0157 (8) | 0.0050 (8) | −0.0218 (9) |
C19 | 0.0696 (12) | 0.0657 (12) | 0.0843 (14) | −0.0173 (10) | −0.0061 (10) | −0.0092 (10) |
C20 | 0.0868 (15) | 0.0903 (16) | 0.0654 (13) | −0.0385 (13) | −0.0005 (11) | −0.0080 (11) |
C21 | 0.0690 (12) | 0.0851 (14) | 0.0655 (12) | −0.0374 (11) | 0.0152 (9) | −0.0272 (10) |
C22 | 0.0470 (8) | 0.0598 (10) | 0.0638 (10) | −0.0251 (8) | 0.0112 (7) | −0.0263 (8) |
C23 | 0.0520 (9) | 0.0495 (9) | 0.0693 (11) | −0.0154 (7) | 0.0108 (8) | −0.0226 (8) |
C24 | 0.0450 (8) | 0.0483 (8) | 0.0551 (9) | −0.0155 (7) | 0.0138 (7) | −0.0199 (7) |
C25 | 0.0476 (8) | 0.0492 (8) | 0.0536 (9) | −0.0198 (7) | 0.0135 (7) | −0.0201 (7) |
C26 | 0.0507 (8) | 0.0545 (9) | 0.0518 (9) | −0.0207 (7) | 0.0151 (7) | −0.0220 (7) |
C27 | 0.0730 (12) | 0.0600 (11) | 0.0632 (11) | −0.0294 (9) | 0.0133 (9) | −0.0160 (9) |
C28 | 0.0930 (16) | 0.0637 (12) | 0.0678 (12) | −0.0256 (11) | 0.0102 (11) | −0.0049 (10) |
C29 | 0.0685 (12) | 0.0789 (14) | 0.0649 (12) | −0.0123 (11) | 0.0008 (10) | −0.0080 (10) |
C30 | 0.0538 (10) | 0.0875 (14) | 0.0651 (11) | −0.0245 (10) | 0.0061 (8) | −0.0206 (10) |
C31 | 0.0505 (9) | 0.0621 (10) | 0.0537 (9) | −0.0208 (8) | 0.0134 (7) | −0.0206 (8) |
C32 | 0.0526 (9) | 0.0530 (9) | 0.0608 (10) | −0.0214 (7) | 0.0107 (7) | −0.0166 (8) |
C33 | 0.0602 (11) | 0.0689 (12) | 0.0935 (14) | −0.0259 (10) | 0.0314 (10) | −0.0473 (11) |
C34 | 0.0682 (12) | 0.0879 (15) | 0.0898 (15) | −0.0486 (12) | 0.0146 (11) | −0.0260 (12) |
C35 | 0.101 (4) | 0.159 (7) | 0.271 (12) | −0.075 (5) | −0.041 (6) | −0.008 (7) |
C36 | 0.073 (3) | 0.098 (4) | 0.101 (4) | −0.045 (3) | 0.006 (3) | −0.015 (3) |
N1 | 0.0423 (6) | 0.0490 (7) | 0.0604 (8) | −0.0161 (6) | 0.0079 (6) | −0.0178 (6) |
N2 | 0.0425 (7) | 0.0513 (8) | 0.0625 (8) | −0.0180 (6) | 0.0083 (6) | −0.0185 (6) |
N3 | 0.0487 (7) | 0.0484 (7) | 0.0506 (7) | −0.0139 (6) | 0.0088 (6) | −0.0168 (6) |
N4 | 0.0497 (7) | 0.0493 (7) | 0.0533 (8) | −0.0124 (6) | 0.0103 (6) | −0.0195 (6) |
N5 | 0.0499 (7) | 0.0563 (8) | 0.0704 (9) | −0.0196 (7) | 0.0190 (6) | −0.0329 (7) |
N6 | 0.0529 (8) | 0.0640 (9) | 0.0666 (9) | −0.0302 (7) | 0.0104 (6) | −0.0195 (7) |
N7 | 0.123 (4) | 0.127 (4) | 0.113 (4) | −0.058 (4) | 0.005 (3) | 0.003 (3) |
Geometric parameters (Å, º) top
C1—N1 | 1.285 (2) | C21—C22 | 1.390 (3) |
C1—C2 | 1.482 (2) | C21—H21 | 0.9300 |
C1—C8 | 1.503 (2) | C22—N5 | 1.387 (2) |
C2—C3 | 1.384 (3) | C23—N5 | 1.349 (2) |
C2—C7 | 1.385 (3) | C23—H23 | 0.9300 |
C3—C4 | 1.386 (3) | C24—N2 | 1.282 (2) |
C3—H3 | 0.9300 | C24—C25 | 1.437 (2) |
C4—C5 | 1.367 (3) | C24—H24 | 0.9300 |
C4—H4 | 0.9300 | C25—C32 | 1.377 (2) |
C5—C6 | 1.368 (3) | C25—C26 | 1.440 (2) |
C5—H5 | 0.9300 | C26—C27 | 1.401 (3) |
C6—C7 | 1.383 (3) | C26—C31 | 1.408 (2) |
C6—H6 | 0.9300 | C27—C28 | 1.377 (3) |
C7—H7 | 0.9300 | C27—H27 | 0.9300 |
C8—N3 | 1.289 (2) | C28—C29 | 1.397 (3) |
C8—C9 | 1.475 (2) | C28—H28 | 0.9300 |
C9—C14 | 1.380 (3) | C29—C30 | 1.371 (3) |
C9—C10 | 1.391 (2) | C29—H29 | 0.9300 |
C10—C11 | 1.381 (3) | C30—C31 | 1.394 (3) |
C10—H10 | 0.9300 | C30—H30 | 0.9300 |
C11—C12 | 1.365 (3) | C31—N6 | 1.384 (2) |
C11—H11 | 0.9300 | C32—N6 | 1.354 (2) |
C12—C13 | 1.359 (3) | C32—H32 | 0.9300 |
C12—H12 | 0.9300 | C33—N5 | 1.457 (2) |
C13—C14 | 1.387 (3) | C33—H33A | 0.9600 |
C13—H13 | 0.9300 | C33—H33B | 0.9600 |
C14—H14 | 0.9300 | C33—H33C | 0.9600 |
C15—N4 | 1.286 (2) | C34—N6 | 1.453 (2) |
C15—C16 | 1.434 (2) | C34—H34A | 0.9600 |
C15—H15 | 0.9300 | C34—H34B | 0.9600 |
C16—C23 | 1.380 (2) | C34—H34C | 0.9600 |
C16—C17 | 1.440 (3) | C35—C36i | 1.280 (7) |
C17—C18 | 1.402 (2) | C35—C36 | 1.280 (7) |
C17—C22 | 1.411 (2) | C35—H35A | 0.92 (2) |
C18—C19 | 1.376 (3) | C35—H35B | 0.93 (2) |
C18—H18 | 0.9300 | C35—H35Ai | 0.92 (2) |
C19—C20 | 1.399 (3) | C35—H35Bi | 0.93 (2) |
C19—H19 | 0.9300 | C36—N7 | 1.104 (7) |
C20—C21 | 1.374 (3) | N1—N2 | 1.4110 (19) |
C20—H20 | 0.9300 | N3—N4 | 1.4067 (19) |
| | | |
N1—C1—C2 | 119.59 (15) | N5—C23—H23 | 124.6 |
N1—C1—C8 | 123.36 (14) | C16—C23—H23 | 124.6 |
C2—C1—C8 | 116.93 (14) | N2—C24—C25 | 121.38 (16) |
C3—C2—C7 | 118.14 (16) | N2—C24—H24 | 119.3 |
C3—C2—C1 | 121.77 (16) | C25—C24—H24 | 119.3 |
C7—C2—C1 | 120.03 (16) | C32—C25—C24 | 124.65 (16) |
C2—C3—C4 | 120.1 (2) | C32—C25—C26 | 106.03 (15) |
C2—C3—H3 | 120.0 | C24—C25—C26 | 129.31 (15) |
C4—C3—H3 | 120.0 | C27—C26—C31 | 118.55 (17) |
C5—C4—C3 | 121.1 (2) | C27—C26—C25 | 134.91 (17) |
C5—C4—H4 | 119.4 | C31—C26—C25 | 106.54 (15) |
C3—C4—H4 | 119.4 | C28—C27—C26 | 118.6 (2) |
C4—C5—C6 | 119.4 (2) | C28—C27—H27 | 120.7 |
C4—C5—H5 | 120.3 | C26—C27—H27 | 120.7 |
C6—C5—H5 | 120.3 | C27—C28—C29 | 121.7 (2) |
C5—C6—C7 | 120.1 (2) | C27—C28—H28 | 119.2 |
C5—C6—H6 | 119.9 | C29—C28—H28 | 119.2 |
C7—C6—H6 | 119.9 | C30—C29—C28 | 121.3 (2) |
C6—C7—C2 | 121.1 (2) | C30—C29—H29 | 119.3 |
C6—C7—H7 | 119.4 | C28—C29—H29 | 119.3 |
C2—C7—H7 | 119.4 | C29—C30—C31 | 117.2 (2) |
N3—C8—C9 | 119.91 (15) | C29—C30—H30 | 121.4 |
N3—C8—C1 | 122.34 (14) | C31—C30—H30 | 121.4 |
C9—C8—C1 | 117.58 (13) | N6—C31—C30 | 129.16 (18) |
C14—C9—C10 | 118.14 (17) | N6—C31—C26 | 108.11 (15) |
C14—C9—C8 | 121.49 (16) | C30—C31—C26 | 122.72 (18) |
C10—C9—C8 | 120.27 (17) | N6—C32—C25 | 110.85 (16) |
C11—C10—C9 | 120.5 (2) | N6—C32—H32 | 124.6 |
C11—C10—H10 | 119.8 | C25—C32—H32 | 124.6 |
C9—C10—H10 | 119.8 | N5—C33—H33A | 109.5 |
C12—C11—C10 | 120.6 (2) | N5—C33—H33B | 109.5 |
C12—C11—H11 | 119.7 | H33A—C33—H33B | 109.5 |
C10—C11—H11 | 119.7 | N5—C33—H33C | 109.5 |
C13—C12—C11 | 119.5 (2) | H33A—C33—H33C | 109.5 |
C13—C12—H12 | 120.2 | H33B—C33—H33C | 109.5 |
C11—C12—H12 | 120.2 | N6—C34—H34A | 109.5 |
C12—C13—C14 | 120.8 (2) | N6—C34—H34B | 109.5 |
C12—C13—H13 | 119.6 | H34A—C34—H34B | 109.5 |
C14—C13—H13 | 119.6 | N6—C34—H34C | 109.5 |
C9—C14—C13 | 120.5 (2) | H34A—C34—H34C | 109.5 |
C9—C14—H14 | 119.8 | H34B—C34—H34C | 109.5 |
C13—C14—H14 | 119.8 | C36i—C35—C36 | 180.0 |
N4—C15—C16 | 121.41 (16) | C36i—C35—H35A | 96 (4) |
N4—C15—H15 | 119.3 | C36—C35—H35A | 84 (4) |
C16—C15—H15 | 119.3 | C36i—C35—H35B | 81 (8) |
C23—C16—C15 | 124.28 (17) | C36—C35—H35B | 99 (8) |
C23—C16—C17 | 106.21 (15) | H35A—C35—H35B | 86 (8) |
C15—C16—C17 | 129.43 (14) | C36i—C35—H35Ai | 84 (4) |
C18—C17—C22 | 118.62 (17) | C36—C35—H35Ai | 96 (4) |
C18—C17—C16 | 134.93 (16) | H35A—C35—H35Ai | 180.0 |
C22—C17—C16 | 106.42 (14) | H35B—C35—H35Ai | 94 (8) |
C19—C18—C17 | 118.58 (18) | C36i—C35—H35Bi | 99 (8) |
C19—C18—H18 | 120.7 | C36—C35—H35Bi | 81 (8) |
C17—C18—H18 | 120.7 | H35A—C35—H35Bi | 94 (8) |
C18—C19—C20 | 121.7 (2) | H35B—C35—H35Bi | 180 (6) |
C18—C19—H19 | 119.2 | H35Ai—C35—H35Bi | 86 (8) |
C20—C19—H19 | 119.2 | N7—C36—C35 | 173.2 (7) |
C21—C20—C19 | 121.1 (2) | C1—N1—N2 | 111.60 (14) |
C21—C20—H20 | 119.4 | C24—N2—N1 | 111.89 (14) |
C19—C20—H20 | 119.4 | C8—N3—N4 | 111.13 (13) |
C20—C21—C22 | 117.36 (19) | C15—N4—N3 | 112.23 (14) |
C20—C21—H21 | 121.3 | C23—N5—C22 | 108.75 (13) |
C22—C21—H21 | 121.3 | C23—N5—C33 | 125.59 (17) |
N5—C22—C21 | 129.47 (16) | C22—N5—C33 | 125.48 (17) |
N5—C22—C17 | 107.90 (16) | C32—N6—C31 | 108.47 (15) |
C21—C22—C17 | 122.60 (17) | C32—N6—C34 | 126.40 (17) |
N5—C23—C16 | 110.71 (17) | C31—N6—C34 | 125.10 (17) |
Symmetry code: (i) −x+2, −y, −z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C12—H12···N7ii | 0.93 | 2.51 | 3.372 (6) | 155 |
Symmetry code: (ii) −x+2, −y, −z+1. |
(1
