Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270104031385/fa1106sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270104031385/fa1106Isup2.hkl | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270104031385/fa1106IIsup3.hkl |
CCDC references: 249735; 264797
Nimbolide, (I), was isolated from the the fresh uncrushed leaves of Azadirachta indica following the procedure described by Govindachari et al. (1999). To prepare isonimbolide, (II), nimbolide (200 mg) was dissolved in chloroform (analytical reagent, 200 ml) at 258 K. To this, tetrabutyl ammonium bromide (145 mg) and boron triflouride etherate (0.3 ml) were added. The reaction mixture was allowed to reach room temperature and was stirred for 6 h. On completion of the reaction (monitored by thin-layer chromatography), it was quenched with solid sodium bicarbonate. The organic layer was filtered and concentrated under reduced pressure to yield the crude isonimbolide. Flash column chromatography of the product over silica gel using hexane ethyl acetate as eluent furnished pure isonimbolide. The final yield was 52%.
In the absence of suitable anomalous scatters, Friedel equivalents could not be used to determine the absolute structure. Refinement of the Flack parameter (Flack, 1983) led to inconclusive values (Flack & Bernadinelli, 2000) for this parameter [−0.8 (7) for nimbolide and −1(3) for isonimbolide]. Therefore, the 103 and 34 Friedel equivalents of nimbolide and isonimbolide, respectively, were merged before the final refinements. The enantiomer employed in the refined model was chosen to agree with the accepted configuration of triterpenoids (Henderson et al., 1968; Narayanan et al., 1964; Harris et al., 1968). The methyl and hydroxyl H atoms were constrained to an ideal geometry (C—H = 0.96 Å and O—H = 0.82 Å), with Uiso(H) = 1.5Ueq(parent atom), but were allowed to rotate freely about the C—C and C—O bonds, respectively. All remaining H atoms were placed in geometrically idealized positions (C—H = 0.97–0.98 Å) and constrained to ride on their parent atom, with Uiso(H) = 1.2Ueq(C). All the disordered atoms were restrained using SAME, SADI and DFIX restraints. A SIMU restraint was used for the chemically equivalent disordered congeners.
For both compounds, data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPIII (Burnett & Johnson, 1996); software used to prepare material for publication: SHELXL97 and PARST97 (Nardelli, 1995).
C27H30O7 | Dx = 1.332 Mg m−3 |
Mr = 466.51 | Cu Kα radiation, λ = 1.54178 Å |
Orthorhombic, P212121 | Cell parameters from 25 reflections |
a = 12.115 (3) Å | θ = 15–30° |
b = 12.225 (4) Å | µ = 0.79 mm−1 |
c = 15.710 (3) Å | T = 293 K |
V = 2326.8 (10) Å3 | Rod, colourless |
Z = 4 | 0.40 × 0.25 × 0.15 mm |
F(000) = 992 |
Enraf-Nonius CAD-4 diffractometer | Rint = 0.119 |
Radiation source: fine-focus sealed tube | θmax = 75.2°, θmin = 4.6° |
Graphite monochromator | h = −15→15 |
non–profiled ω/2θ scans | k = −5→15 |
2806 measured reflections | l = −10→19 |
2695 independent reflections | 3 standard reflections every 200 reflections |
1958 reflections with I > 2σ(I) | intensity decay: 4% |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.059 | H-atom parameters constrained |
wR(F2) = 0.183 | w = 1/[σ2(Fo2) + (0.1148P)2 + 0.6918P] where P = (Fo2 + 2Fc2)/3 |
S = 1.00 | (Δ/σ)max = 0.015 |
2695 reflections | Δρmax = 0.41 e Å−3 |
355 parameters | Δρmin = −0.29 e Å−3 |
108 restraints | Extinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0029 (6) |
C27H30O7 | V = 2326.8 (10) Å3 |
Mr = 466.51 | Z = 4 |
Orthorhombic, P212121 | Cu Kα radiation |
a = 12.115 (3) Å | µ = 0.79 mm−1 |
b = 12.225 (4) Å | T = 293 K |
c = 15.710 (3) Å | 0.40 × 0.25 × 0.15 mm |
Enraf-Nonius CAD-4 diffractometer | Rint = 0.119 |
2806 measured reflections | 3 standard reflections every 200 reflections |
2695 independent reflections | intensity decay: 4% |
1958 reflections with I > 2σ(I) |
R[F2 > 2σ(F2)] = 0.059 | 108 restraints |
wR(F2) = 0.183 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.41 e Å−3 |
2695 reflections | Δρmin = −0.29 e Å−3 |
355 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
O1 | 0.6613 (3) | 0.3608 (4) | 0.9991 (2) | 0.0863 (13) | |
O6 | 0.9127 (3) | 0.2687 (3) | 0.6940 (2) | 0.0615 (9) | |
O7 | 0.6887 (3) | 0.2937 (2) | 0.6557 (2) | 0.0534 (8) | |
O12 | 0.4232 (3) | 0.3780 (3) | 0.8542 (3) | 0.0766 (12) | |
O27 | 0.3838 (3) | 0.5555 (3) | 0.8562 (3) | 0.0842 (13) | |
O28 | 0.9928 (4) | 0.1214 (4) | 0.7530 (4) | 0.0926 (14) | |
C1 | 0.7359 (4) | 0.3384 (4) | 0.9499 (3) | 0.0556 (12) | |
C2 | 0.8079 (5) | 0.2456 (5) | 0.9693 (4) | 0.0775 (17) | |
H2 | 0.7932 | 0.2076 | 1.0193 | 0.093* | |
C3 | 0.8927 (5) | 0.2098 (5) | 0.9223 (4) | 0.0775 (17) | |
H3 | 0.9316 | 0.1476 | 0.9384 | 0.093* | |
C4 | 0.9240 (4) | 0.2706 (4) | 0.8439 (3) | 0.0569 (12) | |
C5 | 0.8214 (3) | 0.3291 (4) | 0.8117 (3) | 0.0437 (9) | |
H5 | 0.7688 | 0.2695 | 0.8018 | 0.052* | |
C6 | 0.8519 (4) | 0.3645 (4) | 0.7247 (3) | 0.0501 (10) | |
H6 | 0.9006 | 0.4284 | 0.7271 | 0.060* | |
C7 | 0.7492 (4) | 0.3904 (4) | 0.6733 (3) | 0.0467 (10) | |
H7 | 0.7711 | 0.4244 | 0.6194 | 0.056* | |
C8 | 0.6717 (4) | 0.4708 (3) | 0.7228 (3) | 0.0435 (9) | |
C9 | 0.6521 (3) | 0.4323 (3) | 0.8180 (3) | 0.0408 (9) | |
