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The crystal structures of closely related quinoline compounds substituted at the 2-position by a vinyl group, either including a Cl atom [2-(1-chloro-2-methylprop-1-enyl)-8-nitroquinoline, C13H11ClN2O2, (I)] or not [2-(2-methylprop-1-enyl)-8-nitroquinoline, C13H12N2O2, (II)], show an important deviation of the vinyl group from coplanarity with the quinoline ring system if the Cl atom is present. The nitro group is perpendicular [in (II)] or nearly so [in (I)] to the quinoline ring system. In (II), all non-H atoms except the nitro O atoms are located on a crystallographic mirror plane.
Supporting information
CCDC references: 669185; 669186
The compounds were synthesized according to the method of Verhaeghe et al. (2006).
All H-atom parameters were refined freely [C—H = 0.85 (2)–1.022 (12) Å in (I) and C—H = 0.965 (14)–1.029 (19) Å in (II)].
For both compounds, data collection: APEX2; cell refinement: APEX2; data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 1997).
(I) 2-(1-chloro-2-methylpropenyl)-8-nitroquinoline
top
Crystal data top
C13H11ClN2O2 | F(000) = 272 |
Mr = 262.69 | Dx = 1.444 Mg m−3 |
Monoclinic, P21 | Melting point: 401 K |
Hall symbol: P 2yb | Mo Kα radiation, λ = 0.71073 Å |
a = 8.6278 (2) Å | Cell parameters from 9787 reflections |
b = 6.6525 (2) Å | θ = 3.6–48.8° |
c = 11.3284 (3) Å | µ = 0.31 mm−1 |
β = 111.658 (1)° | T = 150 K |
V = 604.31 (3) Å3 | Prism, translucent colourless |
Z = 2 | 0.59 × 0.34 × 0.23 mm |
Data collection top
Bruker APEXII CCD area-detector diffractometer | 8940 reflections with I > 2σ(I) |
Radiation source: sealed tube | Rint = 0.023 |
Graphite monochromator | θmax = 45.5°, θmin = 2.5° |
phi and ω scans | h = −16→17 |
45955 measured reflections | k = −13→13 |
9975 independent reflections | l = −22→22 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.029 | All H-atom parameters refined |
wR(F2) = 0.082 | w = 1/[σ2(Fo2) + (0.0513P)2 + 0.0106P] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max = 0.002 |
9975 reflections | Δρmax = 0.55 e Å−3 |
207 parameters | Δρmin = −0.44 e Å−3 |
1 restraint | Absolute structure: Flack (1983), 4595 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.02 (2) |
Crystal data top
C13H11ClN2O2 | V = 604.31 (3) Å3 |
Mr = 262.69 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 8.6278 (2) Å | µ = 0.31 mm−1 |
b = 6.6525 (2) Å | T = 150 K |
c = 11.3284 (3) Å | 0.59 × 0.34 × 0.23 mm |
β = 111.658 (1)° | |
Data collection top
Bruker APEXII CCD area-detector diffractometer | 8940 reflections with I > 2σ(I) |
