Buy article online - an online subscription or single-article purchase is required to access this article.
Download citation
Download citation
link to html
The structure of the title compound, [PtCl2(C5H5N)(C2H6S)], consists of discrete mol­ecules in which the Pt-atom coordination is slightly distorted square planar. The Cl atoms are trans to each other, with a Cl—Pt—Cl angle of 176.60 (7)°. The pyridine ligand is rotated 64.5 (2)° from the Pt square plane and one of the Pt—Cl bonds essentially bisects the C—S—C angle of the di­methyl sulfide ligand. In the crystal structure, there are extensive weak C—H...Cl interactions, the shortest of which connects mol­ecules into centrosymmetric dimers. A comparison of the structural trans influence on Pt—S and Pt—­N distances for PtS(CH3)2 and Pt(pyridine) fragments, respectively, in square-planar PtII complexes is presented.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270103026465/fg1718sup1.cif
Contains datablocks default, I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108270103026465/fg1718Isup2.hkl
Contains datablock I

CCDC reference: 231031

Comment top

The trans influence, i.e. the change in ground-state thermodynamic properties due to trans-ligand effects, has been widely studied, particularly for square-planar PtII complexes (Pidcock et al., 1966; Crabtree, 1988, Anderson & Orpen, 2001). Zumdahl & Drago (1968) have shown that the trans influence is due to the σ-donation ability of the trans ligand; stronger σ donors show a stronger trans influence, as noted by a weaker overlap of the ligand trans to the Pt atom. Some cis influence is also predicted. X-ray crystallographic studies have clearly shown the trans influence in Pt—Cl bond distances (Appleton et al., 1973; Kapoor et al., 1996, 1998; Norén et al., 1997; Otto & Johansson, 2002). In the title compound, trans-[PtCl2(NC5H5)S(CH3)2], (I), the dimethyl sulfide ligand is trans to a pyridine ligand. Compound (I) is the first structurally characterized trans-[PtLSMe2Cl2] complex to be published. \sch

In (I), the Pt atom is in a slightly distorted squar-planar environment, with the coordination sphere consisting of trans Cl atoms, a dimethyl sulfide ligand and a pyridine ligand (Fig. 1). Selected geometric parameters for (I) are given in Table 1. The geometry about the Pt atom deviates little from an ideal square plane; the S—Pt—Cl1 angle [92.65 (8)°] is slightly larger than 90° in order to accommodate the methyl groups of the dimethyl sulfide ligand. The Pt atom is almost exactly coplanar with the plane defined by the four atoms bonded to it, with a deviation from the plane of 0.0029 (19) Å. The pyridine ring is tilted at an angle of 64.5 (2)° to the square plane. The angle between the PtCl2NS and SC2 planes is 87.0 (2)°.

In the crystal of (I), there are extensive weak C—H···Cl interactions (Table 2), the shortest of which connects molecules into centrosymmetric dimers (Fig. 2).

The dimethyl sulfide ligand is bonded via the S atom, which shows trigonal-pyramidal geometry. The S—C distances and C—S—C angles are close to the averages found for squar-planar PtII complexes in the Cambridge Structural Database (CSD, Version 5.24; Allen, 2002): the minimum and maximum C—S distances are 1.78 (2) and 1.796 (14) Å, respectively, and the mean OK? C—S—C angle is 99.3 (8)° for 21 observations. The Pt—Cl distance in (I) is comparable with those in tran-PtCl2 moieties, which have an average of 2.300 (11) Å for 397 examples in the CSD, and the Pt—N distance is about the same as the average [2.05 (4) Å, 44 observations].

A total of seven complexes with the general formula [PtSMe2L3], and 15 complexes of the general formula [Pt(pyridine)L3], where L is a simple monodentate ligand, have been structurally characterized and reported in the CSD. Table 3 lists the average Pt—S distances versus the trans-ligand for the first type. The structural trans-influence series from these observations is phenyl >> pyridine > SMe2 > Cl.

