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1-Benzofuran-2,3-dicarboxylic acid (C10H6O5) is a dicarboxylic acid ligand which can readily engage in organometallic complexes with various metal ions. This ligand is characterized by an intramolecular hydrogen bond between the two carboxyl residues, and, as a monoanionic species, readily forms supramolecular adducts with different organic and inorganic cations. These are a 1:1 adduct with the dimethylammonium cation, namely dimethylammonium 3-carboxy-1-benzofuran-2-carboxylate, C2H8N+·C10H5O5−, (I), a 2:1 complex with Cu2+ ions in which four neutral imidazole molecules also coordinate the metal atom, namely bis(3-carboxy-1-benzofuran-2-carboxylato-κO3)tetrakis(1H-imidazole-κN3)copper(II), [Cu(C10H5O5)2(C3H4N2)4], (II), and a 4:1 adduct with [La(H2O)7]3+ ions, namely heptaaquabis(3-carboxy-1-benzofuran-2-carboxylato-κO3)lanthanum 3-carboxy-1-benzofuran-2-carboxylate 1-benzofuran-2,3-dicarboxylic acid solvate tetrahydrate, [La(C10H5O5)2(H2O)7](C10H5O5)·C10H6O5·4H2O, (III). In the crystal structure, complex (II) resides on inversion centres, while complex (III) resides on axes of twofold rotation. The crystal packing in all three structures reveals π–π stacking interactions between the planar aromatic benzofuran residues, as well as hydrogen bonding between the components. The significance of this study lies in the first crystallographic characterization of the title framework, which consistently exhibits the presence of an intramolecular hydrogen bond and a consequent monoanionic-only nature. It shows further that the anion can coordinate readily to metal cations as a ligand, as well as acting as a monovalent counter-ion. Finally, the aromaticity of the flat benzofuran residue provides an additional supramolecular synthon that directs and facilitates the crystal packing of compounds (I)–(III).
Supporting information
CCDC references: 718112; 718113; 718114
The title dicarboxylic acid, BFDC, as well as all the other reactants and
solvents used, were obtained commercially.
Compound (I) was obtained by heating a mixture of La(NO3)3.6H2O (0.130 g,
0.3 mmol), the BFDC acid (0.124 g, 0.6 mmol) and
N,N'-dimethylformamide (DMF; 3 ml) in a sealed 5 ml reactor at
433 K for 48 h, followed by gradual cooling to ambient temperature. Colourless
needles of (I) were collected by filtration and air-dried, without
incorporation of any lanthanum ions. Needle-shaped crystals of (III) were
obtained by a similar procedure, omitting the DMF component from the reaction
mixture.
Blue crystals of (II) were obtained by the following procedure. A solution of
Cu(NO3)2.2.5H2O (0.058 g, 0.25 mmol) in H2O (4 ml) was added to a
suspension of the BFDC acid (0.052 g, 0.25 mmol) in H2O (7 ml), followed by
dropwise addition of imidazole (0.068 g, 1 mmol) in DMF (2 ml) under
continuous stirring at about 333 K. The resulting blue-coloured mixture was
cooled to room temperature and filtered. Crystals of (II) were obtained
how?
The hydrogen atoms bound to C-atoms were located in calculated positions, and
were constrained to ride on their parent atoms with C—H distances of 0.95
and 0.98 Å and with Uiso(H) = 1.2 and 1.5 Ueq(C),
respectively. In (I), H-atoms bound to O and N were located in
difference-Fourier maps. Their coordinates were included in the refinement,
but assigned Uiso(H) = 1.2 Ueq(O/N). In (II), the H-atom
bound to N(imidazole) was placed in calculated position at N—H = 0.88 Å, while the H-atom bound to O was located in a difference-Fourier map. The
two atoms were assigned Uiso(H) = 1.2 Ueq(O/N), but their
atomic parameters were not refined. In (III), the H-atoms bound to O3, O4, and
O5 were located in difference-Fourier maps. Those attached to O2, O7 and O22
could not be located reliably; they were placed in calculated positions to
optimize the O2···O28(at -x+3/4, y+1/4, z-1/4), O7···O12 and O22···O27
hydrogen bonds, respectively. Charge-balance considerations and the symmetry
features of this structure required that the noncoordinated BFDC moiety is
only partially deprotonated (i.e. deprotonation occurs in 50% of these
fragments). The additional H atom (with 50% occupancy) bound to either O27 or
O28 of the noncoordinated ligand could not be clearly located (though most
probably it should be there) in difference Fourier maps. The corresponding
O—H distances were then restrained to O—H = 0.90 (2)Å, and assigned
Uiso(H) = 1.5 Ueq(O). Their atomic parameters were not
refined in the final least-squares calculations. Nevertheless, presence of
weak peaks of residual density between atoms O7 and O12 and O22 and O27 may
indicate that the H-bond in these two species is partially delocalized.
Compound (III) crystallized as a hydrate in the space group Fdd2 and represents
a racemic twin. The water solvent incorporated into the crystal lattice could
not be reliably characterized by discrete atoms (possibly due to its location
on, and apparent disorder about, special positions). Conventional refinement
with the solvent excluded converged at R1 = 0.071, the difference Fourier
electron-density map revealing four significant peaks within 1.9–2.6 e Å3
related to the solvent. This relatively low R factor attests to the essential
correctness of the main structural model in (III). The contribution of the
water solvent was thus subtracted from the diffraction data by the SQUEEZE
procedure in PLATON (Spek, 2003), which led to R1 = 0.049. These calculations
showed that there are eight voids per cell of 200Å3 each. The residual
electron count was assessed to be 304 e per cell, which corresponds nicely with
four water molecules per void (two water species per asymmetric unit).
For all compounds, data collection: COLLECT (Nonius, 1999); cell refinement: DENZO (Otwinowski & Minor, 1997); data reduction: DENZO (Otwinowski & Minor, 1997); program(s) used to solve structure: SIR97 (Altomare et al., 1994); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996) and Mercury (Macrae et al., 2006); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