45955 measured reflections | Rint = 0.023 |
9975 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.029 | All H-atom parameters refined |
wR(F2) = 0.082 | Δρmax = 0.55 e Å−3 |
S = 1.06 | Δρmin = −0.44 e Å−3 |
9975 reflections | Absolute structure: Flack (1983), 4595 Friedel pairs |
207 parameters | Absolute structure parameter: 0.02 (2) |
1 restraint | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N1 | 0.02466 (5) | 0.63126 (8) | 0.72838 (4) | 0.01193 (6) | |
C2 | 0.18843 (6) | 0.63258 (9) | 0.78762 (5) | 0.01207 (7) | |
C3 | 0.30191 (6) | 0.63868 (10) | 0.72316 (6) | 0.01497 (8) | |
H3 | 0.4213 (19) | 0.642 (3) | 0.7703 (15) | 0.023 (3)* | |
C4 | 0.24060 (7) | 0.64404 (10) | 0.59322 (6) | 0.01547 (8) | |
H4 | 0.306 (2) | 0.636 (3) | 0.5417 (14) | 0.024 (3)* | |
C4A | 0.06634 (7) | 0.64360 (9) | 0.52595 (5) | 0.01314 (7) | |
C5 | −0.00734 (8) | 0.64532 (10) | 0.39136 (5) | 0.01646 (9) | |
H5 | 0.056 (2) | 0.643 (4) | 0.3397 (17) | 0.036 (4)* | |
C6 | −0.17734 (9) | 0.64050 (11) | 0.33036 (5) | 0.01788 (9) | |
H6 | −0.234 (2) | 0.642 (3) | 0.2385 (14) | 0.023 (3)* | |
C7 | −0.28168 (8) | 0.63302 (11) | 0.40162 (5) | 0.01688 (9) | |
H7 | −0.410 (2) | 0.626 (3) | 0.3545 (16) | 0.028 (4)* | |
C8 | −0.21056 (6) | 0.63563 (10) | 0.53138 (5) | 0.01372 (7) | |
C8A | −0.03604 (6) | 0.63950 (9) | 0.59934 (5) | 0.01156 (7) | |
C9 | 0.25245 (6) | 0.62828 (10) | 0.92832 (5) | 0.01384 (7) | |
Cl1 | 0.40550 (2) | 0.44320 (4) | 0.992777 (17) | 0.02599 (5) | |
C10 | 0.20757 (7) | 0.74991 (10) | 1.00440 (5) | 0.01551 (8) | |
C11 | 0.08555 (11) | 0.91861 (13) | 0.95364 (7) | 0.02266 (12) | |
H11A | 0.049 (2) | 0.935 (4) | 0.8615 (14) | 0.028 (3)* | |
H11B | 0.000 (3) | 0.899 (4) | 0.980 (2) | 0.050 (6)* | |
H11C | 0.139 (3) | 1.038 (4) | 0.9909 (19) | 0.046 (5)* | |
C12 | 0.27972 (11) | 0.73368 (15) | 1.14658 (6) | 0.02407 (13) | |
H12A | 0.198 (2) | 0.788 (4) | 1.1832 (18) | 0.039 (5)* | |
H12B | 0.301 (3) | 0.610 (4) | 1.172 (2) | 0.053 (6)* | |
H12C | 0.361 (3) | 0.808 (5) | 1.176 (2) | 0.060 (7)* | |
N2 | −0.32150 (6) | 0.62788 (12) | 0.60284 (5) | 0.01905 (9) | |
O2 | −0.41357 (8) | 0.47998 (13) | 0.58512 (7) | 0.02795 (13) | |
O1 | −0.31845 (8) | 0.76646 (16) | 0.67379 (7) | 0.03291 (17) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.01043 (13) | 0.01378 (16) | 0.01126 (13) | 0.00101 (13) | 0.00364 (10) | 0.00055 (13) |
C2 | 0.01033 (14) | 0.01196 (17) | 0.01353 (15) | 0.00083 (14) | 0.00395 (12) | 0.00015 (15) |
C3 | 0.01169 (16) | 0.01539 (19) | 0.01899 (19) | 0.00065 (16) | 0.00702 (14) | −0.00012 (18) |