Z,2
Z)-1,2-Bis{(
E)-[(naphthalen-1-yl)methylidene]hydrazinylidene}-1,2-diphenylethane (4-BDHFN)
top
Crystal data top
C36H26N4 | F(000) = 1080 |
Mr = 514.61 | Dx = 1.246 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
a = 26.195 (8) Å | Cell parameters from 380 reflections |
b = 9.809 (3) Å | θ = 2.5–26.0° |
c = 11.806 (4) Å | µ = 0.07 mm−1 |
β = 115.230 (5)° | T = 298 K |
V = 2744.2 (15) Å3 | Block, yellow |
Z = 4 | 0.30 × 0.16 × 0.10 mm |
Data collection top
Bruker SMART CCD area detector diffractometer | 2413 independent reflections |
Radiation source: fine-focus sealed tube | 1197 reflections with I > 2σ(I) |
Detector resolution: 10.22 pixels mm-1 | Rint = 0.058 |
phi and ω scans | θmax = 25.0°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −31→29 |
Tmin = 0.986, Tmax = 0.993 | k = −11→11 |
6631 measured reflections | l = −14→12 |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.062 | Only H-atom displacement parameters refined |
wR(F2) = 0.130 | w = 1/[σ2(Fo2) + (0.0447P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.95 | (Δ/σ)max < 0.001 |
2413 reflections | Δρmax = 0.11 e Å−3 |
194 parameters | Δρmin = −0.10 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and
goodness of fit S are based on F2, conventional R-factors R are based
on F, with F set to zero for negative F2. The threshold expression of
F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is
not relevant to the choice of reflections for refinement. R-factors based
on F2 are statistically about twice as large as those based on F, and R-
factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.47469 (10) | 0.0592 (3) | 0.1862 (2) | 0.0498 (7) | |
C2 | 0.42618 (10) | −0.0283 (3) | 0.1669 (2) | 0.0492 (7) | |
C3 | 0.38212 (11) | −0.0443 (3) | 0.0497 (3) | 0.0657 (8) | |
H3 | 0.382634 | 0.002388 | −0.018428 | 0.065 (8)* | |
C4 | 0.33781 (13) | −0.1281 (3) | 0.0331 (3) | 0.0816 (10) | |
H4 | 0.308409 | −0.137174 | −0.046358 | 0.075 (9)* | |
C5 | 0.33585 (14) | −0.1977 (3) | 0.1294 (3) | 0.0845 (10) | |
H5 | 0.305668 | −0.255394 | 0.116304 | 0.074 (9)* | |
C6 | 0.37835 (14) | −0.1830 (3) | 0.2459 (4) | 0.0864 (10) | |
H6 | 0.377201 | −0.229986 | 0.313221 | 0.097 (11)* | |
C7 | 0.42297 (12) | −0.0986 (3) | 0.2640 (3) | 0.0715 (9) | |
H7 | 0.451750 | −0.088900 | 0.344135 | 0.052 (7)* | |
C8 | 0.52380 (14) | 0.2815 (3) | 0.0423 (3) | 0.0670 (8) | |
H8 | 0.489868 | 0.285791 | −0.029219 | 0.085 (11)* | |
C9 | 0.56973 (13) | 0.3652 (3) | 0.0431 (3) | 0.0660 (8) | |
C10 | 0.55680 (17) | 0.4528 (3) | −0.0558 (3) | 0.0855 (10) | |
H10 | 0.520013 | 0.454005 | −0.118007 | 0.117 (14)* | |
C11 | 0.59585 (18) | 0.5391 (4) | −0.0671 (4) | 0.1027 (12) | |
H11 | 0.585478 | 0.598432 | −0.134758 | 0.100 (11)* | |
C12 | 0.65000 (19) | 0.5357 (4) | 0.0229 (4) | 0.1035 (12) | |
H12 | 0.676527 | 0.593874 | 0.015764 | 0.123 (13)* | |
C13 | 0.66715 (15) | 0.4466 (3) | 0.1267 (3) | 0.0799 (9) | |
C14 | 0.62661 (13) | 0.3581 (3) | 0.1381 (3) | 0.0635 (8) | |
C15 | 0.64564 (14) | 0.2666 (3) | 0.2393 (3) | 0.0694 (8) | |
H15 | 0.619942 | 0.207560 | 0.248826 | 0.077 (9)* | |
C16 | 0.70059 (14) | 0.2621 (4) | 0.3236 (3) | 0.0824 (10) | |
H16 | 0.712101 | 0.200221 | 0.389491 | 0.097 (12)* | |
C17 | 0.73971 (18) | 0.3498 (4) | 0.3116 (4) | 0.1014 (12) | |
H17 | 0.777285 | 0.346277 | 0.369719 | 0.112 (13)* | |
C18 | 0.72364 (17) | 0.4395 (4) | 0.2167 (4) | 0.1034 (12) | |
H18 | 0.750268 | 0.497894 | 0.210383 | 0.086 (10)* | |
N1 | 0.47400 (9) | 0.1318 (2) | 0.0954 (2) | 0.0609 (6) | |
N2 | 0.52522 (9) | 0.2036 (2) | 0.1286 (2) | 0.0634 (7) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0526 (17) | 0.0542 (16) | 0.0440 (15) | 0.0071 (13) | 0.0219 (13) | −0.0013 (13) |
C2 | 0.0451 (16) | 0.0574 (17) | 0.0440 (16) | 0.0016 (13) | 0.0179 (15) | −0.0031 (14) |
C3 | 0.0600 (19) | 0.084 (2) | 0.0522 (19) | −0.0039 (17) | 0.0225 (18) | −0.0002 (17) |
C4 | 0.054 (2) | 0.111 (3) | 0.070 (2) | −0.0156 (19) | 0.017 (2) | −0.017 (2) |
C5 | 0.065 (2) | 0.100 (3) | 0.095 (3) | −0.030 (2) | 0.040 (2) | −0.019 (2) |
C6 | 0.085 (3) | 0.096 (3) | 0.082 (3) | −0.025 (2) | 0.039 (2) | 0.006 (2) |
C7 | 0.062 (2) | 0.087 (2) | 0.056 (2) | −0.0173 (17) | 0.0163 (19) | 0.0009 (17) |
C8 | 0.072 (2) | 0.064 (2) | 0.065 (2) | 0.0010 (16) | 0.029 (2) | 0.0022 (16) |
C9 | 0.074 (2) | 0.0621 (19) | 0.068 (2) | −0.0001 (17) | 0.036 (2) | 0.0008 (17) |
C10 | 0.100 (3) | 0.081 (3) | 0.087 (3) | 0.000 (2) | 0.051 (3) | 0.022 (2) |
C11 | 0.123 (3) | 0.091 (3) | 0.108 (3) | 0.014 (3) | 0.063 (3) | 0.036 (3) |
C12 | 0.128 (3) | 0.084 (3) | 0.131 (4) | −0.009 (3) | 0.086 (3) | 0.019 (3) |
C13 | 0.087 (3) | 0.074 (2) | 0.094 (3) | −0.012 (2) | 0.053 (2) | −0.005 (2) |
C14 | 0.078 (2) | 0.0603 (19) | 0.064 (2) | −0.0020 (17) | 0.0415 (19) | −0.0036 (16) |
C15 | 0.065 (2) | 0.080 (2) | 0.067 (2) | −0.0083 (19) | 0.031 (2) | −0.0062 (17) |
C16 | 0.071 (2) | 0.096 (3) | 0.078 (2) | −0.005 (2) | 0.029 (2) | −0.004 (2) |
C17 | 0.076 (3) | 0.120 (4) | 0.110 (3) | −0.017 (2) | 0.040 (3) | −0.002 (3) |
C18 | 0.091 (3) | 0.103 (3) | 0.128 (4) | −0.028 (3) | 0.057 (3) | −0.004 (3) |
N1 | 0.0583 (15) | 0.0688 (16) | 0.0549 (15) | −0.0016 (13) | 0.0235 (13) | 0.0049 (12) |
N2 | 0.0633 (16) | 0.0688 (16) | 0.0597 (16) | −0.0061 (13) | 0.0278 (14) | 0.0139 (13) |
Geometric parameters (Å, º) top
C1—N1 | 1.280 (3) | C9—C14 | 1.434 (3) |
C1—C2 | 1.469 (3) | C10—C11 | 1.378 (4) |
C1—C1i | 1.525 (4) | C10—H10 | 0.9300 |
C2—C7 | 1.371 (3) | C11—C12 | 1.363 (4) |
C2—C3 | 1.382 (3) | C11—H11 | 0.9300 |
C3—C4 | 1.367 (4) | C12—C13 | 1.414 (4) |
C3—H3 | 0.9300 | C12—H12 | 0.9300 |
C4—C5 | 1.346 (4) | C13—C18 | 1.409 (4) |
C4—H4 | 0.9300 | C13—C14 | 1.422 (4) |
C5—C6 | 1.359 (4) | C14—C15 | 1.406 (4) |
C5—H5 | 0.9300 | C15—C16 | 1.357 (4) |
C6—C7 | 1.373 (4) | C15—H15 | 0.9300 |
C6—H6 | 0.9300 | C16—C17 | 1.390 (4) |
C7—H7 | 0.9300 | C16—H16 | 0.9300 |
C8—N2 | 1.261 (3) | C17—C18 | 1.343 (4) |
C8—C9 | 1.453 (4) | C17—H17 | 0.9300 |
C8—H8 | 0.9300 | C18—H18 | 0.9300 |
C9—C10 | 1.371 (4) | N1—N2 | 1.415 (3) |
| | | |
N1—C1—C2 | 119.5 (2) | C9—C10—H10 | 118.5 |
N1—C1—C1i | 121.5 (2) | C11—C10—H10 | 118.5 |
C2—C1—C1i | 118.9 (2) | C12—C11—C10 | 118.6 (4) |
C7—C2—C3 | 117.3 (3) | C12—C11—H11 | 120.7 |
C7—C2—C1 | 121.5 (2) | C10—C11—H11 | 120.7 |
C3—C2—C1 | 121.3 (3) | C11—C12—C13 | 122.1 (4) |
C4—C3—C2 | 120.5 (3) | C11—C12—H12 | 118.9 |
C4—C3—H3 | 119.8 | C13—C12—H12 | 118.9 |
C2—C3—H3 | 119.8 | C18—C13—C12 | 121.9 (4) |
C5—C4—C3 | 121.3 (3) | C18—C13—C14 | 119.0 (3) |
C5—C4—H4 | 119.3 | C12—C13—C14 | 119.0 (3) |
C3—C4—H4 | 119.3 | C15—C14—C13 | 117.5 (3) |
C4—C5—C6 | 119.4 (3) | C15—C14—C9 | 124.7 (3) |
C4—C5—H5 | 120.3 | C13—C14—C9 | 117.7 (3) |
C6—C5—H5 | 120.3 | C16—C15—C14 | 121.6 (3) |
C5—C6—C7 | 119.8 (3) | C16—C15—H15 | 119.2 |
C5—C6—H6 | 120.1 | C14—C15—H15 | 119.2 |
C7—C6—H6 | 120.1 | C15—C16—C17 | 120.2 (4) |
C2—C7—C6 | 121.7 (3) | C15—C16—H16 | 119.9 |
C2—C7—H7 | 119.2 | C17—C16—H16 | 119.9 |
C6—C7—H7 | 119.2 | C18—C17—C16 | 120.5 (4) |
N2—C8—C9 | 126.7 (3) | C18—C17—H17 | 119.8 |
N2—C8—H8 | 116.7 | C16—C17—H17 | 119.8 |
C9—C8—H8 | 116.7 | C17—C18—C13 | 121.1 (4) |
C10—C9—C14 | 119.5 (3) | C17—C18—H18 | 119.4 |
C10—C9—C8 | 116.4 (3) | C13—C18—H18 | 119.4 |
C14—C9—C8 | 124.0 (3) | C1—N1—N2 | 111.8 (2) |
C9—C10—C11 | 123.0 (4) | C8—N2—N1 | 112.3 (2) |
