Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807055432/dn2255sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807055432/dn2255Isup2.hkl |
CCDC reference: 672880
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.004 Å
- R factor = 0.050
- wR factor = 0.151
- Data-to-parameter ratio = 15.8
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 2.94 Ratio PLAT230_ALERT_2_C Hirshfeld Test Diff for C3 - C4 .. 5.31 su PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C4 PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C11 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C2 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C6 PLAT420_ALERT_2_C D-H Without Acceptor N1 - H1 ... ? PLAT480_ALERT_4_C Long H...A H-Bond Reported H1 .. CL2 .. 2.88 Ang.
Alert level G PLAT793_ALERT_1_G Check the Absolute Configuration of C7 = ... R PLAT793_ALERT_1_G Check the Absolute Configuration of C8 = ... S PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 1
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 8 ALERT level C = Check and explain 3 ALERT level G = General alerts; check 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 7 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
For related literature, see: Cremer & Pople (1975); Fuganti et al. (1994); Ren et al. (2001).
1-(amino(phenyl)methyl)naphthalen-2-ol(1 mmol, 0.249 g) was dissolved in anhydrous methanol, the mixture was stirred for several minitutes, 2,6-dichlorobenzyaldehyde(1 mmol 0.175 g) in methanol (8 ml) was added dropwise and the mixture was stirred at room temperature for 2 h. The product was isolated and recrystallized in methanol, colourless single crystals of (I) was obtained after 3 d.
All H atoms attached to C atoms were fixed geometrically and treated as riding with C—H = 0.93 Å (aromatic) or 0.98 Å (methine) with Uiso(H) = 1.2Ueq(C). H atoms attached to nitrogen has been located in difference Fourier maps and included in the subsequent refinement using restraints (N—H= 0.86 (1) Å with Uiso(H) = 1.5Ueq(N).
Data collection: SMART (Bruker, 1998); cell refinement: SMART; data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997a); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997a); molecular graphics: SHELXTL (Sheldrick, 1997b); software used to prepare material for publication: SHELXTL.
Fig. 1. Molecular view of (I) with the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level. H atoms are presented as small spheres of arbitrary radii. |
C24H17Cl2NO | F(000) = 1680 |
Mr = 406.29 | Dx = 1.380 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 1420 reflections |
a = 10.8041 (9) Å | θ = 2.2–24.3° |
b = 10.0189 (9) Å | µ = 0.35 mm−1 |
c = 36.119 (3) Å | T = 298 K |
V = 3909.7 (6) Å3 | Block, colourless |
Z = 8 | 0.27 × 0.23 × 0.22 mm |