C4 | 0.01519 (18) | 0.0153 (2) | 0.01937 (19) | 0.00050 (16) | 0.01044 (15) | 0.00014 (18) |
C4A | 0.01633 (17) | 0.01137 (17) | 0.01385 (16) | 0.00046 (15) | 0.00805 (14) | 0.00010 (15) |
C5 | 0.0236 (2) | 0.0142 (2) | 0.01403 (17) | 0.00023 (19) | 0.00976 (16) | 0.00034 (17) |
C6 | 0.0258 (2) | 0.0157 (2) | 0.01146 (16) | 0.0016 (2) | 0.00605 (16) | 0.00086 (17) |
C7 | 0.01767 (19) | 0.0183 (2) | 0.01186 (16) | 0.00310 (19) | 0.00213 (14) | 0.00060 (17) |
C8 | 0.01242 (15) | 0.01629 (19) | 0.01160 (15) | 0.00261 (16) | 0.00344 (12) | 0.00036 (16) |
C8A | 0.01167 (15) | 0.01190 (17) | 0.01142 (14) | 0.00133 (14) | 0.00461 (12) | 0.00023 (14) |
C9 | 0.01140 (15) | 0.01420 (19) | 0.01359 (16) | 0.00054 (15) | 0.00187 (12) | 0.00140 (16) |
Cl1 | 0.02318 (7) | 0.02529 (8) | 0.02324 (7) | 0.01106 (6) | 0.00123 (5) | 0.00584 (6) |
C10 | 0.01560 (19) | 0.0175 (2) | 0.01256 (17) | −0.00187 (16) | 0.00418 (14) | −0.00001 (16) |
C11 | 0.0284 (3) | 0.0223 (3) | 0.0192 (2) | 0.0075 (2) | 0.0110 (2) | −0.0005 (2) |
C12 | 0.0258 (3) | 0.0305 (4) | 0.01260 (19) | −0.0053 (3) | 0.00322 (19) | −0.0006 (2) |
N2 | 0.01086 (15) | 0.0311 (3) | 0.01429 (16) | 0.00479 (18) | 0.00354 (12) | 0.00092 (19) |
O2 | 0.0186 (2) | 0.0375 (4) | 0.0297 (3) | −0.0027 (2) | 0.01124 (18) | 0.0044 (2) |
O1 | 0.0214 (2) | 0.0510 (5) | 0.0281 (3) | 0.0040 (3) | 0.0111 (2) | −0.0161 (3) |
Geometric parameters (Å, º) top
N1—C2 | 1.3218 (6) | C7—H7 | 1.039 (17) |
N1—C8A | 1.3598 (6) | C8—C8A | 1.4159 (7) |
C2—C3 | 1.4217 (7) | C8—N2 | 1.4649 (7) |
C2—C9 | 1.4821 (7) | C9—C10 | 1.3394 (9) |
C3—C4 | 1.3686 (8) | C9—Cl1 | 1.7553 (6) |
C3—H3 | 0.970 (16) | C10—C12 | 1.5011 (9) |
C4—C4A | 1.4126 (8) | C10—C11 | 1.5006 (10) |
C4—H4 | 0.951 (15) | C11—H11A | 0.979 (15) |
C4A—C5 | 1.4190 (8) | C11—H11B | 0.90 (3) |
C4A—C8A | 1.4193 (7) | C11—H11C | 0.94 (3) |
C5—C6 | 1.3718 (10) | C12—H12A | 1.00 (2) |
C5—H5 | 0.937 (18) | C12—H12B | 0.87 (3) |
C6—C7 | 1.4145 (9) | C12—H12C | 0.82 (3) |
C6—H6 | 0.973 (15) | N2—O1 | 1.2170 (10) |
C7—C8 | 1.3682 (7) | N2—O2 | 1.2335 (11) |
| | | |
C2—N1—C8A | 117.45 (4) | N1—C8A—C8 | 119.61 (4) |
N1—C2—C3 | 123.31 (5) | N1—C8A—C4A | 123.67 (5) |
N1—C2—C9 | 116.76 (4) | C8—C8A—C4A | 116.66 (4) |
C3—C2—C9 | 119.93 (4) | C10—C9—C2 | 126.79 (5) |
C4—C3—C2 | 119.15 (5) | C10—C9—Cl1 | 120.52 (4) |
C4—C3—H3 | 120.2 (9) | C2—C9—Cl1 | 112.67 (4) |
C2—C3—H3 | 120.7 (9) | C9—C10—C12 | 122.90 (6) |
C3—C4—C4A | 119.48 (5) | C9—C10—C11 | 122.26 (5) |
C3—C4—H4 | 125.3 (10) | C12—C10—C11 | 114.80 (6) |
C4A—C4—H4 | 115.0 (10) | C10—C11—H11A | 113.4 (13) |
C4—C4A—C5 | 123.04 (5) | C10—C11—H11B | 107.8 (18) |
