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This work describes the first solid-state structural study of a cyclic enaminone derivative from Meldrum's acid, C
10H
13NO
4. The packing shows an infinite linear chain along [
1] mediated by dimeric N—H
O and nonclassical C—H
O hydrogen-bonding interactions.
Supporting information
CCDC reference: 642981
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean (C-C) = 0.004 Å
- R factor = 0.056
- wR factor = 0.185
- Data-to-parameter ratio = 14.9
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT154_ALERT_1_C The su's on the Cell Angles are Equal (x 10000) 300 Deg.
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
1 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
0 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Data collection: COLLECT (Nonius, 1998); cell refinement: SCALEPACK (Otwinowski & Minor, 1997); data reduction: SCALEPACK and DENZO (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 1990); software used to prepare material for publication: WinGX (Farrugia, 1999).
2,2-Dimethyl-5-(pyrrolidin-2-ylidene)-1,3-dioxane-4,6-dione
top
Crystal data top
C10H13NO4 | Z = 2 |
Mr = 211.21 | F(000) = 224 |
Triclinic, P1 | Dx = 1.376 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.5947 (3) Å | Cell parameters from 1818 reflections |
b = 9.1093 (5) Å | θ = 1.0–26.4° |
c = 10.3306 (5) Å | µ = 0.11 mm−1 |
α = 90.988 (3)° | T = 296 K |
β = 92.799 (3)° | Prism, colorless |
γ = 104.114 (3)° | 0.18 × 0.15 × 0.10 mm |
V = 509.75 (5) Å3 | |
Data collection top
Nonius KappaCCD diffractometer | Rint = 0.026 |
CCD rotation images, thick slices scans | θmax = 26.4°, θmin = 2.0° |
3639 measured reflections | h = −6→6 |
2053 independent reflections | k = −11→11 |
1305 reflections with I > 2σ(I) | l = −12→12 |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.056 | w = 1/[σ2(Fo2) + (0.1141P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.185 | (Δ/σ)max < 0.001 |
S = 1.05 | Δρmax = 0.33 e Å−3 |
2053 reflections | Δρmin = −0.26 e Å−3 |
138 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C5 | 0.1379 (4) | 0.2275 (2) | 0.66830 (19) | 0.0446 (5) | |
O3 | 0.4654 (3) | 0.31968 (16) | 0.82912 (14) | 0.0540 (4) | |
O9 | 0.4919 (3) | 0.42524 (18) | 0.63943 (15) | 0.0626 (5) | |
O1 | 0.1595 (3) | 0.10043 (16) | 0.86647 (15) | 0.0621 (5) | |
N11 | 0.1078 (3) | 0.3420 (2) | 0.46137 (17) | 0.0519 (5) | |
H11 | 0.2441 | 0.4098 | 0.4753 | 0.062* | |
C4 | 0.3688 (4) | 0.3301 (2) | 0.70740 (19) | 0.0456 (5) | |
C10 | 0.0201 (4) | 0.2416 (2) | 0.54740 (19) | 0.0443 (5) | |
O16 | −0.1317 (3) | −0.00601 (18) | 0.72008 (16) | 0.0745 (6) | |