(I) Dimethylammonium 3-carboxy-1-benzofuran-2-carboxylate
top
Crystal data top
C2H8N+·C10H5O5− | Z = 2 |
Mr = 251.23 | F(000) = 264 |
Triclinic, P1 | Dx = 1.433 Mg m−3 |
a = 8.3381 (4) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 8.6806 (3) Å | Cell parameters from 2231 reflections |
c = 8.8521 (5) Å | θ = 2.5–26.5° |
α = 68.4693 (17)° | µ = 0.11 mm−1 |
β = 78.8197 (17)° | T = 110 K |
γ = 81.035 (4)° | Rod, colourless |
V = 582.17 (5) Å3 | 0.40 × 0.20 × 0.20 mm |
Data collection top
Nonius KappaCCD area-detector diffractometer | 1822 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.047 |
Graphite monochromator | θmax = 26.5°, θmin = 2.5° |
Detector resolution: 12.8 pixels mm-1 | h = −10→10 |
1 deg. ω scans | k = −10→10 |
7187 measured reflections | l = −11→10 |
2385 independent reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.116 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0573P)2 + 0.1431P] where P = (Fo2 + 2Fc2)/3 |
2385 reflections | (Δ/σ)max < 0.001 |
174 parameters | Δρmax = 0.20 e Å−3 |
0 restraints | Δρmin = −0.24 e Å−3 |
Crystal data top
C2H8N+·C10H5O5− | γ = 81.035 (4)° |
Mr = 251.23 | V = 582.17 (5) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.3381 (4) Å | Mo Kα radiation |
b = 8.6806 (3) Å | µ = 0.11 mm−1 |
c = 8.8521 (5) Å | T = 110 K |
α = 68.4693 (17)° | 0.40 × 0.20 × 0.20 mm |
β = 78.8197 (17)° | |
Data collection top
Nonius KappaCCD area-detector diffractometer | 1822 reflections with I > 2σ(I) |
7187 measured reflections | Rint = 0.047 |
2385 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.116 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.20 e Å−3 |
2385 reflections | Δρmin = −0.24 e Å−3 |
174 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.28497 (14) | 0.93720 (14) | 0.37042 (13) | 0.0200 (3) | |
C2 | 0.1787 (2) | 1.0766 (2) | 0.31200 (19) | 0.0187 (4) | |
C3 | 0.1226 (2) | 1.1286 (2) | 0.1615 (2) | 0.0238 (4) | |
H3 | 0.1564 | 1.0706 | 0.0865 | 0.029* | |
C4 | 0.0139 (2) | 1.2711 (2) | 0.1283 (2) | 0.0262 (4) | |
H4 | −0.0290 | 1.3123 | 0.0275 | 0.031* | |
C5 | −0.0340 (2) | 1.3557 (2) | 0.2396 (2) | 0.0263 (4) | |
H5 | −0.1087 | 1.4529 | 0.2124 | 0.032* | |
C6 | 0.0244 (2) | 1.3019 (2) | 0.3881 (2) | 0.0241 (4) | |
H6 | −0.0088 | 1.3605 | 0.4626 | 0.029* | |
C7 | 0.1341 (2) | 1.1583 (2) | 0.42515 (19) | 0.0199 (4) | |
C8 | 0.21973 (19) | 1.0612 (2) | 0.56235 (19) | 0.0196 (4) | |
C9 | 0.2088 (2) | 1.1041 (2) | 0.7129 (2) | 0.0240 (4) | |
O10 | 0.12543 (16) | 1.22824 (17) | 0.72588 (16) | 0.0316 (3) | |
O11 | 0.29268 (17) | 1.00405 (17) | 0.82984 (14) | 0.0292 (3) | |
H11 | 0.351 (3) | 0.912 (3) | 0.799 (2) | 0.035* | |
C12 | 0.3067 (2) | 0.9306 (2) | 0.52302 (19) | 0.0194 (4) | |
C13 | 0.4126 (2) | 0.7817 (2) | 0.6104 (2) | 0.0208 (4) | |
O14 | 0.43702 (15) | 0.76548 (15) | 0.75211 (14) | 0.0267 (3) | |
O15 | 0.46973 (15) | 0.68096 (15) | 0.53758 (14) | 0.0254 (3) | |
N16 | 0.42923 (18) | 0.6289 (2) | 0.25612 (18) | 0.0231 (3) | |
H16A | 0.422 (2) | 0.685 (3) | 0.320 (2) | 0.028* | |
H16B | 0.461 (2) | 0.517 (3) | 0.320 (2) | 0.028* | |
C17 | 0.2688 (2) | 0.6422 (3) | 0.2019 (3) | 0.0346 (5) | |
H17A | 0.2760 | 0.5708 | 0.1365 | 0.052* | |
H17B | 0.2398 | 0.7579 | 0.1350 | 0.052* | |
H17C | 0.1842 | 0.6068 | 0.2982 | 0.052* | |
C18 | 0.5617 (2) | 0.6885 (3) | 0.1173 (2) | 0.0311 (4) | |
H18A | 0.5317 | 0.8044 | 0.0516 | 0.047* | |
H18B | 0.5775 | 0.6194 | 0.0485 | 0.047* | |
H18C | 0.6639 | 0.6815 | 0.1596 | 0.047* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0236 (6) | 0.0206 (6) | 0.0170 (6) | −0.0010 (5) | −0.0043 (5) | −0.0077 (5) |
C2 | 0.0181 (8) | 0.0175 (8) | 0.0198 (8) | −0.0035 (7) | −0.0025 (6) | −0.0050 (6) |
C3 | 0.0241 (9) | 0.0273 (9) | 0.0185 (8) | −0.0084 (8) | −0.0010 (7) | −0.0048 (7) |
C4 | 0.0252 (9) | 0.0282 (9) | 0.0207 (8) | −0.0077 (8) | −0.0052 (7) | −0.0002 (7) |
C5 | 0.0201 (9) | 0.0215 (9) | 0.0313 (10) | −0.0018 (7) | −0.0042 (7) | −0.0021 (7) |
C6 | 0.0217 (9) | 0.0224 (9) | 0.0268 (9) | −0.0029 (7) | −0.0009 (7) | −0.0080 (7) |
C7 | 0.0182 (8) | 0.0201 (9) | 0.0208 (8) | −0.0063 (7) | −0.0009 (7) | −0.0056 (7) |
C8 | 0.0181 (8) | 0.0213 (9) | 0.0198 (8) | −0.0056 (7) | −0.0018 (6) | −0.0066 (7) |
C9 | 0.0224 (9) | 0.0276 (10) | 0.0254 (9) | −0.0051 (8) | −0.0016 (7) | −0.0131 (7) |
O10 | 0.0302 (7) | 0.0361 (8) | 0.0362 (7) | 0.0035 (6) | −0.0072 (6) | −0.0230 (6) |
O11 | 0.0360 (8) | 0.0341 (8) | 0.0224 (6) | 0.0027 (6) | −0.0092 (5) | −0.0155 (6) |
C12 | 0.0225 (9) | 0.0224 (9) | 0.0153 (8) | −0.0063 (7) | −0.0018 (6) | −0.0078 (6) |
C13 | 0.0223 (9) | 0.0211 (9) | 0.0204 (8) | −0.0052 (7) | −0.0035 (7) | −0.0071 (7) |
O14 | 0.0316 (7) | 0.0287 (7) | 0.0216 (6) | 0.0015 (6) | −0.0089 (5) | −0.0102 (5) |
O15 | 0.0309 (7) | 0.0221 (7) | 0.0247 (6) | 0.0032 (5) | −0.0070 (5) | −0.0107 (5) |
N16 | 0.0276 (8) | 0.0221 (8) | 0.0221 (7) | −0.0008 (6) | −0.0053 (6) | −0.0105 (6) |
C17 | 0.0238 (10) | 0.0394 (11) | 0.0453 (12) | −0.0048 (9) | −0.0062 (8) | −0.0188 (9) |
C18 | 0.0268 (10) | 0.0380 (11) | 0.0303 (10) | −0.0084 (8) | −0.0028 (8) | −0.0123 (8) |
Geometric parameters (Å, º) top
O1—C12 | 1.3768 (19) | C9—O11 | 1.322 (2) |
O1—C2 | 1.379 (2) | O11—H11 | 0.97 (2) |
C2—C3 | 1.390 (2) | C12—C13 | 1.491 (2) |
C2—C7 | 1.392 (2) | C13—O15 | 1.254 (2) |
C3—C4 | 1.387 (3) | C13—O14 | 1.263 (2) |
C3—H3 | 0.9500 | N16—C18 | 1.478 (2) |
C4—C5 | 1.399 (3) | N16—C17 | 1.481 (2) |
C4—H4 | 0.9500 | N16—H16A | 0.87 (2) |
C5—C6 | 1.381 (3) | N16—H16B | 0.96 (2) |
C5—H5 | 0.9500 | C17—H17A | 0.9800 |
C6—C7 | 1.400 (2) | C17—H17B | 0.9800 |
C6—H6 | 0.9500 | C17—H17C | 0.9800 |
C7—C8 | 1.447 (2) | C18—H18A | 0.9800 |
C8—C12 | 1.366 (2) | C18—H18B | 0.9800 |
C8—C9 | 1.493 (2) | C18—H18C | 0.9800 |
C9—O10 | 1.218 (2) | | |
| | | |
C12—O1—C2 | 106.06 (12) | C9—O11—H11 | 110.0 (12) |
O1—C2—C3 | 124.94 (15) | C8—C12—O1 | 111.52 (14) |
O1—C2—C7 | 110.65 (14) | C8—C12—C13 | 134.43 (15) |
