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The crystal structure of the title compound, C12H15ClN2OS, is composed of discrete mol­ecules with bond lengths and angles typical for thio­urea compounds of this class. The mol­ecule exists in the solid state in its thione form with typical thio­urea C—S and C—O bond lengths, as well as shortened C—N bonds. The plane containing the thio­urea group and the two attached C atoms is almost perpendicular to the benzene ring, forming a dihedral angle of 88.1 (3)°. An intra­molecular N—H...O hydrogen bond stabilizes the packing arrangement and the mol­ecules form inter­molecular N—H...S hydrogen bonds to generate a chain. The tert-butyl group is disordered equally over two sites.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807028280/ez2082sup1.cif
Contains datablocks I, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536807028280/ez2082Isup2.hkl
Contains datablock I

CCDC reference: 654951

Key indicators

  • Single-crystal X-ray study
  • T = 173 K
  • Mean [sigma](C-C) = 0.002 Å
  • Disorder in main residue
  • R factor = 0.023
  • wR factor = 0.062
  • Data-to-parameter ratio = 19.6

checkCIF/PLATON results

No syntax errors found



Alert level B PLAT220_ALERT_2_B Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.77 Ratio PLAT222_ALERT_3_B Large Non-Solvent H Ueq(max)/Ueq(min) ... 4.15 Ratio
Alert level C PLAT213_ALERT_2_C Atom C32 has ADP max/min Ratio ............. 3.30 prola PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C3 PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.11 PLAT301_ALERT_3_C Main Residue Disorder ......................... 15.00 Perc. PLAT779_ALERT_2_C Suspect or Irrelevant (Bond) Angle in CIF ...... 19.10 Deg. C32 -C3 -C32' 1.555 1.555 1.555
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 29.60 From the CIF: _reflns_number_total 3742 Count of symmetry unique reflns 2173 Completeness (_total/calc) 172.20% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 1569 Fraction of Friedel pairs measured 0.722 Are heavy atom types Z>Si present yes PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 30
0 ALERT level A = In general: serious problem 2 ALERT level B = Potentially serious problem 5 ALERT level C = Check and explain 2 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 5 ALERT type 2 Indicator that the structure model may be wrong or deficient 3 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check

Comment top

The background to this study has been set out in our previous work on the structural chemistry of N,N'-disubstituted thioureas (Shoukat et al., 2007). Herein, as a continuation of these studies, the structure of the title compound (I) is described. A depiction of the molecule is given in Fig. 1. Bond lengths and angles, see the table of selected geometric parameters, can be regarded as typical for N,N'-disubstituted thiourea compounds as found in the Cambridge Structural Database v5.28 (Allen, 2002; Khawar Rauf et al., 2006). The molecule exists in the thione form with typical thiourea C—S and C—O bonds, as well as shortened C—N bond lengths. The thiocarbonyl and carbonyl groups are almost coplanar (see selected geometric parameters table). The molecule features an intramolecular N—H···O hydrogen bond and in the crystal structure, molecules associate via N—H···S intermolecular hydrogen bonds to form a chain (see the table of hydrogen bond geometries; Fig 2).

Related literature top

For related literature, see: Shoukat et al. (2007); Khawar Rauf et al. (2006); Allen (2002).

Experimental top

Freshly prepared pivaloylisothiocyanate (1.43 g, 10 mmol) was stirred in acetone (30 ml) for 15 minutes. Neat 3-chloroaniline (1.3 g, 10 mmol) was then added and the resulting mixture was stirred for 1 h. The reaction mixture was then poured into acidified (pH 4) water and stirred well. The solid product was separated and washed with deionized water and purified by recrystallization from methanol/ 1,1-dichloromethane (1:10 v/v) to give fine crystals of (I), with an overall yield of 85%.

Refinement top

Hydrogen atoms bonded to C were included in calculated positions and refined as riding on their parent C atom with C—H = 0.95 Å Uiso(H) = 1.2Ueq(C) or C—H = 0.98 Å and Uiso(H) = 1.5Ueq(C), respectively, for aromatic and methyl C atoms. The H atoms bonded to N were freely refined. The tert-butyl group is disordered over two positions with site occupation factors of 0.50 (1)/0.50 (1). The C—C distances and C—C—C angles of the tert-butyl groups were restrained to be equal.