Bruker SMART APEX CCD area-detector diffractometer | 4060 independent reflections |
Radiation source: sealed tube | 2484 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.047 |
ϕ and ω scans | θmax = 26.5°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | h = −13→13 |
Tmin = 0.912, Tmax = 0.928 | k = −12→12 |
43758 measured reflections | l = −45→45 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.050 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.151 | w = 1/[σ2(Fo2) + (0.0627P)2 + 1.1294P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max = 0.001 |
4060 reflections | Δρmax = 0.22 e Å−3 |
257 parameters | Δρmin = −0.40 e Å−3 |
1 restraint | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0016 (4) |
C24H17Cl2NO | V = 3909.7 (6) Å3 |
Mr = 406.29 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 10.8041 (9) Å | µ = 0.35 mm−1 |
b = 10.0189 (9) Å | T = 298 K |
c = 36.119 (3) Å | 0.27 × 0.23 × 0.22 mm |
Bruker SMART APEX CCD area-detector diffractometer | 4060 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | 2484 reflections with I > 2σ(I) |
Tmin = 0.912, Tmax = 0.928 | Rint = 0.047 |
43758 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | 1 restraint |
wR(F2) = 0.151 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.22 e Å−3 |
4060 reflections | Δρmin = −0.40 e Å−3 |
257 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.35756 (10) | −0.01015 (9) | 0.47316 (3) | 0.1301 (4) | |
Cl2 | −0.05546 (8) | 0.25328 (10) | 0.42897 (3) | 0.1288 (4) | |
O1 | 0.09492 (15) | 0.05472 (17) | 0.39088 (5) | 0.0714 (5) | |
N1 | 0.24544 (18) | 0.23064 (18) | 0.40158 (5) | 0.0577 (5) | |
H1 | 0.1936 (18) | 0.2944 (18) | 0.4028 (7) | 0.069* | |
C1 | 0.1477 (2) | 0.1169 (2) | 0.45289 (6) | 0.0616 (6) | |
C2 | 0.2172 (3) | 0.0667 (3) | 0.48184 (8) | 0.0848 (9) | |
C3 | 0.1796 (6) | 0.0765 (5) | 0.51820 (10) | 0.1315 (17) | |
H3 | 0.2287 | 0.0428 | 0.5371 | 0.158* | |
C4 | 0.0693 (7) | 0.1363 (6) | 0.52598 (13) | 0.160 (3) | |
H4 | 0.0429 | 0.1420 | 0.5504 | 0.192* | |
C5 | −0.0030 (5) | 0.1882 (4) | 0.49849 (14) | 0.1293 (17) | |
H5 | −0.0779 | 0.2292 | 0.5041 | 0.155* | |
C6 | 0.0363 (3) | 0.1790 (3) | 0.46230 (8) | 0.0840 (8) | |
C7 | 0.1943 (2) | 0.1069 (2) | 0.41385 (6) | 0.0577 (5) | |
H7 | 0.2612 | 0.0409 | 0.4137 | 0.069* | |
C8 | 0.2899 (2) | 0.2203 (2) | 0.36306 (6) | 0.0545 (5) | |
H8 | 0.3082 | 0.3110 | 0.3545 | 0.065* | |
C9 | 0.4104 (2) | 0.1421 (2) | 0.36226 (6) | 0.0564 (6) | |
C10 | 0.5121 (3) | 0.1931 (3) | 0.38075 (8) | 0.0844 (8) | |
H10 | 0.5061 | 0.2749 | 0.3928 | 0.101* | |
C11 | 0.6226 (3) | 0.1236 (5) | 0.38154 (10) | 0.1080 (11) | |
H11 | 0.6904 | 0.1590 | 0.3940 | 0.130* | |
C12 | 0.6325 (3) | 0.0028 (4) | 0.36396 (11) | 0.1008 (11) | |
H12 | 0.7066 | −0.0443 | 0.3649 | 0.121* | |
C13 | 0.5331 (2) | −0.0489 (3) | 0.34496 (8) | 0.0822 (8) | |