C3—C2—C7 | 124.40 (17) | O1—C12—C13 | 114.00 (14) |
C4—C3—C2 | 115.40 (17) | O15—C13—O14 | 124.86 (16) |
C4—C3—H3 | 122.3 | O15—C13—C12 | 117.21 (15) |
C2—C3—H3 | 122.3 | O14—C13—C12 | 117.92 (15) |
C3—C4—C5 | 121.63 (17) | C18—N16—C17 | 112.67 (14) |
C3—C4—H4 | 119.2 | C18—N16—H16A | 108.8 (13) |
C5—C4—H4 | 119.2 | C17—N16—H16A | 110.0 (13) |
C6—C5—C4 | 121.80 (17) | C18—N16—H16B | 108.4 (11) |
C6—C5—H5 | 119.1 | C17—N16—H16B | 111.2 (12) |
C4—C5—H5 | 119.1 | H16A—N16—H16B | 105.5 (18) |
C5—C6—C7 | 117.89 (17) | N16—C17—H17A | 109.5 |
C5—C6—H6 | 121.1 | N16—C17—H17B | 109.5 |
C7—C6—H6 | 121.1 | H17A—C17—H17B | 109.5 |
C2—C7—C6 | 118.87 (16) | N16—C17—H17C | 109.5 |
C2—C7—C8 | 105.50 (15) | H17A—C17—H17C | 109.5 |
C6—C7—C8 | 135.62 (17) | H17B—C17—H17C | 109.5 |
C12—C8—C7 | 106.26 (14) | N16—C18—H18A | 109.5 |
C12—C8—C9 | 129.68 (16) | N16—C18—H18B | 109.5 |
C7—C8—C9 | 124.06 (16) | H18A—C18—H18B | 109.5 |
O10—C9—O11 | 121.56 (16) | N16—C18—H18C | 109.5 |
O10—C9—C8 | 120.51 (16) | H18A—C18—H18C | 109.5 |
O11—C9—C8 | 117.93 (16) | H18B—C18—H18C | 109.5 |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O11—H11···O14 | 0.97 (2) | 1.51 (2) | 2.4817 (19) | 178 (2) |
N16—H16A···O15 | 0.87 (2) | 2.02 (2) | 2.7798 (19) | 145.2 (18) |
N16—H16A···O1 | 0.87 (2) | 2.45 (2) | 3.185 (2) | 142.9 (17) |
N16—H16B···O15i | 0.96 (2) | 1.80 (2) | 2.750 (2) | 171.0 (18) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
(II) Bis(3-carboxy-1-benzofuran-2-carboxylato-
κO
3)tetrakis(1H-imidazole-
κN
3)copper(II)
top
Crystal data top
[Cu(C10H5O5)2(C3H4N2)4] | Z = 1 |
Mr = 746.15 | F(000) = 383 |
Triclinic, P1 | Dx = 1.555 Mg m−3 |
a = 8.1383 (2) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 9.9782 (3) Å | Cell parameters from 2893 reflections |
c = 11.3225 (2) Å | θ = 3.0–27.9° |
α = 107.5049 (12)° | µ = 0.76 mm−1 |
β = 108.4826 (14)° | T = 110 K |
γ = 99.4472 (9)° | Rod, blue |
V = 796.68 (4) Å3 | 0.45 × 0.30 × 0.25 mm |
Data collection top
Nonius KappaCCD area-detector diffractometer | 3753 independent reflections |
Radiation source: fine-focus sealed tube | 3386 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
Detector resolution: 12.8 pixels mm-1 | θmax = 27.9°, θmin = 3.0° |
1 deg. ϕ and ω scans | h = 0→10 |
Absorption correction: multi-scan (Blessing, 1995) | k = −13→12 |
Tmin = 0.726, Tmax = 0.833 | l = −14→13 |
8773 measured reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.037 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.097 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.047P)2 + 0.6699P] where P = (Fo2 + 2Fc2)/3 |
3753 reflections | (Δ/σ)max < 0.001 |
232 parameters | Δρmax = 0.39 e Å−3 |
0 restraints | Δρmin = −0.62 e Å−3 |
Crystal data top
[Cu(C10H5O5)2(C3H4N2)4] | γ = 99.4472 (9)° |
Mr = 746.15 | V = 796.68 (4) Å3 |
Triclinic, P1 | Z = 1 |
a = 8.1383 (2) Å | Mo Kα radiation |
b = 9.9782 (3) Å | µ = 0.76 mm−1 |
c = 11.3225 (2) Å | T = 110 K |
α = 107.5049 (12)° | 0.45 × 0.30 × 0.25 mm |
β = 108.4826 (14)° | |
Data collection top
Nonius KappaCCD area-detector diffractometer | 3753 independent reflections |
Absorption correction: multi-scan (Blessing, 1995) | 3386 reflections with I > 2σ(I) |
Tmin = 0.726, Tmax = 0.833 | Rint = 0.023 |
8773 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.037 | 0 restraints |
wR(F2) = 0.097 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.39 e Å−3 |
3753 reflections | Δρmin = −0.62 e Å−3 |
232 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cu1 | 0.0000 | 0.0000 | 0.0000 | 0.01492 (10) | |
N2 | −0.1003 (2) | 0.14435 (16) | 0.10111 (14) | 0.0161 (3) | |
C3 | −0.0127 (2) | 0.26220 (19) | 0.21309 (17) | 0.0176 (3) | |
H3 | 0.1132 | 0.2892 | 0.2654 | 0.021* | |
N4 | −0.1246 (2) | 0.33810 (17) | 0.24289 (15) | 0.0190 (3) | |
H4 | −0.0950 | 0.4194 | 0.3131 | 0.023* | |
C5 | −0.2946 (3) | 0.2662 (2) | 0.14391 (18) | 0.0208 (4) | |
H5 | −0.4019 | 0.2948 | 0.1376 | 0.025* | |
C6 | −0.2783 (2) | 0.1463 (2) | 0.05704 (18) | 0.0194 (4) | |
H6 | −0.3742 | 0.0751 | −0.0215 | 0.023* | |
N7 | 0.1092 (2) | 0.15281 (16) | −0.05753 (14) | 0.0163 (3) | |
C8 | 0.2159 (3) | 0.2953 (2) | 0.01880 (18) | 0.0213 (4) | |
H8 | 0.2724 | 0.3365 | 0.1142 | 0.026* | |
C9 | 0.2272 (3) | 0.3676 (2) | −0.06459 (19) | 0.0257 (4) | |
H9 | 0.2913 | 0.4670 | −0.0390 | 0.031* | |
N10 | 0.1270 (2) | 0.26745 (18) | −0.19280 (16) | 0.0219 (3) | |
H10 | 0.1103 | 0.2836 | −0.2674 | 0.026* | |
C11 | 0.0593 (3) | 0.1408 (2) | −0.18408 (18) | 0.0200 (4) | |
H11 | −0.0150 | 0.0535 | −0.2592 | 0.024* | |
O12 | 0.27000 (17) | 0.07457 (14) | 0.20648 (12) | 0.0204 (3) | |
C13 | 0.4126 (2) | 0.16088 (19) | 0.29453 (16) | 0.0155 (3) | |
O14 | 0.44501 (17) | 0.30256 (14) | 0.32920 (12) | 0.0181 (3) | |
H14 | 0.5612 | 0.3544 | 0.3987 | 0.022* | |
C15 | 0.5536 (2) | 0.10199 (18) | 0.36470 (16) | 0.0140 (3) | |
C16 | 0.5292 (2) | −0.05151 (18) | 0.34538 (16) | 0.0151 (3) | |
C17 | 0.3887 (2) | −0.1824 (2) | 0.26711 (17) | 0.0187 (3) | |
H17 | 0.2769 | −0.1834 | 0.2058 | 0.022* | |
C18 | 0.4188 (3) | −0.3100 (2) | 0.28246 (19) | 0.0223 (4) | |
H18 | 0.3250 | −0.3996 | 0.2311 | 0.027* | |
C19 | 0.5835 (3) | −0.3109 (2) | 0.37144 (19) | 0.0217 (4) | |
H19 | 0.5987 | −0.4008 | 0.3789 | 0.026* | |
C20 | 0.7249 (3) | −0.1830 (2) | 0.44888 (18) | 0.0187 (3) | |
H20 | 0.8373 | −0.1822 | 0.5094 | 0.022* | |
C21 | 0.6917 (2) | −0.05642 (18) | 0.43239 (16) | 0.0152 (3) | |
O22 | 0.81303 (16) | 0.08149 (13) | 0.50042 (12) | 0.0156 (2) | |
C23 | 0.7251 (2) | 0.17508 (18) | 0.45845 (16) | 0.0142 (3) | |
C24 | 0.8332 (2) | 0.33294 (19) | 0.52317 (16) | 0.0148 (3) | |
O25 | 0.99497 (17) | 0.36447 (14) | 0.59757 (12) | 0.0177 (3) | |
O26 | 0.75168 (17) | 0.42565 (13) | 0.49777 (13) | 0.0185 (3) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cu1 | 0.01893 (16) | 0.01223 (16) | 0.01287 (15) | 0.00474 (11) | 0.00538 (11) | 0.00448 (11) |
N2 | 0.0193 (7) | 0.0133 (7) | 0.0149 (7) | 0.0047 (6) | 0.0059 (6) | 0.0050 (5) |