Symmetry code: (i) −x+1, y, −z+1/2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C15—H15···N2 | 0.93 | 2.27 | 2.920 (4) | 126 |
(
Z)-2-{(
E)-[(1
H-Indol-3-yl)methylidene]hydrazinylidene}-\
1,2-diphenylethanone (5-BMHFI)
top
Crystal data top
C23H17N3O | Dx = 1.243 Mg m−3 |
Mr = 351.39 | Melting point: 470.4 K |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.8767 (1) Å | Cell parameters from 380 reflections |
b = 8.3698 (2) Å | θ = 2.5–26.0° |
c = 32.6317 (6) Å | µ = 0.08 mm−1 |
V = 1878.17 (6) Å3 | T = 293 K |
Z = 4 | Needle, yellow |
F(000) = 736 | 0.35 × 0.1 × 0.09 mm |
Data collection top
Bruker SMART CCD area detector diffractometer | 3641 independent reflections |
Radiation source: fine-focus sealed tube | 3444 reflections with I > 2σ(I) |
Detector resolution: 10.11 pixels mm-1 | Rint = 0.023 |
phi and ω scans | θmax = 26.1°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −7→8 |
Tmin = 0.903, Tmax = 0.939 | k = −10→10 |
10418 measured reflections | l = −39→40 |
Refinement top
Refinement on F2 | Only H-atom displacement parameters refined |
Least-squares matrix: full | w = 1/[σ2(Fo2) + (0.0555P)2 + 0.1425P] where P = (Fo2 + 2Fc2)/3 |
R[F2 > 2σ(F2)] = 0.035 | (Δ/σ)max = 0.001 |
wR(F2) = 0.096 | Δρmax = 0.15 e Å−3 |
S = 1.02 | Δρmin = −0.13 e Å−3 |
3641 reflections | Extinction correction: SHELXL2016 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
262 parameters | Extinction coefficient: 0.014 (2) |
0 restraints | Absolute structure: Flack x determined using 1312 quotients [(I+)-(I-)]/[(I+)+(I-)]
(Parsons et al., 2013) The diffraction data did not permit a clear determination of the absolute
structure. |
Hydrogen site location: inferred from neighbouring sites | Absolute structure parameter: −1.4 (6) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and
goodness of fit S are based on F2, conventional R-factors R are based
on F, with F set to zero for negative F2. The threshold expression of
F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is
not relevant to the choice of reflections for refinement. R-factors based
on F2 are statistically about twice as large as those based on F, and R-
factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.7517 (3) | 0.2656 (2) | 0.85621 (6) | 0.0427 (4) | |
C2 | 0.8141 (3) | 0.1859 (2) | 0.81814 (6) | 0.0470 (4) | |
C3 | 1.0008 (4) | 0.1258 (3) | 0.81425 (7) | 0.0669 (6) | |
H3 | 1.089269 | 0.138070 | 0.835570 | 0.076 (8)* | |
C4 | 1.0561 (5) | 0.0477 (4) | 0.77895 (9) | 0.0874 (9) | |
H4 | 1.181704 | 0.007482 | 0.776671 | 0.106 (11)* | |
C5 | 0.9281 (5) | 0.0289 (4) | 0.74721 (9) | 0.0923 (10) | |
H5 | 0.966311 | −0.024678 | 0.723578 | 0.102 (10)* | |
C6 | 0.7443 (5) | 0.0890 (4) | 0.75035 (8) | 0.0843 (9) | |
H6 | 0.657486 | 0.076835 | 0.728722 | 0.100 (10)* | |
C7 | 0.6864 (4) | 0.1677 (3) | 0.78550 (7) | 0.0636 (6) | |
H7 | 0.561082 | 0.208836 | 0.787316 | 0.062 (7)* | |
C8 | 0.5398 (3) | 0.3144 (2) | 0.86038 (5) | 0.0423 (4) | |
C9 | 0.4897 (3) | 0.4854 (3) | 0.85595 (6) | 0.0494 (5) | |
C10 | 0.2996 (4) | 0.5330 (4) | 0.86342 (7) | 0.0711 (7) | |
H10 | 0.205386 | 0.458336 | 0.870592 | 0.079 (9)* | |
C11 | 0.2525 (7) | 0.6924 (5) | 0.86005 (11) | 0.1074 (13) | |
H11 | 0.125781 | 0.725582 | 0.865180 | 0.136 (15)* | |
C12 | 0.3901 (8) | 0.8024 (4) | 0.84926 (12) | 0.1188 (16) | |
H12 | 0.356149 | 0.909601 | 0.847176 | 0.119 (12)* | |
C13 | 0.5766 (7) | 0.7565 (4) | 0.84152 (11) | 0.1043 (12) | |
H13 | 0.669543 | 0.831779 | 0.834033 | 0.160 (18)* | |
C14 | 0.6268 (4) | 0.5965 (3) | 0.84490 (8) | 0.0704 (7) | |
H14 | 0.753805 | 0.564317 | 0.839654 | 0.079 (9)* | |
C15 | 0.8754 (3) | 0.3567 (2) | 0.95253 (6) | 0.0472 (4) | |
H15 | 1.003366 | 0.321156 | 0.951208 | 0.050 (6)* | |
C16 | 0.7994 (3) | 0.4113 (2) | 0.99091 (6) | 0.0457 (4) | |
C17 | 0.6165 (3) | 0.4884 (2) | 1.00009 (6) | 0.0438 (4) | |
C18 | 0.4611 (3) | 0.5458 (2) | 0.97686 (7) | 0.0521 (5) | |
H18 | 0.462304 | 0.536961 | 0.948449 | 0.058 (6)* | |
C19 | 0.3066 (4) | 0.6156 (3) | 0.99655 (8) | 0.0646 (6) | |
H19 | 0.203049 | 0.654739 | 0.981207 | 0.073 (7)* | |
C20 | 0.3018 (4) | 0.6290 (3) | 1.03919 (8) | 0.0685 (6) | |
H20 | 0.195263 | 0.676936 | 1.051704 | 0.074 (8)* | |
C21 | 0.4506 (4) | 0.5730 (3) | 1.06286 (7) | 0.0614 (6) | |
H21 | 0.446523 | 0.580472 | 1.091284 | 0.068 (7)* | |
C22 | 0.6087 (3) | 0.5045 (2) | 1.04290 (6) | 0.0490 (5) | |
C23 | 0.8892 (3) | 0.3850 (3) | 1.02803 (6) | 0.0558 (5) | |
H23 | 1.009720 | 0.336291 | 1.031394 | 0.063 (7)* | |
N1 | 0.8691 (2) | 0.2859 (2) | 0.88638 (5) | 0.0493 (4) | |
N2 | 0.7709 (2) | 0.3555 (2) | 0.91982 (5) | 0.0481 (4) | |
N3 | 0.7772 (3) | 0.4399 (2) | 1.05867 (5) | 0.0580 (5) | |
H24 | 0.806292 | 0.435508 | 1.084278 | 0.087 (9)* | |
O1 | 0.4184 (2) | 0.21208 (19) | 0.86624 (5) | 0.0593 (4) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0455 (9) | 0.0417 (9) | 0.0410 (9) | 0.0001 (8) | 0.0002 (8) | 0.0052 (7) |
C2 | 0.0552 (11) | 0.0454 (10) | 0.0403 (9) | 0.0018 (9) | 0.0022 (8) | 0.0040 (8) |
C3 | 0.0636 (13) | 0.0814 (16) | 0.0558 (12) | 0.0192 (13) | 0.0002 (11) | −0.0060 (12) |
C4 | 0.0847 (19) | 0.106 (2) | 0.0712 (16) | 0.0347 (18) | 0.0091 (14) | −0.0160 (15) |
C5 | 0.115 (2) | 0.105 (2) | 0.0569 (14) | 0.026 (2) | 0.0091 (16) | −0.0225 (14) |
C6 | 0.095 (2) | 0.111 (2) | 0.0468 (12) | 0.0072 (19) | −0.0077 (13) | −0.0148 (13) |
C7 | 0.0627 (14) | 0.0796 (16) | 0.0486 (11) | 0.0074 (12) | −0.0031 (10) | −0.0037 (11) |
C8 | 0.0438 (9) | 0.0491 (10) | 0.0342 (8) | −0.0034 (8) | 0.0009 (7) | 0.0032 (7) |
C9 | 0.0552 (10) | 0.0531 (11) | 0.0400 (9) | 0.0087 (9) | −0.0072 (8) | −0.0021 (8) |
C10 | 0.0679 (14) | 0.0868 (18) | 0.0585 (13) | 0.0256 (15) | −0.0039 (11) | −0.0098 (12) |
C11 | 0.117 (3) | 0.108 (3) | 0.097 (2) | 0.069 (2) | −0.023 (2) | −0.030 (2) |
C12 | 0.181 (4) | 0.0616 (18) | 0.114 (3) | 0.048 (3) | −0.063 (3) | −0.0235 (19) |
C13 | 0.150 (3) | 0.0520 (15) | 0.111 (3) | −0.002 (2) | −0.043 (3) | 0.0109 (15) |
C14 | 0.0793 (17) | 0.0521 (12) | 0.0798 (16) | −0.0026 (12) | −0.0157 (14) | 0.0109 (11) |
C15 | 0.0434 (9) | 0.0473 (10) | 0.0509 (10) | 0.0047 (9) | −0.0062 (8) | −0.0019 (8) |
C16 | 0.0475 (10) | 0.0425 (9) | 0.0469 (9) | 0.0014 (8) | −0.0118 (8) | −0.0030 (8) |
C17 | 0.0496 (10) | 0.0350 (8) | 0.0467 (9) | −0.0023 (8) | −0.0065 (8) | −0.0021 (7) |
C18 | 0.0551 (11) | 0.0477 (10) | 0.0535 (11) | 0.0026 (9) | −0.0131 (9) | 0.0002 (9) |
C19 | 0.0568 (13) | 0.0599 (13) | 0.0770 (15) | 0.0121 (11) | −0.0091 (12) | −0.0001 (11) |
C20 | 0.0628 (14) | 0.0628 (14) | 0.0798 (16) | 0.0096 (12) | 0.0087 (13) | −0.0073 (12) |
C21 | 0.0763 (15) | 0.0548 (12) | 0.0531 (12) | 0.0016 (12) | 0.0053 (11) | −0.0072 (10) |
C22 | 0.0602 (12) | 0.0402 (10) | 0.0466 (10) | 0.0005 (9) | −0.0058 (9) | −0.0012 (8) |
C23 | 0.0575 (12) | 0.0551 (11) | 0.0548 (11) | 0.0090 (10) | −0.0158 (10) | −0.0058 (9) |
N1 | 0.0456 (9) | 0.0585 (10) | 0.0437 (8) | 0.0059 (8) | −0.0012 (7) | −0.0030 (7) |
N2 | 0.0450 (8) | 0.0569 (9) | 0.0424 (8) | 0.0056 (8) | −0.0019 (7) | −0.0038 (7) |
N3 | 0.0738 (12) | 0.0595 (10) | 0.0407 (9) | 0.0084 (10) | −0.0158 (8) | −0.0051 (7) |
O1 | 0.0542 (8) | 0.0652 (9) | 0.0586 (9) | −0.0152 (8) | 0.0019 (7) | 0.0079 (7) |
Geometric parameters (Å, º) top
C1—N1 | 1.284 (3) | C13—C14 | 1.387 (4) |
C1—C2 | 1.474 (3) | C13—H13 | 0.9300 |
C1—C8 | 1.520 (3) | C14—H14 | 0.9300 |
C2—C3 | 1.385 (3) | C15—N2 | 1.287 (2) |