H9 | 0.6138 | 0.3620 | 0.8131 | 0.049* | |
C10 | 0.7588 (3) | 0.4066 (3) | 0.8702 (3) | 0.0453 (10) | |
C11 | 0.5697 (4) | 0.5081 (4) | 0.8637 (3) | 0.0545 (11) | |
H11A | 0.5893 | 0.5123 | 0.9234 | 0.065* | |
H11B | 0.5760 | 0.5811 | 0.8399 | 0.065* | |
C12 | 0.4528 (4) | 0.4711 (4) | 0.8563 (3) | 0.0520 (11) | |
C13 | 0.4936 (4) | 0.4961 (4) | 0.6254 (3) | 0.0512 (11) | |
C14 | 0.5700 (4) | 0.4428 (3) | 0.6726 (3) | 0.0435 (9) | |
C15 | 0.5739 (4) | 0.3234 (3) | 0.6518 (3) | 0.0460 (10) | |
H15 | 0.5314 | 0.2815 | 0.6937 | 0.055* | |
C16 | 0.5182 (4) | 0.3180 (4) | 0.5647 (3) | 0.0541 (11) | |
H16A | 0.4784 | 0.2497 | 0.5575 | 0.065* | |
H16B | 0.5718 | 0.3255 | 0.5192 | 0.065* | |
C17 | 0.4379 (4) | 0.4171 (4) | 0.5670 (3) | 0.0543 (11) | |
H17 | 0.4339 | 0.4494 | 0.5100 | 0.065* | |
C18 | 0.4620 (5) | 0.6132 (4) | 0.6271 (4) | 0.0724 (16) | |
H18A | 0.4053 | 0.6263 | 0.5857 | 0.109* | |
H18B | 0.5253 | 0.6574 | 0.6140 | 0.109* | |
H18C | 0.4351 | 0.6319 | 0.6827 | 0.109* | |
C19 | 0.8220 (4) | 0.5086 (4) | 0.9002 (3) | 0.0589 (12) | |
H19A | 0.8543 | 0.5446 | 0.8519 | 0.088* | |
H19B | 0.8792 | 0.4872 | 0.9391 | 0.088* | |
H19C | 0.7720 | 0.5577 | 0.9283 | 0.088* | |
C20 | 0.3226 (4) | 0.3867 (5) | 0.5954 (3) | 0.0637 (13) | |
C23A | 0.1478 (17) | 0.3371 (19) | 0.6006 (10) | 0.102 (5) | 0.526 (11) |
H23A | 0.0762 | 0.3248 | 0.5815 | 0.122* | 0.526 (11) |
O21A | 0.1807 (8) | 0.3242 (11) | 0.6807 (7) | 0.093 (3) | 0.526 (11) |
C21A | 0.2896 (10) | 0.3499 (14) | 0.6702 (9) | 0.100 (4) | 0.526 (11) |
H21A | 0.3394 | 0.3416 | 0.7148 | 0.120* | 0.526 (11) |
C22A | 0.2295 (15) | 0.3696 (18) | 0.5522 (14) | 0.133 (6) | 0.526 (11) |
H22A | 0.2232 | 0.3796 | 0.4937 | 0.160* | 0.526 (11) |
C23B | 0.1617 (18) | 0.3047 (14) | 0.6142 (12) | 0.082 (4) | 0.474 (11) |
H23B | 0.1102 | 0.2484 | 0.6166 | 0.098* | 0.474 (11) |
O21B | 0.1629 (12) | 0.3981 (15) | 0.6599 (11) | 0.130 (4) | 0.474 (11) |
C21B | 0.2716 (13) | 0.4394 (17) | 0.6579 (12) | 0.119 (6) | 0.474 (11) |
H21B | 0.3015 | 0.4928 | 0.6933 | 0.143* | 0.474 (11) |
C22B | 0.2502 (12) | 0.3112 (12) | 0.5652 (12) | 0.089 (4) | 0.474 (11) |
H22B | 0.2613 | 0.2696 | 0.5164 | 0.107* | 0.474 (11) |
C27A | 0.2691 (19) | 0.535 (3) | 0.826 (5) | 0.105 (12) | 0.39 (7) |
H27A | 0.2285 | 0.6022 | 0.8252 | 0.158* | 0.39 (7) |
H27B | 0.2335 | 0.4836 | 0.8630 | 0.158* | 0.39 (7) |
H27C | 0.2716 | 0.5051 | 0.7691 | 0.158* | 0.39 (7) |
C27B | 0.2683 (14) | 0.526 (2) | 0.874 (3) | 0.101 (7) | 0.61 (7) |
H27D | 0.2232 | 0.5907 | 0.8726 | 0.151* | 0.61 (7) |
H27E | 0.2636 | 0.4935 | 0.9298 | 0.151* | 0.61 (7) |
H27F | 0.2427 | 0.4749 | 0.8324 | 0.151* | 0.61 (7) |
C28 | 0.9466 (4) | 0.2068 (4) | 0.7628 (4) | 0.0643 (14) | |
C29 | 1.0287 (4) | 0.3406 (5) | 0.8603 (4) | 0.0705 (15) | |
H29A | 1.0491 | 0.3782 | 0.8090 | 0.106* | |
H29B | 1.0882 | 0.2939 | 0.8779 | 0.106* | |
H29C | 1.0137 | 0.3931 | 0.9043 | 0.106* | |
C30 | 0.7140 (5) | 0.5881 (4) | 0.7115 (3) | 0.0589 (13) | |
H30A | 0.6690 | 0.6372 | 0.7443 | 0.088* | |
H30B | 0.7103 | 0.6081 | 0.6525 | 0.088* | |
H30C | 0.7890 | 0.5926 | 0.7307 | 0.088* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.073 (3) | 0.123 (4) | 0.063 (2) | 0.012 (3) | 0.017 (2) | 0.022 (2) |
O6 | 0.0392 (15) | 0.072 (2) | 0.074 (2) | 0.0050 (17) | 0.0022 (16) | −0.0179 (19) |
O7 | 0.0451 (16) | 0.0459 (15) | 0.069 (2) | 0.0018 (14) | −0.0057 (16) | −0.0127 (16) |
O12 | 0.062 (2) | 0.0531 (19) | 0.115 (3) | −0.0067 (19) | 0.016 (2) | 0.013 (2) |
O27 | 0.0481 (19) | 0.0529 (19) | 0.151 (4) | 0.0083 (16) | 0.011 (3) | 0.001 (3) |
O28 | 0.062 (2) | 0.075 (3) | 0.140 (4) | 0.021 (2) | −0.001 (3) | −0.019 (3) |
C1 | 0.048 (2) | 0.069 (3) | 0.050 (3) | −0.004 (2) | −0.005 (2) | 0.005 (2) |
C2 | 0.063 (3) | 0.090 (4) | 0.080 (4) | 0.007 (3) | 0.003 (3) | 0.037 (3) |
C3 | 0.060 (3) | 0.076 (4) | 0.096 (4) | 0.007 (3) | −0.015 (3) | 0.032 (3) |
C4 | 0.039 (2) | 0.060 (3) | 0.071 (3) | 0.007 (2) | −0.004 (2) | 0.008 (2) |
C5 | 0.0322 (19) | 0.046 (2) | 0.053 (2) | 0.0010 (18) | −0.0033 (18) | 0.0026 (19) |
C6 | 0.039 (2) | 0.049 (2) | 0.063 (3) | 0.0015 (19) | 0.004 (2) | −0.007 (2) |
C7 | 0.044 (2) | 0.051 (2) | 0.045 (2) | −0.001 (2) | 0.0013 (19) | −0.0022 (19) |
C8 | 0.042 (2) | 0.039 (2) | 0.049 (2) | −0.0022 (18) | −0.0015 (19) | −0.0011 (18) |
C9 | 0.0343 (18) | 0.0388 (18) | 0.049 (2) | 0.0008 (17) | −0.0047 (17) | −0.0063 (17) |
C10 | 0.038 (2) | 0.046 (2) | 0.052 (2) | −0.0025 (19) | −0.0014 (19) | −0.002 (2) |
C11 | 0.051 (2) | 0.052 (2) | 0.061 (3) | 0.007 (2) | 0.004 (2) | −0.010 (2) |
C12 | 0.048 (2) | 0.049 (2) | 0.059 (3) | 0.004 (2) | 0.010 (2) | 0.008 (2) |
C13 | 0.051 (2) | 0.047 (2) | 0.055 (2) | 0.001 (2) | −0.007 (2) | 0.007 (2) |
C14 | 0.042 (2) | 0.0414 (19) | 0.047 (2) | 0.0003 (19) | −0.0052 (19) | 0.0003 (18) |
C15 | 0.044 (2) | 0.041 (2) | 0.053 (2) | 0.0004 (19) | −0.004 (2) | 0.0007 (19) |
C16 | 0.058 (3) | 0.054 (3) | 0.050 (2) | −0.005 (2) | −0.002 (2) | −0.005 (2) |
C17 | 0.051 (2) | 0.063 (3) | 0.048 (2) | −0.002 (2) | −0.008 (2) | 0.007 (2) |
C18 | 0.082 (4) | 0.053 (3) | 0.082 (4) | 0.012 (3) | −0.022 (3) | 0.011 (3) |
C19 | 0.053 (3) | 0.060 (3) | 0.063 (3) | −0.008 (3) | −0.007 (2) | −0.009 (2) |
