A new polymorph is reported of the pharmaceutically active sulfapyridine derivative, N-(6-methylpyridin-2-yl)mesitylenesulfonamide, in the zwitterionic form 2-methyl-6-{[(2,4,6-trimethylbenzene)sulfonyl]azanidyl}pyridin-1-ium, C15H18N2O2S. The observed dimorphism is solvent dependent. The phase described previously [Beloso, Castro, García-Vázquez, Pérez-Lourido, Romero & Sousa (2003). Z. Anorg. Allg. Chem. 629, 275-284] crystallizes from ethanol and several other organic solvents, whereas the new form described here is obtained as a phase-pure product from methanol. The molecules in both dimorphic phases are very similar and adopt the conformation which is also predicted for an individual molecule by force field calculations. However, the two forms differ in their packing and hydrogen bonding. Results from solvent-assisted grinding indicate that the new form is less stable than the previously published phase.
Supporting information
CCDC reference: 920529
Data collection: SMART (Bruker, 2001); cell refinement: SMART (Bruker, 2001); data reduction: SAINT (Bruker, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2012 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL2012 (Sheldrick, 2008).
2-Methyl-6-{[(2,4,6-trimethylbenzene)sulfonyl]azanidyl}pyridin-1-ium
top
Crystal data top
C15H18N2O2S | Z = 2 |
Mr = 290.37 | F(000) = 308 |
Triclinic, P1 | Dx = 1.383 Mg m−3 |
a = 7.9753 (11) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 8.1446 (11) Å | Cell parameters from 1269 reflections |
c = 11.7776 (16) Å | θ = 2.7–25.4° |
α = 86.829 (3)° | µ = 0.24 mm−1 |
β = 81.600 (3)° | T = 100 K |
γ = 67.124 (3)° | Block, colourless |
V = 697.29 (16) Å3 | 0.19 × 0.10 × 0.09 mm |
Data collection top
Bruker D8 diffractometer with APEX CCD detector | 3195 independent reflections |
Radiation source: Incoatec microsource | 2527 reflections with I > 2σ(I) |
Multilayer optics monochromator | Rint = 0.043 |
ω scans | θmax = 27.8°, θmin = 2.7° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | h = −10→10 |
Tmin = 0.957, Tmax = 0.979 | k = −10→10 |
9103 measured reflections | l = −15→14 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.115 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0461P)2 + 0.4133P] where P = (Fo2 + 2Fc2)/3 |
3195 reflections | (Δ/σ)max < 0.001 |
189 parameters | Δρmax = 0.45 e Å−3 |
0 restraints | Δρmin = −0.39 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R-factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.82705 (7) | 0.55137 (6) | 0.30180 (4) | 0.01535 (14) | |
O1 | 0.92771 (19) | 0.36086 (18) | 0.31141 (12) | 0.0192 (3) | |