Table 4 lists the average Pt—N distances versus the trans-ligand for the second type of complex, [Pt(pyridine)L3]. The Pt—N distances in trans-[Pt(pyridine)2Cl2], (CLPYPT; Colamarino & Oriolli, 1975) are unusually short [1.98 (1) Å] compared with the average calculated for trans pyridine ligands. As the authors state that the refinement showed problems, this value has been omitted. The structural trans-influence series follows the order: phenyl > AsPh3 > –CH2NC5H5 > –SCN > pyridine > Cl > –ONO2.

Experimental top

Compound (I) was crystallized from a solution of dichlorobis(dimethyl sulfide)platinum in dichloromethane with a small quantity of pyridine.

Refinement top

The H atoms of the dimethyl sulfide ligand were refined as riding atoms, with an ideal tetrahedral geometry allowed to rotate to fit the electron density; C—H = 0.98 Å and Uiso(H) = 1.5Ueq(C). The H atoms on the pyridine ring were constrained to positions bisecting the C—C—C angles; C—H = 0.95 Å and Uiso(H) = 1.2Ueq(C). The largest residual peak in the difference Fourier map is 2.04 Å from atom H4 and the largest hole is 0.94 Å from the Pt atom.

Computing details top

Data collection: KappaCCD Server Software (Nonius, 1997); cell refinement: DENZO-SMN (Otwinowski & Minor, 1997); data reduction: DENZO-SMN; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97.

