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The structure of the title compound, [PtCl
2(C
5H
5N)(C
2H
6S)], consists of discrete molecules in which the Pt-atom coordination is slightly distorted square planar. The Cl atoms are
trans to each other, with a Cl—Pt—Cl angle of 176.60 (7)°. The pyridine ligand is rotated 64.5 (2)° from the Pt square plane and one of the Pt—Cl bonds essentially bisects the C—S—C angle of the dimethyl sulfide ligand. In the crystal structure, there are extensive weak C—H
Cl interactions, the shortest of which connects molecules into centrosymmetric dimers. A comparison of the structural
trans influence on Pt—S and Pt—N distances for PtS(CH
3)
2 and Pt(pyridine) fragments, respectively, in square-planar Pt
II complexes is presented.
Supporting information
CCDC reference: 231031
Compound (I) was crystallized from a solution of dichlorobis(dimethyl sulfide)platinum in dichloromethane with a small quantity of pyridine.
The H atoms of the dimethyl sulfide ligand were refined as riding atoms, with an ideal tetrahedral geometry allowed to rotate to fit the electron density; C—H = 0.98 Å and Uiso(H) = 1.5Ueq(C). The H atoms on the pyridine ring were constrained to positions bisecting the C—C—C angles; C—H = 0.95 Å and Uiso(H) = 1.2Ueq(C). The largest residual peak in the difference Fourier map is 2.04 Å from atom H4 and the largest hole is 0.94 Å from the Pt atom.
Data collection: KappaCCD Server Software (Nonius, 1997); cell refinement: DENZO-SMN (Otwinowski & Minor, 1997); data reduction: DENZO-SMN; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97.
trans-Dichloro(dimethyl sulfide-
κS)(pyridine-
κN)platinum(II)
top
Crystal data top
[PtCl2(C5H5N)(C2H6S)] | F(000) = 752 |
Mr = 407.22 | Dx = 2.504 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 36336 reflections |
a = 8.5159 (17) Å | θ = 4.1–27.5° |
b = 5.9128 (12) Å | µ = 13.62 mm−1 |
c = 21.586 (4) Å | T = 100 K |
β = 96.32 (3)° | Block, orange |
V = 1080.3 (4) Å3 | 0.22 × 0.22 × 0.19 mm |
Z = 4 | |
Data collection top
Nonius KappaCCD area-detector diffractometer | 2459 independent reflections |
Radiation source: fine-focus sealed tube | 1756 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.096 |
ϕ scans and ω scans with κ offsets | θmax = 27.5°, θmin = 4.2° |
Absorption correction: multi-scan DENZO-SMN (Otwinowski & Minor, 1997) | h = −11→11 |
Tmin = 0.060, Tmax = 0.075 | k = −7→7 |
11912 measured reflections | l = −27→27 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.082 | H-atom parameters constrained |
S = 0.97 | w = 1/[σ2(Fo2) + (0.0353P)2] where P = (Fo2 + 2Fc2)/3 |
2459 reflections | (Δ/σ)max = 0.001 |
111 parameters | Δρmax = 2.14 e Å−3 |
0 restraints | Δρmin = −1.94 e Å−3 |
Crystal data top
[PtCl2(C5H5N)(C2H6S)] | V = 1080.3 (4) Å3 |