Structure description top

The background to this study has been set out in our previous work on the structural chemistry of N,N'-disubstituted thioureas (Shoukat et al., 2007). Herein, as a continuation of these studies, the structure of the title compound (I) is described. A depiction of the molecule is given in Fig. 1. Bond lengths and angles, see the table of selected geometric parameters, can be regarded as typical for N,N'-disubstituted thiourea compounds as found in the Cambridge Structural Database v5.28 (Allen, 2002; Khawar Rauf et al., 2006). The molecule exists in the thione form with typical thiourea C—S and C—O bonds, as well as shortened C—N bond lengths. The thiocarbonyl and carbonyl groups are almost coplanar (see selected geometric parameters table). The molecule features an intramolecular N—H···O hydrogen bond and in the crystal structure, molecules associate via N—H···S intermolecular hydrogen bonds to form a chain (see the table of hydrogen bond geometries; Fig 2).

For related literature, see: Shoukat et al. (2007); Khawar Rauf et al. (2006); Allen (2002).

Computing details top

Data collection: X-AREA (Stoe & Cie, 2001); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: XP in SHELXTL-Plus (Sheldrick, 1991); software used to prepare material for publication: SHELXL97.

Figures top
[Figure 1] Fig. 1. Molecular structure of (I) showing atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level.
[Figure 2] Fig. 2. Packing diagram of (I) with view onto the bc plane. Hydrogen bonds are shown as dashed lines.
1-(3-Chlorophenyl)-3-pivaloylthiourea top
Crystal data top
C12H15ClN2OSF(000) = 568
Mr = 270.77Dx = 1.350 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 34614 reflections
a = 6.1269 (2) Åθ = 3.5–29.8°
b = 10.2848 (4) ŵ = 0.43 mm1
c = 21.1360 (9) ÅT = 173 K
V = 1331.86 (9) Å3Block, colourless
Z = 40.49 × 0.49 × 0.47 mm
Data collection top
Stoe IPDSII two-circle
diffractometer
3742 independent reflections
Radiation source: fine-focus sealed tube3700 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.052
ω scansθmax = 29.6°, θmin = 3.5°
Absorption correction: multi-scan
(MULABS; Spek, 2003; Blessing, 1995)
h = 88
Tmin = 0.817, Tmax = 0.824k = 1414
35409 measured reflectionsl = 2929
Refinement top
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.023 w = 1/[σ2(Fo2) + (0.0361P)2 + 0.1922P]
where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.062(Δ/σ)max = 0.002
S = 1.04Δρmax = 0.22 e Å3
3742 reflectionsΔρmin = 0.18 e Å3
191 parametersExtinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
30 restraintsExtinction coefficient: 0.028 (2)
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack, (1983), 1573 Friedel pairs
Secondary atom site location: difference Fourier mapAbsolute structure parameter: 0.01 (4)
Crystal data top
C12H15ClN2OSV = 1331.86 (9) Å3
Mr = 270.77Z = 4
Orthorhombic, P212121Mo Kα radiation
a = 6.1269 (2) ŵ = 0.43 mm1
b = 10.2848 (4) ÅT = 173 K
c = 21.1360 (9) Å0.49 × 0.49 × 0.47 mm
Data collection top
Stoe IPDSII two-circle
diffractometer
3742 independent reflections
Absorption correction: multi-scan
(MULABS; Spek, 2003; Blessing, 1995)
3700 reflections with I > 2σ(I)
Tmin = 0.817, Tmax = 0.824Rint = 0.052
35409 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.023H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.062Δρmax = 0.22 e Å3