C20 | 0.048 (3) | 0.084 (4) | 0.059 (3) | −0.001 (3) | −0.007 (2) | −0.013 (3) |
C23A | 0.061 (7) | 0.147 (10) | 0.098 (8) | −0.035 (8) | 0.005 (6) | −0.026 (8) |
O21A | 0.073 (5) | 0.113 (7) | 0.094 (6) | −0.016 (6) | 0.014 (5) | 0.004 (6) |
C21A | 0.062 (6) | 0.123 (10) | 0.115 (8) | 0.001 (7) | 0.001 (7) | 0.043 (8) |
C22A | 0.112 (10) | 0.179 (13) | 0.109 (9) | −0.015 (11) | −0.005 (9) | 0.016 (11) |
C23B | 0.075 (8) | 0.089 (8) | 0.081 (8) | −0.012 (7) | 0.017 (7) | 0.008 (7) |
O21B | 0.096 (7) | 0.145 (9) | 0.151 (8) | −0.018 (8) | 0.032 (7) | −0.026 (8) |
C21B | 0.077 (8) | 0.137 (12) | 0.143 (11) | −0.029 (10) | 0.034 (9) | −0.051 (11) |
C22B | 0.078 (8) | 0.068 (7) | 0.120 (10) | −0.020 (7) | 0.042 (7) | −0.032 (8) |
C27A | 0.033 (8) | 0.066 (11) | 0.22 (3) | 0.018 (7) | 0.027 (16) | 0.01 (2) |
C27B | 0.041 (6) | 0.101 (12) | 0.16 (2) | 0.002 (6) | 0.035 (9) | −0.009 (14) |
C28 | 0.032 (2) | 0.064 (3) | 0.097 (4) | 0.011 (2) | −0.006 (3) | −0.011 (3) |
C29 | 0.039 (2) | 0.087 (4) | 0.085 (4) | −0.001 (3) | −0.014 (3) | −0.002 (3) |
C30 | 0.063 (3) | 0.043 (2) | 0.071 (3) | −0.010 (2) | −0.005 (3) | 0.009 (2) |
O1—C1 | 1.220 (6) | C15—H15 | 0.9800 |
O6—C28 | 1.382 (7) | C16—C17 | 1.555 (7) |
O6—C6 | 1.464 (5) | C16—H16A | 0.9700 |
O7—C7 | 1.418 (5) | C16—H16B | 0.9700 |
O7—C15 | 1.439 (5) | C17—C20 | 1.513 (7) |
O12—C12 | 1.193 (6) | C17—H17 | 0.9800 |
O27—C12 | 1.328 (6) | C18—H18A | 0.9600 |
O27—C27B | 1.473 (11) | C18—H18B | 0.9600 |
O27—C27A | 1.492 (16) | C18—H18C | 0.9600 |
O28—C28 | 1.195 (6) | C19—H19A | 0.9600 |
C1—C2 | 1.463 (8) | C19—H19B | 0.9600 |
C1—C10 | 1.530 (7) | C19—H19C | 0.9600 |
C2—C3 | 1.339 (8) | C20—C21A | 1.320 (13) |
C2—H2 | 0.9300 | C20—C21B | 1.328 (14) |
C3—C4 | 1.488 (8) | C20—C22A | 1.333 (16) |
C3—H3 | 0.9300 | C20—C22B | 1.359 (13) |
C4—C28 | 1.518 (8) | C23A—C22A | 1.310 (16) |
C4—C5 | 1.521 (6) | C23A—O21A | 1.330 (13) |
C4—C29 | 1.552 (7) | C23A—H23A | 0.9300 |
C5—C6 | 1.480 (6) | O21A—C21A | 1.367 (13) |
C5—C10 | 1.522 (6) | C21A—H21A | 0.9300 |
C5—H5 | 0.9800 | C22A—H22A | 0.9300 |
C6—C7 | 1.518 (6) | C23B—C22B | 1.322 (16) |
C6—H6 | 0.9800 | C23B—O21B | 1.349 (14) |
C7—C8 | 1.565 (6) | C23B—H23B | 0.9300 |
C7—H7 | 0.9800 | O21B—C21B | 1.411 (15) |
C8—C14 | 1.502 (6) | C21B—H21B | 0.9300 |
C8—C30 | 1.533 (6) | C22B—H22B | 0.9300 |
C8—C9 | 1.587 (6) | C27A—H27A | 0.9600 |
C9—C11 | 1.540 (6) | C27A—H27B | 0.9600 |
C9—C10 | 1.562 (6) | C27A—H27C | 0.9600 |
C9—H9 | 0.9800 | C27B—H27D | 0.9600 |
C10—C19 | 1.537 (6) | C27B—H27E | 0.9600 |
C11—C12 | 1.492 (7) | C27B—H27F | 0.9600 |
C11—H11A | 0.9700 | C29—H29A | 0.9600 |
C11—H11B | 0.9700 | C29—H29B | 0.9600 |
C13—C14 | 1.353 (6) | C29—H29C | 0.9600 |
C13—C18 | 1.483 (6) | C30—H30A | 0.9600 |
C13—C17 | 1.492 (7) | C30—H30B | 0.9600 |
C14—C15 | 1.496 (6) | C30—H30C | 0.9600 |
C15—C16 | 1.527 (6) | ||
C28—O6—C6 | 109.2 (4) | C15—C16—H16A | 111.2 |
C7—O7—C15 | 107.3 (3) | C17—C16—H16A | 111.2 |
C12—O27—C27B | 114.1 (13) | C15—C16—H16B | 111.2 |
C12—O27—C27A | 117.0 (13) | C17—C16—H16B | 111.2 |
O1—C1—C2 | 118.9 (5) | H16A—C16—H16B | 109.1 |
O1—C1—C10 | 122.0 (5) | C13—C17—C20 | 113.3 (4) |
C2—C1—C10 | 119.0 (4) | C13—C17—C16 | 103.6 (4) |
C3—C2—C1 | 126.6 (5) | C20—C17—C16 | 113.1 (4) |
C3—C2—H2 | 116.7 | C13—C17—H17 | 108.9 |
C1—C2—H2 | 116.7 | C20—C17—H17 | 108.9 |
C2—C3—C4 | 119.3 (5) | C16—C17—H17 | 108.9 |
C2—C3—H3 | 120.4 | C13—C18—H18A | 109.5 |
C4—C3—H3 | 120.4 | C13—C18—H18B | 109.5 |
C3—C4—C28 | 118.9 (5) | H18A—C18—H18B | 109.5 |
C3—C4—C5 | 107.6 (4) | C13—C18—H18C | 109.5 |
C28—C4—C5 | 96.3 (4) | H18A—C18—H18C | 109.5 |
C3—C4—C29 | 110.3 (5) | H18B—C18—H18C | 109.5 |
C28—C4—C29 | 106.0 (4) | C10—C19—H19A | 109.5 |
C5—C4—C29 | 117.7 (4) | C10—C19—H19B | 109.5 |
C6—C5—C4 | 103.9 (4) | H19A—C19—H19B | 109.5 |
C6—C5—C10 | 120.0 (4) | C10—C19—H19C | 109.5 |
C4—C5—C10 | 119.9 (4) | H19A—C19—H19C | 109.5 |
C6—C5—H5 | 103.5 | H19B—C19—H19C | 109.5 |
C4—C5—H5 | 103.5 | C21A—C20—C22A | 98.3 (12) |
C10—C5—H5 | 103.5 | C21B—C20—C22B | 106.7 (10) |
O6—C6—C5 | 101.3 (4) | C21A—C20—C17 | 128.7 (7) |
O6—C6—C7 | 113.8 (4) | C21B—C20—C17 | 121.9 (8) |
C5—C6—C7 | 110.3 (4) | C22A—C20—C17 | 132.1 (11) |
O6—C6—H6 | 110.3 | C22B—C20—C17 | 131.3 (8) |
C5—C6—H6 | 110.3 | C22A—C23A—O21A | 111.1 (17) |
C7—C6—H6 | 110.3 | C22A—C23A—H23A | 124.5 |
O7—C7—C6 | 110.7 (4) | O21A—C23A—H23A | 124.5 |
O7—C7—C8 | 108.1 (3) | C23A—O21A—C21A | 98.5 (13) |
C6—C7—C8 | 111.0 (3) | C20—C21A—O21A | 118.6 (12) |
O7—C7—H7 | 109.0 | C20—C21A—H21A | 120.7 |
C6—C7—H7 | 109.0 | O21A—C21A—H21A | 120.7 |
C8—C7—H7 | 109.0 | C23A—C22A—C20 | 113.0 (17) |
C14—C8—C30 | 115.2 (4) | C23A—C22A—H22A | 123.5 |
C14—C8—C7 | 95.0 (3) | C20—C22A—H22A | 123.5 |
C30—C8—C7 | 109.3 (4) | C22B—C23B—O21B | 104.5 (17) |
C14—C8—C9 | 107.7 (3) | C22B—C23B—H23B | 127.7 |
C30—C8—C9 | 115.9 (4) | O21B—C23B—H23B | 127.7 |
C7—C8—C9 | 111.8 (3) | C23B—O21B—C21B | 107.5 (16) |
C11—C9—C10 | 114.4 (3) | C20—C21B—O21B | 106.1 (12) |
C11—C9—C8 | 111.0 (4) | C20—C21B—H21B | 127.0 |
C10—C9—C8 | 115.5 (3) | O21B—C21B—H21B | 127.0 |
C11—C9—H9 | 104.9 | C23B—C22B—C20 | 111.1 (15) |
C10—C9—H9 | 104.9 | C23B—C22B—H22B | 124.4 |
C8—C9—H9 | 104.9 | C20—C22B—H22B | 124.4 |
C5—C10—C1 | 104.2 (4) | O27—C27A—H27A | 109.5 |
C5—C10—C19 | 116.2 (4) | O27—C27A—H27B | 109.5 |