C2—C7 | 1.389 (3) | C15—C16 | 1.432 (3) |
C3—C4 | 1.378 (4) | C15—H15 | 0.9300 |
C3—H3 | 0.9300 | C16—C23 | 1.377 (3) |
C4—C5 | 1.368 (4) | C16—C17 | 1.445 (3) |
C4—H4 | 0.9300 | C17—C18 | 1.395 (3) |
C5—C6 | 1.364 (4) | C17—C22 | 1.404 (3) |
C5—H5 | 0.9300 | C18—C19 | 1.372 (3) |
C6—C7 | 1.381 (3) | C18—H18 | 0.9300 |
C6—H6 | 0.9300 | C19—C20 | 1.396 (4) |
C7—H7 | 0.9300 | C19—H19 | 0.9300 |
C8—O1 | 1.211 (2) | C20—C21 | 1.365 (3) |
C8—C9 | 1.479 (3) | C20—H20 | 0.9300 |
C9—C14 | 1.372 (3) | C21—C22 | 1.391 (3) |
C9—C10 | 1.388 (3) | C21—H21 | 0.9300 |
C10—C11 | 1.378 (5) | C22—N3 | 1.378 (3) |
C10—H10 | 0.9300 | C23—N3 | 1.343 (3) |
C11—C12 | 1.366 (6) | C23—H23 | 0.9300 |
C11—H11 | 0.9300 | N1—N2 | 1.410 (2) |
C12—C13 | 1.362 (6) | N3—H24 | 0.8600 |
C12—H12 | 0.9300 | | |
| | | |
N1—C1—C2 | 121.53 (18) | C12—C13—H13 | 120.3 |
N1—C1—C8 | 119.90 (17) | C14—C13—H13 | 120.3 |
C2—C1—C8 | 118.45 (16) | C9—C14—C13 | 120.3 (3) |
C3—C2—C7 | 118.4 (2) | C9—C14—H14 | 119.9 |
C3—C2—C1 | 120.79 (19) | C13—C14—H14 | 119.9 |
C7—C2—C1 | 120.79 (19) | N2—C15—C16 | 121.61 (18) |
C4—C3—C2 | 120.3 (2) | N2—C15—H15 | 119.2 |
C4—C3—H3 | 119.8 | C16—C15—H15 | 119.2 |
C2—C3—H3 | 119.8 | C23—C16—C15 | 123.68 (18) |
C5—C4—C3 | 120.7 (3) | C23—C16—C17 | 106.22 (17) |
C5—C4—H4 | 119.7 | C15—C16—C17 | 129.90 (17) |
C3—C4—H4 | 119.7 | C18—C17—C22 | 118.56 (18) |
C6—C5—C4 | 119.8 (3) | C18—C17—C16 | 135.04 (18) |
C6—C5—H5 | 120.1 | C22—C17—C16 | 106.40 (17) |
C4—C5—H5 | 120.1 | C19—C18—C17 | 119.0 (2) |
C5—C6—C7 | 120.3 (3) | C19—C18—H18 | 120.5 |
C5—C6—H6 | 119.8 | C17—C18—H18 | 120.5 |
C7—C6—H6 | 119.8 | C18—C19—C20 | 121.3 (2) |
C6—C7—C2 | 120.5 (2) | C18—C19—H19 | 119.4 |
C6—C7—H7 | 119.8 | C20—C19—H19 | 119.4 |
C2—C7—H7 | 119.8 | C21—C20—C19 | 121.3 (2) |
O1—C8—C9 | 122.64 (19) | C21—C20—H20 | 119.4 |
O1—C8—C1 | 119.01 (18) | C19—C20—H20 | 119.4 |
C9—C8—C1 | 118.33 (17) | C20—C21—C22 | 117.5 (2) |
C14—C9—C10 | 119.9 (2) | C20—C21—H21 | 121.2 |
C14—C9—C8 | 121.4 (2) | C22—C21—H21 | 121.2 |
C10—C9—C8 | 118.7 (2) | N3—C22—C21 | 130.1 (2) |
C11—C10—C9 | 119.0 (3) | N3—C22—C17 | 107.56 (18) |
C11—C10—H10 | 120.5 | C21—C22—C17 | 122.37 (19) |
C9—C10—H10 | 120.5 | N3—C23—C16 | 110.04 (18) |
C12—C11—C10 | 120.7 (4) | N3—C23—H23 | 125.0 |
C12—C11—H11 | 119.7 | C16—C23—H23 | 125.0 |
C10—C11—H11 | 119.7 | C1—N1—N2 | 110.30 (16) |
C13—C12—C11 | 120.7 (3) | C15—N2—N1 | 112.19 (16) |
C13—C12—H12 | 119.7 | C23—N3—C22 | 109.78 (17) |
C11—C12—H12 | 119.7 | C23—N3—H24 | 125.1 |
C12—C13—C14 | 119.4 (4) | C22—N3—H24 | 125.1 |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C3—H3···O1i | 0.93 | 2.55 | 3.413 (3) | 154 |
N3—H24···O1ii | 0.86 | 2.17 | 2.927 (2) | 146 |
Symmetry codes: (i) x+1, y, z; (ii) x+1/2, −y+1/2, −z+2. |
(
Z)-2-{(
E)-[1-(1
H-Indol-3-yl)ethylidene]hydrazinylidene}-\
1,2-diphenylethanone (6-BMHAI)
top
Crystal data top
C24H19N3O | Dx = 1.271 Mg m−3 |
Mr = 365.42 | Mo Kα radiation, λ = 0.71073 Å |
Tetragonal, P43212 | Cell parameters from 380 reflections |
a = 8.3580 (1) Å | θ = 2.5–26.0° |
c = 54.6705 (7) Å | µ = 0.08 mm−1 |
V = 3819.07 (10) Å3 | T = 293 K |
Z = 8 | Needle, yellow |
F(000) = 1536 | 0.3 × 0.1 × 0.1 mm |
Data collection top
Bruker SMART CCD area detector diffractometer | 3759 independent reflections |
Radiation source: fine-focus sealed tube | 3565 reflections with I > 2σ(I) |
Detector resolution: 10.32 pixels mm-1 | Rint = 0.030 |
phi and ω scans | θmax = 26.0°, θmin = 1.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −6→10 |
Tmin = 0.983, Tmax = 0.998 | k = −9→9 |
21746 measured reflections | l = −66→66 |
Refinement top
Refinement on F2 | Only H-atom displacement parameters refined |
Least-squares matrix: full | w = 1/[σ2(Fo2) + (0.0638P)2 + 0.5669P] where P = (Fo2 + 2Fc2)/3 |
R[F2 > 2σ(F2)] = 0.041 | (Δ/σ)max < 0.001 |
wR(F2) = 0.113 | Δρmax = 0.16 e Å−3 |
S = 1.06 | Δρmin = −0.12 e Å−3 |
3759 reflections | Extinction correction: SHELXL2016 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
274 parameters | Extinction coefficient: 0.0060 (10) |
0 restraints | Absolute structure: Flack x determined using 1258 quotients [(I+)-(I-)]/[(I+)+(I-)]
(Parsons et al., 2013) The diffraction data did not permit a clear determination of the absolute
structure. |
Hydrogen site location: inferred from neighbouring sites | Absolute structure parameter: −1.5 (6) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and
goodness of fit S are based on F2, conventional R-factors R are based
on F, with F set to zero for negative F2. The threshold expression of
F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is
not relevant to the choice of reflections for refinement. R-factors based
on F2 are statistically about twice as large as those based on F, and R-
factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 1.1474 (3) | 0.3991 (2) | 0.03774 (4) | 0.0375 (4) | |
C2 | 1.0797 (3) | 0.4604 (2) | 0.01468 (4) | 0.0399 (5) | |
C3 | 1.1757 (3) | 0.5262 (3) | −0.00339 (4) | 0.0536 (6) | |
H3 | 1.285832 | 0.530978 | −0.001107 | 0.093 (11)* | |
C4 | 1.1095 (4) | 0.5845 (4) | −0.02472 (4) | 0.0638 (7) | |
H4 | 1.175243 | 0.629370 | −0.036611 | 0.085 (10)* | |
C5 | 0.9483 (4) | 0.5770 (4) | −0.02850 (5) | 0.0702 (8) | |
H5 | 0.904020 | 0.618015 | −0.042792 | 0.112 (13)* | |
C6 | 0.8528 (4) | 0.5092 (5) | −0.01127 (6) | 0.0887 (12) | |
H6 | 0.743289 | 0.501715 | −0.014035 | 0.134 (16)* | |
C7 | 0.9165 (3) | 0.4509 (4) | 0.01037 (5) | 0.0688 (8) | |
H7 | 0.849569 | 0.405348 | 0.022041 | 0.080 (10)* | |
C8 | 1.0347 (3) | 0.3189 (2) | 0.05573 (3) | 0.0357 (4) | |
C9 | 1.0165 (3) | 0.1422 (3) | 0.05565 (4) | 0.0385 (5) | |
C10 | 0.9186 (3) | 0.0725 (3) | 0.07313 (4) | 0.0485 (6) | |
H10 | 0.865994 | 0.135854 | 0.084567 | 0.064 (9)* | |
C11 | 0.8998 (4) | −0.0923 (3) | 0.07344 (5) | 0.0639 (7) | |
H11 | 0.834722 | −0.139926 | 0.085166 | 0.107 (13)* | |
C12 | 0.9768 (4) | −0.1849 (3) | 0.05651 (6) | 0.0740 (9) | |
H12 | 0.963375 | −0.295330 | 0.056759 | 0.110 (13)* | |
C13 | 1.0735 (4) | −0.1166 (3) | 0.03917 (7) | 0.0765 (9) | |
H13 | 1.125833 | −0.180829 | 0.027809 | 0.097 (12)* | |
C14 | 1.0937 (3) | 0.0485 (3) | 0.03852 (5) | 0.0565 (6) | |
H14 | 1.158469 | 0.095295 | 0.026686 | 0.061 (8)* | |
C15 | 1.4732 (2) | 0.3899 (3) | 0.07414 (4) | 0.0394 (5) | |
C16 | 1.5313 (2) | 0.2955 (3) | 0.09468 (4) | 0.0396 (5) | |
C17 | 1.4917 (2) | 0.1302 (3) | 0.09979 (4) | 0.0383 (5) | |
C18 | 1.3983 (3) | 0.0148 (3) | 0.08826 (4) | 0.0462 (5) | |
H18 | 1.342170 | 0.039309 | 0.074057 | 0.064 (8)* | |
C19 | 1.3903 (4) | −0.1359 (3) | 0.09820 (5) | 0.0614 (7) | |
H19 | 1.327760 | −0.213486 | 0.090633 | 0.071 (9)* | |
C20 | 1.4748 (5) | −0.1750 (4) | 0.11958 (5) | 0.0710 (9) | |
H20 | 1.467785 | −0.278356 | 0.125807 | 0.094 (11)* | |
C21 | 1.5667 (4) | −0.0651 (4) | 0.13138 (5) | 0.0661 (8) | |
H21 | 1.622214 | −0.091123 | 0.145572 | 0.097 (12)* | |
C22 | 1.5744 (3) | 0.0886 (3) | 0.12134 (4) | 0.0487 (6) | |
C23 | 1.6341 (3) | 0.3418 (3) | 0.11298 (5) | 0.0534 (6) | |
H23 | 1.679950 | 0.442841 | 0.114289 | 0.073 (9)* | |
C24 | 1.5707 (3) | 0.5277 (3) | 0.06510 (5) | 0.0569 (7) | |
H24A | 1.667158 | 0.535719 | 0.074549 | 0.156 (19)* | |
H24B | 1.510208 | 0.624774 | 0.066728 | 0.18 (2)* | |
H24C | 1.597308 | 0.511150 | 0.048203 | 0.121 (15)* | |
N1 | 1.2956 (2) | 0.4223 (2) | 0.04307 (3) | 0.0462 (5) | |