Mr = 407.22 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 8.5159 (17) Å | µ = 13.62 mm−1 |
b = 5.9128 (12) Å | T = 100 K |
c = 21.586 (4) Å | 0.22 × 0.22 × 0.19 mm |
β = 96.32 (3)° | |
Data collection top
Nonius KappaCCD area-detector diffractometer | 2459 independent reflections |
Absorption correction: multi-scan DENZO-SMN (Otwinowski & Minor, 1997) | 1756 reflections with I > 2σ(I) |
Tmin = 0.060, Tmax = 0.075 | Rint = 0.096 |
11912 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.082 | H-atom parameters constrained |
S = 0.97 | Δρmax = 2.14 e Å−3 |
2459 reflections | Δρmin = −1.94 e Å−3 |
111 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Pt | 0.30654 (3) | 0.93969 (5) | 0.137114 (13) | 0.02717 (12) | |
Cl1 | 0.0402 (2) | 0.9030 (4) | 0.14632 (9) | 0.0354 (5) | |
Cl2 | 0.5687 (2) | 0.9856 (4) | 0.12215 (9) | 0.0323 (5) | |
S | 0.3490 (2) | 1.1506 (4) | 0.22550 (9) | 0.0310 (5) | |
N | 0.2765 (7) | 0.7342 (11) | 0.0607 (3) | 0.0290 (15) | |
C1 | 0.3484 (10) | 0.5317 (16) | 0.0614 (4) | 0.035 (2) | |
H1 | 0.4193 | 0.4924 | 0.0969 | 0.042* | |
C2 | 0.3243 (9) | 0.3783 (14) | 0.0132 (4) | 0.033 (2) | |
H2 | 0.3770 | 0.2365 | 0.0158 | 0.040* | |
C3 | 0.2223 (9) | 0.4336 (15) | −0.0389 (4) | 0.0350 (19) | |
H3 | 0.2011 | 0.3298 | −0.0724 | 0.042* | |
C4 | 0.1509 (9) | 0.6477 (16) | −0.0409 (4) | 0.036 (2) | |
H4 | 0.0832 | 0.6930 | −0.0766 | 0.043* | |
C5 | 0.1793 (9) | 0.7918 (15) | 0.0091 (4) | 0.0336 (19) | |
H5 | 0.1294 | 0.9357 | 0.0075 | 0.040* | |
C6 | 0.2692 (10) | 0.9923 (14) | 0.2856 (4) | 0.033 (2) | |
H6A | 0.2773 | 1.0818 | 0.3241 | 0.050* | |
H6B | 0.3287 | 0.8512 | 0.2931 | 0.050* | |
H6C | 0.1580 | 0.9573 | 0.2726 | 0.050* | |
C7 | 0.2098 (11) | 1.3837 (14) | 0.2192 (4) | 0.039 (2) | |
H7A | 0.2143 | 1.4624 | 0.2593 | 0.059* | |
H7B | 0.1028 | 1.3253 | 0.2078 | 0.059* | |
H7C | 0.2371 | 1.4893 | 0.1871 | 0.059* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Pt | 0.02837 (17) | 0.02433 (18) | 0.02783 (17) | 0.00028 (15) | −0.00126 (11) | −0.00113 (15) |
Cl1 | 0.0290 (10) | 0.0400 (14) | 0.0361 (10) | −0.0019 (9) | −0.0013 (8) | −0.0016 (9) |
Cl2 | 0.0296 (10) | 0.0349 (12) | 0.0316 (10) | −0.0001 (8) | −0.0006 (8) | −0.0040 (8) |
S | 0.0325 (11) | 0.0275 (11) | 0.0323 (10) | 0.0000 (9) | 0.0009 (9) | −0.0050 (9) |
N | 0.025 (3) | 0.027 (4) | 0.035 (4) | −0.005 (3) | −0.001 (3) | 0.003 (3) |
C1 | 0.032 (4) | 0.042 (6) | 0.032 (4) | 0.005 (4) | 0.005 (4) | −0.002 (4) |
C2 | 0.026 (4) | 0.032 (5) | 0.042 (5) | 0.000 (3) | 0.004 (4) | 0.002 (4) |
C3 | 0.040 (5) | 0.036 (5) | 0.029 (4) | −0.006 (4) | 0.004 (4) | −0.002 (4) |
C4 | 0.034 (5) | 0.038 (5) | 0.032 (4) | −0.001 (4) | −0.007 (4) | 0.000 (4) |
C5 | 0.034 (5) | 0.025 (5) | 0.041 (5) | 0.000 (4) | −0.003 (4) | 0.001 (4) |
C6 | 0.043 (5) | 0.028 (5) | 0.028 (4) | −0.002 (4) | −0.001 (4) | 0.000 (3) |
C7 | 0.055 (6) | 0.032 (5) | 0.031 (4) | 0.009 (4) | 0.007 (4) | 0.000 (4) |