C1—C10—C19 | 106.4 (4) | H27A—C27A—H27B | 109.5 |
C5—C10—C9 | 102.7 (3) | O27—C27A—H27C | 109.5 |
C1—C10—C9 | 112.9 (4) | H27A—C27A—H27C | 109.5 |
C19—C10—C9 | 114.2 (4) | H27B—C27A—H27C | 109.5 |
C12—C11—C9 | 113.4 (4) | O27—C27B—H27D | 109.5 |
C12—C11—H11A | 108.9 | O27—C27B—H27E | 109.5 |
C9—C11—H11A | 108.9 | H27D—C27B—H27E | 109.5 |
C12—C11—H11B | 108.9 | O27—C27B—H27F | 109.5 |
C9—C11—H11B | 108.9 | H27D—C27B—H27F | 109.5 |
H11A—C11—H11B | 107.7 | H27E—C27B—H27F | 109.5 |
O12—C12—O27 | 123.5 (5) | O28—C28—O6 | 121.1 (6) |
O12—C12—C11 | 125.2 (5) | O28—C28—C4 | 129.9 (6) |
O27—C12—C11 | 111.2 (4) | O6—C28—C4 | 108.8 (4) |
C14—C13—C18 | 129.2 (5) | C4—C29—H29A | 109.5 |
C14—C13—C17 | 109.6 (4) | C4—C29—H29B | 109.5 |
C18—C13—C17 | 121.3 (4) | H29A—C29—H29B | 109.5 |
C13—C14—C15 | 111.8 (4) | C4—C29—H29C | 109.5 |
C13—C14—C8 | 137.7 (4) | H29A—C29—H29C | 109.5 |
C15—C14—C8 | 108.1 (4) | H29B—C29—H29C | 109.5 |
O7—C15—C14 | 105.5 (4) | C8—C30—H30A | 109.5 |
O7—C15—C16 | 117.0 (4) | C8—C30—H30B | 109.5 |
C14—C15—C16 | 103.0 (4) | H30A—C30—H30B | 109.5 |
O7—C15—H15 | 110.3 | C8—C30—H30C | 109.5 |
C14—C15—H15 | 110.3 | H30A—C30—H30C | 109.5 |
C16—C15—H15 | 110.3 | H30B—C30—H30C | 109.5 |
C15—C16—C17 | 102.8 (4) | ||
O1—C1—C2—C3 | 179.8 (7) | C27B—O27—C12—C11 | −163 (2) |
C10—C1—C2—C3 | −2.4 (9) | C27A—O27—C12—C11 | 164 (3) |
C1—C2—C3—C4 | 3.2 (10) | C9—C11—C12—O12 | 34.1 (8) |
C2—C3—C4—C28 | −134.2 (6) | C9—C11—C12—O27 | −148.8 (5) |
C2—C3—C4—C5 | −26.3 (8) | C18—C13—C14—C15 | 178.7 (5) |
C2—C3—C4—C29 | 103.1 (6) | C17—C13—C14—C15 | −0.3 (6) |
C3—C4—C5—C6 | −166.9 (4) | C18—C13—C14—C8 | −21.8 (10) |
C28—C4—C5—C6 | −43.8 (4) | C17—C13—C14—C8 | 159.1 (5) |
C29—C4—C5—C6 | 67.9 (5) | C30—C8—C14—C13 | −9.9 (8) |
C3—C4—C5—C10 | 55.6 (6) | C7—C8—C14—C13 | −124.0 (6) |
C28—C4—C5—C10 | 178.6 (4) | C9—C8—C14—C13 | 121.2 (6) |
C29—C4—C5—C10 | −69.6 (6) | C30—C8—C14—C15 | 150.0 (4) |
C28—O6—C6—C5 | −19.6 (4) | C7—C8—C14—C15 | 35.9 (4) |
C28—O6—C6—C7 | −138.0 (4) | C9—C8—C14—C15 | −78.9 (4) |
C4—C5—C6—O6 | 40.4 (4) | C7—O7—C15—C14 | −2.8 (5) |
C10—C5—C6—O6 | 177.9 (4) | C7—O7—C15—C16 | 110.9 (4) |
C4—C5—C6—C7 | 161.4 (4) | C13—C14—C15—O7 | 142.2 (4) |
C10—C5—C6—C7 | −61.2 (5) | C8—C14—C15—O7 | −23.4 (5) |
C15—O7—C7—C6 | 148.7 (4) | C13—C14—C15—C16 | 19.1 (5) |
C15—O7—C7—C8 | 27.0 (5) | C8—C14—C15—C16 | −146.5 (4) |
O6—C6—C7—O7 | 44.2 (5) | O7—C15—C16—C17 | −143.7 (4) |
C5—C6—C7—O7 | −68.9 (5) | C14—C15—C16—C17 | −28.6 (5) |
O6—C6—C7—C8 | 164.2 (3) | C14—C13—C17—C20 | 104.7 (5) |
C5—C6—C7—C8 | 51.1 (5) | C18—C13—C17—C20 | −74.4 (6) |
O7—C7—C8—C14 | −38.3 (4) | C14—C13—C17—C16 | −18.3 (5) |
C6—C7—C8—C14 | −159.9 (4) | C18—C13—C17—C16 | 162.6 (5) |
O7—C7—C8—C30 | −157.3 (4) | C15—C16—C17—C13 | 28.8 (5) |
C6—C7—C8—C30 | 81.2 (5) | C15—C16—C17—C20 | −94.3 (5) |
O7—C7—C8—C9 | 73.1 (4) | C13—C17—C20—C21A | −52.4 (12) |
C6—C7—C8—C9 | −48.5 (5) | C16—C17—C20—C21A | 65.2 (12) |
C14—C8—C9—C11 | −73.1 (4) | C13—C17—C20—C21B | 10.3 (13) |
C30—C8—C9—C11 | 57.7 (5) | C16—C17—C20—C21B | 127.9 (13) |
C7—C8—C9—C11 | −176.2 (3) | C13—C17—C20—C22A | 141.2 (14) |
C14—C8—C9—C10 | 154.7 (3) | C16—C17—C20—C22A | −101.2 (14) |
C30—C8—C9—C10 | −74.6 (5) | C13—C17—C20—C22B | −172.9 (12) |
C7—C8—C9—C10 | 51.5 (5) | C16—C17—C20—C22B | −55.3 (13) |
C6—C5—C10—C1 | 176.0 (4) | C22A—C23A—O21A—C21A | −2 (2) |
C4—C5—C10—C1 | −53.2 (5) | C22A—C20—C21A—O21A | −8.1 (15) |
C6—C5—C10—C19 | −67.3 (5) | C17—C20—C21A—O21A | −177.9 (10) |
C4—C5—C10—C19 | 63.4 (5) | C23A—O21A—C21A—C20 | 7 (2) |
C6—C5—C10—C9 | 58.1 (5) | O21A—C23A—C22A—C20 | −3 (3) |
C4—C5—C10—C9 | −171.1 (4) | C21A—C20—C22A—C23A | 6.4 (17) |
O1—C1—C10—C5 | −157.9 (5) | C17—C20—C22A—C23A | 175.7 (13) |
C2—C1—C10—C5 | 24.3 (6) | C22B—C23B—O21B—C21B | −20 (2) |
O1—C1—C10—C19 | 78.8 (6) | C22B—C20—C21B—O21B | −4.2 (16) |
C2—C1—C10—C19 | −99.0 (5) | C17—C20—C21B—O21B | 173.3 (11) |
O1—C1—C10—C9 | −47.2 (6) | C23B—O21B—C21B—C20 | 15 (2) |
C2—C1—C10—C9 | 135.0 (5) | O21B—C23B—C22B—C20 | 18 (2) |
C11—C9—C10—C5 | 178.4 (4) | C21B—C20—C22B—C23B | −8.7 (16) |
C8—C9—C10—C5 | −51.0 (4) | C17—C20—C22B—C23B | 174.1 (11) |
C11—C9—C10—C1 | 66.8 (5) | C6—O6—C28—O28 | 176.0 (4) |
C8—C9—C10—C1 | −162.6 (4) | C6—O6—C28—C4 | −8.9 (5) |
C11—C9—C10—C19 | −54.9 (5) | C3—C4—C28—O28 | −39.2 (8) |
C8—C9—C10—C19 | 75.8 (5) | C5—C4—C28—O28 | −153.3 (5) |
C10—C9—C11—C12 | −136.0 (4) | C29—C4—C28—O28 | 85.6 (7) |
C8—C9—C11—C12 | 91.1 (5) | C3—C4—C28—O6 | 146.3 (5) |
C27B—O27—C12—O12 | 14 (2) | C5—C4—C28—O6 | 32.3 (4) |
C27A—O27—C12—O12 | −19 (3) | C29—C4—C28—O6 | −88.9 (4) |
C27H30O7 | Dx = 1.325 Mg m−3 |
Mr = 466.51 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, P212121 | Cell parameters from 25 reflections |
a = 9.026 (2) Å | θ = 5–12° |
b = 14.009 (18) Å | µ = 0.10 mm−1 |
c = 18.495 (5) Å | T = 293 K |
V = 2339 (3) Å3 | Rod, colourless |
Z = 4 | 0.40 × 0.25 × 0.20 mm |
F(000) = 992 |
Enraf-Nonius CAD-4 diffractometer | Rint = 0.019 |
Radiation source: fine-focus sealed tube | θmax = 30.6°, θmin = 2.2° |
Graphite monochromator | h = 0→12 |
non–profiled ω/2θ scans | k = 0→19 |
3895 measured reflections | l = 0→26 |
3864 independent reflections | 3 standard reflections every 200 reflections |