C3 | 0.0198 (8) | 0.0149 (8) | 0.0157 (8) | 0.0046 (7) | 0.0060 (6) | 0.0039 (6) |
N4 | 0.0235 (8) | 0.0154 (7) | 0.0181 (7) | 0.0062 (6) | 0.0096 (6) | 0.0044 (6) |
C5 | 0.0194 (9) | 0.0228 (9) | 0.0210 (9) | 0.0076 (7) | 0.0088 (7) | 0.0076 (7) |
C6 | 0.0167 (8) | 0.0205 (9) | 0.0181 (8) | 0.0035 (7) | 0.0053 (7) | 0.0058 (7) |
N7 | 0.0186 (7) | 0.0145 (7) | 0.0144 (7) | 0.0051 (6) | 0.0049 (5) | 0.0052 (5) |
C8 | 0.0259 (9) | 0.0180 (9) | 0.0155 (8) | 0.0021 (7) | 0.0046 (7) | 0.0062 (7) |
C9 | 0.0310 (10) | 0.0197 (9) | 0.0228 (9) | 0.0013 (8) | 0.0074 (8) | 0.0095 (7) |
N10 | 0.0257 (8) | 0.0242 (8) | 0.0177 (7) | 0.0056 (7) | 0.0079 (6) | 0.0119 (6) |
C11 | 0.0223 (9) | 0.0210 (9) | 0.0160 (8) | 0.0051 (7) | 0.0069 (7) | 0.0076 (7) |
O12 | 0.0190 (6) | 0.0200 (6) | 0.0157 (6) | 0.0049 (5) | −0.0004 (5) | 0.0060 (5) |
C13 | 0.0189 (8) | 0.0180 (8) | 0.0113 (7) | 0.0072 (7) | 0.0057 (6) | 0.0067 (6) |
O14 | 0.0198 (6) | 0.0151 (6) | 0.0174 (6) | 0.0064 (5) | 0.0031 (5) | 0.0071 (5) |
C15 | 0.0175 (8) | 0.0138 (8) | 0.0104 (7) | 0.0053 (6) | 0.0047 (6) | 0.0049 (6) |
C16 | 0.0191 (8) | 0.0137 (8) | 0.0129 (7) | 0.0054 (6) | 0.0069 (6) | 0.0048 (6) |
C17 | 0.0212 (8) | 0.0164 (8) | 0.0161 (8) | 0.0042 (7) | 0.0065 (7) | 0.0046 (6) |
C18 | 0.0294 (10) | 0.0138 (8) | 0.0211 (9) | 0.0024 (7) | 0.0111 (7) | 0.0039 (7) |
C19 | 0.0328 (10) | 0.0137 (8) | 0.0256 (9) | 0.0108 (7) | 0.0165 (8) | 0.0091 (7) |
C20 | 0.0245 (9) | 0.0187 (8) | 0.0195 (8) | 0.0115 (7) | 0.0118 (7) | 0.0097 (7) |
C21 | 0.0189 (8) | 0.0132 (8) | 0.0144 (8) | 0.0050 (6) | 0.0074 (6) | 0.0049 (6) |
O22 | 0.0169 (6) | 0.0129 (6) | 0.0163 (6) | 0.0054 (5) | 0.0036 (5) | 0.0067 (5) |
C23 | 0.0179 (8) | 0.0144 (8) | 0.0139 (7) | 0.0081 (7) | 0.0067 (6) | 0.0079 (6) |
C24 | 0.0180 (8) | 0.0144 (8) | 0.0117 (7) | 0.0042 (6) | 0.0061 (6) | 0.0046 (6) |
O25 | 0.0168 (6) | 0.0162 (6) | 0.0165 (6) | 0.0031 (5) | 0.0036 (5) | 0.0054 (5) |
O26 | 0.0207 (6) | 0.0133 (6) | 0.0204 (6) | 0.0060 (5) | 0.0050 (5) | 0.0072 (5) |
Geometric parameters (Å, º) top
Cu1—N2i | 2.0095 (14) | O12—C13 | 1.226 (2) |
Cu1—N2 | 2.0095 (14) | C13—O14 | 1.304 (2) |
Cu1—N7 | 2.0146 (15) | C13—C15 | 1.489 (2) |
Cu1—N7i | 2.0146 (15) | O14—H14 | 0.9508 |
N2—C3 | 1.324 (2) | C15—C23 | 1.367 (2) |
N2—C6 | 1.380 (2) | C15—C16 | 1.451 (2) |
C3—N4 | 1.336 (2) | C16—C21 | 1.395 (2) |
C3—H3 | 0.9500 | C16—C17 | 1.403 (2) |
N4—C5 | 1.375 (2) | C17—C18 | 1.386 (3) |
N4—H4 | 0.8800 | C17—H17 | 0.9500 |
C5—C6 | 1.358 (3) | C18—C19 | 1.402 (3) |
C5—H5 | 0.9500 | C18—H18 | 0.9500 |
C6—H6 | 0.9500 | C19—C20 | 1.388 (3) |
N7—C11 | 1.321 (2) | C19—H19 | 0.9500 |
N7—C8 | 1.379 (2) | C20—C21 | 1.388 (2) |
C8—C9 | 1.365 (3) | C20—H20 | 0.9500 |
C8—H8 | 0.9500 | C21—O22 | 1.377 (2) |
C9—N10 | 1.371 (2) | O22—C23 | 1.371 (2) |
C9—H9 | 0.9500 | C23—C24 | 1.495 (2) |
N10—C11 | 1.339 (2) | C24—O25 | 1.243 (2) |
N10—H10 | 0.8800 | C24—O26 | 1.272 (2) |
C11—H11 | 0.9500 | | |
| | | |
N2i—Cu1—N2 | 180.00 (6) | N7—C11—H11 | 124.4 |
N2i—Cu1—N7 | 89.79 (6) | N10—C11—H11 | 124.4 |
N2—Cu1—N7 | 90.21 (6) | O12—C13—O14 | 122.31 (16) |
N2i—Cu1—N7i | 90.21 (6) | O12—C13—C15 | 118.91 (16) |
N2—Cu1—N7i | 89.79 (6) | O14—C13—C15 | 118.78 (15) |
N7—Cu1—N7i | 180.0 | C13—O14—H14 | 112.2 |
C3—N2—C6 | 105.90 (15) | C23—C15—C16 | 106.14 (14) |
C3—N2—Cu1 | 128.81 (13) | C23—C15—C13 | 129.32 (16) |
C6—N2—Cu1 | 125.00 (12) | C16—C15—C13 | 124.54 (15) |
N2—C3—N4 | 111.14 (16) | C21—C16—C17 | 118.86 (16) |
N2—C3—H3 | 124.4 | C21—C16—C15 | 105.25 (15) |
N4—C3—H3 | 124.4 | C17—C16—C15 | 135.88 (16) |
C3—N4—C5 | 107.61 (15) | C18—C17—C16 | 117.65 (17) |
C3—N4—H4 | 126.2 | C18—C17—H17 | 121.2 |
C5—N4—H4 | 126.2 | C16—C17—H17 | 121.2 |
C6—C5—N4 | 106.21 (16) | C17—C18—C19 | 121.99 (17) |
C6—C5—H5 | 126.9 | C17—C18—H18 | 119.0 |
N4—C5—H5 | 126.9 | C19—C18—H18 | 119.0 |
C5—C6—N2 | 109.13 (16) | C20—C19—C18 | 121.32 (17) |
C5—C6—H6 | 125.4 | C20—C19—H19 | 119.3 |
N2—C6—H6 | 125.4 | C18—C19—H19 | 119.3 |
C11—N7—C8 | 105.94 (15) | C21—C20—C19 | 115.76 (17) |
C11—N7—Cu1 | 123.34 (12) | C21—C20—H20 | 122.1 |
C8—N7—Cu1 | 129.56 (12) | C19—C20—H20 | 122.1 |
C9—C8—N7 | 109.11 (16) | O22—C21—C20 | 124.88 (16) |
C9—C8—H8 | 125.4 | O22—C21—C16 | 110.70 (14) |
N7—C8—H8 | 125.4 | C20—C21—C16 | 124.42 (16) |
C8—C9—N10 | 106.00 (17) | C23—O22—C21 | 106.19 (13) |
C8—C9—H9 | 127.0 | C15—C23—O22 | 111.71 (15) |
N10—C9—H9 | 127.0 | C15—C23—C24 | 133.42 (15) |
C11—N10—C9 | 107.73 (15) | O22—C23—C24 | 114.87 (14) |
C11—N10—H10 | 126.1 | O25—C24—O26 | 124.71 (16) |
C9—N10—H10 | 126.1 | O25—C24—C23 | 118.13 (15) |
N7—C11—N10 | 111.22 (16) | O26—C24—C23 | 117.16 (15) |
Symmetry code: (i) −x, −y, −z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O14—H14···O26 | 0.95 | 1.49 | 2.4380 (17) | 174 |
N4—H4···O25ii | 0.88 | 1.98 | 2.779 (2) | 150 |
N10—H10···O25iii | 0.88 | 1.99 | 2.799 (2) | 153 |
Symmetry codes: (ii) −x+1, −y+1, −z+1; (iii) x−1, y, z−1. |
(III) heptaaquabis(3-carboxy-1-benzofuran-2-carboxylato-
κO3)lanthanum(IV)
bis(hemihydrogen 3-carboxy-1-benzofuran-2-carboxylate) tetrahydrate
top
Crystal data top
[La(C10H5O5)2(H2O)7](C10H5.5O5)2·4H2O | Dx = 1.610 Mg m−3 |
Mr = 1156.64 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, Fdd2 | Cell parameters from 2586 reflections |
a = 38.9250 (16) Å | θ = 1.4–26.0° |
b = 8.6186 (3) Å | µ = 1.00 mm−1 |
c = 28.4430 (9) Å | T = 110 K |
V = 9542.0 (6) Å3 | Prism, colorless |
Z = 8 | 0.30 × 0.25 × 0.15 mm |
F(000) = 4688 | |
Data collection top
Nonius KappaCCD diffractometer | 4497 independent reflections |
Radiation source: fine-focus sealed tube | 3667 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.083 |
Detector resolution: 12.8 pixels mm-1 | θmax = 26.0°, θmin = 2.5° |
0.6° ϕ scans | h = −47→48 |
Absorption correction: multi-scan (Blessing, 1995) | k = −10→10 |
Tmin = 0.755, Tmax = 0.866 | l = −34→34 |
16083 measured reflections | |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.049 | H-atom parameters constrained |