Geometric parameters (Å, º) top
Pt—N | 2.042 (6) | C3—C4 | 1.402 (12) |
Pt—S | 2.275 (2) | C3—H3 | 0.95 |
Pt—Cl1 | 2.309 (2) | C4—C5 | 1.376 (11) |
Pt—Cl2 | 2.307 (2) | C4—H4 | 0.95 |
S—C6 | 1.794 (8) | C5—H5 | 0.95 |
S—C7 | 1.813 (8) | C6—H6A | 0.98 |
N—C1 | 1.344 (11) | C6—H6B | 0.98 |
N—C5 | 1.355 (9) | C6—H6C | 0.98 |
C1—C2 | 1.379 (12) | C7—H7A | 0.98 |
C1—H1 | 0.95 | C7—H7B | 0.98 |
C2—C3 | 1.383 (10) | C7—H7C | 0.98 |
C2—H2 | 0.95 | | |
| | | |
N—Pt—S | 176.36 (18) | C4—C3—H3 | 121.0 |
N—Pt—Cl1 | 88.66 (18) | C5—C4—C3 | 119.8 (7) |
S—Pt—Cl1 | 92.65 (8) | C5—C4—H4 | 120.1 |
N—Pt—Cl2 | 89.66 (18) | C3—C4—H4 | 120.1 |
S—Pt—Cl2 | 89.20 (7) | N—C5—C4 | 121.8 (8) |
Cl2—Pt—Cl1 | 176.60 (7) | N—C5—H5 | 119.1 |
C6—S—C7 | 98.9 (4) | C4—C5—H5 | 119.1 |
C6—S—Pt | 106.4 (3) | S—C6—H6A | 109.5 |
C7—S—Pt | 108.2 (3) | S—C6—H6B | 109.5 |
C1—N—C5 | 118.0 (7) | H6A—C6—H6B | 109.5 |
C1—N—Pt | 120.3 (5) | S—C6—H6C | 109.5 |
C5—N—Pt | 121.6 (6) | H6A—C6—H6C | 109.5 |
N—C1—C2 | 123.2 (7) | H6B—C6—H6C | 109.5 |
N—C1—H1 | 118.4 | S—C7—H7A | 109.5 |
C2—C1—H1 | 118.4 | S—C7—H7B | 109.5 |
C1—C2—C3 | 119.1 (8) | H7A—C7—H7B | 109.5 |
C1—C2—H2 | 120.4 | S—C7—H7C | 109.5 |
C3—C2—H2 | 120.4 | H7A—C7—H7C | 109.5 |
C2—C3—C4 | 118.0 (8) | H7B—C7—H7C | 109.5 |
C2—C3—H3 | 121.0 | | |
| | | |
Cl1—Pt—S—C6 | 52.9 (3) | C5—N—C1—C2 | −2.0 (12) |
Cl2—Pt—S—C6 | −130.0 (3) | Pt—N—C1—C2 | 175.2 (6) |
Cl1—Pt—S—C7 | −52.6 (3) | N—C1—C2—C3 | 0.4 (13) |
Cl2—Pt—S—C7 | 124.6 (3) | C1—C2—C3—C4 | 1.7 (12) |
Cl1—Pt—N—C1 | −115.9 (6) | C2—C3—C4—C5 | −2.2 (12) |
Cl2—Pt—N—C1 | 67.0 (6) | C1—N—C5—C4 | 1.4 (12) |
Cl1—Pt—N—C5 | 61.2 (6) | Pt—N—C5—C4 | −175.8 (6) |
Cl2—Pt—N—C5 | −115.9 (6) | C3—C4—C5—N | 0.7 (13) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7B···Cl1 | 0.98 | 2.85 | 3.484 (9) | 123 |
C4—H4···Cl1i | 0.95 | 2.95 | 3.752 (9) | 142 |
C3—H3···Cl1ii | 0.95 | 2.82 | 3.632 (8) | 144 |
C6—H6B···Cl2iii | 0.98 | 2.90 | 3.773 (8) | 148 |
C6—H6A···Cl2iv | 0.98 | 2.90 | 3.711 (8) | 140 |
C7—H7A···Cl2iv | 0.98 | 2.99 | 3.772 (9) | 138 |
C3—H3···Cl2v | 0.95 | 2.99 | 3.640 (9) | 127 |
Symmetry codes: (i) −x, −y+2, −z; (ii) −x, −y+1, −z; (iii) −x+1, y−1/2, −z+1/2; (iv) −x+1, y+1/2, −z+1/2; (v) −x+1, −y+1, −z. |
Experimental details
Crystal data |
Chemical formula | [PtCl2(C5H5N)(C2H6S)] |
Mr | 407.22 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 8.5159 (17), 5.9128 (12), 21.586 (4) |
β (°) | 96.32 (3) |
V (Å3) | 1080.3 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 13.62 |
Crystal size (mm) | 0.22 × 0.22 × 0.19 |
|
Data collection |
Diffractometer | Nonius KappaCCD area-detector diffractometer |
Absorption correction | Multi-scan DENZO-SMN (Otwinowski & Minor, 1997) |
Tmin, Tmax | 0.060, 0.075 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11912, 2459, 1756 |
Rint | 0.096 |