O2 | 0.63729 (18) | 0.60458 (19) | 0.28521 (12) | 0.0205 (3) | |
N1 | 0.8318 (2) | 0.8557 (2) | 0.53085 (14) | 0.0159 (4) | |
H1N | 0.902 (3) | 0.772 (3) | 0.570 (2) | 0.020 (6)* | |
N2 | 0.8525 (2) | 0.6346 (2) | 0.41429 (14) | 0.0168 (4) | |
C1 | 0.7867 (3) | 0.8102 (3) | 0.43271 (16) | 0.0159 (4) | |
C2 | 0.7785 (3) | 1.0257 (3) | 0.56965 (17) | 0.0173 (4) | |
C3 | 0.6797 (3) | 1.1637 (3) | 0.50479 (17) | 0.0192 (4) | |
H3 | 0.6436 | 1.2834 | 0.5287 | 0.023* | |
C4 | 0.6325 (3) | 1.1258 (3) | 0.40230 (18) | 0.0200 (4) | |
H4 | 0.5645 | 1.2213 | 0.3564 | 0.024* | |
C5 | 0.6820 (3) | 0.9540 (3) | 0.36666 (17) | 0.0186 (4) | |
H5 | 0.6462 | 0.9314 | 0.2976 | 0.022* | |
C6 | 0.8320 (3) | 1.0474 (3) | 0.68275 (18) | 0.0235 (5) | |
H6A | 0.7837 | 1.1742 | 0.7024 | 0.035* | |
H6B | 0.9662 | 0.9980 | 0.6778 | 0.035* | |
H6C | 0.7811 | 0.9840 | 0.7422 | 0.035* | |
C7 | 0.9465 (3) | 0.6237 (3) | 0.18139 (16) | 0.0147 (4) | |
C8 | 1.1358 (3) | 0.5800 (3) | 0.18110 (17) | 0.0164 (4) | |
C9 | 1.2314 (3) | 0.6356 (3) | 0.08962 (17) | 0.0171 (4) | |
H9 | 1.3583 | 0.6089 | 0.0904 | 0.021* | |
C10 | 1.1491 (3) | 0.7289 (3) | −0.00333 (17) | 0.0179 (4) | |
C11 | 0.9640 (3) | 0.7663 (3) | −0.00193 (17) | 0.0188 (4) | |
H11 | 0.9062 | 0.8285 | −0.0652 | 0.023* | |
C12 | 0.8585 (3) | 0.7172 (3) | 0.08756 (17) | 0.0170 (4) | |
C13 | 1.2450 (3) | 0.4724 (3) | 0.27382 (18) | 0.0198 (4) | |
H13A | 1.3601 | 0.4910 | 0.2691 | 0.030* | |
H13B | 1.2725 | 0.3456 | 0.2630 | 0.030* | |
H13C | 1.1731 | 0.5110 | 0.3493 | 0.030* | |
C14 | 1.2579 (3) | 0.7826 (3) | −0.10316 (18) | 0.0236 (5) | |
H14A | 1.1801 | 0.8970 | −0.1336 | 0.035* | |
H14B | 1.3002 | 0.6915 | −0.1633 | 0.035* | |
H14C | 1.3643 | 0.7943 | −0.0775 | 0.035* | |
C15 | 0.6587 (3) | 0.7662 (3) | 0.07493 (18) | 0.0213 (5) | |
H15A | 0.6326 | 0.8291 | 0.0022 | 0.032* | |
H15B | 0.5807 | 0.8435 | 0.1388 | 0.032* | |
H15C | 0.6334 | 0.6576 | 0.0756 | 0.032* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0155 (3) | 0.0159 (3) | 0.0150 (2) | −0.0066 (2) | −0.00188 (18) | 0.00050 (18) |
O1 | 0.0232 (8) | 0.0151 (7) | 0.0206 (8) | −0.0089 (6) | −0.0042 (6) | 0.0029 (6) |
O2 | 0.0148 (7) | 0.0257 (8) | 0.0215 (8) | −0.0088 (6) | −0.0014 (6) | −0.0003 (6) |
N1 | 0.0155 (8) | 0.0153 (9) | 0.0164 (9) | −0.0057 (7) | −0.0022 (7) | 0.0026 (7) |
N2 | 0.0199 (9) | 0.0156 (9) | 0.0142 (8) | −0.0060 (7) | −0.0031 (7) | 0.0005 (7) |
C1 | 0.0132 (9) | 0.0208 (10) | 0.0136 (9) | −0.0077 (8) | 0.0013 (7) | 0.0004 (8) |
C2 | 0.0142 (9) | 0.0183 (10) | 0.0182 (10) | −0.0059 (8) | 0.0014 (8) | −0.0020 (8) |