C4—C4A—C8A | 116.91 (5) | H11A—C11—H11B | 113.1 (18) |
C5—C4A—C8A | 120.04 (5) | C10—C11—H11C | 107.5 (14) |
C6—C5—C4A | 120.85 (5) | H11A—C11—H11C | 107.0 (19) |
C6—C5—H5 | 116.5 (11) | H11B—C11—H11C | 108 (2) |
C4A—C5—H5 | 122.5 (11) | C10—C12—H12A | 109.9 (11) |
C5—C6—C7 | 120.04 (5) | C10—C12—H12B | 112.1 (16) |
C5—C6—H6 | 123.9 (9) | H12A—C12—H12B | 107 (2) |
C7—C6—H6 | 116.0 (9) | C10—C12—H12C | 109.8 (17) |
C8—C7—C6 | 119.03 (6) | H12A—C12—H12C | 104 (2) |
C8—C7—H7 | 121.5 (9) | H12B—C12—H12C | 113 (3) |
C6—C7—H7 | 119.4 (9) | O1—N2—O2 | 124.57 (7) |
C7—C8—C8A | 123.34 (5) | O1—N2—C8 | 118.62 (7) |
C7—C8—N2 | 117.89 (5) | O2—N2—C8 | 116.81 (6) |
C8A—C8—N2 | 118.74 (4) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O2i | 0.976 (12) | 2.482 (13) | 3.2098 (7) | 131.2 (10) |
Symmetry code: (i) x+1, y, z. |
(II) 2-(2-methylprop-1-enyl)-8-nitroquinoline
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Crystal data top
C13H12N2O2 | Dx = 1.359 Mg m−3 |
Mr = 228.25 | Melting point: 363 K |
Orthorhombic, Pnma | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 9387 reflections |
a = 11.5578 (5) Å | θ = 2.3–33.2° |
b = 6.8987 (3) Å | µ = 0.09 mm−1 |
c = 13.9900 (6) Å | T = 150 K |
V = 1115.48 (8) Å3 | Prism, translucent pale orange |
Z = 4 | 0.54 × 0.25 × 0.20 mm |
F(000) = 480 | |
Data collection top
Bruker APEXII CCD area-detector diffractometer | 1973 reflections with I > 2σ(I) |
Radiation source: sealed tube | Rint = 0.026 |
Graphite monochromator | θmax = 33.2°, θmin = 2.9° |
phi and ω scans | h = −17→17 |
53490 measured reflections | k = −10→10 |
2280 independent reflections | l = −21→21 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.129 | All H-atom parameters refined |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0772P)2 + 0.2065P] where P = (Fo2 + 2Fc2)/3 |
2280 reflections | (Δ/σ)max = 0.001 |
132 parameters | Δρmax = 0.53 e Å−3 |
0 restraints | Δρmin = −0.19 e Å−3 |
Crystal data top
C13H12N2O2 | V = 1115.48 (8) Å3 |
Mr = 228.25 | Z = 4 |
Orthorhombic, Pnma | Mo Kα radiation |
a = 11.5578 (5) Å | µ = 0.09 mm−1 |
b = 6.8987 (3) Å | T = 150 K |
c = 13.9900 (6) Å | 0.54 × 0.25 × 0.20 mm |
Data collection top
Bruker APEXII CCD area-detector diffractometer | 1973 reflections with I > 2σ(I) |
53490 measured reflections | Rint = 0.026 |
2280 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.040 | 0 restraints |
wR(F2) = 0.129 | All H-atom parameters refined |
S = 1.09 | Δρmax = 0.53 e Å−3 |
2280 reflections | Δρmin = −0.19 e Å−3 |
132 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N1 | 0.78011 (7) | 0.2500 | 0.47854 (6) | 0.01658 (17) | |
