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The carboxy group of 2-methyl-
N-[(2-nitrophenyl)sulfonyl]alanine, C
10H
12N
2O
6S, forms centrosymmetric hydrogen-bonded dimers with an O
O distance of 2.629 (2) Å and an intramolecular N—H
O(nitro) hydrogen bond N
O distance of 2.823 (2) Å. 1-[(2-Nitrophenyl)sulfonylamino]cyclohexanecarboxylic acid, C
13H
16N
2O
6S, has
Z′ = 2 and forms similar interactions.
Supporting information
CCDC references: 156173; 156174
Compounds (1) and (2) were prepared by reacting the corresponding amino acid (1 eq.) with chlorotrimethylsilane (1.85 eq), diisopropylethylamine, (2.3 eq) and ortho-nitrobenzenesulfonyl chloride (0.9 eq) in anhydrous dichloromethane over 12 h (273 K to reflux), followed by aqueous work-up and extraction. Both amino acid derivatives were crystallized by dissolving the crude material in a hot ethanol solution, followed by slow cooling to room temperature.
Carboxy and N—H H atoms were located in difference maps and refined individually. Other H atoms were placed in calculated positions with C—H bond distances 0.95 for phenyl and 0.98 Å for methyl, and thereafter treated as riding. A torsional parameter was refined for each methyl group. Uiso = 1.2Ueq of the attached C (1.5 for methyl).
For both compounds, data collection: CAD-4 EXPRESS (Enraf Nonius, 1994); cell refinement: CAD-4 EXPRESS. Data reduction: XCAD4 (Harms & Wocadlo, 1995) for (I); maXus (Mackay et al., 1999) for (II). Program(s) used to solve structure: SHELXS97 (Sheldrick, 199b) for (I); SIR92 (Altomare et al., 1993) for (II). For both compounds, program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997). Software used to prepare material for publication: WinGX publication routines (Farrugia, 1999) for (I); SHELXL97 (Sheldrick, 1997) for (II).
(I)
N-(2-nitrobenzenesulfonyl)-2-amino isobutyric acid
top
Crystal data top
C10H12N2O6S | F(000) = 600 |
Mr = 288.28 | Dx = 1.572 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 11.665 (3) Å | Cell parameters from 25 reflections |
b = 10.614 (2) Å | θ = 14.8–21.1° |
c = 11.121 (4) Å | µ = 0.29 mm−1 |
β = 117.80 (2)° | T = 100 K |
V = 1217.9 (6) Å3 | Prism, colorless |
Z = 4 | 0.45 × 0.43 × 0.20 mm |
Data collection top
Enraf-Nonius CAD4 (with Oxford Cryostream) diffractometer | Rint = 0.035 |
ω–2θ scans | θmax = 30.0°, θmin = 2.7° |
Absorption correction: ψ scan (North et al., 1968) | h = −16→14 |
Tmin = 0.880, Tmax = 0.944 | k = −14→8 |
4282 measured reflections | l = 0→15 |
3536 independent reflections | 3 standard reflections every 60 min |
2710 reflections with I > 2σ(I) | intensity decay: 5.0% |
Refinement top
Refinement on F2 | H atoms treated by a mixture of independent and constrained refinement |
Least-squares matrix: full | w = 1/[σ2(Fo2) + (0.0437P)2 + 0.4249P] where P = (Fo2 + 2Fc2)/3 |
R[F2 > 2σ(F2)] = 0.042 | (Δ/σ)max = 0.001 |
wR(F2) = 0.109 | Δρmax = 0.46 e Å−3 |
S = 1.03 | Δρmin = −0.37 e Å−3 |