N2 | 1.3383 (2) | 0.3443 (2) | 0.06501 (3) | 0.0455 (5) | |
N3 | 1.6592 (3) | 0.2208 (3) | 0.12874 (4) | 0.0609 (6) | |
H25 | 1.719109 | 0.225541 | 0.141506 | 0.074 (10)* | |
O1 | 0.9581 (2) | 0.4039 (2) | 0.06942 (3) | 0.0527 (4) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0424 (11) | 0.0314 (10) | 0.0386 (10) | 0.0004 (8) | −0.0045 (9) | 0.0036 (8) |
C2 | 0.0495 (12) | 0.0335 (10) | 0.0367 (10) | 0.0004 (9) | −0.0053 (9) | 0.0043 (8) |
C3 | 0.0571 (15) | 0.0570 (15) | 0.0468 (12) | −0.0025 (11) | 0.0007 (11) | 0.0080 (11) |
C4 | 0.085 (2) | 0.0643 (17) | 0.0427 (12) | −0.0019 (15) | 0.0041 (13) | 0.0151 (12) |
C5 | 0.085 (2) | 0.079 (2) | 0.0462 (13) | 0.0060 (17) | −0.0175 (14) | 0.0186 (13) |
C6 | 0.0621 (19) | 0.136 (4) | 0.0682 (18) | 0.003 (2) | −0.0228 (16) | 0.035 (2) |
C7 | 0.0510 (15) | 0.101 (2) | 0.0540 (14) | −0.0045 (15) | −0.0100 (12) | 0.0274 (15) |
C8 | 0.0386 (10) | 0.0359 (10) | 0.0326 (8) | 0.0017 (8) | −0.0067 (8) | 0.0027 (8) |
C9 | 0.0420 (11) | 0.0354 (10) | 0.0380 (9) | −0.0012 (8) | −0.0074 (9) | 0.0031 (8) |
C10 | 0.0533 (13) | 0.0490 (13) | 0.0433 (11) | −0.0057 (10) | −0.0038 (10) | 0.0080 (10) |
C11 | 0.0720 (18) | 0.0547 (15) | 0.0649 (15) | −0.0184 (14) | −0.0094 (14) | 0.0209 (13) |
C12 | 0.087 (2) | 0.0362 (14) | 0.098 (2) | −0.0104 (14) | −0.0130 (19) | 0.0024 (15) |
C13 | 0.090 (2) | 0.0446 (15) | 0.095 (2) | −0.0013 (15) | 0.0128 (19) | −0.0203 (15) |
C14 | 0.0642 (16) | 0.0440 (13) | 0.0614 (14) | −0.0059 (12) | 0.0087 (13) | −0.0086 (11) |
C15 | 0.0322 (10) | 0.0393 (11) | 0.0467 (10) | 0.0002 (8) | −0.0004 (9) | 0.0020 (9) |
C16 | 0.0311 (10) | 0.0456 (12) | 0.0420 (10) | 0.0012 (9) | −0.0029 (9) | 0.0015 (9) |
C17 | 0.0336 (10) | 0.0460 (12) | 0.0354 (9) | 0.0072 (8) | 0.0017 (8) | 0.0040 (8) |
C18 | 0.0480 (12) | 0.0470 (12) | 0.0437 (11) | −0.0002 (10) | 0.0013 (9) | 0.0032 (9) |
C19 | 0.0777 (19) | 0.0472 (14) | 0.0593 (14) | −0.0006 (13) | 0.0133 (14) | 0.0079 (12) |
C20 | 0.104 (3) | 0.0494 (15) | 0.0602 (15) | 0.0214 (16) | 0.0204 (17) | 0.0186 (13) |
C21 | 0.083 (2) | 0.0711 (19) | 0.0446 (13) | 0.0318 (16) | 0.0022 (13) | 0.0160 (13) |
C22 | 0.0447 (13) | 0.0619 (15) | 0.0395 (11) | 0.0159 (11) | −0.0005 (9) | 0.0034 (10) |
C23 | 0.0412 (13) | 0.0594 (15) | 0.0597 (13) | −0.0011 (11) | −0.0118 (11) | −0.0079 (12) |
C24 | 0.0482 (14) | 0.0501 (14) | 0.0723 (17) | −0.0120 (12) | 0.0006 (13) | 0.0104 (13) |
N1 | 0.0433 (10) | 0.0463 (11) | 0.0489 (10) | −0.0053 (8) | −0.0090 (8) | 0.0139 (9) |
N2 | 0.0409 (10) | 0.0468 (11) | 0.0489 (10) | −0.0065 (8) | −0.0108 (8) | 0.0144 (8) |
N3 | 0.0518 (12) | 0.0784 (16) | 0.0525 (11) | 0.0118 (11) | −0.0218 (10) | −0.0041 (11) |
O1 | 0.0628 (11) | 0.0440 (9) | 0.0512 (9) | 0.0070 (8) | 0.0083 (8) | −0.0033 (7) |
Geometric parameters (Å, º) top
C1—N1 | 1.287 (3) | C13—H13 | 0.9300 |
C1—C2 | 1.474 (3) | C14—H14 | 0.9300 |
C1—C8 | 1.518 (3) | C15—N2 | 1.290 (3) |
C2—C3 | 1.386 (3) | C15—C16 | 1.456 (3) |
C2—C7 | 1.386 (4) | C15—C24 | 1.495 (3) |
C3—C4 | 1.380 (3) | C16—C23 | 1.375 (3) |
C3—H3 | 0.9300 | C16—C17 | 1.448 (3) |
C4—C5 | 1.365 (4) | C17—C18 | 1.392 (3) |
C4—H4 | 0.9300 | C17—C22 | 1.409 (3) |
C5—C6 | 1.358 (4) | C18—C19 | 1.373 (3) |
C5—H5 | 0.9300 | C18—H18 | 0.9300 |
C6—C7 | 1.386 (4) | C19—C20 | 1.404 (4) |
C6—H6 | 0.9300 | C19—H19 | 0.9300 |
C7—H7 | 0.9300 | C20—C21 | 1.360 (5) |
C8—O1 | 1.214 (3) | C20—H20 | 0.9300 |
C8—C9 | 1.485 (3) | C21—C22 | 1.399 (4) |
C9—C14 | 1.381 (3) | C21—H21 | 0.9300 |
C9—C10 | 1.386 (3) | C22—N3 | 1.373 (4) |
C10—C11 | 1.387 (4) | C23—N3 | 1.345 (4) |
C10—H10 | 0.9300 | C23—H23 | 0.9300 |
C11—C12 | 1.367 (5) | C24—H24A | 0.9600 |
C11—H11 | 0.9300 | C24—H24B | 0.9600 |
C12—C13 | 1.370 (5) | C24—H24C | 0.9600 |
C12—H12 | 0.9300 | N1—N2 | 1.411 (2) |
C13—C14 | 1.391 (4) | N3—H25 | 0.8600 |
| | | |
N1—C1—C2 | 120.7 (2) | C9—C14—H14 | 120.4 |
N1—C1—C8 | 121.11 (18) | C13—C14—H14 | 120.4 |
C2—C1—C8 | 118.00 (18) | N2—C15—C16 | 115.46 (19) |
C3—C2—C7 | 118.1 (2) | N2—C15—C24 | 125.1 (2) |
C3—C2—C1 | 121.7 (2) | C16—C15—C24 | 119.4 (2) |
C7—C2—C1 | 120.2 (2) | C23—C16—C17 | 105.7 (2) |
C4—C3—C2 | 120.7 (3) | C23—C16—C15 | 128.1 (2) |
C4—C3—H3 | 119.7 | C17—C16—C15 | 126.14 (19) |
C2—C3—H3 | 119.7 | C18—C17—C22 | 118.9 (2) |
C5—C4—C3 | 120.5 (3) | C18—C17—C16 | 134.59 (19) |
C5—C4—H4 | 119.8 | C22—C17—C16 | 106.5 (2) |
C3—C4—H4 | 119.8 | C19—C18—C17 | 118.9 (2) |
C6—C5—C4 | 119.6 (2) | C19—C18—H18 | 120.5 |
C6—C5—H5 | 120.2 | C17—C18—H18 | 120.5 |
C4—C5—H5 | 120.2 | C18—C19—C20 | 121.2 (3) |
C5—C6—C7 | 120.9 (3) | C18—C19—H19 | 119.4 |
C5—C6—H6 | 119.6 | C20—C19—H19 | 119.4 |
C7—C6—H6 | 119.6 | C21—C20—C19 | 121.4 (3) |
C6—C7—C2 | 120.2 (3) | C21—C20—H20 | 119.3 |
C6—C7—H7 | 119.9 | C19—C20—H20 | 119.3 |
C2—C7—H7 | 119.9 | C20—C21—C22 | 117.4 (2) |
O1—C8—C9 | 122.0 (2) | C20—C21—H21 | 121.3 |
O1—C8—C1 | 117.96 (19) | C22—C21—H21 | 121.3 |
C9—C8—C1 | 120.03 (18) | N3—C22—C21 | 130.3 (2) |
C14—C9—C10 | 120.3 (2) | N3—C22—C17 | 107.5 (2) |
C14—C9—C8 | 121.2 (2) | C21—C22—C17 | 122.1 (3) |
C10—C9—C8 | 118.4 (2) | N3—C23—C16 | 110.6 (2) |
C9—C10—C11 | 119.5 (3) | N3—C23—H23 | 124.7 |
C9—C10—H10 | 120.2 | C16—C23—H23 | 124.7 |
C11—C10—H10 | 120.2 | C15—C24—H24A | 109.5 |
C12—C11—C10 | 120.0 (3) | C15—C24—H24B | 109.5 |
C12—C11—H11 | 120.0 | H24A—C24—H24B | 109.5 |
C10—C11—H11 | 120.0 | C15—C24—H24C | 109.5 |
C11—C12—C13 | 120.7 (2) | H24A—C24—H24C | 109.5 |
C11—C12—H12 | 119.7 | H24B—C24—H24C | 109.5 |
C13—C12—H12 | 119.7 | C1—N1—N2 | 111.51 (18) |
C12—C13—C14 | 120.1 (3) | C15—N2—N1 | 114.44 (18) |
C12—C13—H13 | 119.9 | C23—N3—C22 | 109.6 (2) |
C14—C13—H13 | 119.9 | C23—N3—H25 | 125.2 |
C9—C14—C13 | 119.3 (3) | C22—N3—H25 | 125.2 |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C18—H18···N2 | 0.93 | 2.60 | 3.074 (3) | 112 |
\
(
Z)-2-{(
E)-[(1-Methyl-1
H-indol-3-yl)\
methylidene]hydrazinylidene}-1,2-diphenylethanone (7-BMHMFI)
top
Crystal data top
C24H19N3O | F(000) = 768 |
Mr = 365.42 | Dx = 1.224 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 18.6779 (6) Å | Cell parameters from 380 reflections |
b = 8.6694 (3) Å | θ = 2.5–26.0° |
c = 12.7956 (4) Å | µ = 0.08 mm−1 |
β = 106.910 (4)° | T = 293 K |
V = 1982.36 (12) Å3 | Block, yellow |
Z = 4 | 0.33 × 0.28 × 0.25 mm |
Data collection top
Bruker SMART CCD area detector diffractometer | 3837 independent reflections |
Radiation source: fine-focus sealed tube | 2964 reflections with I > 2σ(I) |
Detector resolution: 10.11 pixels mm-1 | Rint = 0.021 |
phi and ω scans | θmax = 26.1°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −14→22 |
Tmin = 0.971, Tmax = 0.987 | k = −10→10 |
9410 measured reflections | l = −15→15 |
Refinement top
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | Only H-atom displacement parameters refined |
R[F2 > 2σ(F2)] = 0.045 | w = 1/[σ2(Fo2) + (0.0721P)2 + 0.203P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.140 | (Δ/σ)max < 0.001 |
S = 1.03 | Δρmax = 0.16 e Å−3 |
3837 reflections | Δρmin = −0.15 e Å−3 |
274 parameters | Extinction correction: SHELXL2016 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
0 restraints | Extinction coefficient: 0.0045 (13) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and
goodness of fit S are based on F2, conventional R-factors R are based
on F, with F set to zero for negative F2. The threshold expression of