C2 | 0.74002 (8) | 0.2500 | 0.56744 (6) | 0.01613 (17) | |
C3 | 0.81541 (8) | 0.2500 | 0.64820 (7) | 0.01892 (19) | |
H3 | 0.7777 (15) | 0.2500 | 0.7138 (12) | 0.024 (4)* | |
C4 | 0.93238 (8) | 0.2500 | 0.63549 (7) | 0.01976 (19) | |
H4 | 0.9854 (16) | 0.2500 | 0.6928 (13) | 0.029 (4)* | |
C4A | 0.97806 (8) | 0.2500 | 0.54161 (7) | 0.01659 (18) | |
C5 | 1.09778 (8) | 0.2500 | 0.52090 (7) | 0.01963 (19) | |
H5 | 1.1507 (16) | 0.2500 | 0.5747 (13) | 0.032 (4)* | |
C6 | 1.13621 (8) | 0.2500 | 0.42820 (7) | 0.0213 (2) | |
H6 | 1.2220 (16) | 0.2500 | 0.4085 (13) | 0.030 (4)* | |
C7 | 1.05655 (9) | 0.2500 | 0.35169 (7) | 0.0209 (2) | |
H7 | 1.0837 (15) | 0.2500 | 0.2831 (13) | 0.028 (4)* | |
C8 | 0.94126 (8) | 0.2500 | 0.37234 (6) | 0.01737 (18) | |
C8A | 0.89640 (8) | 0.2500 | 0.46641 (6) | 0.01502 (17) | |
C9 | 0.61516 (8) | 0.2500 | 0.58622 (7) | 0.01895 (19) | |
H9 | 0.5940 (15) | 0.2500 | 0.6555 (13) | 0.030 (4)* | |
C10 | 0.52460 (8) | 0.2500 | 0.52559 (7) | 0.01916 (19) | |
C11 | 0.53000 (9) | 0.2500 | 0.41864 (8) | 0.0235 (2) | |
H11A | 0.4861 (14) | 0.137 (3) | 0.3953 (11) | 0.057 (4)* | |
H11B | 0.6076 (19) | 0.2500 | 0.3924 (15) | 0.044 (5)* | |
C12 | 0.40412 (9) | 0.2500 | 0.56518 (9) | 0.0261 (2) | |
H12A | 0.3640 (12) | 0.134 (2) | 0.5456 (9) | 0.035 (3)* | |
H12B | 0.4061 (18) | 0.2500 | 0.6342 (15) | 0.041 (5)* | |
N2 | 0.85661 (8) | 0.2500 | 0.29425 (6) | 0.0234 (2) | |
O1 | 0.82404 (8) | 0.09482 (13) | 0.26381 (6) | 0.0468 (2) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.0114 (3) | 0.0229 (4) | 0.0155 (3) | 0.000 | −0.0002 (2) | 0.000 |
C2 | 0.0119 (3) | 0.0212 (4) | 0.0154 (4) | 0.000 | −0.0002 (3) | 0.000 |
C3 | 0.0141 (4) | 0.0288 (5) | 0.0139 (4) | 0.000 | −0.0001 (3) | 0.000 |
C4 | 0.0135 (4) | 0.0300 (5) | 0.0157 (4) | 0.000 | −0.0019 (3) | 0.000 |
C4A | 0.0120 (3) | 0.0214 (4) | 0.0164 (4) | 0.000 | −0.0010 (3) | 0.000 |
C5 | 0.0117 (4) | 0.0282 (5) | 0.0191 (4) | 0.000 | −0.0014 (3) | 0.000 |
C6 | 0.0126 (4) | 0.0303 (5) | 0.0210 (4) | 0.000 | 0.0014 (3) | 0.000 |
C7 | 0.0145 (4) | 0.0304 (5) | 0.0177 (4) | 0.000 | 0.0023 (3) | 0.000 |
C8 | 0.0135 (4) | 0.0237 (4) | 0.0149 (4) | 0.000 | −0.0007 (3) | 0.000 |
C8A | 0.0116 (3) | 0.0187 (4) | 0.0148 (4) | 0.000 | −0.0004 (3) | 0.000 |
C9 | 0.0118 (4) | 0.0275 (4) | 0.0175 (4) | 0.000 | 0.0009 (3) | 0.000 |
C10 | 0.0124 (4) | 0.0243 (4) | 0.0208 (4) | 0.000 | −0.0006 (3) | 0.000 |
C11 | 0.0166 (4) | 0.0328 (5) | 0.0210 (4) | 0.000 | −0.0048 (3) | 0.000 |
C12 | 0.0119 (4) | 0.0377 (6) | 0.0287 (5) | 0.000 | 0.0009 (3) | 0.000 |