Figures top
[Figure 1] Fig. 1. A view of the molecule of (I) with the atomic labelling scheme. Displacement ellipsoids are drawn at the 50% probability level and H atoms are shown as small spheres of arbitrary radii.
[Figure 2] Fig. 2. A diagram showing the molecules of (I) connected into centrosymmetric dimers by weak C—H···Cl interactions (shown as dashed lines). The atom Cl1a is related by the symmetry operator (-x, 1 − y, −z).
trans-Dichloro(dimethyl sulfide-κS)(pyridine-κN)platinum(II) top
Crystal data top
[PtCl2(C5H5N)(C2H6S)]F(000) = 752
Mr = 407.22Dx = 2.504 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 36336 reflections
a = 8.5159 (17) Åθ = 4.1–27.5°
b = 5.9128 (12) ŵ = 13.62 mm1
c = 21.586 (4) ÅT = 100 K
β = 96.32 (3)°Block, orange
V = 1080.3 (4) Å30.22 × 0.22 × 0.19 mm
Z = 4
Data collection top
Nonius KappaCCD area-detector
diffractometer
2459 independent reflections
Radiation source: fine-focus sealed tube1756 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.096
ϕ scans and ω scans with κ offsetsθmax = 27.5°, θmin = 4.2°
Absorption correction: multi-scan
DENZO-SMN (Otwinowski & Minor, 1997)
h = 1111
Tmin = 0.060, Tmax = 0.075k = 77
11912 measured reflectionsl = 2727
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.082H-atom parameters constrained
S = 0.97 w = 1/[σ2(Fo2) + (0.0353P)2]
where P = (Fo2 + 2Fc2)/3
2459 reflections(Δ/σ)max = 0.001
111 parametersΔρmax = 2.14 e Å3
0 restraintsΔρmin = 1.94 e Å3
Crystal data top
[PtCl2(C5H5N)(C2H6S)]V = 1080.3 (4) Å3
Mr = 407.22Z = 4
Monoclinic, P21/cMo Kα radiation
a = 8.5159 (17) ŵ = 13.62 mm1
b = 5.9128 (12) ÅT = 100 K
c = 21.586 (4) Å0.22 × 0.22 × 0.19 mm
β = 96.32 (3)°
Data collection top
Nonius KappaCCD area-detector
diffractometer
2459 independent reflections
Absorption correction: multi-scan
DENZO-SMN (Otwinowski & Minor, 1997)
1756 reflections with I > 2σ(I)
Tmin = 0.060, Tmax = 0.075Rint = 0.096
11912 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0380 restraints
wR(F2) = 0.082H-atom parameters constrained
S = 0.97Δρmax = 2.14 e Å3
2459 reflectionsΔρmin = 1.94 e Å3
111 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Pt0.30654 (3)0.93969 (5)0.137114 (13)0.02717 (12)
Cl10.0402 (2)0.9030 (4)0.14632 (9)0.0354 (5)
Cl20.5687 (2)0.9856 (4)0.12215 (9)0.0323 (5)
S0.3490 (2)1.1506 (4)0.22550 (9)0.0310 (5)
N0.2765 (7)0.7342 (11)0.0607 (3)0.0290 (15)
C10.3484 (10)0.5317 (16)0.0614 (4)0.035 (2)
H10.41930.49240.09690.042*
C20.3243 (9)0.3783 (14)0.0132 (4)0.033 (2)
H20.37700.23650.01580.040*
C30.2223 (9)0.4336 (15)0.0389 (4)0.0350 (19)
H30.20110.32980.07240.042*
C40.1509 (9)0.6477 (16)0.0409 (4)0.036 (2)
H40.08320.69300.07660.043*
C50.1793 (9)0.7918 (15)0.0091 (4)0.0336 (19)