F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is
not relevant to the choice of reflections for refinement. R-factors based
on F2 are statistically about twice as large as those based on F, and R-
factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.80896 (9) | 0.5549 (2) | 0.27473 (14) | 0.0584 (4) | |
C2 | 0.88286 (10) | 0.6191 (2) | 0.33323 (15) | 0.0659 (4) | |
C3 | 0.89301 (12) | 0.7045 (3) | 0.42794 (18) | 0.0837 (6) | |
H3 | 0.852945 | 0.720693 | 0.455994 | 0.075 (6)* | |
C4 | 0.96264 (15) | 0.7658 (4) | 0.4811 (2) | 0.1081 (9) | |
H4 | 0.969070 | 0.823302 | 0.544526 | 0.120 (10)* | |
C5 | 1.02223 (14) | 0.7419 (4) | 0.4403 (3) | 0.1200 (11) | |
H5 | 1.068774 | 0.784014 | 0.475643 | 0.125 (10)* | |
C6 | 1.01287 (14) | 0.6567 (5) | 0.3485 (3) | 0.1234 (11) | |
H6 | 1.053354 | 0.639808 | 0.321499 | 0.134 (11)* | |
C7 | 0.94374 (11) | 0.5945 (3) | 0.2945 (2) | 0.0953 (7) | |
H7 | 0.938221 | 0.535900 | 0.231818 | 0.099 (8)* | |
C8 | 0.79924 (9) | 0.4658 (2) | 0.16966 (14) | 0.0603 (4) | |
C9 | 0.79785 (8) | 0.2948 (2) | 0.17403 (13) | 0.0576 (4) | |
C10 | 0.77856 (11) | 0.2110 (3) | 0.07773 (17) | 0.0757 (5) | |
H10 | 0.766790 | 0.261502 | 0.010761 | 0.083 (6)* | |
C11 | 0.77691 (13) | 0.0510 (3) | 0.0818 (2) | 0.0955 (7) | |
H11 | 0.763005 | −0.005355 | 0.017221 | 0.120 (9)* | |
C12 | 0.79548 (14) | −0.0243 (3) | 0.1796 (3) | 0.1008 (8) | |
H12 | 0.795084 | −0.131493 | 0.181433 | 0.128 (10)* | |
C13 | 0.81477 (13) | 0.0581 (3) | 0.2755 (2) | 0.0891 (6) | |
H13 | 0.827294 | 0.006791 | 0.342203 | 0.111 (9)* | |
C14 | 0.81552 (10) | 0.2171 (2) | 0.27258 (16) | 0.0679 (5) | |
H14 | 0.828040 | 0.272649 | 0.337583 | 0.073 (6)* | |
C15 | 0.62962 (9) | 0.54270 (18) | 0.27528 (13) | 0.0556 (4) | |
H15 | 0.635990 | 0.605392 | 0.336293 | 0.060 (5)* | |
C16 | 0.55620 (8) | 0.48955 (17) | 0.21907 (12) | 0.0496 (3) | |
C17 | 0.53199 (9) | 0.38820 (16) | 0.12688 (12) | 0.0487 (3) | |
C18 | 0.56873 (10) | 0.29923 (18) | 0.06710 (14) | 0.0592 (4) | |
H18 | 0.620638 | 0.300348 | 0.083982 | 0.067 (5)* | |
C19 | 0.52650 (13) | 0.2104 (2) | −0.01693 (15) | 0.0733 (5) | |
H19 | 0.550354 | 0.149515 | −0.056525 | 0.095 (7)* | |
C20 | 0.44874 (13) | 0.2091 (2) | −0.04436 (15) | 0.0771 (6) | |
H20 | 0.421868 | 0.148219 | −0.102360 | 0.085 (6)* | |
C21 | 0.41058 (11) | 0.2957 (2) | 0.01205 (13) | 0.0644 (4) | |
H21 | 0.358599 | 0.295302 | −0.006658 | 0.068 (5)* | |
C22 | 0.45351 (9) | 0.38363 (17) | 0.09833 (12) | 0.0522 (4) | |
C23 | 0.49247 (9) | 0.53965 (19) | 0.24184 (13) | 0.0556 (4) | |
H23 | 0.491806 | 0.606454 | 0.298423 | 0.071 (5)* | |
C24 | 0.35385 (10) | 0.5102 (3) | 0.16663 (19) | 0.0815 (6) | |
H24A | 0.331755 | 0.419249 | 0.186891 | 0.139 (11)* | |
H24B | 0.326182 | 0.540419 | 0.093916 | 0.117 (9)* | |
H24C | 0.352681 | 0.592153 | 0.216577 | 0.136 (11)* | |
N1 | 0.75252 (8) | 0.57812 (18) | 0.31109 (12) | 0.0640 (4) | |
N2 | 0.68730 (7) | 0.50715 (17) | 0.24473 (12) | 0.0591 (3) | |
N3 | 0.43088 (7) | 0.47817 (16) | 0.17043 (11) | 0.0557 (3) | |
O1 | 0.79386 (9) | 0.53693 (19) | 0.08597 (11) | 0.0846 (4) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0518 (8) | 0.0596 (9) | 0.0633 (9) | 0.0000 (7) | 0.0160 (7) | 0.0068 (7) |
C2 | 0.0539 (9) | 0.0692 (10) | 0.0702 (10) | −0.0027 (8) | 0.0113 (8) | 0.0106 (9) |
C3 | 0.0734 (12) | 0.0917 (15) | 0.0820 (13) | −0.0150 (11) | 0.0162 (10) | −0.0051 (11) |
C4 | 0.0916 (17) | 0.123 (2) | 0.0935 (17) | −0.0272 (16) | 0.0017 (13) | −0.0131 (16) |
C5 | 0.0637 (14) | 0.161 (3) | 0.119 (2) | −0.0317 (16) | 0.0000 (14) | −0.005 (2) |
C6 | 0.0605 (13) | 0.184 (3) | 0.125 (2) | −0.0248 (17) | 0.0246 (14) | −0.014 (2) |
C7 | 0.0583 (11) | 0.132 (2) | 0.0959 (16) | −0.0114 (12) | 0.0230 (11) | −0.0120 (15) |
C8 | 0.0471 (8) | 0.0759 (11) | 0.0583 (9) | 0.0023 (7) | 0.0157 (7) | 0.0095 (8) |
C9 | 0.0421 (7) | 0.0717 (10) | 0.0614 (9) | 0.0081 (7) | 0.0188 (7) | 0.0002 (8) |
C10 | 0.0638 (10) | 0.0927 (14) | 0.0693 (11) | 0.0210 (10) | 0.0173 (9) | −0.0073 (10) |
C11 | 0.0848 (15) | 0.0903 (16) | 0.1062 (18) | 0.0155 (12) | 0.0196 (13) | −0.0320 (15) |
C12 | 0.0933 (16) | 0.0695 (14) | 0.139 (2) | 0.0118 (12) | 0.0321 (16) | −0.0062 (15) |
C13 | 0.0887 (15) | 0.0769 (13) | 0.1043 (17) | 0.0142 (11) | 0.0320 (13) | 0.0206 (13) |
C14 | 0.0649 (10) | 0.0727 (11) | 0.0673 (10) | 0.0060 (8) | 0.0213 (8) | 0.0072 (9) |
C15 | 0.0585 (9) | 0.0524 (8) | 0.0588 (9) | 0.0006 (7) | 0.0219 (7) | −0.0042 (7) |
C16 | 0.0537 (8) | 0.0460 (7) | 0.0532 (8) | 0.0023 (6) | 0.0223 (6) | 0.0026 (6) |
C17 | 0.0581 (8) | 0.0425 (7) | 0.0503 (7) | 0.0016 (6) | 0.0236 (6) | 0.0085 (6) |
C18 | 0.0748 (11) | 0.0516 (8) | 0.0613 (9) | 0.0005 (7) | 0.0357 (8) | 0.0007 (7) |
C19 | 0.1042 (15) | 0.0615 (10) | 0.0650 (10) | −0.0013 (10) | 0.0414 (11) | −0.0083 (8) |
C20 | 0.1085 (16) | 0.0655 (11) | 0.0537 (9) | −0.0138 (10) | 0.0180 (10) | −0.0076 (8) |
C21 | 0.0688 (10) | 0.0644 (10) | 0.0560 (9) | −0.0103 (8) | 0.0117 (8) | 0.0086 (8) |
C22 | 0.0611 (9) | 0.0486 (8) | 0.0486 (8) | 0.0003 (6) | 0.0187 (7) | 0.0111 (6) |
C23 | 0.0600 (9) | 0.0555 (8) | 0.0557 (8) | 0.0047 (7) | 0.0236 (7) | −0.0024 (7) |
C24 | 0.0540 (10) | 0.0998 (16) | 0.0919 (14) | 0.0166 (10) | 0.0231 (10) | 0.0061 (13) |
N1 | 0.0530 (7) | 0.0666 (9) | 0.0714 (9) | −0.0037 (6) | 0.0165 (6) | −0.0065 (7) |
N2 | 0.0498 (7) | 0.0627 (8) | 0.0663 (8) | −0.0020 (6) | 0.0191 (6) | −0.0072 (7) |
N3 | 0.0515 (7) | 0.0610 (8) | 0.0575 (7) | 0.0046 (6) | 0.0206 (6) | 0.0057 (6) |
O1 | 0.0949 (10) | 0.0924 (10) | 0.0669 (8) | −0.0030 (8) | 0.0239 (7) | 0.0199 (7) |
Geometric parameters (Å, º) top
C1—N1 | 1.286 (2) | C13—H13 | 0.9300 |
C1—C2 | 1.474 (2) | C14—H14 | 0.9300 |
C1—C8 | 1.515 (2) | C15—N2 | 1.286 (2) |
C2—C7 | 1.383 (3) | C15—C16 | 1.427 (2) |
C2—C3 | 1.385 (3) | C15—H15 | 0.9300 |
C3—C4 | 1.386 (3) | C16—C23 | 1.376 (2) |
C3—H3 | 0.9300 | C16—C17 | 1.434 (2) |
C4—C5 | 1.375 (4) | C17—C18 | 1.399 (2) |
C4—H4 | 0.9300 | C17—C22 | 1.404 (2) |
C5—C6 | 1.355 (4) | C18—C19 | 1.371 (3) |
C5—H5 | 0.9300 | C18—H18 | 0.9300 |
C6—C7 | 1.384 (3) | C19—C20 | 1.392 (3) |
C6—H6 | 0.9300 | C19—H19 | 0.9300 |
C7—H7 | 0.9300 | C20—C21 | 1.375 (3) |
C8—O1 | 1.214 (2) | C20—H20 | 0.9300 |
C8—C9 | 1.483 (3) | C21—C22 | 1.389 (2) |
C9—C14 | 1.382 (2) | C21—H21 | 0.9300 |
C9—C10 | 1.385 (3) | C22—N3 | 1.389 (2) |
C10—C11 | 1.388 (3) | C23—N3 | 1.353 (2) |
C10—H10 | 0.9300 | C23—H23 | 0.9300 |
C11—C12 | 1.364 (4) | C24—N3 | 1.452 (2) |
C11—H11 | 0.9300 | C24—H24A | 0.9600 |
C12—C13 | 1.374 (4) | C24—H24B | 0.9600 |
C12—H12 | 0.9300 | C24—H24C | 0.9600 |
C13—C14 | 1.379 (3) | N1—N2 | 1.4077 (19) |
| | | |
N1—C1—C2 | 120.14 (17) | C13—C14—H14 | 119.7 |
N1—C1—C8 | 120.11 (15) | C9—C14—H14 | 119.7 |
C2—C1—C8 | 119.72 (15) | N2—C15—C16 | 122.45 (15) |
C7—C2—C3 | 118.56 (19) | N2—C15—H15 | 118.8 |
C7—C2—C1 | 120.41 (19) | C16—C15—H15 | 118.8 |
C3—C2—C1 | 121.03 (18) | C23—C16—C15 | 123.72 (15) |
C2—C3—C4 | 120.3 (2) | C23—C16—C17 | 106.40 (14) |
C2—C3—H3 | 119.9 | C15—C16—C17 | 129.73 (14) |
C4—C3—H3 | 119.9 | C18—C17—C22 | 118.90 (15) |
C5—C4—C3 | 120.2 (3) | C18—C17—C16 | 134.43 (15) |
C5—C4—H4 | 119.9 | C22—C17—C16 | 106.66 (13) |
C3—C4—H4 | 119.9 | C19—C18—C17 | 118.49 (17) |
C6—C5—C4 | 119.8 (2) | C19—C18—H18 | 120.8 |
C6—C5—H5 | 120.1 | C17—C18—H18 | 120.8 |
C4—C5—H5 | 120.1 | C18—C19—C20 | 121.50 (17) |
C5—C6—C7 | 120.7 (3) | C18—C19—H19 | 119.2 |