wR(F2) = 0.114 | w = 1/[σ2(Fo2) + (0.0682P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.00 | (Δ/σ)max = 0.001 |
4497 reflections | Δρmax = 0.64 e Å−3 |
309 parameters | Δρmin = −0.79 e Å−3 |
1 restraint | Absolute structure: Flack (1983), 2093 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.49 (2) |
Crystal data top
[La(C10H5O5)2(H2O)7](C10H5.5O5)2·4H2O | V = 9542.0 (6) Å3 |
Mr = 1156.64 | Z = 8 |
Orthorhombic, Fdd2 | Mo Kα radiation |
a = 38.9250 (16) Å | µ = 1.00 mm−1 |
b = 8.6186 (3) Å | T = 110 K |
c = 28.4430 (9) Å | 0.30 × 0.25 × 0.15 mm |
Data collection top
Nonius KappaCCD diffractometer | 4497 independent reflections |
Absorption correction: multi-scan (Blessing, 1995) | 3667 reflections with I > 2σ(I) |
Tmin = 0.755, Tmax = 0.866 | Rint = 0.083 |
16083 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.049 | H-atom parameters constrained |
wR(F2) = 0.114 | Δρmax = 0.64 e Å−3 |
S = 1.00 | Δρmin = −0.79 e Å−3 |
4497 reflections | Absolute structure: Flack (1983), 2093 Friedel pairs |
309 parameters | Absolute structure parameter: 0.49 (2) |
1 restraint | |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and
goodness of fit S are based on F2, conventional R-factors R are based
on F, with F set to zero for negative F2. The threshold expression of
F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is
not relevant to the choice of reflections for refinement. R-factors based
on F2 are statistically about twice as large as those based on F, and R-
factors based on ALL data will be even larger. The structure represents a racemic twin. It contains solvent trapped
between the molecular entities, which could not be reliably identified
(though it is most probably disordered water).
Conventional refinement with the solvent excluded converged to R1=0.071,
the difference-Fourier electron density map four significant peaks
within 1.9-2.6 e/Å3
Its contribution was then subtracted from the diffraction data, using
the Squeeze procedure in the Platon software (Spek, 2003).
It showed that there are 8 voids per cell of 200 Å3 each. The residual
electron count was assessed to be 304 e/cell, which corresponds nicely
with 4 water molecules per void.
The H-atom (50% occupancy) bound to either O27 or O28 of the
non-coordinated ligand could not be located in difference-Fourier maps. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
La1 | 0.2500 | 0.2500 | 0.016942 (15) | 0.03005 (13) | |
O2 | 0.2500 | 0.2500 | −0.0736 (2) | 0.0434 (15) | |
H2 | 0.2657 | 0.2844 | −0.0943 | 0.065* | |
O3 | 0.29876 (10) | 0.0692 (5) | −0.01296 (15) | 0.0366 (10) | |
H3A | 0.3095 | 0.0723 | −0.0410 | 0.055* | |
H3B | 0.3141 | 0.0099 | 0.0025 | 0.055* | |
O4 | 0.20094 (10) | 0.0768 (5) | −0.01279 (15) | 0.0350 (10) | |
H4A | 0.1889 | 0.0525 | −0.0388 | 0.053* | |
H4B | 0.1832 | 0.0850 | 0.0073 | 0.053* | |
O5 | 0.25171 (10) | 0.5144 (4) | 0.05874 (15) | 0.0326 (10) | |
H5A | 0.2390 | 0.6009 | 0.0623 | 0.049* | |
H5B | 0.2724 | 0.5557 | 0.0651 | 0.049* | |
O6 | 0.29545 (10) | 0.2388 (4) | 0.07933 (14) | 0.0313 (9) | |
O7 | 0.34427 (11) | 0.3558 (5) | 0.06065 (15) | 0.0372 (10) | |
H7 | 0.3647 | 0.3896 | 0.0712 | 0.056* | |
C8 | 0.32578 (15) | 0.2674 (7) | 0.0873 (2) | 0.0314 (13) | |
C9 | 0.34196 (15) | 0.1973 (7) | 0.1295 (2) | 0.0288 (13) | |
C10 | 0.37537 (15) | 0.2118 (7) | 0.1450 (2) | 0.0330 (14) | |
C11 | 0.40573 (17) | 0.2986 (8) | 0.1282 (2) | 0.0369 (15) | |
O12 | 0.40245 (11) | 0.3845 (5) | 0.09123 (16) | 0.0407 (11) | |
O13 | 0.43360 (11) | 0.2853 (6) | 0.14948 (17) | 0.0459 (12) | |
O14 | 0.38116 (10) | 0.1265 (5) | 0.18467 (15) | 0.0355 (10) | |
C15 | 0.35020 (15) | 0.0536 (7) | 0.1949 (2) | 0.0299 (13) | |
C16 | 0.34549 (16) | −0.0461 (7) | 0.2324 (2) | 0.0350 (14) | |
H16 | 0.3633 | −0.0691 | 0.2542 | 0.042* | |
C17 | 0.31311 (16) | −0.1097 (7) | 0.2358 (2) | 0.0386 (15) | |
H17 | 0.3083 | −0.1803 | 0.2606 | 0.046* | |
C18 | 0.28690 (16) | −0.0726 (7) | 0.2035 (2) | 0.0363 (14) | |
H18 | 0.2649 | −0.1182 | 0.2071 | 0.044* | |
C19 | 0.29252 (15) | 0.0287 (7) | 0.1665 (2) | 0.0322 (14) | |
H19 | 0.2747 | 0.0533 | 0.1449 | 0.039* | |
C20 | 0.32499 (16) | 0.0931 (6) | 0.1620 (2) | 0.0295 (13) | |
O21 | 0.30012 (13) | −0.2323 (5) | 0.0713 (2) | 0.0512 (13) | |
O22 | 0.34463 (12) | −0.0825 (5) | 0.05468 (16) | 0.0424 (11) | |
H22 | 0.3651 | −0.0477 | 0.0651 | 0.064* | |
C23 | 0.3300 (2) | −0.1885 (8) | 0.0793 (3) | 0.0447 (17) | |
C24 | 0.3504 (2) | −0.2624 (7) | 0.1192 (2) | 0.0435 (16) | |
C25 | 0.38462 (19) | −0.2280 (7) | 0.1322 (2) | 0.0389 (16) | |
C26 | 0.41031 (19) | −0.1225 (8) | 0.1172 (3) | 0.0469 (18) | |
O27 | 0.40403 (13) | −0.0435 (6) | 0.08024 (17) | 0.0510 (13) | |
O28 | 0.43768 (12) | −0.1107 (6) | 0.14133 (19) | 0.0526 (12) | |
O29 | 0.39356 (12) | −0.3174 (6) | 0.17143 (17) | 0.0464 (11) | |
C30 | 0.36430 (17) | −0.4032 (7) | 0.1816 (3) | 0.0418 (16) | |
C31 | 0.3638 (2) | −0.5066 (8) | 0.2215 (3) | 0.0508 (18) | |
H31 | 0.3833 | −0.5233 | 0.2410 | 0.061* | |
C32 | 0.33165 (18) | −0.5818 (8) | 0.2291 (3) | 0.0433 (16) | |
H32 | 0.3288 | −0.6522 | 0.2545 | 0.052* | |
C33 | 0.30426 (18) | −0.5503 (7) | 0.1986 (2) | 0.0412 (16) | |
H33 | 0.2828 | −0.5996 | 0.2042 | 0.049* | |
C34 | 0.3071 (2) | −0.4491 (9) | 0.1601 (3) | 0.0530 (19) | |
H34 | 0.2881 | −0.4312 | 0.1397 | 0.064* | |
C35 | 0.33778 (19) | −0.3776 (8) | 0.1530 (3) | 0.0459 (18) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
La1 | 0.0226 (2) | 0.0371 (2) | 0.0305 (2) | 0.0015 (3) | 0.000 | 0.000 |
O2 | 0.036 (4) | 0.066 (4) | 0.028 (3) | 0.006 (3) | 0.000 | 0.000 |
O3 | 0.026 (2) | 0.043 (2) | 0.040 (3) | 0.013 (2) | 0.0039 (19) | 0.003 (2) |
O4 | 0.019 (2) | 0.050 (2) | 0.036 (2) | 0.0007 (19) | −0.0041 (17) | −0.0113 (19) |
O5 | 0.025 (2) | 0.035 (2) | 0.038 (2) | −0.0012 (18) | 0.0024 (17) | −0.0049 (16) |
O6 | 0.020 (2) | 0.040 (2) | 0.034 (2) | 0.0003 (18) | −0.0046 (17) | −0.0004 (18) |
O7 | 0.030 (2) | 0.044 (2) | 0.038 (2) | −0.003 (2) | −0.0028 (19) | 0.0104 (19) |
C8 | 0.024 (3) | 0.039 (3) | 0.032 (3) | 0.008 (3) | −0.007 (2) | −0.002 (3) |