(sin θ/λ)max (Å−1) | 0.650 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.082, 0.97 |
No. of reflections | 2459 |
No. of parameters | 111 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 2.14, −1.94 |
Selected geometric parameters (Å, º) topPt—N | 2.042 (6) | Pt—Cl2 | 2.307 (2) |
Pt—S | 2.275 (2) | S—C6 | 1.794 (8) |
Pt—Cl1 | 2.309 (2) | S—C7 | 1.813 (8) |
| | | |
N—Pt—S | 176.36 (18) | C6—S—C7 | 98.9 (4) |
Cl2—Pt—Cl1 | 176.60 (7) | | |
| | | |
Cl1—Pt—S—C6 | 52.9 (3) | Cl2—Pt—N—C1 | 67.0 (6) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7B···Cl1 | 0.98 | 2.85 | 3.484 (9) | 123 |
C4—H4···Cl1i | 0.95 | 2.95 | 3.752 (9) | 142 |
C3—H3···Cl1ii | 0.95 | 2.82 | 3.632 (8) | 144 |
C6—H6B···Cl2iii | 0.98 | 2.90 | 3.773 (8) | 148 |
C6—H6A···Cl2iv | 0.98 | 2.90 | 3.711 (8) | 140 |
C7—H7A···Cl2iv | 0.98 | 2.99 | 3.772 (9) | 138 |
C3—H3···Cl2v | 0.95 | 2.99 | 3.640 (9) | 127 |
Symmetry codes: (i) −x, −y+2, −z; (ii) −x, −y+1, −z; (iii) −x+1, y−1/2, −z+1/2; (iv) −x+1, y+1/2, −z+1/2; (v) −x+1, −y+1, −z. |
The trans-ligand effect on the Pt-S distance (Å) for [Pt(SMe2)L3] complexes topLtrans | Average Pt-S | Ref. codes |
Cl− | 2.268 (4) | JASMULa, MINNECb, VAYWOHc, WENJIId |
SMe2 | 2.292 (3) | RIXSAXe, TIVLOZf |
Phenyl | 2.380 (10) | FAZVORg |
References: (a) Huffman & Lloyd (1989); (b) Otto & Johansson (2002); (c) Horn et al. (1990); (d) Kapoor et al. (1998); (e) Wendt et al., 1997; (f) Kapoor et al. (1996); (g) Alibrandi et al. (1987). |
The trans-ligand effect on the Pt-N distance (Å) for [Pt(pyridine)L3] complexes topLtrans | Average Pt-N | Ref. codes |
-ONO2− | 2.01 (2) | ICUVEHa |
Cl− | 2.026 (12) | CCPYPTb, KIHYOPc, IGOROLd |
pyridine | 2.027 (6) | CIWKEY01e, ICUVADa, MIJWEHf, SESDOJg TCPYPTh |
I− | 2.044 (6) | KARTIGi |
S(═0)(p-tol)(Me) | 2.048 (9)* | IGORURd |
-CH2NC5H5 | 2.101 (10)* | FEZWEMj |
AsPh3 | 2.109 (5)* | XOTRIHk |
Phenyl | 2.140 (4)* | HEWNUSl |
Notes: (a) Tessier & Rochon (2001); (b) Colamarino & Orioli (1975); (c) Belsky et al. (1991); (d) Skvortsov et al. (2002); (e) Wei et al. (1989); (f) Fontes et al. (2001); (g) Pombrik et al. (1988); (h) Caira & Nassimbeni (1975); (i) Tessier & Rochon (1999); (j) Hanks et al. (1987); (k) Kuznik & Wendt (2002); (l) Romeo et al. (1994). (*) Estimated s.u. for the bond length. |
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The trans influence, i.e. the change in ground-state thermodynamic properties due to trans-ligand effects, has been widely studied, particularly for square-planar PtII complexes (Pidcock et al., 1966; Crabtree, 1988, Anderson & Orpen, 2001). Zumdahl & Drago (1968) have shown that the trans influence is due to the σ-donation ability of the trans ligand; stronger σ donors show a stronger trans influence, as noted by a weaker overlap of the ligand trans to the Pt atom. Some cis influence is also predicted. X-ray crystallographic studies have clearly shown the trans influence in Pt—Cl bond distances (Appleton et al., 1973; Kapoor et al., 1996, 1998; Norén et al., 1997; Otto & Johansson, 2002). In the title compound, trans-[PtCl2(NC5H5)S(CH3)2], (I), the dimethyl sulfide ligand is trans to a pyridine ligand. Compound (I) is the first structurally characterized trans-[PtLSMe2Cl2] complex to be published. \sch