S = 1.04Δρmin = 0.18 e Å3
3742 reflectionsAbsolute structure: Flack, (1983), 1573 Friedel pairs
191 parametersAbsolute structure parameter: 0.01 (4)
30 restraints
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/UeqOcc. (<1)
Cl10.56583 (5)0.11877 (3)0.622329 (14)0.03278 (8)
S10.71872 (4)0.66862 (3)0.541901 (12)0.02455 (7)
O10.53343 (17)0.53031 (9)0.34538 (4)0.0357 (2)
N10.51185 (16)0.50045 (9)0.46671 (4)0.02377 (17)
H10.471 (3)0.4776 (19)0.4264 (9)0.052 (5)*
N20.72061 (15)0.65585 (8)0.41596 (4)0.02134 (16)
H20.821 (3)0.7168 (17)0.4228 (8)0.040 (4)*
C10.64372 (15)0.60313 (9)0.47266 (5)0.01990 (17)
C20.66320 (17)0.61904 (11)0.35498 (5)0.02307 (19)
C30.76111 (18)0.69697 (11)0.30021 (5)0.0255 (2)
C110.41745 (17)0.43202 (9)0.51909 (5)0.02176 (18)
C120.52851 (16)0.32519 (10)0.54368 (5)0.02213 (18)
H120.66880.30190.52830.027*
C130.42847 (18)0.25339 (10)0.59147 (5)0.02302 (19)
C140.2224 (2)0.28558 (11)0.61466 (5)0.0260 (2)
H140.15630.23520.64710.031*
C150.11545 (18)0.39324 (12)0.58923 (5)0.0283 (2)
H150.02470.41660.60470.034*
C160.21162 (18)0.46708 (10)0.54130 (5)0.02590 (19)
H160.13770.54020.52410.031*
C310.6919 (19)0.8377 (6)0.3090 (4)0.075 (3)0.501 (14)
H31A0.74980.87060.34920.112*0.501 (14)
H31B0.53220.84310.30950.112*0.501 (14)
H31C0.74910.89030.27410.112*0.501 (14)
C320.6826 (14)0.6375 (10)0.2402 (3)0.072 (3)0.501 (14)
H32A0.74300.68550.20410.108*0.501 (14)
H32B0.52290.64110.23870.108*0.501 (14)
H32C0.73030.54660.23810.108*0.501 (14)
C331.0128 (9)0.6913 (7)0.3023 (3)0.0448 (12)0.501 (14)
H33A1.06460.72960.34200.067*0.501 (14)
H33B1.07290.74010.26650.067*0.501 (14)
H33C1.06060.60050.29980.067*0.501 (14)
C31'0.6110 (11)0.8150 (7)0.2875 (3)0.0556 (14)0.499 (14)
H31D0.46070.78490.28140.083*0.499 (14)
H31E0.66050.86040.24930.083*0.499 (14)
H31F0.61680.87460.32360.083*0.499 (14)
C32'0.7525 (16)0.6115 (6)0.2407 (3)0.058 (2)0.499 (14)
H32D0.60260.58140.23380.087*0.499 (14)
H32E0.84880.53630.24620.087*0.499 (14)
H32F0.80070.66220.20400.087*0.499 (14)
C33'0.9919 (10)0.7433 (11)0.3097 (3)0.0562 (19)0.499 (14)
H33D1.03960.79180.27220.084*0.499 (14)
H33E1.08800.66820.31610.084*0.499 (14)
H33F0.99850.79990.34690.084*0.499 (14)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Cl10.04062 (15)0.02760 (12)0.03014 (13)0.00457 (11)0.00164 (11)0.00577 (10)
S10.02621 (11)0.02688 (12)0.02055 (11)0.00204 (9)0.00021 (9)0.00280 (9)
O10.0454 (5)0.0378 (5)0.0238 (4)0.0202 (4)0.0028 (4)0.0016 (3)
N10.0308 (4)0.0221 (4)0.0184 (4)0.0057 (3)0.0028 (3)0.0004 (3)
N20.0240 (4)0.0209 (3)0.0191 (4)0.0036 (3)0.0014 (3)0.0001 (3)
C10.0200 (4)0.0185 (4)0.0212 (4)0.0025 (3)0.0025 (3)0.0009 (3)
C20.0266 (4)0.0229 (4)0.0197 (4)0.0017 (4)0.0002 (3)0.0014 (4)
C30.0312 (5)0.0255 (4)0.0198 (4)0.0044 (4)0.0005 (4)0.0033 (4)
C110.0247 (4)0.0215 (4)0.0190 (4)0.0034 (4)0.0031 (4)0.0006 (3)
C120.0220 (4)0.0238 (4)0.0207 (4)0.0019 (3)0.0014 (3)0.0013 (4)
C130.0274 (5)0.0214 (4)0.0203 (4)0.0014 (4)0.0018 (4)0.0002 (3)
C140.0296 (5)0.0278 (5)0.0205 (4)0.0051 (4)0.0051 (4)0.0003 (4)
C150.0261 (5)0.0324 (5)0.0264 (5)0.0012 (4)0.0074 (4)0.0012 (4)
C160.0276 (4)0.0254 (4)0.0247 (5)0.0029 (4)0.0025 (4)0.0006 (4)
C310.118 (6)0.039 (2)0.068 (4)0.031 (3)0.045 (4)0.032 (2)
C320.077 (4)0.120 (6)0.019 (2)0.063 (4)0.013 (2)0.018 (3)