C6 | 0.0389 (4) | 0.1018 (2) | 0.7487 (2) | 0.0524 (6) | |
C14 | −0.2243 (4) | 0.1465 (2) | 0.4958 (2) | 0.0557 (6) | |
H14A | −0.3499 | 0.144 | 0.5578 | 0.067* | |
H14B | −0.2142 | 0.0437 | 0.4764 | 0.067* | |
C2 | 0.2995 (4) | 0.2416 (3) | 0.9220 (2) | 0.0570 (6) | |
C7 | 0.4599 (5) | 0.2048 (4) | 1.0320 (3) | 0.0864 (9) | |
H7A | 0.3583 | 0.1412 | 1.0915 | 0.13* | |
H7B | 0.5489 | 0.2968 | 1.0764 | 0.13* | |
H7C | 0.5747 | 0.1529 | 0.9984 | 0.13* | |
C12 | −0.0422 (4) | 0.3306 (3) | 0.3403 (2) | 0.0633 (6) | |
H12A | 0.033 | 0.2892 | 0.2702 | 0.076* | |
H12B | −0.0664 | 0.4286 | 0.3162 | 0.076* | |
C8 | 0.1329 (5) | 0.3384 (3) | 0.9637 (3) | 0.0775 (8) | |
H8A | 0.0323 | 0.3556 | 0.8904 | 0.116* | |
H8B | 0.231 | 0.4336 | 0.9987 | 0.116* | |
H8C | 0.029 | 0.2877 | 1.0289 | 0.116* | |
C13 | −0.2825 (5) | 0.2242 (3) | 0.3722 (3) | 0.0728 (7) | |
H13A | −0.3426 | 0.1502 | 0.3021 | 0.087* | |
H13B | −0.4068 | 0.2798 | 0.3867 | 0.087* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C5 | 0.0472 (12) | 0.0386 (10) | 0.0417 (12) | −0.0028 (9) | 0.0084 (9) | 0.0052 (9) |
O3 | 0.0468 (9) | 0.0596 (9) | 0.0470 (9) | −0.0046 (7) | 0.0026 (7) | 0.0132 (7) |
O9 | 0.0575 (9) | 0.0608 (10) | 0.0551 (9) | −0.0141 (7) | 0.0028 (7) | 0.0172 (7) |
O1 | 0.0706 (10) | 0.0511 (9) | 0.0539 (10) | −0.0069 (8) | 0.0019 (8) | 0.0179 (7) |
N11 | 0.0527 (11) | 0.0493 (10) | 0.0461 (10) | −0.0021 (8) | −0.0001 (8) | 0.0068 (8) |
C4 | 0.0458 (11) | 0.0427 (11) | 0.0444 (12) | 0.0022 (9) | 0.0071 (9) | 0.0082 (9) |
C10 | 0.0461 (11) | 0.0392 (10) | 0.0441 (12) | 0.0025 (9) | 0.0095 (9) | 0.0002 (9) |
O16 | 0.0834 (12) | 0.0560 (10) | 0.0626 (11) | −0.0245 (9) | 0.0014 (9) | 0.0107 (8) |
C6 | 0.0564 (13) | 0.0448 (12) | 0.0485 (13) | −0.0038 (10) | 0.0088 (11) | 0.0053 (10) |
C14 | 0.0505 (13) | 0.0522 (12) | 0.0573 (14) | −0.0007 (10) | 0.0025 (10) | −0.0017 (10) |
C2 | 0.0557 (13) | 0.0597 (13) | 0.0439 (12) | −0.0095 (10) | 0.0044 (10) | 0.0108 (10) |
C7 | 0.0799 (18) | 0.097 (2) | 0.0654 (17) | −0.0107 (15) | −0.0090 (14) | 0.0364 (15) |
C12 | 0.0714 (16) | 0.0626 (14) | 0.0510 (14) | 0.0085 (12) | −0.0062 (11) | 0.0063 (11) |
C8 | 0.0711 (16) | 0.0909 (19) | 0.0634 (16) | 0.0051 (14) | 0.0145 (13) | −0.0146 (14) |
C13 | 0.0656 (16) | 0.0756 (17) | 0.0708 (17) | 0.0078 (12) | −0.0137 (13) | 0.0066 (13) |
Geometric parameters (Å, º) top
O1—C2 | 1.427 (3) | C14—C13 | 1.529 (4) |
O1—C6 | 1.363 (3) | N11—H11 | 0.86 |
O3—C2 | 1.441 (2) | C7—H7A | 0.96 |
O3—C4 | 1.358 (2) | C7—H7B | 0.96 |
O9—C4 | 1.223 (2) | C7—H7C | 0.96 |
O16—C6 | 1.211 (2) | C8—H8A | 0.96 |
N11—C10 | 1.311 (3) | C8—H8B | 0.96 |
N11—C12 | 1.460 (3) | C8—H8C | 0.96 |