C5—C6—H6 | 119.6 | C20—C19—H19 | 119.2 |
C7—C6—H6 | 119.6 | C21—C20—C19 | 121.71 (18) |
C2—C7—C6 | 120.4 (3) | C21—C20—H20 | 119.1 |
C2—C7—H7 | 119.8 | C19—C20—H20 | 119.1 |
C6—C7—H7 | 119.8 | C20—C21—C22 | 116.71 (18) |
O1—C8—C9 | 122.88 (17) | C20—C21—H21 | 121.6 |
O1—C8—C1 | 118.77 (18) | C22—C21—H21 | 121.6 |
C9—C8—C1 | 118.35 (14) | C21—C22—N3 | 129.45 (16) |
C14—C9—C10 | 119.15 (19) | C21—C22—C17 | 122.67 (15) |
C14—C9—C8 | 121.27 (16) | N3—C22—C17 | 107.87 (13) |
C10—C9—C8 | 119.58 (17) | N3—C23—C16 | 110.52 (14) |
C9—C10—C11 | 119.6 (2) | N3—C23—H23 | 124.7 |
C9—C10—H10 | 120.2 | C16—C23—H23 | 124.7 |
C11—C10—H10 | 120.2 | N3—C24—H24A | 109.5 |
C12—C11—C10 | 120.7 (2) | N3—C24—H24B | 109.5 |
C12—C11—H11 | 119.7 | H24A—C24—H24B | 109.5 |
C10—C11—H11 | 119.7 | N3—C24—H24C | 109.5 |
C11—C12—C13 | 120.1 (2) | H24A—C24—H24C | 109.5 |
C11—C12—H12 | 120.0 | H24B—C24—H24C | 109.5 |
C13—C12—H12 | 120.0 | C1—N1—N2 | 111.71 (15) |
C12—C13—C14 | 119.8 (2) | C15—N2—N1 | 111.49 (14) |
C12—C13—H13 | 120.1 | C23—N3—C22 | 108.54 (13) |
C14—C13—H13 | 120.1 | C23—N3—C24 | 125.92 (16) |
C13—C14—C9 | 120.7 (2) | C22—N3—C24 | 125.50 (16) |
(
Z)-2-{(
E)-[(Naphthalen-1-yl)methylidene]hydrazinylidene}-1,2-diphenylethanone (8-BDHFN)
top
Crystal data top
C25H18N2O | F(000) = 760 |
Mr = 362.41 | Dx = 1.247 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 17.2081 (13) Å | Cell parameters from 380 reflections |
b = 9.4075 (8) Å | θ = 2.5–26.0° |
c = 11.9703 (9) Å | µ = 0.08 mm−1 |
β = 94.814 (7)° | T = 293 K |
V = 1931.0 (3) Å3 | Block, yellow |
Z = 4 | 0.40 × 0.40 × 0.16 mm |
Data collection top
Bruker SMART CCD area detector diffractometer | 3396 independent reflections |
Radiation source: fine-focus sealed tube | 1411 reflections with I > 2σ(I) |
Detector resolution: 10.12 pixels mm-1 | Rint = 0.078 |
phi and ω scans | θmax = 25.0°, θmin = 3.0° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −20→20 |
Tmin = 0.970, Tmax = 0.989 | k = −11→10 |
10556 measured reflections | l = −14→14 |
Refinement top
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | Only H-atom displacement parameters refined |
R[F2 > 2σ(F2)] = 0.052 | w = 1/[σ2(Fo2) + (0.0024P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.083 | (Δ/σ)max < 0.001 |
S = 0.87 | Δρmax = 0.14 e Å−3 |
3396 reflections | Δρmin = −0.14 e Å−3 |
272 parameters | Extinction correction: SHELXL2016 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
0 restraints | Extinction coefficient: 0.00135 (15) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.38170 (16) | 0.3245 (3) | 0.5324 (2) | 0.0479 (7) | |
C2 | 0.45003 (16) | 0.2405 (3) | 0.5767 (2) | 0.0492 (8) | |
C3 | 0.51422 (17) | 0.2274 (3) | 0.5158 (3) | 0.0695 (10) | |
H3 | 0.515242 | 0.274493 | 0.447585 | 0.063 (9)* | |
C4 | 0.57683 (19) | 0.1451 (4) | 0.5553 (3) | 0.0787 (11) | |
H4 | 0.619504 | 0.135979 | 0.513009 | 0.096 (12)* | |
C5 | 0.57676 (19) | 0.0761 (4) | 0.6569 (3) | 0.0700 (10) | |
H5 | 0.619147 | 0.020890 | 0.683658 | 0.072 (10)* | |
C6 | 0.51344 (19) | 0.0901 (3) | 0.7175 (3) | 0.0696 (10) | |
H6 | 0.512814 | 0.044390 | 0.786371 | 0.077 (10)* | |
C7 | 0.45071 (18) | 0.1709 (3) | 0.6779 (2) | 0.0628 (9) | |
H7 | 0.407940 | 0.178794 | 0.720078 | 0.051 (8)* | |
C8 | 0.30593 (16) | 0.3112 (3) | 0.5892 (2) | 0.0506 (8) | |
C9 | 0.24449 (15) | 0.2118 (3) | 0.5424 (2) | 0.0471 (7) | |
C10 | 0.25215 (19) | 0.1364 (3) | 0.4446 (2) | 0.0645 (9) | |
H10 | 0.296674 | 0.147167 | 0.406439 | 0.068 (10)* | |
C11 | 0.1942 (2) | 0.0460 (4) | 0.4042 (3) | 0.0811 (11) | |
H11 | 0.199667 | −0.004809 | 0.338738 | 0.075 (11)* | |
C12 | 0.1284 (2) | 0.0298 (4) | 0.4592 (4) | 0.0904 (12) | |
H12 | 0.089288 | −0.032034 | 0.431149 | 0.105 (14)* | |
C13 | 0.1199 (2) | 0.1044 (4) | 0.5554 (3) | 0.0878 (12) | |
H13 | 0.074829 | 0.093934 | 0.592373 | 0.111 (13)* | |
C14 | 0.17771 (18) | 0.1948 (4) | 0.5978 (3) | 0.0675 (10) | |
H14 | 0.171980 | 0.244559 | 0.663753 | 0.075 (11)* | |
C15 | 0.31775 (17) | 0.5533 (3) | 0.3302 (2) | 0.0556 (8) | |
H15 | 0.366978 | 0.567807 | 0.305639 | 0.066 (9)* | |
C16 | 0.25293 (16) | 0.6289 (3) | 0.2709 (2) | 0.0491 (8) | |
C17 | 0.27243 (19) | 0.7208 (3) | 0.1884 (2) | 0.0634 (9) | |
H17 | 0.324544 | 0.731061 | 0.174771 | 0.042 (7)* | |
C18 | 0.2158 (2) | 0.7989 (3) | 0.1247 (3) | 0.0724 (10) | |
H18 | 0.230588 | 0.860029 | 0.069249 | 0.075 (10)* | |
C19 | 0.1399 (2) | 0.7866 (4) | 0.1429 (3) | 0.0739 (10) | |
H19 | 0.102806 | 0.839726 | 0.100082 | 0.099 (12)* | |
C20 | 0.11607 (19) | 0.6942 (3) | 0.2262 (2) | 0.0578 (8) | |
C21 | 0.17273 (17) | 0.6118 (3) | 0.2911 (2) | 0.0489 (8) | |
C22 | 0.14497 (17) | 0.5146 (3) | 0.3686 (2) | 0.0534 (8) | |
H22 | 0.180386 | 0.457731 | 0.411164 | 0.053 (9)* | |
C23 | 0.06746 (18) | 0.5025 (3) | 0.3824 (2) | 0.0632 (9) | |
H23 | 0.050872 | 0.437604 | 0.433924 | 0.039 (8)* | |
C24 | 0.0127 (2) | 0.5861 (4) | 0.3203 (3) | 0.0771 (10) | |
H24 | −0.039946 | 0.578124 | 0.331423 | 0.100 (12)* | |
C25 | 0.0365 (2) | 0.6792 (4) | 0.2435 (3) | 0.0790 (11) | |
H25 | −0.000333 | 0.733990 | 0.201654 | 0.074 (10)* | |
N1 | 0.38670 (13) | 0.4055 (3) | 0.44718 (19) | 0.0589 (7) | |
N2 | 0.31309 (13) | 0.4685 (3) | 0.41351 (19) | 0.0569 (7) | |
O1 | 0.29977 (11) | 0.3808 (2) | 0.67417 (16) | 0.0753 (7) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0473 (18) | 0.049 (2) | 0.0467 (17) | 0.0024 (16) | 0.0003 (14) | −0.0007 (15) |
C2 | 0.0482 (18) | 0.055 (2) | 0.0429 (18) | 0.0022 (16) | −0.0030 (15) | 0.0009 (15) |
C3 | 0.061 (2) | 0.090 (3) | 0.059 (2) | 0.013 (2) | 0.0103 (18) | 0.021 (2) |
C4 | 0.051 (2) | 0.104 (3) | 0.081 (3) | 0.019 (2) | 0.012 (2) | 0.013 (2) |
C5 | 0.056 (2) | 0.081 (3) | 0.071 (2) | 0.024 (2) | −0.0086 (18) | −0.002 (2) |
C6 | 0.073 (2) | 0.081 (3) | 0.053 (2) | 0.022 (2) | −0.0043 (18) | 0.010 (2) |
C7 | 0.062 (2) | 0.074 (3) | 0.0531 (19) | 0.0133 (19) | 0.0109 (18) | 0.0073 (18) |
C8 | 0.0479 (19) | 0.056 (2) | 0.0477 (17) | 0.0112 (17) | 0.0042 (15) | 0.0088 (16) |
C9 | 0.0436 (17) | 0.046 (2) | 0.0520 (18) | 0.0033 (16) | 0.0070 (14) | 0.0075 (15) |
C10 | 0.063 (2) | 0.071 (3) | 0.060 (2) | −0.009 (2) | 0.0118 (19) | −0.0078 (18) |
C11 | 0.084 (3) | 0.078 (3) | 0.079 (3) | −0.015 (2) | −0.003 (2) | −0.016 (2) |
C12 | 0.074 (3) | 0.093 (3) | 0.101 (3) | −0.028 (3) | −0.010 (3) | 0.020 (3) |
C13 | 0.060 (3) | 0.113 (4) | 0.092 (3) | −0.011 (2) | 0.013 (2) | 0.020 (3) |
C14 | 0.059 (2) | 0.086 (3) | 0.059 (2) | 0.006 (2) | 0.0130 (18) | 0.007 (2) |
C15 | 0.046 (2) | 0.061 (2) | 0.060 (2) | 0.0003 (17) | 0.0028 (16) | 0.0022 (17) |
C16 | 0.054 (2) | 0.048 (2) | 0.0447 (17) | 0.0007 (17) | 0.0011 (15) | −0.0002 (15) |
C17 | 0.060 (2) | 0.069 (3) | 0.061 (2) | −0.0101 (19) | 0.0059 (18) | 0.0118 (18) |
C18 | 0.094 (3) | 0.059 (2) | 0.062 (2) | −0.002 (2) | −0.008 (2) | 0.0230 (19) |
C19 | 0.077 (3) | 0.068 (3) | 0.074 (2) | 0.007 (2) | −0.009 (2) | 0.012 (2) |
C20 | 0.066 (2) | 0.049 (2) | 0.057 (2) | 0.0008 (19) | −0.0016 (17) | −0.0001 (17) |
C21 | 0.059 (2) | 0.045 (2) | 0.0420 (17) | 0.0005 (17) | −0.0022 (15) | 0.0001 (15) |
C22 | 0.054 (2) | 0.057 (2) | 0.0481 (18) | 0.0011 (18) | −0.0054 (16) | 0.0010 (17) |
C23 | 0.062 (2) | 0.064 (2) | 0.064 (2) | −0.001 (2) | 0.0039 (18) | 0.0066 (19) |
C24 | 0.055 (2) | 0.082 (3) | 0.094 (3) | 0.006 (2) | 0.003 (2) | 0.006 (2) |
C25 | 0.070 (3) | 0.074 (3) | 0.089 (3) | 0.019 (2) | −0.011 (2) | 0.020 (2) |