C9 | 0.024 (3) | 0.038 (3) | 0.025 (3) | 0.002 (2) | 0.002 (2) | 0.002 (2) |
C10 | 0.026 (3) | 0.044 (4) | 0.029 (3) | 0.002 (2) | −0.006 (3) | −0.002 (2) |
C11 | 0.029 (3) | 0.046 (4) | 0.036 (4) | 0.002 (3) | −0.006 (3) | 0.004 (3) |
O12 | 0.034 (3) | 0.050 (3) | 0.038 (3) | −0.006 (2) | −0.0026 (19) | 0.008 (2) |
O13 | 0.026 (2) | 0.068 (3) | 0.044 (3) | −0.007 (2) | −0.006 (2) | 0.015 (2) |
O14 | 0.024 (2) | 0.041 (2) | 0.041 (3) | −0.0037 (18) | −0.0048 (18) | 0.0064 (19) |
C15 | 0.022 (3) | 0.032 (3) | 0.035 (4) | −0.001 (2) | −0.004 (3) | −0.007 (3) |
C16 | 0.029 (3) | 0.043 (3) | 0.033 (3) | −0.002 (3) | −0.007 (3) | 0.005 (3) |
C17 | 0.036 (4) | 0.033 (3) | 0.046 (4) | −0.004 (3) | 0.004 (3) | 0.000 (3) |
C18 | 0.030 (3) | 0.036 (3) | 0.043 (4) | −0.003 (3) | 0.000 (3) | 0.001 (3) |
C19 | 0.023 (3) | 0.036 (3) | 0.038 (3) | −0.002 (2) | −0.004 (3) | 0.001 (3) |
C20 | 0.031 (3) | 0.020 (3) | 0.037 (3) | −0.001 (3) | 0.001 (3) | −0.003 (2) |
O21 | 0.037 (3) | 0.042 (3) | 0.075 (4) | 0.004 (2) | 0.001 (2) | −0.005 (2) |
O22 | 0.041 (3) | 0.044 (3) | 0.042 (3) | 0.006 (2) | −0.002 (2) | −0.001 (2) |
C23 | 0.050 (5) | 0.032 (3) | 0.052 (4) | −0.001 (3) | 0.014 (4) | −0.010 (3) |
C24 | 0.054 (4) | 0.038 (3) | 0.038 (4) | 0.007 (3) | 0.010 (3) | −0.006 (3) |
C25 | 0.054 (4) | 0.035 (4) | 0.029 (3) | 0.018 (3) | −0.014 (3) | −0.006 (3) |
C26 | 0.042 (4) | 0.041 (4) | 0.058 (5) | 0.002 (3) | 0.003 (4) | −0.012 (4) |
O27 | 0.048 (3) | 0.067 (3) | 0.038 (3) | 0.004 (2) | −0.006 (2) | 0.002 (2) |
O28 | 0.044 (3) | 0.055 (3) | 0.058 (3) | 0.003 (2) | −0.006 (3) | −0.008 (2) |
O29 | 0.042 (3) | 0.052 (3) | 0.045 (3) | −0.002 (2) | −0.004 (2) | 0.007 (2) |
C30 | 0.033 (4) | 0.034 (4) | 0.059 (5) | −0.007 (3) | −0.003 (3) | −0.003 (3) |
C31 | 0.049 (4) | 0.051 (4) | 0.052 (4) | 0.004 (4) | −0.013 (4) | −0.018 (4) |
C32 | 0.045 (4) | 0.039 (4) | 0.046 (4) | −0.004 (3) | 0.004 (3) | −0.008 (3) |
C33 | 0.044 (4) | 0.039 (3) | 0.041 (4) | −0.001 (3) | 0.004 (3) | −0.003 (3) |
C34 | 0.053 (5) | 0.051 (4) | 0.054 (5) | 0.002 (4) | 0.002 (4) | −0.017 (3) |
C35 | 0.048 (4) | 0.045 (4) | 0.045 (4) | 0.002 (3) | 0.004 (3) | −0.013 (3) |
Geometric parameters (Å, º) top
La1—O6i | 2.508 (4) | C16—C17 | 1.378 (9) |
La1—O6 | 2.508 (4) | C16—H16 | 0.9500 |
La1—O4 | 2.567 (4) | C17—C18 | 1.411 (9) |
La1—O4i | 2.567 (4) | C17—H17 | 0.9500 |
La1—O5 | 2.571 (4) | C18—C19 | 1.384 (9) |
La1—O5i | 2.571 (4) | C18—H18 | 0.9500 |
La1—O2 | 2.574 (6) | C19—C20 | 1.386 (8) |
La1—O3 | 2.599 (4) | C19—H19 | 0.9500 |
La1—O3i | 2.599 (4) | O21—C23 | 1.243 (9) |
O2—H2 | 0.8997 | O22—C23 | 1.285 (8) |
O3—H3A | 0.9002 | O22—H22 | 0.9002 |
O3—H3B | 0.9000 | C23—C24 | 1.524 (11) |
O4—H4A | 0.8999 | C24—C25 | 1.415 (10) |
O4—H4B | 0.8999 | C24—C35 | 1.466 (10) |
O5—H5A | 0.9002 | C25—O29 | 1.401 (8) |
O5—H5B | 0.8999 | C25—C26 | 1.417 (10) |
O6—C8 | 1.227 (7) | C26—O28 | 1.272 (9) |
O7—C8 | 1.294 (7) | C26—O27 | 1.275 (9) |
O7—H7 | 0.9000 | O29—C30 | 1.388 (8) |
C8—C9 | 1.483 (8) | C30—C35 | 1.333 (10) |
C9—C10 | 1.379 (8) | C30—C31 | 1.444 (11) |
C9—C20 | 1.448 (8) | C31—C32 | 1.427 (10) |
C10—O14 | 1.366 (7) | C31—H31 | 0.9500 |
C10—C11 | 1.478 (9) | C32—C33 | 1.401 (10) |
C11—O13 | 1.247 (7) | C32—H32 | 0.9500 |
C11—O12 | 1.293 (8) | C33—C34 | 1.403 (11) |
O14—C15 | 1.389 (7) | C33—H33 | 0.9500 |
C15—C16 | 1.383 (9) | C34—C35 | 1.361 (10) |
C15—C20 | 1.398 (8) | C34—H34 | 0.9500 |
| | | |
O6i—La1—O6 | 89.91 (19) | C9—C10—C11 | 134.2 (6) |
O6i—La1—O4 | 74.37 (13) | O13—C11—O12 | 122.2 (6) |
O6—La1—O4 | 137.37 (13) | O13—C11—C10 | 119.5 (6) |
O6i—La1—O4i | 137.37 (13) | O12—C11—C10 | 118.2 (5) |
O6—La1—O4i | 74.37 (13) | C10—O14—C15 | 105.8 (4) |
O4—La1—O4i | 141.53 (19) | C16—C15—O14 | 123.9 (5) |
O6i—La1—O5 | 69.94 (12) | C16—C15—C20 | 125.1 (5) |
O6—La1—O5 | 71.85 (13) | O14—C15—C20 | 111.0 (5) |
O4—La1—O5 | 133.38 (12) | C15—C16—C17 | 115.0 (6) |
O4i—La1—O5 | 67.53 (13) | C15—C16—H16 | 122.5 |
O6i—La1—O5i | 71.85 (13) | C17—C16—H16 | 122.5 |
O6—La1—O5i | 69.94 (12) | C16—C17—C18 | 121.7 (6) |
O4—La1—O5i | 67.54 (13) | C16—C17—H17 | 119.2 |
O4i—La1—O5i | 133.38 (12) | C18—C17—H17 | 119.2 |
O5—La1—O5i | 124.91 (19) | C19—C18—C17 | 121.6 (6) |
O6i—La1—O2 | 135.05 (9) | C19—C18—H18 | 119.2 |
O6—La1—O2 | 135.04 (9) | C17—C18—H18 | 119.2 |
O4—La1—O2 | 70.76 (10) | C20—C19—C18 | 117.8 (6) |
O4i—La1—O2 | 70.77 (10) | C20—C19—H19 | 121.1 |
O5—La1—O2 | 117.54 (10) | C18—C19—H19 | 121.1 |
O5i—La1—O2 | 117.55 (10) | C19—C20—C15 | 118.7 (5) |
O6i—La1—O3 | 140.34 (13) | C19—C20—C9 | 136.3 (6) |
O6—La1—O3 | 72.14 (13) | C15—C20—C9 | 105.0 (5) |
O4—La1—O3 | 94.98 (13) | C23—O22—H22 | 116.7 |
O4i—La1—O3 | 72.39 (14) | O21—C23—O22 | 122.1 (7) |
O5—La1—O3 | 131.60 (13) | O21—C23—C24 | 119.8 (6) |
O5i—La1—O3 | 68.82 (13) | O22—C23—C24 | 118.1 (7) |
O2—La1—O3 | 70.90 (10) | C25—C24—C35 | 106.6 (6) |
O6i—La1—O3i | 72.14 (13) | C25—C24—C23 | 126.7 (6) |
O6—La1—O3i | 140.34 (13) | C35—C24—C23 | 126.6 (7) |
O4—La1—O3i | 72.39 (14) | C24—C25—O29 | 109.1 (6) |
O4i—La1—O3i | 94.99 (13) | C24—C25—C26 | 136.1 (6) |
O5—La1—O3i | 68.83 (13) | O29—C25—C26 | 114.7 (6) |
O5i—La1—O3i | 131.60 (13) | O28—C26—O27 | 124.2 (7) |
O2—La1—O3i | 70.90 (10) | O28—C26—C25 | 118.7 (7) |
O3—La1—O3i | 141.80 (19) | O27—C26—C25 | 117.1 (7) |
La1—O2—H2 | 130.9 | C30—O29—C25 | 104.8 (5) |
La1—O3—H3A | 127.7 | C35—C30—O29 | 114.9 (6) |
La1—O3—H3B | 131.6 | C35—C30—C31 | 124.9 (7) |
H3A—O3—H3B | 98.1 | O29—C30—C31 | 120.2 (6) |
La1—O4—H4A | 142.4 | C30—C31—C32 | 114.2 (6) |
La1—O4—H4B | 108.5 | C30—C31—H31 | 122.9 |
H4A—O4—H4B | 98.2 | C32—C31—H31 | 122.9 |
La1—O5—H5A | 140.5 | C33—C32—C31 | 119.1 (7) |
La1—O5—H5B | 117.9 | C33—C32—H32 | 120.4 |
H5A—O5—H5B | 98.1 | C31—C32—H32 | 120.4 |
C8—O6—La1 | 143.4 (4) | C32—C33—C34 | 123.0 (7) |
C8—O7—H7 | 119.1 | C32—C33—H33 | 118.5 |
O6—C8—O7 | 123.0 (5) | C34—C33—H33 | 118.5 |
O6—C8—C9 | 118.5 (6) | C35—C34—C33 | 117.8 (8) |
O7—C8—C9 | 118.5 (5) | C35—C34—H34 | 121.1 |