C330.0357 (15)0.060 (3)0.0384 (19)0.0093 (19)0.0065 (13)0.016 (2)
C31'0.067 (3)0.052 (3)0.048 (3)0.025 (2)0.018 (2)0.027 (2)
C32'0.106 (6)0.0388 (18)0.029 (2)0.036 (3)0.022 (3)0.0107 (15)
C33'0.043 (2)0.092 (5)0.034 (2)0.034 (3)0.0109 (18)0.030 (3)
Geometric parameters (Å, º) top
Cl1—C131.7466 (11)C14—H140.9500
S1—C11.6753 (10)C15—C161.3965 (15)
O1—C21.2272 (13)C15—H150.9500
N1—C11.3356 (13)C16—H160.9500
N1—C111.4337 (13)C31—H31A0.9800
N1—H10.918 (19)C31—H31B0.9800
N2—C21.3887 (13)C31—H31C0.9800
N2—C11.3972 (12)C32—H32A0.9800
N2—H20.889 (18)C32—H32B0.9800
C2—C31.5304 (14)C32—H32C0.9800
C3—C321.489 (6)C33—H33A0.9800
C3—C33'1.506 (5)C33—H33B0.9800
C3—C311.520 (5)C33—H33C0.9800
C3—C32'1.536 (5)C31'—H31D0.9800
C3—C331.544 (5)C31'—H31E0.9800
C3—C31'1.547 (5)C31'—H31F0.9800
C11—C161.3931 (14)C32'—H32D0.9800
C11—C121.3930 (14)C32'—H32E0.9800
C12—C131.3932 (14)C32'—H32F0.9800
C12—H120.9500C33'—H33D0.9800
C13—C141.3940 (16)C33'—H33E0.9800
C14—C151.3945 (16)C33'—H33F0.9800
C1—N1—C11124.02 (9)C11—C16—C15119.05 (10)
C1—N1—H1117.0 (12)C11—C16—H16120.5
C11—N1—H1118.8 (13)C15—C16—H16120.5
C2—N2—C1127.23 (9)C3—C31—H31A109.5
C2—N2—H2121.2 (11)C3—C31—H31B109.5
C1—N2—H2111.5 (11)H31A—C31—H31B109.5
N1—C1—N2115.47 (9)C3—C31—H31C109.5
N1—C1—S1124.48 (8)H31A—C31—H31C109.5
N2—C1—S1120.05 (7)H31B—C31—H31C109.5
O1—C2—N2121.35 (9)C3—C32—H32A109.5
O1—C2—C3121.22 (9)C3—C32—H32B109.5
N2—C2—C3117.39 (9)H32A—C32—H32B109.5
C32—C3—C31114.0 (4)C3—C32—H32C109.5
C32—C3—C2107.6 (3)H32A—C32—H32C109.5
C33'—C3—C2115.7 (2)H32B—C32—H32C109.5
C31—C3—C2107.3 (2)C3—C33—H33A109.5
C32—C3—C32'19.1 (5)C3—C33—H33B109.5
C33'—C3—C32'108.8 (4)H33A—C33—H33B109.5
C2—C3—C32'107.8 (3)C3—C33—H33C109.5
C32—C3—C33109.4 (4)H33A—C33—H33C109.5
C31—C3—C33108.1 (4)H33B—C33—H33C109.5
C2—C3—C33110.5 (3)C3—C31'—H31D109.5
C33'—C3—C31'109.5 (4)C3—C31'—H31E109.5
C2—C3—C31'108.0 (2)H31D—C31'—H31E109.5
C32'—C3—C31'106.6 (3)C3—C31'—H31F109.5
C16—C11—C12121.37 (9)H31D—C31'—H31F109.5
C16—C11—N1119.89 (9)H31E—C31'—H31F109.5
C12—C11—N1118.57 (9)C3—C32'—H32D109.5
C11—C12—C13118.27 (9)C3—C32'—H32E109.5
C11—C12—H12120.9H32D—C32'—H32E109.5
C13—C12—H12120.9C3—C32'—H32F109.5
C12—C13—C14121.83 (10)H32D—C32'—H32F109.5
C12—C13—Cl1118.61 (8)H32E—C32'—H32F109.5
C14—C13—Cl1119.56 (8)C3—C33'—H33D109.5
C13—C14—C15118.60 (10)C3—C33'—H33E109.5
C13—C14—H14120.7H33D—C33'—H33E109.5
C15—C14—H14120.7C3—C33'—H33F109.5
C14—C15—C16120.87 (10)H33D—C33'—H33F109.5
C14—C15—H15119.6H33E—C33'—H33F109.5
C16—C15—H15119.6
C11—N1—C1—N2179.50 (9)N2—C2—C3—C3358.8 (3)
C11—N1—C1—S10.31 (15)O1—C2—C3—C31'90.7 (4)
C2—N2—C1—N14.83 (15)N2—C2—C3—C31'87.0 (4)
C2—N2—C1—S1175.35 (8)C1—N1—C11—C1692.59 (13)
C1—N2—C2—O10.89 (17)C1—N1—C11—C1292.01 (13)
C1—N2—C2—C3176.75 (9)C16—C11—C12—C130.02 (15)
O1—C2—C3—C324.2 (5)N1—C11—C12—C13175.36 (9)
N2—C2—C3—C32178.2 (5)C11—C12—C13—C140.19 (15)
O1—C2—C3—C33'146.3 (5)C11—C12—C13—Cl1179.68 (7)
N2—C2—C3—C33'36.1 (5)C12—C13—C14—C150.34 (16)
O1—C2—C3—C31118.8 (6)Cl1—C13—C14—C15179.83 (9)
N2—C2—C3—C3158.8 (6)C13—C14—C15—C160.33 (17)
O1—C2—C3—C32'24.3 (4)C12—C11—C16—C150.02 (16)
N2—C2—C3—C32'158.1 (4)N1—C11—C16—C15175.29 (10)
O1—C2—C3—C33123.5 (3)C14—C15—C16—C110.18 (17)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O10.918 (19)1.836 (19)2.5863 (12)137.2 (18)
N2—H2···S1i0.889 (18)2.808 (18)3.6560 (9)159.8 (14)
Symmetry code: (i) x+1/2, y+3/2, z+1.