H13 | 0.5399 | −0.1302 | 0.3327 | 0.099* | |
C14 | 0.4232 (2) | 0.0211 (2) | 0.34435 (6) | 0.0625 (6) | |
H14 | 0.3560 | −0.0140 | 0.3315 | 0.075* | |
C15 | 0.18997 (19) | 0.1652 (2) | 0.33852 (6) | 0.0547 (5) | |
C16 | 0.0986 (2) | 0.0886 (2) | 0.35411 (7) | 0.0610 (6) | |
C17 | −0.0003 (2) | 0.0385 (3) | 0.33265 (9) | 0.0773 (7) | |
H17 | −0.0624 | −0.0114 | 0.3438 | 0.093* | |
C18 | −0.0047 (3) | 0.0632 (3) | 0.29574 (9) | 0.0852 (8) | |
H18 | −0.0697 | 0.0289 | 0.2818 | 0.102* | |
C19 | 0.0876 (2) | 0.1399 (3) | 0.27812 (8) | 0.0737 (7) | |
C20 | 0.0857 (3) | 0.1656 (3) | 0.23973 (9) | 0.0939 (10) | |
H20 | 0.0224 | 0.1297 | 0.2254 | 0.113* | |
C21 | 0.1733 (4) | 0.2410 (4) | 0.22337 (9) | 0.1035 (11) | |
H21 | 0.1708 | 0.2556 | 0.1980 | 0.124* | |
C22 | 0.2678 (3) | 0.2969 (3) | 0.24464 (7) | 0.0895 (9) | |
H22 | 0.3269 | 0.3509 | 0.2334 | 0.107* | |
C23 | 0.2741 (3) | 0.2731 (3) | 0.28176 (7) | 0.0729 (7) | |
H23 | 0.3383 | 0.3104 | 0.2955 | 0.088* | |
C24 | 0.1852 (2) | 0.1931 (2) | 0.29982 (6) | 0.0609 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.1270 (8) | 0.0978 (6) | 0.1654 (9) | 0.0119 (5) | −0.0736 (7) | −0.0025 (6) |
Cl2 | 0.0843 (6) | 0.1073 (7) | 0.1950 (11) | 0.0303 (5) | 0.0179 (6) | 0.0009 (7) |
O1 | 0.0700 (11) | 0.0685 (10) | 0.0757 (11) | −0.0240 (8) | 0.0004 (8) | −0.0048 (8) |
N1 | 0.0622 (11) | 0.0528 (11) | 0.0580 (11) | −0.0092 (9) | 0.0081 (9) | −0.0083 (9) |
C1 | 0.0713 (15) | 0.0489 (12) | 0.0646 (14) | −0.0111 (11) | 0.0114 (12) | −0.0030 (10) |
C2 | 0.119 (2) | 0.0648 (16) | 0.0710 (18) | −0.0322 (16) | −0.0129 (16) | 0.0017 (13) |
C3 | 0.210 (5) | 0.119 (3) | 0.065 (2) | −0.084 (3) | −0.012 (3) | 0.002 (2) |
C4 | 0.269 (8) | 0.130 (4) | 0.082 (3) | −0.111 (5) | 0.069 (4) | −0.040 (3) |
C5 | 0.159 (4) | 0.091 (3) | 0.138 (3) | −0.045 (2) | 0.091 (3) | −0.044 (3) |
C6 | 0.090 (2) | 0.0641 (15) | 0.098 (2) | −0.0122 (14) | 0.0370 (17) | −0.0110 (14) |
C7 | 0.0571 (12) | 0.0524 (12) | 0.0635 (14) | −0.0051 (10) | 0.0047 (11) | −0.0061 (10) |
C8 | 0.0579 (13) | 0.0556 (13) | 0.0499 (12) | −0.0091 (10) | 0.0031 (10) | −0.0052 (10) |
C9 | 0.0503 (12) | 0.0688 (14) | 0.0501 (12) | −0.0107 (11) | 0.0028 (10) | 0.0029 (10) |
C10 | 0.0659 (17) | 0.105 (2) | 0.0820 (18) | −0.0120 (16) | −0.0122 (14) | −0.0117 (16) |
C11 | 0.0606 (19) | 0.146 (3) | 0.118 (3) | −0.018 (2) | −0.0249 (17) | 0.009 (2) |
C12 | 0.0507 (16) | 0.124 (3) | 0.128 (3) | 0.0081 (18) | 0.0072 (17) | 0.032 (2) |
C13 | 0.0639 (17) | 0.0863 (19) | 0.097 (2) | 0.0076 (14) | 0.0183 (15) | 0.0106 (16) |
C14 | 0.0507 (13) | 0.0715 (15) | 0.0654 (14) | −0.0034 (11) | 0.0071 (10) | −0.0002 (12) |
C15 | 0.0493 (12) | 0.0532 (12) | 0.0617 (14) | 0.0032 (10) | −0.0030 (10) | −0.0102 (10) |
C16 | 0.0564 (13) | 0.0573 (13) | 0.0693 (16) | −0.0006 (11) | −0.0041 (11) | −0.0107 (11) |