1434 reflections with I > 2σ(I) | intensity decay: 3% |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full with fixed elements per cycle | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.066 | H-atom parameters constrained |
wR(F2) = 0.198 | w = 1/[σ2(Fo2) + (0.0844P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.98 | (Δ/σ)max = 0.001 |
3864 reflections | Δρmax = 0.23 e Å−3 |
308 parameters | Δρmin = −0.23 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.015 (2) |
C27H30O7 | V = 2339 (3) Å3 |
Mr = 466.51 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 9.026 (2) Å | µ = 0.10 mm−1 |
b = 14.009 (18) Å | T = 293 K |
c = 18.495 (5) Å | 0.40 × 0.25 × 0.20 mm |
Enraf-Nonius CAD-4 diffractometer | Rint = 0.019 |
3895 measured reflections | 3 standard reflections every 200 reflections |
3864 independent reflections | intensity decay: 3% |
1434 reflections with I > 2σ(I) |
R[F2 > 2σ(F2)] = 0.066 | 0 restraints |
wR(F2) = 0.198 | H-atom parameters constrained |
S = 0.98 | Δρmax = 0.23 e Å−3 |
3864 reflections | Δρmin = −0.23 e Å−3 |
308 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.6506 (6) | 0.0539 (4) | 0.2753 (3) | 0.0511 (14) | |
C2 | 0.6964 (7) | 0.0524 (4) | 0.3517 (3) | 0.0575 (16) | |
H2 | 0.7372 | −0.0040 | 0.3693 | 0.069* | |
C3 | 0.6839 (7) | 0.1261 (4) | 0.3983 (3) | 0.0557 (15) | |
H3 | 0.7197 | 0.1208 | 0.4453 | 0.067* | |
C4 | 0.6124 (7) | 0.2157 (4) | 0.3736 (3) | 0.0492 (14) | |
C5 | 0.6326 (6) | 0.2219 (3) | 0.2923 (2) | 0.0392 (12) | |
H5 | 0.7405 | 0.2196 | 0.2866 | 0.047* | |
C6 | 0.5963 (7) | 0.3239 (3) | 0.2751 (2) | 0.0436 (13) | |
H6 | 0.4887 | 0.3337 | 0.2747 | 0.052* | |
C7 | 0.6613 (6) | 0.3497 (3) | 0.2035 (3) | 0.0454 (13) | |
H7 | 0.6256 | 0.4129 | 0.1889 | 0.054* | |
C8 | 0.6250 (6) | 0.2757 (3) | 0.1430 (2) | 0.0431 (13) | |
C9 | 0.6489 (6) | 0.1696 (3) | 0.1678 (3) | 0.0449 (13) | |
H9 | 0.7561 | 0.1633 | 0.1746 | 0.054* | |
C10 | 0.5795 (6) | 0.1434 (4) | 0.2431 (3) | 0.0453 (13) | |
C11 | 0.6101 (7) | 0.0986 (4) | 0.1061 (3) | 0.0616 (17) | |
H11A | 0.5157 | 0.0691 | 0.1177 | 0.074* | |
H11B | 0.5964 | 0.1350 | 0.0620 | 0.074* | |
C12 | 0.7183 (9) | 0.0214 (5) | 0.0912 (3) | 0.069 (2) | |
C15 | 0.7206 (8) | 0.3623 (4) | 0.0217 (3) | 0.0624 (17) | |
H13A | 0.7745 | 0.3396 | −0.0202 | 0.075* | |
H13B | 0.6156 | 0.3631 | 0.0107 | 0.075* | |
C14 | 0.7524 (7) | 0.2996 (4) | 0.0881 (3) | 0.0492 (14) | |
H14 | 0.7986 | 0.2399 | 0.0721 | 0.059* | |
C13 | 0.8669 (6) | 0.3577 (4) | 0.1334 (3) | 0.0477 (13) | |
C17 | 0.8515 (6) | 0.4584 (4) | 0.1046 (3) | 0.0483 (13) | |
C16 | 0.7733 (7) | 0.4593 (4) | 0.0440 (3) | 0.0591 (16) | |
H17 | 0.7532 | 0.5146 | 0.0179 | 0.071* | |
C19 | 0.4102 (7) | 0.1268 (5) | 0.2428 (4) | 0.0654 (17) | |
H19A | 0.3618 | 0.1807 | 0.2211 | 0.098* | |
H19B | 0.3759 | 0.1190 | 0.2915 | 0.098* | |
H19C | 0.3880 | 0.0703 | 0.2154 | 0.098* | |
C20 | 0.9101 (6) | 0.5411 (4) | 0.1430 (3) | 0.0521 (15) | |
C21 | 0.9596 (7) | 0.5456 (4) | 0.2124 (3) | 0.0605 (16) | |
H21 | 0.9678 | 0.4930 | 0.2428 | 0.073* | |
C22 | 0.9188 (7) | 0.6382 (4) | 0.1174 (3) | 0.0566 (15) | |
H22 | 0.8951 | 0.6597 | 0.0712 | 0.068* | |
C23 | 0.9674 (7) | 0.6912 (4) | 0.1725 (4) | 0.0692 (18) | |
H23 | 0.9803 | 0.7570 | 0.1707 | 0.083* | |
C27 | 0.9682 (9) | −0.0301 (6) | 0.0908 (4) | 0.096 (2) | |
H27A | 1.0638 | −0.0068 | 0.1053 | 0.144* | |
H27B | 0.9693 | −0.0439 | 0.0400 | 0.144* | |
H27C | 0.9454 | −0.0872 | 0.1173 | 0.144* | |
C28 | 0.6828 (7) | 0.3113 (4) | 0.3930 (3) | 0.0531 (15) | |
C29 | 0.4535 (7) | 0.2206 (4) | 0.4051 (3) | 0.0668 (18) | |
H29A | 0.4027 | 0.1618 | 0.3954 | 0.100* | |
H29B | 0.4007 | 0.2725 | 0.3831 | 0.100* | |
H29C | 0.4586 | 0.2306 | 0.4564 | 0.100* | |
C30 | 0.4696 (7) | 0.2979 (5) | 0.1143 (3) | 0.0609 (16) | |
H30A | 0.4441 | 0.2529 | 0.0772 | 0.091* | |
H30B | 0.4679 | 0.3613 | 0.0946 | 0.091* | |
H30C | 0.3993 | 0.2935 | 0.1531 | 0.091* | |
C18 | 1.0245 (7) | 0.3206 (4) | 0.1310 (3) | 0.0647 (18) | |
H31A | 1.0863 | 0.3596 | 0.1612 | 0.097* | |
H31B | 1.0603 | 0.3229 | 0.0821 | 0.097* | |
H31C | 1.0267 | 0.2559 | 0.1481 | 0.097* | |
O1 | 0.6672 (5) | −0.0196 (3) | 0.2390 (2) | 0.0720 (12) | |
O12 | 0.6786 (8) | −0.0550 (4) | 0.0648 (3) | 0.114 (2) | |
O7 | 0.8194 (4) | 0.3509 (2) | 0.20789 (16) | 0.0462 (9) | |
O6 | 0.6638 (4) | 0.3739 (2) | 0.33638 (17) | 0.0521 (10) | |
O21 | 0.9957 (5) | 0.6362 (3) | 0.2319 (2) | 0.0701 (12) | |
O27 | 0.8561 (5) | 0.0424 (3) | 0.1059 (2) | 0.0744 (13) | |
O28 | 0.7461 (6) | 0.3362 (3) | 0.44667 (19) | 0.0703 (13) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.050 (3) | 0.031 (3) | 0.072 (4) | −0.006 (3) | 0.010 (3) | 0.004 (3) |
C2 | 0.059 (4) | 0.038 (3) | 0.075 (4) | 0.003 (3) | 0.008 (3) | 0.015 (3) |
C3 | 0.074 (4) | 0.047 (3) | 0.047 (3) | −0.006 (3) | 0.005 (3) | 0.010 (3) |
C4 | 0.066 (4) | 0.038 (3) | 0.043 (3) | 0.001 (3) | 0.010 (3) | 0.002 (2) |
C5 | 0.047 (3) | 0.024 (2) | 0.047 (3) | 0.000 (2) | 0.008 (3) | 0.001 (2) |
C6 | 0.051 (3) | 0.037 (3) | 0.043 (3) | 0.005 (2) | 0.004 (3) | −0.006 (2) |
C7 | 0.055 (4) | 0.029 (3) | 0.052 (3) | 0.004 (3) | 0.003 (3) | −0.001 (2) |
C8 | 0.054 (3) | 0.036 (3) | 0.039 (3) | 0.004 (3) | 0.000 (3) | −0.002 (2) |
C9 | 0.048 (3) | 0.034 (3) | 0.052 (3) | −0.007 (3) | 0.006 (3) | −0.005 (2) |