H50.12940.93570.00750.040*
C60.2692 (10)0.9923 (14)0.2856 (4)0.033 (2)
H6A0.27731.08180.32410.050*
H6B0.32870.85120.29310.050*
H6C0.15800.95730.27260.050*
C70.2098 (11)1.3837 (14)0.2192 (4)0.039 (2)
H7A0.21431.46240.25930.059*
H7B0.10281.32530.20780.059*
H7C0.23711.48930.18710.059*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Pt0.02837 (17)0.02433 (18)0.02783 (17)0.00028 (15)0.00126 (11)0.00113 (15)
Cl10.0290 (10)0.0400 (14)0.0361 (10)0.0019 (9)0.0013 (8)0.0016 (9)
Cl20.0296 (10)0.0349 (12)0.0316 (10)0.0001 (8)0.0006 (8)0.0040 (8)
S0.0325 (11)0.0275 (11)0.0323 (10)0.0000 (9)0.0009 (9)0.0050 (9)
N0.025 (3)0.027 (4)0.035 (4)0.005 (3)0.001 (3)0.003 (3)
C10.032 (4)0.042 (6)0.032 (4)0.005 (4)0.005 (4)0.002 (4)
C20.026 (4)0.032 (5)0.042 (5)0.000 (3)0.004 (4)0.002 (4)
C30.040 (5)0.036 (5)0.029 (4)0.006 (4)0.004 (4)0.002 (4)
C40.034 (5)0.038 (5)0.032 (4)0.001 (4)0.007 (4)0.000 (4)
C50.034 (5)0.025 (5)0.041 (5)0.000 (4)0.003 (4)0.001 (4)
C60.043 (5)0.028 (5)0.028 (4)0.002 (4)0.001 (4)0.000 (3)
C70.055 (6)0.032 (5)0.031 (4)0.009 (4)0.007 (4)0.000 (4)
Geometric parameters (Å, º) top
Pt—N2.042 (6)C3—C41.402 (12)
Pt—S2.275 (2)C3—H30.95
Pt—Cl12.309 (2)C4—C51.376 (11)
Pt—Cl22.307 (2)C4—H40.95
S—C61.794 (8)C5—H50.95
S—C71.813 (8)C6—H6A0.98
N—C11.344 (11)C6—H6B0.98
N—C51.355 (9)C6—H6C0.98
C1—C21.379 (12)C7—H7A0.98
C1—H10.95C7—H7B0.98
C2—C31.383 (10)C7—H7C0.98
C2—H20.95
N—Pt—S176.36 (18)C4—C3—H3121.0
N—Pt—Cl188.66 (18)C5—C4—C3119.8 (7)
S—Pt—Cl192.65 (8)C5—C4—H4120.1
N—Pt—Cl289.66 (18)C3—C4—H4120.1
S—Pt—Cl289.20 (7)N—C5—C4121.8 (8)
Cl2—Pt—Cl1176.60 (7)N—C5—H5119.1
C6—S—C798.9 (4)C4—C5—H5119.1
C6—S—Pt106.4 (3)S—C6—H6A109.5
C7—S—Pt108.2 (3)S—C6—H6B109.5
C1—N—C5118.0 (7)H6A—C6—H6B109.5
C1—N—Pt120.3 (5)S—C6—H6C109.5
C5—N—Pt121.6 (6)H6A—C6—H6C109.5
N—C1—C2123.2 (7)H6B—C6—H6C109.5
N—C1—H1118.4S—C7—H7A109.5
C2—C1—H1118.4S—C7—H7B109.5
C1—C2—C3119.1 (8)H7A—C7—H7B109.5
C1—C2—H2120.4S—C7—H7C109.5
C3—C2—H2120.4H7A—C7—H7C109.5
C2—C3—C4118.0 (8)H7B—C7—H7C109.5
C2—C3—H3121.0
Cl1—Pt—S—C652.9 (3)C5—N—C1—C22.0 (12)
Cl2—Pt—S—C6130.0 (3)Pt—N—C1—C2175.2 (6)
Cl1—Pt—S—C752.6 (3)N—C1—C2—C30.4 (13)
Cl2—Pt—S—C7124.6 (3)C1—C2—C3—C41.7 (12)
Cl1—Pt—N—C1115.9 (6)C2—C3—C4—C52.2 (12)
Cl2—Pt—N—C167.0 (6)C1—N—C5—C41.4 (12)
Cl1—Pt—N—C561.2 (6)Pt—N—C5—C4175.8 (6)
Cl2—Pt—N—C5115.9 (6)C3—C4—C5—N0.7 (13)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C7—H7B···Cl10.982.853.484 (9)123
C4—H4···Cl1i0.952.953.752 (9)142
C3—H3···Cl1ii0.952.823.632 (8)144
C6—H6B···Cl2iii0.982.903.773 (8)148
C6—H6A···Cl2iv0.982.903.711 (8)140
C7—H7A···Cl2iv0.982.993.772 (9)138
C3—H3···Cl2v0.952.993.640 (9)127
Symmetry codes: (i) x, y+2, z; (ii) x, y+1, z; (iii) x+1, y1/2, z+1/2; (iv) x+1, y+1/2, z+1/2; (v) x+1, y+1, z.