C3 | 0.0187 (10) | 0.0166 (10) | 0.0201 (10) | −0.0053 (8) | 0.0009 (8) | −0.0011 (8) |
C4 | 0.0170 (10) | 0.0180 (11) | 0.0207 (11) | −0.0032 (8) | −0.0012 (8) | 0.0049 (8) |
C5 | 0.0164 (10) | 0.0217 (11) | 0.0155 (10) | −0.0056 (8) | −0.0016 (8) | 0.0013 (8) |
C6 | 0.0269 (12) | 0.0210 (11) | 0.0228 (11) | −0.0084 (9) | −0.0054 (9) | −0.0016 (9) |
C7 | 0.0171 (10) | 0.0134 (10) | 0.0139 (9) | −0.0065 (8) | −0.0010 (8) | −0.0008 (7) |
C8 | 0.0183 (10) | 0.0128 (10) | 0.0179 (10) | −0.0054 (8) | −0.0022 (8) | −0.0026 (8) |
C9 | 0.0137 (9) | 0.0188 (10) | 0.0195 (10) | −0.0069 (8) | −0.0008 (8) | −0.0028 (8) |
C10 | 0.0231 (11) | 0.0156 (10) | 0.0157 (10) | −0.0087 (8) | −0.0004 (8) | −0.0021 (8) |
C11 | 0.0227 (11) | 0.0171 (10) | 0.0153 (10) | −0.0056 (9) | −0.0051 (8) | 0.0015 (8) |
C12 | 0.0177 (10) | 0.0154 (10) | 0.0173 (10) | −0.0052 (8) | −0.0036 (8) | −0.0018 (8) |
C13 | 0.0168 (10) | 0.0198 (11) | 0.0220 (11) | −0.0060 (9) | −0.0047 (8) | 0.0037 (8) |
C14 | 0.0267 (11) | 0.0254 (12) | 0.0207 (11) | −0.0139 (10) | 0.0013 (9) | 0.0004 (9) |
C15 | 0.0206 (11) | 0.0251 (12) | 0.0178 (10) | −0.0074 (9) | −0.0064 (8) | 0.0022 (9) |
Geometric parameters (Å, º) top
S1—O1 | 1.4504 (15) | C7—C12 | 1.418 (3) |
S1—O2 | 1.4434 (14) | C8—C9 | 1.386 (3) |
S1—N2 | 1.5940 (17) | C8—C13 | 1.516 (3) |
S1—C7 | 1.793 (2) | C9—C10 | 1.392 (3) |
N1—C2 | 1.365 (3) | C9—H9 | 0.9500 |
N1—C1 | 1.370 (3) | C10—C11 | 1.384 (3) |
N1—H1N | 0.86 (2) | C10—C14 | 1.506 (3) |
N2—C1 | 1.336 (3) | C11—C12 | 1.391 (3) |
C1—C5 | 1.415 (3) | C11—H11 | 0.9500 |
C2—C3 | 1.364 (3) | C12—C15 | 1.513 (3) |
C2—C6 | 1.496 (3) | C13—H13A | 0.9800 |
C3—C4 | 1.400 (3) | C13—H13B | 0.9800 |
C3—H3 | 0.9500 | C13—H13C | 0.9800 |
C4—C5 | 1.370 (3) | C14—H14A | 0.9800 |
C4—H4 | 0.9500 | C14—H14B | 0.9800 |
C5—H5 | 0.9500 | C14—H14C | 0.9800 |
C6—H6A | 0.9800 | C15—H15A | 0.9800 |
C6—H6B | 0.9800 | C15—H15B | 0.9800 |
C6—H6C | 0.9800 | C15—H15C | 0.9800 |
C7—C8 | 1.410 (3) | | |
| | | |
O1—S1—O2 | 115.15 (9) | C9—C8—C7 | 118.65 (18) |
O1—S1—N2 | 105.04 (9) | C9—C8—C13 | 116.94 (17) |
O2—S1—N2 | 113.34 (9) | C7—C8—C13 | 124.40 (18) |
O1—S1—C7 | 106.20 (9) | C8—C9—C10 | 122.68 (18) |
O2—S1—C7 | 109.16 (9) | C8—C9—H9 | 118.7 |
N2—S1—C7 | 107.44 (9) | C10—C9—H9 | 118.7 |
C2—N1—C1 | 124.98 (18) | C11—C10—C9 | 117.36 (18) |
C2—N1—H1N | 117.0 (15) | C11—C10—C14 | 121.18 (18) |
C1—N1—H1N | 118.0 (15) | C9—C10—C14 | 121.43 (18) |
C1—N2—S1 | 122.42 (14) | C10—C11—C12 | 123.24 (19) |
N2—C1—N1 | 113.68 (17) | C10—C11—H11 | 118.4 |
N2—C1—C5 | 130.48 (19) | C12—C11—H11 | 118.4 |