C10 | 0.050 (3) | 0.037 (3) | 0.048 (3) | 0.000 (3) | 0.006 (3) | 0.000 (3) |
C11 | 0.070 (4) | 0.047 (3) | 0.067 (4) | −0.004 (3) | 0.001 (3) | −0.023 (3) |
C12 | 0.095 (6) | 0.051 (4) | 0.061 (4) | 0.000 (4) | 0.007 (4) | −0.020 (3) |
C15 | 0.089 (5) | 0.055 (3) | 0.043 (3) | 0.001 (4) | −0.001 (3) | −0.004 (3) |
C14 | 0.074 (4) | 0.035 (3) | 0.039 (3) | 0.004 (3) | 0.002 (3) | −0.006 (2) |
C13 | 0.054 (4) | 0.051 (3) | 0.037 (3) | 0.005 (3) | 0.009 (3) | 0.005 (2) |
C17 | 0.064 (4) | 0.045 (3) | 0.036 (3) | −0.004 (3) | 0.011 (3) | 0.007 (2) |
C16 | 0.077 (4) | 0.050 (3) | 0.050 (3) | 0.000 (3) | 0.006 (3) | 0.013 (3) |
C19 | 0.055 (4) | 0.062 (4) | 0.079 (4) | −0.006 (3) | 0.000 (3) | −0.002 (4) |
C20 | 0.055 (3) | 0.044 (3) | 0.057 (3) | −0.001 (3) | 0.009 (3) | 0.007 (3) |
C21 | 0.080 (4) | 0.038 (3) | 0.064 (4) | −0.002 (3) | −0.004 (4) | 0.003 (3) |
C22 | 0.059 (4) | 0.051 (3) | 0.060 (3) | −0.005 (3) | −0.004 (3) | 0.011 (3) |
C23 | 0.068 (5) | 0.043 (3) | 0.096 (5) | −0.001 (3) | −0.015 (4) | 0.015 (4) |
C27 | 0.102 (6) | 0.088 (5) | 0.098 (5) | 0.041 (5) | 0.018 (5) | −0.007 (5) |
C28 | 0.066 (4) | 0.051 (3) | 0.042 (3) | 0.003 (3) | 0.011 (3) | −0.005 (3) |
C29 | 0.070 (4) | 0.058 (4) | 0.072 (4) | −0.001 (3) | 0.023 (4) | 0.009 (3) |
C30 | 0.062 (4) | 0.060 (4) | 0.061 (4) | 0.006 (3) | −0.014 (3) | −0.007 (3) |
C18 | 0.069 (4) | 0.057 (4) | 0.069 (4) | 0.001 (3) | 0.013 (4) | 0.004 (3) |
O1 | 0.098 (3) | 0.0340 (19) | 0.084 (3) | 0.000 (2) | 0.001 (3) | −0.005 (2) |
O12 | 0.149 (5) | 0.068 (3) | 0.124 (4) | −0.021 (4) | 0.023 (4) | −0.048 (3) |
O7 | 0.057 (2) | 0.0403 (19) | 0.0414 (19) | −0.0050 (19) | 0.0057 (18) | 0.0045 (16) |
O6 | 0.077 (3) | 0.0366 (18) | 0.0422 (18) | −0.003 (2) | 0.005 (2) | −0.0057 (16) |
O21 | 0.082 (3) | 0.046 (2) | 0.082 (3) | −0.005 (2) | −0.012 (3) | −0.001 (2) |
O27 | 0.070 (3) | 0.062 (3) | 0.092 (3) | 0.007 (3) | 0.003 (3) | −0.019 (2) |
O28 | 0.106 (4) | 0.061 (3) | 0.044 (2) | −0.006 (3) | −0.004 (2) | −0.0069 (19) |
C1—O1 | 1.239 (7) | C14—C13 | 1.559 (8) |
C1—C2 | 1.472 (9) | C14—H14 | 0.9800 |
C1—C10 | 1.530 (8) | C13—O7 | 1.446 (6) |
C2—C3 | 1.350 (8) | C13—C18 | 1.514 (8) |
C2—H2 | 0.9300 | C13—C17 | 1.515 (8) |
C3—C4 | 1.483 (8) | C17—C16 | 1.324 (8) |
C3—H3 | 0.9300 | C17—C20 | 1.458 (8) |
C4—C5 | 1.516 (7) | C16—H17 | 0.9300 |
C4—C28 | 1.524 (8) | C19—H19A | 0.9600 |
C4—C29 | 1.550 (9) | C19—H19B | 0.9600 |
C5—C6 | 1.501 (7) | C19—H19C | 0.9600 |
C5—C10 | 1.506 (7) | C20—C21 | 1.359 (8) |
C5—H5 | 0.9800 | C20—C22 | 1.443 (8) |
C6—O6 | 1.466 (6) | C21—O21 | 1.360 (7) |
C6—C7 | 1.492 (7) | C21—H21 | 0.9300 |
C6—H6 | 0.9800 | C22—C23 | 1.335 (9) |
C7—O7 | 1.429 (7) | C22—H22 | 0.9300 |
C7—C8 | 1.559 (7) | C23—O21 | 1.366 (8) |
C7—H7 | 0.9800 | C23—H23 | 0.9300 |
C8—C30 | 1.532 (8) | C27—O27 | 1.460 (8) |
C8—C9 | 1.571 (7) | C27—H27A | 0.9600 |
C8—C14 | 1.570 (8) | C27—H27B | 0.9600 |
C9—C11 | 1.554 (7) | C27—H27C | 0.9600 |
C9—C10 | 1.569 (7) | C28—O28 | 1.198 (7) |
C9—H9 | 0.9800 | C28—O6 | 1.377 (6) |
C10—C19 | 1.545 (8) | C29—H29A | 0.9600 |
C11—C12 | 1.483 (9) | C29—H29B | 0.9600 |
C11—H11A | 0.9700 | C29—H29C | 0.9600 |
C11—H11B | 0.9700 | C30—H30A | 0.9600 |
C12—O12 | 1.230 (8) | C30—H30B | 0.9600 |
C12—O27 | 1.307 (8) | C30—H30C | 0.9600 |
C15—C16 | 1.497 (8) | C18—H31A | 0.9600 |
C15—C14 | 1.537 (8) | C18—H31B | 0.9600 |
C15—H13A | 0.9700 | C18—H31C | 0.9600 |
C15—H13B | 0.9700 | ||
O1—C1—C2 | 118.4 (5) | C15—C14—C8 | 120.1 (5) |
O1—C1—C10 | 121.4 (5) | C13—C14—C8 | 104.4 (4) |
C2—C1—C10 | 120.2 (5) | C15—C14—H14 | 109.0 |
C3—C2—C1 | 125.4 (6) | C13—C14—H14 | 109.0 |
C3—C2—H2 | 117.3 | C8—C14—H14 | 109.0 |
C1—C2—H2 | 117.3 | O7—C13—C18 | 106.5 (5) |
C2—C3—C4 | 119.1 (5) | O7—C13—C17 | 111.7 (4) |
C2—C3—H3 | 120.4 | C18—C13—C17 | 113.3 (5) |
C4—C3—H3 | 120.4 | O7—C13—C14 | 106.3 (4) |
C3—C4—C5 | 107.6 (5) | C18—C13—C14 | 115.3 (5) |
C3—C4—C28 | 119.3 (5) | C17—C13—C14 | 103.7 (4) |
C5—C4—C28 | 97.6 (4) | C16—C17—C20 | 126.8 (5) |
C3—C4—C29 | 108.9 (5) | C16—C17—C13 | 110.8 (5) |
C5—C4—C29 | 118.8 (5) | C20—C17—C13 | 122.3 (5) |
C28—C4—C29 | 105.0 (5) | C17—C16—C15 | 113.2 (5) |
C6—C5—C4 | 103.8 (4) | C17—C16—H17 | 123.4 |
C6—C5—C10 | 119.8 (4) | C15—C16—H17 | 123.4 |
C4—C5—C10 | 121.3 (4) | C10—C19—H19A | 109.5 |
C6—C5—H5 | 103.0 | C10—C19—H19B | 109.5 |
C4—C5—H5 | 103.0 | H19A—C19—H19B | 109.5 |
C10—C5—H5 | 103.0 | C10—C19—H19C | 109.5 |
O6—C6—C7 | 114.1 (4) | H19A—C19—H19C | 109.5 |
O6—C6—C5 | 101.5 (4) | H19B—C19—H19C | 109.5 |
C7—C6—C5 | 109.4 (4) | C21—C20—C22 | 104.4 (6) |
O6—C6—H6 | 110.5 | C21—C20—C17 | 128.0 (6) |
C7—C6—H6 | 110.5 | C22—C20—C17 | 127.4 (5) |
C5—C6—H6 | 110.5 | O21—C21—C20 | 111.9 (6) |
O7—C7—C6 | 110.2 (5) | O21—C21—H21 | 124.1 |
O7—C7—C8 | 105.0 (4) | C20—C21—H21 | 124.1 |
C6—C7—C8 | 113.2 (4) | C23—C22—C20 | 106.9 (6) |
O7—C7—H7 | 109.5 | C23—C22—H22 | 126.5 |
C6—C7—H7 | 109.5 | C20—C22—H22 | 126.5 |
C8—C7—H7 | 109.5 | C22—C23—O21 | 111.2 (6) |
C30—C8—C9 | 114.8 (5) | C22—C23—H23 | 124.4 |
C30—C8—C7 | 107.8 (5) | O21—C23—H23 | 124.4 |
C9—C8—C7 | 112.9 (4) | O27—C27—H27A | 109.5 |
C30—C8—C14 | 113.8 (4) | O27—C27—H27B | 109.5 |
C9—C8—C14 | 106.9 (4) | H27A—C27—H27B | 109.5 |
C7—C8—C14 | 99.7 (4) | O27—C27—H27C | 109.5 |
C11—C9—C8 | 111.1 (4) | H27A—C27—H27C | 109.5 |