N2 | 0.0159 (4) | 0.0396 (5) | 0.0147 (4) | 0.000 | −0.0001 (3) | 0.000 |
O1 | 0.0513 (5) | 0.0502 (5) | 0.0390 (4) | −0.0147 (4) | −0.0213 (3) | −0.0059 (3) |
Geometric parameters (Å, º) top
N1—C2 | 1.3272 (12) | C7—C8 | 1.3634 (13) |
N1—C8A | 1.3547 (11) | C7—H7 | 1.010 (18) |
C2—C3 | 1.4269 (13) | C8—C8A | 1.4145 (12) |
C2—C9 | 1.4668 (13) | C8—N2 | 1.4666 (12) |
C3—C4 | 1.3635 (13) | C9—C10 | 1.3472 (13) |
C3—H3 | 1.016 (17) | C9—H9 | 1.000 (18) |
C4—C4A | 1.4155 (13) | C10—C11 | 1.4976 (15) |
C4—H4 | 1.010 (18) | C10—C12 | 1.4986 (14) |
C4A—C8A | 1.4135 (13) | C11—H11A | 0.988 (17) |
C4A—C5 | 1.4137 (13) | C11—H11B | 0.97 (2) |
C5—C6 | 1.3708 (14) | C12—H12A | 0.965 (14) |
C5—H5 | 0.970 (19) | C12—H12B | 0.97 (2) |
C6—C7 | 1.4119 (14) | N2—O1 | 1.2120 (9) |
C6—H6 | 1.029 (19) | N2—O1i | 1.2120 (9) |
| | | |
C2—N1—C8A | 117.63 (8) | C7—C8—C8A | 123.74 (9) |
N1—C2—C3 | 121.93 (8) | C7—C8—N2 | 119.61 (8) |
N1—C2—C9 | 120.76 (8) | C8A—C8—N2 | 116.65 (8) |
C3—C2—C9 | 117.32 (8) | N1—C8A—C4A | 124.70 (9) |
C4—C3—C2 | 120.15 (9) | N1—C8A—C8 | 118.70 (8) |
C4—C3—H3 | 122.9 (10) | C4A—C8A—C8 | 116.60 (8) |
C2—C3—H3 | 117.0 (10) | C10—C9—C2 | 130.66 (9) |
C3—C4—C4A | 119.40 (9) | C10—C9—H9 | 114.8 (10) |
C3—C4—H4 | 119.9 (10) | C2—C9—H9 | 114.5 (10) |
C4A—C4—H4 | 120.7 (10) | C9—C10—C11 | 126.63 (9) |
C8A—C4A—C5 | 120.07 (9) | C9—C10—C12 | 119.29 (9) |
C8A—C4A—C4 | 116.20 (8) | C11—C10—C12 | 114.08 (9) |
C5—C4A—C4 | 123.73 (9) | C10—C11—H11A | 108.0 (9) |
C6—C5—C4A | 120.73 (9) | C10—C11—H11B | 114.6 (12) |
C6—C5—H5 | 122.0 (11) | H11A—C11—H11B | 110.5 (11) |
C4A—C5—H5 | 117.3 (11) | C10—C12—H12A | 110.0 (8) |
C5—C6—C7 | 120.39 (9) | C10—C12—H12B | 110.3 (12) |
C5—C6—H6 | 124.5 (11) | H12A—C12—H12B | 107.2 (10) |
C7—C6—H6 | 115.1 (11) | O1—N2—O1i | 124.08 (10) |
C8—C7—C6 | 118.47 (9) | O1—N2—C8 | 117.96 (5) |
C8—C7—H7 | 120.3 (10) | O1i—N2—C8 | 117.96 (5) |
C6—C7—H7 | 121.2 (10) | | |
Symmetry code: (i) x, −y+1/2, z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C11—H11B···N1 | 0.97 (2) | 2.33 (2) | 3.0097 (13) | 127 (2) |
Experimental details
| (I) | (II) |
Crystal data |
Chemical formula | C13H11ClN2O2 | C13H12N2O2 |
Mr | 262.69 | 228.25 |
Crystal system, space group | Monoclinic, P21 | Orthorhombic, Pnma |
Temperature (K) | 150 | 150 |
a, b, c (Å) | 8.6278 (2), 6.6525 (2), 11.3284 (3) | 11.5578 (5), 6.8987 (3), 13.9900 (6) |
α, β, γ (°) | 90, 111.658 (1), 90 | 90, 90, 90 |
V (Å3) | 604.31 (3) | 1115.48 (8) |
Z | 2 | 4 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.31 | 0.09 |
Crystal size (mm) | 0.59 × 0.34 × 0.23 | 0.54 × 0.25 × 0.20 |
|
Data collection |