C10—C9—C20 | 106.4 (5) | C33—C34—H34 | 121.1 |
C10—C9—C8 | 128.5 (6) | C30—C35—C34 | 121.0 (7) |
C20—C9—C8 | 125.1 (5) | C30—C35—C24 | 104.7 (7) |
O14—C10—C9 | 111.8 (5) | C34—C35—C24 | 134.3 (8) |
O14—C10—C11 | 114.0 (5) | | |
Symmetry code: (i) −x+1/2, −y+1/2, z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···O28ii | 0.90 | 2.24 | 2.791 (5) | 119 |
O3—H3A···O28ii | 0.90 | 2.01 | 2.838 (7) | 152 |
O3—H3B···O22 | 0.90 | 2.06 | 2.932 (6) | 162 |
O4—H4A···O13iii | 0.90 | 1.92 | 2.760 (6) | 154 |
O4—H4B···O7i | 0.90 | 1.92 | 2.793 (6) | 162 |
O5—H5A···O21i | 0.90 | 1.91 | 2.779 (6) | 160 |
O5—H5B···O21iv | 0.90 | 2.13 | 2.906 (6) | 144 |
O7—H7···O12 | 0.90 | 1.57 | 2.438 (6) | 160 |
O22—H22···O27 | 0.90 | 1.58 | 2.447 (7) | 161 |
Symmetry codes: (i) −x+1/2, −y+1/2, z; (ii) −x+3/4, y+1/4, z−1/4; (iii) x−1/4, −y+1/4, z−1/4; (iv) x, y+1, z. |
Experimental details
| (I) | (II) | (III) |
Crystal data |
Chemical formula | C2H8N+·C10H5O5− | [Cu(C10H5O5)2(C3H4N2)4] | [La(C10H5O5)2(H2O)7](C10H5.5O5)2·4H2O |
Mr | 251.23 | 746.15 | 1156.64 |
Crystal system, space group | Triclinic, P1 | Triclinic, P1 | Orthorhombic, Fdd2 |
Temperature (K) | 110 | 110 | 110 |
a, b, c (Å) | 8.3381 (4), 8.6806 (3), 8.8521 (5) | 8.1383 (2), 9.9782 (3), 11.3225 (2) | 38.9250 (16), 8.6186 (3), 28.4430 (9) |
α, β, γ (°) | 68.4693 (17), 78.8197 (17), 81.035 (4) | 107.5049 (12), 108.4826 (14), 99.4472 (9) | 90, 90, 90 |
V (Å3) | 582.17 (5) | 796.68 (4) | 9542.0 (6) |
Z | 2 | 1 | 8 |
Radiation type | Mo Kα | Mo Kα | Mo Kα |
µ (mm−1) | 0.11 | 0.76 | 1.00 |
Crystal size (mm) | 0.40 × 0.20 × 0.20 | 0.45 × 0.30 × 0.25 | 0.30 × 0.25 × 0.15 |
|
Data collection |
Diffractometer | Nonius KappaCCD area-detector diffractometer | Nonius KappaCCD area-detector diffractometer | Nonius KappaCCD diffractometer |
Absorption correction | – | Multi-scan (Blessing, 1995) | Multi-scan (Blessing, 1995) |
Tmin, Tmax | – | 0.726, 0.833 | 0.755, 0.866 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7187, 2385, 1822 | 8773, 3753, 3386 | 16083, 4497, 3667 |
Rint | 0.047 | 0.023 | 0.083 |
(sin θ/λ)max (Å−1) | 0.628 | 0.658 | 0.617 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.116, 1.04 | 0.037, 0.097, 1.05 | 0.049, 0.114, 1.00 |
No. of reflections | 2385 | 3753 | 4497 |
No. of parameters | 174 | 232 | 309 |
No. of restraints | 0 | 0 | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H-atom parameters constrained | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.20, −0.24 | 0.39, −0.62 | 0.64, −0.79 |
Absolute structure | ? | ? | Flack (1983), 2093 Friedel pairs |
Absolute structure parameter | ? | ? | 0.49 (2) |
Hydrogen-bond geometry (Å, º) for (I) top
D—H···A | D—H | H···A | D···A | D—H···A |
O11—H11···O14 | 0.97 (2) | 1.51 (2) | 2.4817 (19) | 178 (2) |
N16—H16A···O15 | 0.87 (2) | 2.02 (2) | 2.7798 (19) | 145.2 (18) |
N16—H16A···O1 | 0.87 (2) | 2.45 (2) | 3.185 (2) | 142.9 (17) |
N16—H16B···O15i | 0.96 (2) | 1.80 (2) | 2.750 (2) | 171.0 (18) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Hydrogen-bond geometry (Å, º) for (II) top
D—H···A | D—H | H···A | D···A | D—H···A |
O14—H14···O26 | 0.95 | 1.49 | 2.4380 (17) | 174 |
N4—H4···O25i | 0.88 | 1.98 | 2.779 (2) | 150 |
N10—H10···O25ii | 0.88 | 1.99 | 2.799 (2) | 153 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x−1, y, z−1. |
Hydrogen-bond geometry (Å, º) for (III) top
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···O28i | 0.90 | 2.24 | 2.791 (5) | 119 |
O3—H3A···O28i | 0.90 | 2.01 | 2.838 (7) | 152 |
O3—H3B···O22 | 0.90 | 2.06 | 2.932 (6) | 162 |
O4—H4A···O13ii | 0.90 | 1.92 | 2.760 (6) | 154 |
O4—H4B···O7iii | 0.90 | 1.92 | 2.793 (6) | 162 |
O5—H5A···O21iii | 0.90 | 1.91 | 2.779 (6) | 160 |
O5—H5B···O21iv | 0.90 | 2.13 | 2.906 (6) | 144 |
O7—H7···O12 | 0.90 | 1.57 | 2.438 (6) | 160 |
O22—H22···O27 | 0.90 | 1.58 | 2.447 (7) | 161 |
Symmetry codes: (i) −x+3/4, y+1/4, z−1/4; (ii) x−1/4, −y+1/4, z−1/4; (iii) −x+1/2, −y+1/2, z; (iv) x, y+1, z. |
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Organic polycarboxylic acids can be considered as attractive building blocks for the construction of supramolecular architectures, because of their ability to link to metal centres in a variety of coordination modes simultaneously and generate extended networks. Moreover, such ligands can be readily deprotonated to balance the charge of the metal ions they interact with (and thus enjoy electrostatic attraction to the metal centres), without the need to incorporate foreign ions into the product. Several examples of materials with bifunctional anions, such as 1,4-benzenedicarboxylate (Guilera & Steed, 1999), trifunctional, such as 1,3,5-benzenetricarboxylate (Liu et al., 2007) or 1,3,5-cyclohexanetricarboxylate (Fang et al., 2006), tetrafunctional, such as 1,2,4,5-benzenetetracarboxylate (Ghosh & Bharadwaj, 2004) or 1,4,5,8-naphthalenetetracarboxylate (Koner & Goldberg, 2008), and hexafunctional, such as benzenehexacarboxylate (Yang et al., 2004), have been studied extensively in recent years. The tetra(carboxyphenyl)porphyrin ligand provides a particularly fascinating example of a tetracarboxylic acid prone to forming rigid open-framework solids via coordination polymerization through metal ions (Goldberg, 2005). In the above context, we focus in this study on the benzofuran-2,3-dicarboxylic building block (BFDC), aiming to explore for the first time (structures of neither the carboxylic acid form nor the carboxylate form of this compound have been reported previously) its structural features and possible synthons of supramolecular interaction with other components.