In (I), the Pt atom is in a slightly distorted squar-planar environment, with the coordination sphere consisting of trans Cl atoms, a dimethyl sulfide ligand and a pyridine ligand (Fig. 1). Selected geometric parameters for (I) are given in Table 1. The geometry about the Pt atom deviates little from an ideal square plane; the S—Pt—Cl1 angle [92.65 (8)°] is slightly larger than 90° in order to accommodate the methyl groups of the dimethyl sulfide ligand. The Pt atom is almost exactly coplanar with the plane defined by the four atoms bonded to it, with a deviation from the plane of 0.0029 (19) Å. The pyridine ring is tilted at an angle of 64.5 (2)° to the square plane. The angle between the PtCl2NS and SC2 planes is 87.0 (2)°.
In the crystal of (I), there are extensive weak C—H···Cl interactions (Table 2), the shortest of which connects molecules into centrosymmetric dimers (Fig. 2).
The dimethyl sulfide ligand is bonded via the S atom, which shows trigonal-pyramidal geometry. The S—C distances and C—S—C angles are close to the averages found for squar-planar PtII complexes in the Cambridge Structural Database (CSD, Version 5.24; Allen, 2002): the minimum and maximum C—S distances are 1.78 (2) and 1.796 (14) Å, respectively, and the mean OK? C—S—C angle is 99.3 (8)° for 21 observations. The Pt—Cl distance in (I) is comparable with those in tran-PtCl2 moieties, which have an average of 2.300 (11) Å for 397 examples in the CSD, and the Pt—N distance is about the same as the average [2.05 (4) Å, 44 observations].
A total of seven complexes with the general formula [PtSMe2L3], and 15 complexes of the general formula [Pt(pyridine)L3], where L is a simple monodentate ligand, have been structurally characterized and reported in the CSD. Table 3 lists the average Pt—S distances versus the trans-ligand for the first type. The structural trans-influence series from these observations is phenyl >> pyridine > SMe2 > Cl−.
Table 4 lists the average Pt—N distances versus the trans-ligand for the second type of complex, [Pt(pyridine)L3]. The Pt—N distances in trans-[Pt(pyridine)2Cl2], (CLPYPT; Colamarino & Oriolli, 1975) are unusually short [1.98 (1) Å] compared with the average calculated for trans pyridine ligands. As the authors state that the refinement showed problems, this value has been omitted. The structural trans-influence series follows the order: phenyl > AsPh3 > –CH2NC5H5 > –SCN− > pyridine > Cl− > –ONO2−.