3536 reflections | Extinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
183 parameters | Extinction coefficient: 0.0105 (14) |
0 restraints | |
Crystal data top
C10H12N2O6S | V = 1217.9 (6) Å3 |
Mr = 288.28 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 11.665 (3) Å | µ = 0.29 mm−1 |
b = 10.614 (2) Å | T = 100 K |
c = 11.121 (4) Å | 0.45 × 0.43 × 0.20 mm |
β = 117.80 (2)° | |
Data collection top
Enraf-Nonius CAD4 (with Oxford Cryostream) diffractometer | 2710 reflections with I > 2σ(I) |
Absorption correction: ψ scan (North et al., 1968) | Rint = 0.035 |
Tmin = 0.880, Tmax = 0.944 | 3 standard reflections every 60 min |
4282 measured reflections | intensity decay: 5.0% |
3536 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.042 | 0 restraints |
wR(F2) = 0.109 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | Δρmax = 0.46 e Å−3 |
3536 reflections | Δρmin = −0.37 e Å−3 |
183 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S | 0.72056 (4) | 0.74709 (4) | 0.66517 (4) | 0.01288 (11) | |
O1 | 0.73513 (12) | 0.63104 (13) | 0.73690 (13) | 0.0188 (3) | |
O2 | 0.69106 (12) | 0.86147 (12) | 0.71433 (13) | 0.0189 (3) | |
O3 | 0.98574 (12) | 0.85716 (12) | 0.91026 (12) | 0.0152 (3) | |
O4 | 0.94016 (12) | 1.05851 (11) | 0.84208 (12) | 0.0149 (3) | |
O5 | 0.78235 (12) | 0.53798 (12) | 0.52256 (14) | 0.0204 (3) | |
O6 | 0.62615 (13) | 0.40202 (12) | 0.44478 (14) | 0.0227 (3) | |
N1 | 0.84935 (14) | 0.77553 (14) | 0.65117 (15) | 0.0147 (3) | |
N2 | 0.66683 (14) | 0.50992 (14) | 0.46771 (15) | 0.0146 (3) | |
C1 | 0.94529 (15) | 0.94668 (16) | 0.81806 (16) | 0.0121 (3) | |
C2 | 0.91241 (16) | 0.89947 (16) | 0.67511 (16) | 0.0131 (3) | |
C3 | 0.59119 (16) | 0.72314 (16) | 0.49805 (16) | 0.0129 (3) | |
C4 | 0.49572 (17) | 0.81608 (17) | 0.44523 (18) | 0.0165 (3) | |
H4 | 0.5051 | 0.8910 | 0.4956 | 0.020* | |
C5 | 0.38713 (17) | 0.80018 (19) | 0.31969 (19) | 0.0200 (4) | |
H5 | 0.3241 | 0.8652 | 0.2840 | 0.024* | |
C6 | 0.37020 (17) | 0.69041 (19) | 0.24650 (18) | 0.0198 (4) | |
H6 | 0.296 | 0.6804 | 0.1605 | 0.024* | |
C7 | 0.46168 (16) | 0.59461 (18) | 0.29862 (17) | 0.0168 (4) | |
H7 | 0.4492 | 0.5178 | 0.2502 | 0.020* | |
C8 | 0.57152 (16) | 0.61270 (16) | 0.42241 (17) | 0.0134 (3) | |
C9 | 1.04188 (17) | 0.87881 (18) | 0.6737 (2) | 0.0189 (4) | |
H9A | 1.0929 | 0.8158 | 0.7424 | 0.028* | |
H9B | 1.0899 | 0.9584 | 0.6942 | 0.028* | |
H9C | 1.0256 | 0.8490 | 0.5837 | 0.028* | |
C10 | 0.82947 (18) | 0.99529 (18) | 0.56642 (18) | 0.0191 (4) | |
H10A | 0.8111 | 0.9634 | 0.4765 | 0.029* | |
H10B | 0.8763 | 1.0754 | 0.5835 | 0.029* | |
H10C | 0.7478 | 1.0085 | 0.5696 | 0.029* | |
H3O | 1.010 (3) | 0.894 (3) | 0.991 (3) | 0.053 (9)* | |
H1N | 0.887 (2) | 0.716 (2) | 0.648 (3) | 0.034 (7)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S | 0.01306 (19) | 0.0156 (2) | 0.01038 (19) | −0.00238 (15) | 0.00576 (15) | −0.00250 (15) |