Experimental details

Crystal data
Chemical formula[PtCl2(C5H5N)(C2H6S)]
Mr407.22
Crystal system, space groupMonoclinic, P21/c
Temperature (K)100
a, b, c (Å)8.5159 (17), 5.9128 (12), 21.586 (4)
β (°) 96.32 (3)
V3)1080.3 (4)
Z4
Radiation typeMo Kα
µ (mm1)13.62
Crystal size (mm)0.22 × 0.22 × 0.19
Data collection
DiffractometerNonius KappaCCD area-detector
diffractometer
Absorption correctionMulti-scan
DENZO-SMN (Otwinowski & Minor, 1997)
Tmin, Tmax0.060, 0.075
No. of measured, independent and
observed [I > 2σ(I)] reflections
11912, 2459, 1756
Rint0.096
(sin θ/λ)max1)0.650
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.038, 0.082, 0.97
No. of reflections2459
No. of parameters111
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å3)2.14, 1.94

Computer programs: KappaCCD Server Software (Nonius, 1997), DENZO-SMN (Otwinowski & Minor, 1997), DENZO-SMN, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003), SHELXL97.

Selected geometric parameters (Å, º) top
Pt—N2.042 (6)Pt—Cl22.307 (2)
Pt—S2.275 (2)S—C61.794 (8)
Pt—Cl12.309 (2)S—C71.813 (8)
N—Pt—S176.36 (18)C6—S—C798.9 (4)
Cl2—Pt—Cl1176.60 (7)
Cl1—Pt—S—C652.9 (3)Cl2—Pt—N—C167.0 (6)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C7—H7B···Cl10.982.853.484 (9)123
C4—H4···Cl1i0.952.953.752 (9)142
C3—H3···Cl1ii0.952.823.632 (8)144
C6—H6B···Cl2iii0.982.903.773 (8)148
C6—H6A···Cl2iv0.982.903.711 (8)140
C7—H7A···Cl2iv0.982.993.772 (9)138
C3—H3···Cl2v0.952.993.640 (9)127
Symmetry codes: (i) x, y+2, z; (ii) x, y+1, z; (iii) x+1, y1/2, z+1/2; (iv) x+1, y+1/2, z+1/2; (v) x+1, y+1, z.
The trans-ligand effect on the Pt-S distance (Å) for [Pt(SMe2)L3] complexes top
LtransAverage Pt-SRef. codes
Cl2.268 (4)JASMULa, MINNECb, VAYWOHc, WENJIId
SMe22.292 (3)RIXSAXe, TIVLOZf
Phenyl2.380 (10)FAZVORg
References: (a) Huffman & Lloyd (1989); (b) Otto & Johansson (2002); (c) Horn et al. (1990); (d) Kapoor et al. (1998); (e) Wendt et al., 1997; (f) Kapoor et al. (1996); (g) Alibrandi et al. (1987).
The trans-ligand effect on the Pt-N distance (Å) for [Pt(pyridine)L3] complexes top
LtransAverage Pt-NRef. codes
-ONO22.01 (2)ICUVEHa
Cl2.026 (12)CCPYPTb, KIHYOPc, IGOROLd
pyridine2.027 (6)CIWKEY01e, ICUVADa, MIJWEHf, SESDOJg TCPYPTh
I2.044 (6)KARTIGi
S(0)(p-tol)(Me)2.048 (9)*IGORURd
-CH2NC5H52.101 (10)*FEZWEMj
AsPh32.109 (5)*XOTRIHk
Phenyl2.140 (4)*HEWNUSl
Notes: (a) Tessier & Rochon (2001); (b) Colamarino & Orioli (1975); (c) Belsky et al. (1991); (d) Skvortsov et al. (2002); (e) Wei et al. (1989); (f) Fontes et al. (2001); (g) Pombrik et al. (1988); (h) Caira & Nassimbeni (1975); (i) Tessier & Rochon (1999); (j) Hanks et al. (1987); (k) Kuznik & Wendt (2002); (l) Romeo et al. (1994). (*) Estimated s.u. for the bond length.
 

Subscribe to Acta Crystallographica Section C: Structural Chemistry

The full text of this article is available to subscribers to the journal.

If you have already registered and are using a computer listed in your registration details, please email support@iucr.org for assistance.

Buy online

You may purchase this article in PDF and/or HTML formats. For purchasers in the European Community who do not have a VAT number, VAT will be added at the local rate. Payments to the IUCr are handled by WorldPay, who will accept payment by credit card in several currencies. To purchase the article, please complete the form below (fields marked * are required), and then click on `Continue'.
E-mail address* 
Repeat e-mail address* 
(for error checking) 

Format*   PDF (US $40)
   HTML (US $40)
   PDF+HTML (US $50)
In order for VAT to be shown for your country javascript needs to be enabled.

VAT number 
(non-UK EC countries only) 
Country* 
 

Terms and conditions of use
Contact us

Follow Acta Cryst. C
Sign up for e-alerts
Follow Acta Cryst. on Twitter
Follow us on facebook
Sign up for RSS feeds