N1 | 0.0497 (16) | 0.0657 (19) | 0.0605 (16) | 0.0099 (14) | −0.0009 (13) | 0.0128 (14) |
N2 | 0.0538 (17) | 0.0599 (19) | 0.0564 (16) | 0.0068 (14) | 0.0019 (13) | 0.0143 (13) |
O1 | 0.0744 (16) | 0.0946 (19) | 0.0576 (13) | 0.0072 (13) | 0.0088 (11) | −0.0200 (13) |
Geometric parameters (Å, º) top
C1—N1 | 1.282 (3) | C13—H13 | 0.9300 |
C1—C2 | 1.478 (3) | C14—H14 | 0.9300 |
C1—C8 | 1.525 (3) | C15—N2 | 1.284 (3) |
C2—C7 | 1.376 (3) | C15—C16 | 1.457 (3) |
C2—C3 | 1.379 (3) | C15—H15 | 0.9300 |
C3—C4 | 1.378 (4) | C16—C17 | 1.374 (3) |
C3—H3 | 0.9300 | C16—C21 | 1.430 (3) |
C4—C5 | 1.379 (4) | C17—C18 | 1.395 (4) |
C4—H4 | 0.9300 | C17—H17 | 0.9300 |
C5—C6 | 1.366 (4) | C18—C19 | 1.347 (4) |
C5—H5 | 0.9300 | C18—H18 | 0.9300 |
C6—C7 | 1.372 (3) | C19—C20 | 1.409 (4) |
C6—H6 | 0.9300 | C19—H19 | 0.9300 |
C7—H7 | 0.9300 | C20—C25 | 1.409 (4) |
C8—O1 | 1.221 (3) | C20—C21 | 1.424 (3) |
C8—C9 | 1.486 (4) | C21—C22 | 1.414 (3) |
C9—C10 | 1.384 (3) | C22—C23 | 1.362 (3) |
C9—C14 | 1.384 (3) | C22—H22 | 0.9300 |
C10—C11 | 1.367 (4) | C23—C24 | 1.393 (4) |
C10—H10 | 0.9300 | C23—H23 | 0.9300 |
C11—C12 | 1.365 (4) | C24—C25 | 1.357 (4) |
C11—H11 | 0.9300 | C24—H24 | 0.9300 |
C12—C13 | 1.368 (4) | C25—H25 | 0.9300 |
C12—H12 | 0.9300 | N1—N2 | 1.426 (3) |
C13—C14 | 1.372 (4) | | |
| | | |
N1—C1—C2 | 119.9 (3) | C13—C14—C9 | 120.0 (3) |
N1—C1—C8 | 121.4 (3) | C13—C14—H14 | 120.0 |
C2—C1—C8 | 118.7 (2) | C9—C14—H14 | 120.0 |
C7—C2—C3 | 118.4 (3) | N2—C15—C16 | 125.9 (3) |
C7—C2—C1 | 121.2 (3) | N2—C15—H15 | 117.0 |
C3—C2—C1 | 120.4 (3) | C16—C15—H15 | 117.0 |
C4—C3—C2 | 120.4 (3) | C17—C16—C21 | 119.3 (3) |
C4—C3—H3 | 119.8 | C17—C16—C15 | 115.7 (3) |
C2—C3—H3 | 119.8 | C21—C16—C15 | 124.9 (3) |
C3—C4—C5 | 120.6 (3) | C16—C17—C18 | 121.5 (3) |
C3—C4—H4 | 119.7 | C16—C17—H17 | 119.3 |
C5—C4—H4 | 119.7 | C18—C17—H17 | 119.3 |
C6—C5—C4 | 118.9 (3) | C19—C18—C17 | 120.6 (3) |
C6—C5—H5 | 120.5 | C19—C18—H18 | 119.7 |
C4—C5—H5 | 120.5 | C17—C18—H18 | 119.7 |
C5—C6—C7 | 120.6 (3) | C18—C19—C20 | 120.7 (3) |
C5—C6—H6 | 119.7 | C18—C19—H19 | 119.6 |
C7—C6—H6 | 119.7 | C20—C19—H19 | 119.6 |
C6—C7—C2 | 121.1 (3) | C25—C20—C19 | 120.6 (3) |
C6—C7—H7 | 119.4 | C25—C20—C21 | 119.6 (3) |
C2—C7—H7 | 119.4 | C19—C20—C21 | 119.7 (3) |
O1—C8—C9 | 122.9 (3) | C22—C21—C20 | 117.2 (3) |
O1—C8—C1 | 117.6 (3) | C22—C21—C16 | 124.6 (3) |
C9—C8—C1 | 119.4 (3) | C20—C21—C16 | 118.2 (3) |
C10—C9—C14 | 119.2 (3) | C23—C22—C21 | 121.4 (3) |
C10—C9—C8 | 121.8 (3) | C23—C22—H22 | 119.3 |
C14—C9—C8 | 119.0 (3) | C21—C22—H22 | 119.3 |
C11—C10—C9 | 119.9 (3) | C22—C23—C24 | 120.9 (3) |
C11—C10—H10 | 120.0 | C22—C23—H23 | 119.5 |
C9—C10—H10 | 120.0 | C24—C23—H23 | 119.5 |
C12—C11—C10 | 120.6 (4) | C25—C24—C23 | 119.8 (3) |
C12—C11—H11 | 119.7 | C25—C24—H24 | 120.1 |
C10—C11—H11 | 119.7 | C23—C24—H24 | 120.1 |
C11—C12—C13 | 120.0 (4) | C24—C25—C20 | 121.1 (3) |
C11—C12—H12 | 120.0 | C24—C25—H25 | 119.5 |
C13—C12—H12 | 120.0 | C20—C25—H25 | 119.5 |
C12—C13—C14 | 120.3 (4) | C1—N1—N2 | 110.8 (2) |
C12—C13—H13 | 119.8 | C15—N2—N1 | 111.5 (2) |
C14—C13—H13 | 119.8 | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···O1i | 0.93 | 2.49 | 3.355 (4) | 156 |
C3—H3···N1 | 0.93 | 2.53 | 2.827 (4) | 99 |
C14—H14···O1 | 0.93 | 2.54 | 2.826 (4) | 98 |
C22—H22···N2 | 0.93 | 2.28 | 2.930 (4) | 126 |
Symmetry code: (i) −x+1, y−1/2, −z+3/2. |
Inhibition of A549, 4T1 and MRC-5, NIH 3T3 cell growth by the title
compounds, compared with cisplatin (µM) topCompound | A549 cells, IC50 | 4T1 cells, IC50 | MRC-5 cells, IC50 | NIH 3T3 fibroblasts, IC50 |
BDHFI | 8.0±0.5 | 7.5±0.5 | 24.5±1.5 | 29.5±1.0 |
BDHAI | 8.5±0.6 | 7.0±0.6 | 36.5±1.5 | 43.0±1.5 |
BDHMFI | 125.0±1.0 | 122.0±1.0 | > 150.0 | > 150.0 |
BDHFN | 130.0±1.0 | 125.0±1.0 | > 150.0 | > 150.0 |
BMHFI | 46.5±0.5 | 32.5±0.5 | 88.0±1.5 | 85.0±1.5 |
BMHAI | 43.0±0.5 | 30.0±0.5 | 83.0±1.5 | 76.0±1.5 |
BMHMFI | 148.0±1.2 | 141.0±1.0 | > 150.0 | > 150.0 |
BMHFN | 150.0±1.2 | 148.0±1.0 | > 150.0 | > 150.0 |
Cisplatin | 6.5 ± 0.5 | 0.5 ± 0.1 | 22.5 ± 1.5 | 21.0 ± 1.0 |
Total scores and Spearman's rank correlation coefficients (ρ in the
last two rows) of 18 possible targets (PDB IDs are in brackets; two targets
in the last two columns were docked using homology modules for the absence
of detailed 3D information) top | c-Jun N-terminal kinase 3(2R9S) | CaM kinase II (2VZ6) | Delta opioid receptor (4N6H) | Gonadotropin-releasing hormone receptor (6NBF) | hERG (3O0U) | Inhibitor of apoptosis protein 3 (5C3H) | Kinesin-like protein 1 (3ZCW) | Mu opioid receptor (4DKL) | Probable G-protein coupled receptor 88 (5XF1) |
Ligandi | 12.24 | 9.27 | 9.37 | 7.76 | 9.87 | 7.33 | 19.68 | 10.53 | 6.67 |
BDHFI | 8.08 | 8.43 | 7.56 | 6.19 | 6.90 | 6.23 | 10.44 | 8.57 | 6.85 |
BDHAI | 8.16 | 8.82 | 7.44 | 6.36 | 8.02 | 6.14 | 6.99 | 9.46 | 6.15 |
BDHMFI | 5.96 | 6.92 | 6.53 | 6.77 | 4.54 | 5.07 | 8.61 | 8.23 | 5.28 |
BDHFN | 5.94 | 7.59 | 7.05 | 5.00 | 6.25 | 5.33 | 9.04 | 7.45 | 5.84 |
BMHFI | 6.64 | 7.32 | 7.44 | 5.29 | 5.97 | 5.83 | 9.44 | 7.31 | 4.39 |
BMHAI | 5.60 | 6.80 | 6.32 | 5.88 | 6.41 | 4.77 | 8.27 | 6.15 | 4.52 |
BMHMFI | 6.39 | 5.98 | 6.65 | 4.19 | 4.91 | 4.42 | 7.76 | 6.36 | 4.58 |
BMHFN | 5.59 | 6.03 | 6.45 | 4.67 | 4.20 | 4.30 | 6.16 | 6.47 | 4.37 |
ρA549ii | 0.67 | 0.74 | 0.57 | 0.71 | 0.86 | 0.83 | 0.48 | 0.52 | 0.62 |
ρ4T1iii | 0.69 | 0.76 | 0.55 | 0.74 | 0.88 | 0.81 | 0.33 | 0.55 | 0.60 |
| | | | | | | | | |
| Protein kinase C alpha (4RA4) | Serine/threonine-protein kinase AKT2 (3D0E) | Serine/threonine-protein kinase PIM1 (1YXT) | Serine/threonine-protein kinase PIM2 (4X7Q) | Serine/threonine-protein kinase PIM3 (5DWR) | Sigma opioid receptor (6DK0) | Tryptase beta-1 (4MPU) | Neurokinin 2 receptor(by homology) | 5-HT6 receptor(by homology) |
Ligandi | 7.34 | 16.79 | 32.82 | 15.18 | 10.64 | 10.81 | 23.41 | 10.04 | 9.00 |
BDHFI | 6.35 | 8.22 | 9.73 | 6.70 | 8.00 | 8.34 | 7.39 | 9.28 | 7.95 |
BDHAI | 6.79 | 6.40 | 9.60 | 8.19 | 9.92 | 7.17 | 8.12 | 8.80 | 4.56 |
BDHMFI | 5.27 | 5.65 | 6.64 | 5.56 | 4.45 | 1.87 | 6.02 | 8.17 | 6.40 |
BDHFN | 5.47 | 5.51 | 7.59 | 5.63 | 5.51 | 5.23 | 7.99 | 8.73 | 7.07 |
BMHFI | 4.43 | 7.06 | 7.95 | 7.87 | 6.39 | 6.41 | 5.44 | 6.71 | 5.05 |
BMHAI | 4.87 | 6.67 | 7.01 | 7.68 | 7.49 | 8.27 | 5.51 | 5.68 | 5.50 |
BMHMFI | 5.06 | 6.77 | 5.52 | 5.92 | 6.42 | 7.00 | 5.05 | 6.00 | 4.43 |
BMHFN | 4.30 | 7.46 | 5.80 | 5.92 | 6.06 | 6.23 | 5.22 | 6.44 | 6.18 |
ρA549ii | 0.60 | 0.12 | 0.86 | 0.62 | 0.69 | 0.69 | 0.62 | 0.52 | 0.17 |
ρ4T1iii | 0.62 | 0.00 | 0.83 | 0.69 | 0.71 | 0.64 | 0.67 | 0.50 | 0.02 |
Notes: (i) for all proteins with crystal structure, the `ligand' means the
natural ligand included in the protein structure; for the last two proteins
built by homology modelling, the `ligand' means the known ligand reported
before, i.e. 10i and AVN-492 (see text).
(ii) equation 1;
(iii) equation 2, n = 8.
Ranki is the rank value of each Schiff base in the virtual screening, which
is determined according to its sequence listed in descending order of total
score values (see Table S22 in the supporting information).
RankA549/Rank4T1 is the rank value of each Schiff base in the A549/4T1
cell growth MTT assays, which is determined according to its sequence listed
in ascending order of IC50 values (see Table 2 and Table S23 in the
supporting information). |