Diffractometer | Bruker APEXII CCD area-detector diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | – | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 45955, 9975, 8940 | 53490, 2280, 1973 |
Rint | 0.023 | 0.026 |
(sin θ/λ)max (Å−1) | 1.003 | 0.770 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.029, 0.082, 1.06 | 0.040, 0.129, 1.09 |
No. of reflections | 9975 | 2280 |
No. of parameters | 207 | 132 |
No. of restraints | 1 | 0 |
H-atom treatment | All H-atom parameters refined | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.55, −0.44 | 0.53, −0.19 |
Absolute structure | Flack (1983), 4595 Friedel pairs | ? |
Absolute structure parameter | 0.02 (2) | ? |
Selected bond lengths (Å) for (I) topC2—C9 | 1.4821 (7) | C9—Cl1 | 1.7553 (6) |
C9—C10 | 1.3394 (9) | | |
Hydrogen-bond geometry (Å, º) for (I) top
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O2i | 0.976 (12) | 2.482 (13) | 3.2098 (7) | 131.2 (10) |
Symmetry code: (i) x+1, y, z. |
Selected bond lengths (Å) for (II) topC2—C9 | 1.4668 (13) | C9—C10 | 1.3472 (13) |
Hydrogen-bond geometry (Å, º) for (II) top
D—H···A | D—H | H···A | D···A | D—H···A |
C11—H11B···N1 | 0.97 (2) | 2.33 (2) | 3.0097 (13) | 126.6 (16) |
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Recently, some 2-substituted quinoline compounds have been studied for their antiparasitic (Franck et al., 2004) and antiviral (Zouhiri et al., 2005) activities. Aiming at preparing original analogs with pharmacological potential in the quinoline series through a radical reaction approach, we developed a monoelectronic transfer synthesis by reacting nitrated 2-trihalomethylquinolines with 2-nitropropane salts, leading to the corresponding 2-isopropylidene-substituted products, (I) and (II), in high yields (Verhaeghe et al., 2006). Such C-alkylation and elimination reactions present the main advantage of permitting a one-step access to tri- or tetra-substituted vinyl derivatives through mild operating conditions. Different substrates were used for conducting this chemical work. Firstly, 8-nitro-2-trichloromethylquinoline led to the expected vinyl chloride product (I) by reacting with 2-nitroprane and tetrabutylammonium hydroxide, under light irradiation and inert atmosphere. Then 8-nitro-2-tribromomethylquinoline was reacted in the same conditions, and contrary to the previous results obtained, gave the unhalogenated vinyl product (II), previously synthesized by Nishikawa et al. (1980), most probably as a result of an initial in situ reduction of the tribromomethyl substrate into a dibromomethyl one.