C11—C9—C10 | 114.3 (4) | H27B—C27—H27C | 109.5 |
C8—C9—C10 | 115.2 (4) | O28—C28—O6 | 120.2 (5) |
C11—C9—H9 | 105.0 | O28—C28—C4 | 130.6 (5) |
C8—C9—H9 | 105.0 | O6—C28—C4 | 109.2 (5) |
C10—C9—H9 | 105.0 | C4—C29—H29A | 109.5 |
C5—C10—C1 | 103.2 (4) | C4—C29—H29B | 109.5 |
C5—C10—C19 | 115.3 (5) | H29A—C29—H29B | 109.5 |
C1—C10—C19 | 107.0 (5) | C4—C29—H29C | 109.5 |
C5—C10—C9 | 103.8 (4) | H29A—C29—H29C | 109.5 |
C1—C10—C9 | 111.7 (4) | H29B—C29—H29C | 109.5 |
C19—C10—C9 | 115.3 (5) | C8—C30—H30A | 109.5 |
C12—C11—C9 | 117.1 (6) | C8—C30—H30B | 109.5 |
C12—C11—H11A | 108.0 | H30A—C30—H30B | 109.5 |
C9—C11—H11A | 108.0 | C8—C30—H30C | 109.5 |
C12—C11—H11B | 108.0 | H30A—C30—H30C | 109.5 |
C9—C11—H11B | 108.0 | H30B—C30—H30C | 109.5 |
H11A—C11—H11B | 107.3 | C13—C18—H31A | 109.5 |
O12—C12—O27 | 123.8 (7) | C13—C18—H31B | 109.5 |
O12—C12—C11 | 121.1 (7) | H31A—C18—H31B | 109.5 |
O27—C12—C11 | 115.1 (6) | C13—C18—H31C | 109.5 |
C16—C15—C14 | 103.9 (5) | H31A—C18—H31C | 109.5 |
C16—C15—H13A | 111.0 | H31B—C18—H31C | 109.5 |
C14—C15—H13A | 111.0 | C7—O7—C13 | 104.1 (4) |
C16—C15—H13B | 111.0 | C28—O6—C6 | 109.6 (4) |
C14—C15—H13B | 111.0 | C21—O21—C23 | 105.5 (5) |
H13A—C15—H13B | 109.0 | C12—O27—C27 | 117.7 (6) |
C15—C14—C13 | 104.7 (4) | ||
O1—C1—C2—C3 | −179.2 (6) | C9—C11—C12—O27 | −29.0 (9) |
C10—C1—C2—C3 | −1.3 (9) | C16—C15—C14—C13 | −18.0 (6) |
C1—C2—C3—C4 | 3.1 (10) | C16—C15—C14—C8 | 98.7 (6) |
C2—C3—C4—C5 | −26.4 (8) | C30—C8—C14—C15 | 14.5 (7) |
C2—C3—C4—C28 | −136.1 (6) | C9—C8—C14—C15 | 142.3 (5) |
C2—C3—C4—C29 | 103.5 (6) | C7—C8—C14—C15 | −100.0 (5) |
C3—C4—C5—C6 | −165.0 (5) | C30—C8—C14—C13 | 131.5 (5) |
C28—C4—C5—C6 | −40.9 (6) | C9—C8—C14—C13 | −100.8 (5) |
C29—C4—C5—C6 | 70.8 (6) | C7—C8—C14—C13 | 16.9 (5) |
C3—C4—C5—C10 | 56.5 (7) | C15—C14—C13—O7 | 136.3 (5) |
C28—C4—C5—C10 | −179.4 (5) | C8—C14—C13—O7 | 9.3 (6) |
C29—C4—C5—C10 | −67.6 (7) | C15—C14—C13—C18 | −105.9 (6) |
C4—C5—C6—O6 | 39.2 (5) | C8—C14—C13—C18 | 127.1 (5) |
C10—C5—C6—O6 | 178.5 (5) | C15—C14—C13—C17 | 18.5 (6) |
C4—C5—C6—C7 | 160.0 (5) | C8—C14—C13—C17 | −108.6 (4) |
C10—C5—C6—C7 | −60.7 (7) | O7—C13—C17—C16 | −126.5 (5) |
O6—C6—C7—O7 | 45.1 (6) | C18—C13—C17—C16 | 113.2 (6) |
C5—C6—C7—O7 | −67.8 (5) | C14—C13—C17—C16 | −12.5 (6) |
O6—C6—C7—C8 | 162.2 (4) | O7—C13—C17—C20 | 50.3 (7) |
C5—C6—C7—C8 | 49.3 (6) | C18—C13—C17—C20 | −70.0 (7) |
O7—C7—C8—C30 | −158.0 (5) | C14—C13—C17—C20 | 164.3 (5) |
C6—C7—C8—C30 | 81.8 (6) | C20—C17—C16—C15 | −175.7 (6) |
O7—C7—C8—C9 | 74.2 (6) | C13—C17—C16—C15 | 0.9 (7) |
C6—C7—C8—C9 | −46.1 (7) | C14—C15—C16—C17 | 11.3 (7) |
O7—C7—C8—C14 | −38.9 (5) | C16—C17—C20—C21 | 163.2 (7) |
C6—C7—C8—C14 | −159.1 (5) | C13—C17—C20—C21 | −13.0 (10) |
C30—C8—C9—C11 | 55.3 (6) | C16—C17—C20—C22 | −12.1 (10) |
C7—C8—C9—C11 | 179.5 (5) | C13—C17—C20—C22 | 171.7 (6) |
C14—C8—C9—C11 | −71.9 (6) | C22—C20—C21—O21 | 0.9 (7) |
C30—C8—C9—C10 | −76.7 (6) | C17—C20—C21—O21 | −175.2 (6) |
C7—C8—C9—C10 | 47.5 (7) | C21—C20—C22—C23 | −1.6 (7) |
C14—C8—C9—C10 | 156.1 (4) | C17—C20—C22—C23 | 174.5 (6) |
C6—C5—C10—C1 | 175.0 (5) | C20—C22—C23—O21 | 1.8 (8) |
C4—C5—C10—C1 | −52.9 (7) | C3—C4—C28—O28 | −36.3 (9) |
C6—C5—C10—C19 | −68.7 (7) | C5—C4—C28—O28 | −151.4 (7) |
C4—C5—C10—C19 | 63.4 (7) | C29—C4—C28—O28 | 86.0 (8) |
C6—C5—C10—C9 | 58.3 (6) | C3—C4—C28—O6 | 144.1 (5) |
C4—C5—C10—C9 | −169.6 (5) | C5—C4—C28—O6 | 29.0 (6) |
O1—C1—C10—C5 | −159.3 (5) | C29—C4—C28—O6 | −93.6 (5) |
C2—C1—C10—C5 | 22.9 (7) | C6—C7—O7—C13 | 169.1 (4) |
O1—C1—C10—C19 | 78.7 (7) | C8—C7—O7—C13 | 46.9 (5) |
C2—C1—C10—C19 | −99.1 (6) | C18—C13—O7—C7 | −158.0 (4) |
O1—C1—C10—C9 | −48.3 (7) | C17—C13—O7—C7 | 77.8 (5) |
C2—C1—C10—C9 | 133.9 (5) | C14—C13—O7—C7 | −34.6 (5) |
C11—C9—C10—C5 | −179.9 (5) | O28—C28—O6—C6 | 174.7 (6) |
C8—C9—C10—C5 | −49.4 (6) | C4—C28—O6—C6 | −5.7 (6) |
C11—C9—C10—C1 | 69.5 (6) | C7—C6—O6—C28 | −138.3 (5) |
C8—C9—C10—C1 | −160.0 (5) | C5—C6—O6—C28 | −20.7 (6) |
C11—C9—C10—C19 | −52.9 (7) | C20—C21—O21—C23 | 0.2 (7) |
C8—C9—C10—C19 | 77.6 (6) | C22—C23—O21—C21 | −1.3 (7) |
C8—C9—C11—C12 | 132.5 (6) | O12—C12—O27—C27 | −0.8 (10) |
C10—C9—C11—C12 | −95.0 (7) | C11—C12—O27—C27 | −178.8 (6) |
C9—C11—C12—O12 | 153.0 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
C3—H3···O12i | 0.93 | 2.56 | 3.466 (8) | 163 |
C6—H6···O1ii | 0.98 | 2.50 | 3.244 (7) | 132 |
C16—H17···O28iii | 0.93 | 2.47 | 3.387 (8) | 169 |
Symmetry codes: (i) −x+3/2, −y, z+1/2; (ii) −x+1, y+1/2, −z+1/2; (iii) −x+3/2, −y+1, z−1/2. |
Experimental details
(I) | (II) | |
Crystal data | ||
Chemical formula | C27H30O7 | C27H30O7 |
Mr | 466.51 | 466.51 |
Crystal system, space group | Orthorhombic, P212121 | Orthorhombic, P212121 |
Temperature (K) | 293 | 293 |
a, b, c (Å) | 12.115 (3), 12.225 (4), 15.710 (3) | 9.026 (2), 14.009 (18), 18.495 (5) |
V (Å3) | 2326.8 (10) | 2339 (3) |
Z | 4 | 4 |
Radiation type | Cu Kα | Mo Kα |
µ (mm−1) | 0.79 | 0.10 |
Crystal size (mm) | 0.40 × 0.25 × 0.15 | 0.40 × 0.25 × 0.20 |
Data collection | ||
Diffractometer | Enraf-Nonius CAD-4 diffractometer | Enraf-Nonius CAD-4 diffractometer |
Absorption correction | – | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2806, 2695, 1958 | 3895, 3864, 1434 |
Rint | 0.119 | 0.019 |
(sin θ/λ)max (Å−1) | 0.627 | 0.716 |
Refinement | ||