C17 | 0.0573 (14) | 0.0706 (16) | 0.104 (2) | −0.0080 (12) | −0.0128 (14) | −0.0130 (15) |
C18 | 0.0732 (18) | 0.0804 (18) | 0.102 (2) | 0.0057 (15) | −0.0364 (16) | −0.0224 (16) |
C19 | 0.0710 (16) | 0.0706 (16) | 0.0795 (18) | 0.0176 (14) | −0.0211 (14) | −0.0187 (13) |
C20 | 0.103 (2) | 0.102 (2) | 0.076 (2) | 0.030 (2) | −0.0342 (18) | −0.0223 (17) |
C21 | 0.128 (3) | 0.122 (3) | 0.0605 (18) | 0.041 (2) | −0.016 (2) | −0.0045 (18) |
C22 | 0.104 (2) | 0.102 (2) | 0.0623 (17) | 0.0224 (18) | 0.0041 (16) | 0.0032 (15) |
C23 | 0.0777 (17) | 0.0803 (17) | 0.0608 (15) | 0.0121 (14) | 0.0002 (13) | −0.0053 (13) |
C24 | 0.0617 (14) | 0.0614 (13) | 0.0594 (14) | 0.0156 (12) | −0.0084 (11) | −0.0092 (11) |
Cl1—C2 | 1.729 (4) | C11—C12 | 1.371 (5) |
Cl2—C6 | 1.728 (3) | C11—H11 | 0.9300 |
O1—C16 | 1.371 (3) | C12—C13 | 1.376 (4) |
O1—C7 | 1.454 (3) | C12—H12 | 0.9300 |
N1—C7 | 1.428 (3) | C13—C14 | 1.379 (3) |
N1—C8 | 1.476 (3) | C13—H13 | 0.9300 |
N1—H1 | 0.851 (10) | C14—H14 | 0.9300 |
C1—C2 | 1.382 (4) | C15—C16 | 1.372 (3) |
C1—C6 | 1.397 (4) | C15—C24 | 1.426 (3) |
C1—C7 | 1.500 (3) | C16—C17 | 1.412 (3) |
C2—C3 | 1.378 (5) | C17—C18 | 1.357 (4) |
C3—C4 | 1.363 (7) | C17—H17 | 0.9300 |
C3—H3 | 0.9300 | C18—C19 | 1.410 (4) |
C4—C5 | 1.366 (7) | C18—H18 | 0.9300 |
C4—H4 | 0.9300 | C19—C20 | 1.411 (4) |
C5—C6 | 1.377 (5) | C19—C24 | 1.418 (3) |
C5—H5 | 0.9300 | C20—C21 | 1.347 (5) |
C7—H7 | 0.9800 | C20—H20 | 0.9300 |
C8—C15 | 1.502 (3) | C21—C22 | 1.396 (5) |
C8—C9 | 1.520 (3) | C21—H21 | 0.9300 |
C8—H8 | 0.9800 | C22—C23 | 1.363 (4) |
C9—C14 | 1.381 (3) | C22—H22 | 0.9300 |
C9—C10 | 1.384 (3) | C23—C24 | 1.411 (4) |
C10—C11 | 1.382 (5) | C23—H23 | 0.9300 |
C10—H10 | 0.9300 | ||
C16—O1—C7 | 116.25 (17) | C12—C11—H11 | 119.9 |
C7—N1—C8 | 110.97 (16) | C10—C11—H11 | 119.9 |
C7—N1—H1 | 112.4 (17) | C11—C12—C13 | 120.2 (3) |
C8—N1—H1 | 108.3 (17) | C11—C12—H12 | 119.9 |
C2—C1—C6 | 116.5 (2) | C13—C12—H12 | 119.9 |
C2—C1—C7 | 120.3 (2) | C12—C13—C14 | 119.2 (3) |
C6—C1—C7 | 123.2 (2) | C12—C13—H13 | 120.4 |
C3—C2—C1 | 122.3 (4) | C14—C13—H13 | 120.4 |
C3—C2—Cl1 | 117.6 (3) | C13—C14—C9 | 121.7 (2) |
C1—C2—Cl1 | 120.1 (2) | C13—C14—H14 | 119.2 |
C4—C3—C2 | 119.1 (5) | C9—C14—H14 | 119.2 |
C4—C3—H3 | 120.5 | C16—C15—C24 | 119.1 (2) |
C2—C3—H3 | 120.5 | C16—C15—C8 | 118.7 (2) |
C3—C4—C5 | 121.2 (4) | C24—C15—C8 | 122.2 (2) |
C3—C4—H4 | 119.4 | O1—C16—C15 | 123.9 (2) |
C5—C4—H4 | 119.4 | O1—C16—C17 | 114.9 (2) |
C4—C5—C6 | 119.2 (5) | C15—C16—C17 | 121.2 (2) |
C4—C5—H5 | 120.4 | C18—C17—C16 | 120.1 (3) |
C6—C5—H5 | 120.4 | C18—C17—H17 | 120.0 |
C5—C6—C1 | 121.8 (4) | C16—C17—H17 | 120.0 |
C5—C6—Cl2 | 117.1 (3) | C17—C18—C19 | 121.2 (2) |
C1—C6—Cl2 | 121.1 (2) | C17—C18—H18 | 119.4 |
N1—C7—O1 | 114.88 (18) | C19—C18—H18 | 119.4 |
N1—C7—C1 | 111.32 (17) | C18—C19—C20 | 122.2 (3) |