All three compounds (I)–(III) were obtained in mildly basic reaction environments used to promote the formation of metal–carboxylate coordination bonds. Although we failed to formulate coordination polymers at this stage, the present characterization of the crystalline products provided useful information. Thus, when the title dicarboxylic acid was reacted with a lanthanum nitrate salt (see below) in the presence of N,N'-dimethylformamide (DMF) in hydrothermal conditions, no metal ions were incorporated into the structure. Instead, the 1:1 salt, (I), formed between the mono-deprotonated benzofuran component (BFDC-) and a dimethylammonium cation (a product resulting from hydrolysis of DMF). The observed molecular structure of BFDC- in (I) throws light on the preferred form of this species in the other crystal structures as well, and deserves particular attention. Fig. 1 reveals that the spatial proximity of the two ortho-substituted carboxylic acid functions is favourable to the formation of an intramolecular O11—H11···O14 hydrogen bond (Table 1). Moreover, deprotonation occurs favourably on the carboxylic acid group (C13/O14/O15) which is closer to the electron-withdrawing etheral site. These features explain the preferred behaviour of this ligand. Although it bears two carboxylic acid functions, it tends to act as a monoprotic acid, the H atoms of the second acid group being engaged in an effective intramolecular hydrogen bond. In addition, hydrogen bonding also occurs between the ammonium cation and BFDC- (Table 1).
The crystal structure of (I) is shown in Fig. 2(a). It reveals that centrosymmetric hydrogen-bonded dimers are formed with an R24(8) ring motif (Bernstein et al., 1995) involving two cations and two anions. The rigid benzofuran group O1/C2–C8/C12 is essentially planar with delocalized π-electron density. Not surprisingly, therefore, its intermolecular organization in the crystal structure involves π–π interactions between partly overlapping anions located at (x, y, z) and (-x, 2 - y, 1 - z) (Fig. 2b). The mean interplanar distance between the inversion-related O1/C2–C8/C12 fragments of these two species is 3.388 (7) Å, while the distance between the centres of the corresponding C2—C7 bonds is 3.492 (3) Å. Only minimal overlap occurs, however, between subsequent (along the a axis) parallel aromatic species related by inversion at (1/2, 1, 1/2).
Reaction of the dicarboxylic acid ligand with CuII ions, in the presence of imidazole, yielded compound (II), which represents an octahedral complex (Fig. 3) with four imidazole ligands occupying the equatorial positions and two BFDC- anions coordinating to the axial positions. It resides on centres of inversion. The reaction of BFDC with the CuII ions has not affected the features observed in (I), namely the presence of an intramolecular hydrogen bond associated with monodeprotonation only. Correspondingly, the two BFDC- ligating species balance the 2+ charge of the central metal ion. As commonly observed in the literature, the octahedral geometry of (II) is axially distorted due to the Jahn–Teller effect. The equatorial Cu1—N2 and Cu1—N7 bond lengths are 2.009 (2) and 2.015 (2) Å, while the axial Cu1—O12 bond lengths are 2.451 (2) Å. The stacking interactions between the aromatic benzofuran fragments are also evident in the crystal structure of (II) (Fig. 4). Adjacent inversion-related [at (1/2, 0, 1/2)] benzofuran fragments C15—C21/O22/C23 overlap one another at a mean interplanar distance of 3.424 (13) Å. Neighbouring units of the octahedral complex are also linked via hydrogen bonds between the NH sites of the imidazoles of one unit and the carboxylic acid fragment of adjacent anions (Table 2). The N—H···O bonds develop sheets of hydrogen-bonded molecules in the (101) plane (Fig. 4).
These molecular characteristics of BFDC/BFDC- are also preserved in the reaction of BFDC with trivalent metal ions such as La3+. The molecular structure of the resulting [La(H2O)7(BFDC-)2].(BFDC-) adduct, (III), is shown in Fig. 5. In spite of the high coordination number of this metal (9), only two monoanionic ligand species coordinate to it, possibly due to steric constraints. The coordination environment is completed by seven molecules of water. Units of the complex are positioned on twofold rotation axes (1/2 - x, 1/2 - y, z). The coordination distances are La1—O6(BFDC-) = 2.511 (6) Å and La1—O(water) = 2.562 (2)–2.602 (6) Å. In order to balance the charge of the trivalent cation, an additional non-coordinated BFDC- anion is incorporated into the structure between the aromatic fragments of adjacent entities of the lanthanum complex aligned along the b axis. Fig. 6 nicely illustrates the parallel alignment of the anionic ligands along the b axis of the crystal structure. Partial but significant overlap occurs between the C9/C10/O14/C15–C25 and C24/C25/O29/C30–C35 benzofuran fragments of the asymmetric unit, with a mean interplanar distance between them of 3.387 (9) Å. Minimal parallel overlap exists between the C24/C25/O29/C30–C35 framework at (x, y, z) and the adjacent C9/C10/O14/C15–C25 residue at (x, y - 1, z), the corresponding mean perpendicular distance between these planes being 3.124 (17) Å. Two molecules of disordered non-coordinated water per [La(H2O)7(BFDC-)2].(BFDC-) unit are included in the interstitial voids in (III). The water ligands coordinated to La are involved in numerous hydrogen-bonding interactions with neighbouring entities, yielding an extended supramolecular pattern of three-dimensional connectivity (Table 3).
In summary, this study characterizes the molecular structure of the benzofuran dicarboxylic acid ligand, ellucidating its high propensity to react as a mono-anion, while maintaining an intramolecular hydrogen bond between the two carboxylic acid substituents. Consistent occurrence of the latter makes second deprotonation of BFDC- less probable. The aromatic nature of BFDC- is widely reflected in the intermolecular π–π stacking interactions observed in the three crystal structures presented here, with a nearly constant spacing of 3.37–3.42 Å between the overlapping benzofurans. Application of the BFDC ligand, as a bidentate or polydentate bridging ligand, in the synthesis of extended coordination polymers may require more extreme experimental conditions.