R[F2 > 2σ(F2)], wR(F2), S | 0.059, 0.183, 1.00 | 0.066, 0.198, 0.98 |
No. of reflections | 2695 | 3864 |
No. of parameters | 355 | 308 |
No. of restraints | 108 | 0 |
H-atom treatment | H-atom parameters constrained | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.41, −0.29 | 0.23, −0.23 |
Computer programs: CAD-4 EXPRESS (Enraf–Nonius, 1994), CAD-4 EXPRESS, XCAD4 (Harms & Wocadlo, 1995), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEPIII (Burnett & Johnson, 1996), SHELXL97 and PARST97 (Nardelli, 1995).
D—H···A | D—H | H···A | D···A | D—H···A |
C3—H3···O12i | 0.93 | 2.56 | 3.466 (8) | 163 |
C6—H6···O1ii | 0.98 | 2.50 | 3.244 (7) | 132 |
C16—H17···O28iii | 0.93 | 2.47 | 3.387 (8) | 169 |
Symmetry codes: (i) −x+3/2, −y, z+1/2; (ii) −x+1, y+1/2, −z+1/2; (iii) −x+3/2, −y+1, z−1/2. |
The neem (Azadirachta indica) and its constituents have been shown to possess bioinsecticidal activity at different levels (Chawla et al., 1996; Govindachari et al., 1992; Govindachari, Narasimhan et al., 1996; Govindachari & Geetha Gopalakrishnan, 1998). More than 300 limonoids have been isolated and many of them belong to the class of tetranortriterpenoids, the crystal structures of many of which have been established (Govindachari et al., 1994; Govindachari, Geetha Gopalakrishnan et al., 1996; Kabaleeswaran et al., 1994, 1997, 1999; Malathi et al., 2003). It has also been shown that the bioinsecticidal activity can be enhanced by photo-oxidation and microwave-induced oxidation (Suresh et al., 2002; Gopalakrishnan et al., 2001; Geetha Gopalakrishnan et al., 2000). The present paper reports the structures of two compounds, namely nimbolide, (I), a tetranortriterpenoid, isolated from the leaves of Azadirachta indica, and a novel rearranged product, isonimbolide, (II). The rearranged product was synthesized with a view to enhancing the activity of the native compound through the reaction of nimbolide with a Lewis acid, BF3·OEt2, in the presence of tetrabutylammonium bromide.
The chemical modification brought about the cleavage of the ether linkage between atoms C7 and C15. Due to stability constraints, there is a rearrangement of the double bond, from C13═C14 in nimbolide to C16═C17 in isonimbolide, along with ring closure between C7 and C13, resulting in the re-formation of the ether linkage. Hence, chemically, nimbolide and its isomer differ in the ether linkage, which is between C7 and C15 in nimbolide, and C7 and C13 in isonimbolide (scheme and Fig. 1). Nimbolide and isonimbolide thus differ primarily in the orientation of the –CH2COOMe group attached to C9. The orientation of this group can be defined by the torsion angle C8—C9—C11—C12, which is 91.1 (5)° in nimbolide and 132.5 (6)° in isonimbolide. The orientation of the carbomethoxy group (C9—C11—C12–027) is -ac [−148.8 (5)°] and sp [−29.0 (9)°] (Klyne & Prelog, 1960) in nimbolide and isonimbolide, respectively. These differences in the side-chain conformation arise due to the change in the orientation of ring I and the methyl group attached to C13 between nimbolide and isonimbolide. The migration of the double bond in ring I of isonimbolide accompanies a difference in the fusion of rings I/D, which is quasi-trans in nimbolide and trans in isonimbolide.
The ring junctions A/B, A/F, B/F and B/D in both structures are trans, trans, trans and cis, respectively. In isonimbolide, atom C13 is sp3 hybridized and the C18 methyl attached to this atom is in an α conformation. There are considerable variations in the torsion angles involving the atoms of rings D and I, which indicates that the reaction centre would have been atom O7, which is a potential centre for the coordination of the Lewis acid. In both structures, the rings A, B and F have sofa, chair and half-chair conformations, respectively (Cremer & Pople, 1975), and the methyl atoms C19, C29 and C30 are in β conformations. In nimbolide, the furan ring at C17 shows rotational disorder about the C17—C20 bond. This rotational flexibility has resulted in disorder of all the atoms of the furan ring except C20, and these atoms show split positions viz. C21A, O21A, C22A and C23A, and C21B, O21B, C22B and C23B. However, the furan ring of isonimbolide shows no disorder (Fig. 1 b). The orientation of this furan ring, described by the torsion angle C16—C17—C20—C22, are −101.2 (14) and −55.3 (13)° for the congeners A and B, respectively, in nimbolide, and −12.1 (10)° in isonimbolide. The angles between the least-squares planes of ring A and the furan ring E are 123.0 (7) and 95.6 (9)° for disorder components A and B, respectively, in nimbolide, and 151.4 (2)° in isonimbolide.
No significant hydrogen-bonding interactions are seen in nimbolide, but an interesting hydrogen-bonding pattern is present in isonimbolide, for which three hydrogen-bonded chain motifs (Bernstein et al., 1995) are observed (Table 1). The first, C3···O12(3/2 − x, −y, 1/2 + z), produces a C(9) chain parallel to the z axis. The second chain, a C(6) motif mediated by C6···O1(1 − x, 1/2 + y, 1/2 − z), runs parallel to the y axis. The third, linked by C16···O28(3/2 − x, 1 − y, z − 1/2), forms a C(9) chain along the z axis. These combine to generate a ring with an R44(24) motif (Fig. 2).