Experimental details

Crystal data
Chemical formulaC12H15ClN2OS
Mr270.77
Crystal system, space groupOrthorhombic, P212121
Temperature (K)173
a, b, c (Å)6.1269 (2), 10.2848 (4), 21.1360 (9)
V3)1331.86 (9)
Z4
Radiation typeMo Kα
µ (mm1)0.43
Crystal size (mm)0.49 × 0.49 × 0.47
Data collection
DiffractometerStoe IPDSII two-circle
Absorption correctionMulti-scan
(MULABS; Spek, 2003; Blessing, 1995)
Tmin, Tmax0.817, 0.824
No. of measured, independent and
observed [I > 2σ(I)] reflections
35409, 3742, 3700
Rint0.052
(sin θ/λ)max1)0.695
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.023, 0.062, 1.04
No. of reflections3742
No. of parameters191
No. of restraints30
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.22, 0.18
Absolute structureFlack, (1983), 1573 Friedel pairs
Absolute structure parameter0.01 (4)

Computer programs: X-AREA (Stoe & Cie, 2001), X-AREA, SHELXS97 (Sheldrick, 1990), SHELXL97 (Sheldrick, 1997), XP in SHELXTL-Plus (Sheldrick, 1991), SHELXL97.

Selected geometric parameters (Å, º) top
S1—C11.6753 (10)N1—C111.4337 (13)
O1—C21.2272 (13)N2—C21.3887 (13)
N1—C11.3356 (13)N2—C11.3972 (12)
C2—N2—C1—N14.83 (15)C1—N2—C2—O10.89 (17)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O10.918 (19)1.836 (19)2.5863 (12)137.2 (18)
N2—H2···S1i0.889 (18)2.808 (18)3.6560 (9)159.8 (14)
Symmetry code: (i) x+1/2, y+3/2, z+1.
 

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