O1—C7—C1 | 108.22 (17) | C18—C19—C24 | 118.8 (2) |
N1—C7—H7 | 107.4 | C20—C19—C24 | 119.1 (3) |
O1—C7—H7 | 107.4 | C21—C20—C19 | 121.5 (3) |
C1—C7—H7 | 107.4 | C21—C20—H20 | 119.2 |
N1—C8—C15 | 110.36 (17) | C19—C20—H20 | 119.2 |
N1—C8—C9 | 109.43 (17) | C20—C21—C22 | 119.9 (3) |
C15—C8—C9 | 114.52 (17) | C20—C21—H21 | 120.1 |
N1—C8—H8 | 107.4 | C22—C21—H21 | 120.1 |
C15—C8—H8 | 107.4 | C23—C22—C21 | 120.5 (3) |
C9—C8—H8 | 107.4 | C23—C22—H22 | 119.7 |
C14—C9—C10 | 118.1 (2) | C21—C22—H22 | 119.8 |
C14—C9—C8 | 123.17 (19) | C22—C23—C24 | 121.3 (3) |
C10—C9—C8 | 118.7 (2) | C22—C23—H23 | 119.3 |
C11—C10—C9 | 120.7 (3) | C24—C23—H23 | 119.3 |
C11—C10—H10 | 119.7 | C23—C24—C19 | 117.7 (2) |
C9—C10—H10 | 119.7 | C23—C24—C15 | 122.6 (2) |
C12—C11—C10 | 120.1 (3) | C19—C24—C15 | 119.7 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···Cl2 | 0.85 (1) | 2.88 (2) | 3.406 (2) | 122 (2) |
Experimental details
Crystal data | |
Chemical formula | C24H17Cl2NO |
Mr | 406.29 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 298 |
a, b, c (Å) | 10.8041 (9), 10.0189 (9), 36.119 (3) |
V (Å3) | 3909.7 (6) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.35 |
Crystal size (mm) | 0.27 × 0.23 × 0.22 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 1998) |
Tmin, Tmax | 0.912, 0.928 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 43758, 4060, 2484 |
Rint | 0.047 |
(sin θ/λ)max (Å−1) | 0.628 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.151, 1.05 |
No. of reflections | 4060 |
No. of parameters | 257 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.22, −0.40 |
Computer programs: SMART (Bruker, 1998), SMART, SAINT (Bruker, 1998), SHELXS97 (Sheldrick, 1997a), SHELXL97 (Sheldrick, 1997a), SHELXTL (Sheldrick, 1997b), SHELXTL.
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···Cl2 | 0.851 (10) | 2.88 (2) | 3.406 (2) | 121.6 (19) |
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The class of oxazine derivatives is useful heterocyclic compound which is widely used as antimalarial agent(Ren et al.,2001) and a versatile intermediate for the synthesis of carbapenems(Fuganti et al., 1994). Here we present the synthesis and crystal structure of the title compound(I).
The oxazine ring is distorted and adopts a half chair conformation(Fig.1), the dihedral angle between the O1/C15/C16 plane and the N1/C1/C7/C8 plane is 46.08°.
The ring puckering parameters (Cremer & Pople, 1975) for the oxazine are, Q = 0.450 (2) Å, θ = 125.0 (3) ° and ϕ = 298.2 (3) ° indicating an enveloppe conformation. The dichlorophenyl ring makes dihedral angles of 61.27 (18)° and 61.35 (15)° with the benzene ring and the naphthyl system, respectively. The C7—O1 and C7—N1 bond lengths are 1.454 (3) Å and 1.429 (3)\%A. The structure is stabilized by intramolecular N1—H1···Cl2 hydrogen bond(table 1).