The structural study of these two molecules had various objectives. It seemed important to define the relative position of the substituent in the 2-position with respect to the quinoline ring system, evaluating whether the vinyl bond was conjugated with the aromatic cycle or not. We also studied the coplanarity of the nitro group with respect to the quinoline ring system.
Fig. 1 shows views of the asymmetric units of 2-(1-chloro-2-methylpropenyl)-8-nitroquinoline, (I), and 2-(2-methylprop-1-enyl)-8-nitroquinoline, (II). The structures showed that the vinyl group at the 2-position is rigorously coplanar with the quinoline ring system in the nonhalogenated structure (II) [the dihedral angle is exactly 0.0 (s.u.?)°]. In fact, in the crystal structure of (II), all non-H atoms except the nitro group O atom are located on a crystallographic mirror plane, and so the atoms of both groups lie in the same plane. In (I), the vinyl group is strongly deviated from planarity with the quinoline ring system, with a dihedral angle of 51.60 (2)°. The the bond lengths in the vinyl group show that in (I) the first single bond (C2—C9) is longer than the corresponding bond (C2—C9) in (II). The vinyl double bond is shorter in (I) (Table 1). Comparison with reference lengths for single [C—C ≈ 1.53 (2) Å] and double bonds [C═C ≈ 1.3 2(1) Å] (Glusker et al., 1994) indicates that the vinyl bond is conjugated with the aromatic cycle in both structures, but more strongly in (II).
The nitro group is significantly inclined to the quinoline ring system in both structures. The dihedral angle is 90° in (II) and 61.73 (2)° in (I). Usually, nitro groups are found to be coplanar with aromatic rings, but a search among the structures deposited in the Cambridge Structural Database (CSD; Version 5.18; Allen, 2002) indicated that the nitro group attached to the phenyl ring can deviate somewhat from this coplanar arrangement (by as much as 70°; Zinner et al., 1994). The crystal structure of (II) shows that the vinyl group interacts through a weak hydrogen bond with the N atom of the quinoline ring system (Table 4), and so is situated on this side of the molecule. The steric encumbrance thus caused by the vinyl group obviates a coplanar orientation for the nitro fragment. In (I), the vinyl group deviates from coplanarity with the quinoline system, and so it does not introduce the steric hindrance it does in (II). Therefore, the deviation observed for the nitro group in (I) is probably caused by a weak hydrogen bond between one O atom (O2) of the nitro group and the C4/H4 group of the aromatic ring of a neighboring molecule (Table 2).
In (I), the quinoline rings stack in a nearly parallel orientation (with a dihedral angle of 3.06°), forming columns along b. Considering the interaction between the C6 and C5N rings, successive pairs along the stack have Cg···Cg distances of 3.5749 (3) Å [from the C6 ring at (x, y z) to the C5N ring at (−x, y − 1/2, −z + 1)] and 3.5911 (3) Å [C6(x, y, z) to C5N(−x, y + 1/2, −z + 1)] (Fig. 2). Each interaction in the column includes a slight slip in the c-axis direction. Thus, atom C4A is situated approximately facing the center of gravity of the benzene ring at (−x, y − 1/2, −z + 1), and atom C6 lies over the center of gravity of the pyridine ring at (−x, y − 1/2, −z + 1). These columns are related to each other in the a-axis direction through the weak hydrogen bond described above.
In (II), columns are formed in the b direction through stacking interactions with an interplanar distance of b/2 (approximately 3.45 Å; Fig. 3). The rings are rigorously parallel, and as in (I), alternate rings in the column are slipped (here, in the a direction). In this case, atom C4A is situated exactly facing the center of gravity of the benzene ring, and atom C6 faces the center of gravity of the pyridine ring of the neighbouring molecule at (2 − x, y + 1/2, 1 − z).