N1—C1—C5 | 115.83 (18) | C11—C12—C7 | 117.89 (18) |
C3—C2—N1 | 118.79 (19) | C11—C12—C15 | 116.56 (18) |
C3—C2—C6 | 124.28 (19) | C7—C12—C15 | 125.54 (18) |
N1—C2—C6 | 116.93 (18) | C8—C13—H13A | 109.5 |
C2—C3—C4 | 118.86 (19) | C8—C13—H13B | 109.5 |
C2—C3—H3 | 120.6 | H13A—C13—H13B | 109.5 |
C4—C3—H3 | 120.6 | C8—C13—H13C | 109.5 |
C5—C4—C3 | 121.48 (19) | H13A—C13—H13C | 109.5 |
C5—C4—H4 | 119.3 | H13B—C13—H13C | 109.5 |
C3—C4—H4 | 119.3 | C10—C14—H14A | 109.5 |
C4—C5—C1 | 119.99 (19) | C10—C14—H14B | 109.5 |
C4—C5—H5 | 120.0 | H14A—C14—H14B | 109.5 |
C1—C5—H5 | 120.0 | C10—C14—H14C | 109.5 |
C2—C6—H6A | 109.5 | H14A—C14—H14C | 109.5 |
C2—C6—H6B | 109.5 | H14B—C14—H14C | 109.5 |
H6A—C6—H6B | 109.5 | C12—C15—H15A | 109.5 |
C2—C6—H6C | 109.5 | C12—C15—H15B | 109.5 |
H6A—C6—H6C | 109.5 | H15A—C15—H15B | 109.5 |
H6B—C6—H6C | 109.5 | C12—C15—H15C | 109.5 |
C8—C7—C12 | 120.14 (18) | H15A—C15—H15C | 109.5 |
C8—C7—S1 | 117.37 (14) | H15B—C15—H15C | 109.5 |
C12—C7—S1 | 122.46 (15) | | |
| | | |
O1—S1—N2—C1 | 176.23 (15) | O1—S1—C7—C12 | 124.46 (16) |
O2—S1—N2—C1 | −57.23 (18) | N2—S1—C7—C12 | −123.54 (17) |
C7—S1—N2—C1 | 63.45 (17) | C12—C7—C8—C9 | 2.2 (3) |
S1—N2—C1—N1 | −176.39 (13) | S1—C7—C8—C9 | −179.41 (14) |
S1—N2—C1—C5 | 2.4 (3) | C12—C7—C8—C13 | −176.71 (18) |
C2—N1—C1—N2 | −178.80 (17) | S1—C7—C8—C13 | 1.7 (3) |
C2—N1—C1—C5 | 2.2 (3) | C7—C8—C9—C10 | −1.7 (3) |
C1—N1—C2—C3 | −3.1 (3) | C13—C8—C9—C10 | 177.32 (18) |
C1—N1—C2—C6 | 176.22 (18) | C8—C9—C10—C11 | 0.2 (3) |
N1—C2—C3—C4 | 1.6 (3) | C8—C9—C10—C14 | −178.12 (18) |
C6—C2—C3—C4 | −177.67 (19) | C9—C10—C11—C12 | 0.8 (3) |
C2—C3—C4—C5 | 0.5 (3) | C14—C10—C11—C12 | 179.10 (19) |
C3—C4—C5—C1 | −1.3 (3) | C10—C11—C12—C7 | −0.3 (3) |
N2—C1—C5—C4 | −178.71 (19) | C10—C11—C12—C15 | −179.20 (19) |
N1—C1—C5—C4 | 0.0 (3) | C8—C7—C12—C11 | −1.3 (3) |
O1—S1—C7—C8 | −53.92 (17) | S1—C7—C12—C11 | −179.59 (14) |
O2—S1—C7—C8 | −178.64 (14) | C8—C7—C12—C15 | 177.58 (18) |
N2—S1—C7—C8 | 58.08 (17) | S1—C7—C12—C15 | −0.8 (3) |
O2—S1—C7—C12 | −0.26 (19) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O1i | 0.86 (2) | 2.05 (2) | 2.879 (2) | 161.9 |
Symmetry code: (i) −x+2, −y+1, −z+1. |
Comparison of the experimentally observed molecular conformation in form (I)
(Beloso et al., 2003; average over two independent molecules),
in form
(II) (this work) and for the minimum-energy conformation (force field
calculations). topTorsion angle (°) | X-ray (I) | X-ray (II) | Force field minimum |
N1—C1—N2—S1 | -177.3 | -176.39 (13) | -177.5 |
C1—N2—S1—C7 | 62.1 | 63.45 (17) | 61.1 |
N2—S1—C7—C8 | 54.9 | 58.08 (17) | 41.8 |