C2—C7 | 1.507 (3) | C12—H12A | 0.97 |
C2—C8 | 1.503 (3) | C12—H12B | 0.97 |
C5—C4 | 1.433 (3) | C13—H13A | 0.97 |
C5—C6 | 1.441 (3) | C13—H13B | 0.97 |
C5—C10 | 1.406 (3) | C14—H14A | 0.97 |
C10—C14 | 1.497 (3) | C14—H14B | 0.97 |
C12—C13 | 1.508 (4) | | |
| | | |
C6—O1—C2 | 117.86 (16) | C2—C7—H7B | 109.5 |
C4—O3—C2 | 117.15 (16) | C2—C7—H7C | 109.5 |
C10—N11—C12 | 115.23 (18) | C2—C8—H8A | 109.5 |
O1—C2—O3 | 109.59 (17) | C2—C8—H8B | 109.5 |
O1—C2—C8 | 110.93 (18) | C2—C8—H8C | 109.5 |
O3—C2—C8 | 110.1 (2) | N11—C12—H12A | 111.2 |
O1—C2—C7 | 106.7 (2) | N11—C12—H12B | 111.2 |
O3—C2—C7 | 106.18 (18) | C13—C12—H12A | 111.2 |
C8—C2—C7 | 113.2 (2) | C13—C12—H12B | 111.2 |
O9—C4—O3 | 116.27 (18) | C12—C13—H13A | 110.6 |
O9—C4—C5 | 125.7 (2) | C14—C13—H13A | 110.6 |
O3—C4—C5 | 118.03 (17) | C12—C13—H13B | 110.6 |
C4—C5—C6 | 119.29 (19) | C14—C13—H13B | 110.6 |
C10—C5—C4 | 120.25 (18) | C10—C14—H14A | 110.8 |
C10—C5—C6 | 120.23 (18) | C10—C14—H14B | 110.8 |
O16—C6—O1 | 116.87 (18) | C13—C14—H14A | 110.8 |
O1—C6—C5 | 116.19 (18) | C13—C14—H14B | 110.8 |
O16—C6—C5 | 126.8 (2) | H7A—C7—H7B | 109.5 |
N11—C10—C5 | 125.05 (19) | H7A—C7—H7C | 109.5 |
N11—C10—C14 | 108.79 (19) | H7B—C7—H7C | 109.5 |
C5—C10—C14 | 126.16 (18) | H8A—C8—H8B | 109.5 |
N11—C12—C13 | 103.00 (18) | H8A—C8—H8C | 109.5 |
C12—C13—C14 | 105.56 (19) | H8B—C8—H8C | 109.5 |
C10—C14—C13 | 104.53 (19) | H12A—C12—H12B | 109.1 |
C10—N11—H11 | 122.4 | H13A—C13—H13B | 108.8 |
C12—N11—H11 | 122.4 | H14A—C14—H14B | 108.9 |
C2—C7—H7A | 109.5 | | |
| | | |
C2—O1—C6—O16 | −159.1 (2) | C10—C5—C4—O3 | 174.77 (16) |
C2—O1—C6—C5 | 24.5 (3) | C10—C5—C4—O9 | −7.1 (3) |
C6—O1—C2—O3 | −51.9 (3) | C4—C5—C6—O1 | 8.0 (3) |
C6—O1—C2—C8 | 69.9 (2) | C4—C5—C6—O16 | −168.0 (2) |
C6—O1—C2—C7 | −166.42 (18) | C10—C5—C6—O1 | −177.51 (16) |
C4—O3—C2—O1 | 48.4 (2) | C10—C5—C6—O16 | 6.5 (3) |
C4—O3—C2—C8 | −73.8 (2) | C4—C5—C10—N11 | 1.8 (3) |
C4—O3—C2—C7 | 163.3 (2) | C6—C5—C10—N11 | −172.60 (18) |
C2—O3—C4—O9 | 163.01 (18) | C4—C5—C10—C14 | −177.80 (18) |
C2—O3—C4—C5 | −18.7 (3) | C6—C5—C10—C14 | 7.8 (3) |
C12—N11—C10—C5 | 177.38 (18) | N11—C10—C14—C13 | −8.1 (2) |
C12—N11—C10—C14 | −3.0 (2) | C5—C10—C14—C13 | 171.5 (2) |
C10—N11—C12—C13 | 12.8 (3) | N11—C12—C13—C14 | −16.6 (2) |
C6—C5—C4—O3 | −10.8 (3) | C10—C14—C13—C12 | 15.4 (2) |
C6—C5—C4—O9 | 167.37 (19) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N11—H11···O9 | 0.86 | 2.12 | 2.710 (2) | 126 |
N11—H11···O9i | 0.86 | 2.24 | 2.930 (2) | 138 |
C7—H7A···O16ii | 0.96 | 2.54 | 3.494 (3) | 170 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x, −y, −z+2. |
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