O1 | 0.0188 (6) | 0.0226 (7) | 0.0142 (6) | −0.0027 (5) | 0.0071 (5) | 0.0032 (5) |
O2 | 0.0184 (6) | 0.0227 (7) | 0.0172 (6) | −0.0025 (5) | 0.0097 (5) | −0.0081 (5) |
O3 | 0.0194 (6) | 0.0140 (6) | 0.0105 (6) | −0.0020 (5) | 0.0055 (5) | −0.0017 (5) |
O4 | 0.0181 (6) | 0.0134 (6) | 0.0116 (6) | 0.0001 (5) | 0.0054 (5) | −0.0013 (5) |
O5 | 0.0135 (6) | 0.0189 (6) | 0.0243 (7) | 0.0004 (5) | 0.0050 (5) | −0.0030 (5) |
O6 | 0.0277 (7) | 0.0129 (6) | 0.0289 (7) | −0.0044 (5) | 0.0145 (6) | −0.0041 (5) |
N1 | 0.0144 (7) | 0.0138 (7) | 0.0174 (7) | −0.0035 (5) | 0.0085 (6) | −0.0057 (6) |
N2 | 0.0173 (7) | 0.0150 (7) | 0.0130 (7) | −0.0008 (5) | 0.0084 (6) | −0.0026 (5) |
C1 | 0.0105 (7) | 0.0145 (8) | 0.0107 (7) | −0.0017 (6) | 0.0045 (6) | −0.0008 (6) |
C2 | 0.0150 (7) | 0.0140 (8) | 0.0097 (7) | −0.0030 (6) | 0.0053 (6) | −0.0023 (6) |
C3 | 0.0119 (7) | 0.0151 (8) | 0.0108 (7) | −0.0020 (6) | 0.0044 (6) | −0.0006 (6) |
C4 | 0.0170 (8) | 0.0154 (8) | 0.0177 (8) | −0.0005 (6) | 0.0086 (7) | −0.0006 (7) |
C5 | 0.0153 (8) | 0.0228 (9) | 0.0198 (9) | 0.0042 (7) | 0.0065 (7) | 0.0039 (7) |
C6 | 0.0137 (8) | 0.0299 (10) | 0.0125 (8) | −0.0019 (7) | 0.0034 (6) | −0.0007 (7) |
C7 | 0.0159 (8) | 0.0213 (9) | 0.0136 (8) | −0.0043 (6) | 0.0072 (7) | −0.0041 (7) |
C8 | 0.0138 (7) | 0.0131 (7) | 0.0143 (7) | −0.0014 (6) | 0.0074 (6) | −0.0003 (6) |
C9 | 0.0186 (8) | 0.0201 (9) | 0.0217 (9) | −0.0042 (7) | 0.0126 (7) | −0.0057 (7) |
C10 | 0.0257 (9) | 0.0186 (9) | 0.0115 (8) | −0.0004 (7) | 0.0075 (7) | −0.0002 (7) |
Geometric parameters (Å, º) top
S—O1 | 1.4338 (13) | C3—C8 | 1.398 (2) |
S—O2 | 1.4376 (13) | C4—C5 | 1.390 (3) |
S—N1 | 1.6096 (16) | C4—H4 | 0.95 |
S—C3 | 1.7832 (18) | C5—C6 | 1.382 (3) |
O3—C1 | 1.314 (2) | C5—H5 | 0.95 |
O3—H3O | 0.90 (3) | C6—C7 | 1.390 (3) |
O4—C1 | 1.224 (2) | C6—H6 | 0.95 |
O5—N2 | 1.2287 (18) | C7—C8 | 1.389 (2) |
O6—N2 | 1.2203 (19) | C7—H7 | 0.95 |
N1—C2 | 1.470 (2) | C9—H9A | 0.98 |
N1—H1N | 0.78 (3) | C9—H9B | 0.98 |
N2—C8 | 1.469 (2) | C9—H9C | 0.98 |
C1—C2 | 1.535 (2) | C10—H10A | 0.98 |
C2—C10 | 1.530 (2) | C10—H10B | 0.98 |
C2—C9 | 1.533 (2) | C10—H10C | 0.98 |
C3—C4 | 1.396 (2) | | |
| | | |
O1—S—O2 | 120.08 (8) | C5—C4—H4 | 119.6 |
O1—S—N1 | 109.95 (8) | C3—C4—H4 | 119.6 |
O2—S—N1 | 106.15 (8) | C6—C5—C4 | 120.46 (17) |
O1—S—C3 | 106.29 (8) | C6—C5—H5 | 119.8 |
O2—S—C3 | 106.28 (8) | C4—C5—H5 | 119.8 |
N1—S—C3 | 107.47 (8) | C5—C6—C7 | 120.02 (16) |
C1—O3—H3O | 107.2 (19) | C5—C6—H6 | 120 |
C2—N1—S | 124.14 (12) | C7—C6—H6 | 120 |
C2—N1—H1N | 119.4 (19) | C8—C7—C6 | 119.09 (17) |
S—N1—H1N | 115.0 (19) | C8—C7—H7 | 120.5 |
O6—N2—O5 | 124.11 (15) | C6—C7—H7 | 120.5 |
O6—N2—C8 | 117.84 (14) | C7—C8—C3 | 121.94 (16) |
O5—N2—C8 | 118.01 (14) | C7—C8—N2 | 115.99 (15) |
O4—C1—O3 | 124.56 (16) | C3—C8—N2 | 122.06 (15) |
O4—C1—C2 | 121.90 (15) | C2—C9—H9A | 109.5 |
O3—C1—C2 | 113.42 (14) | C2—C9—H9B | 109.5 |
N1—C2—C10 | 111.92 (14) | H9A—C9—H9B | 109.5 |
N1—C2—C9 | 106.39 (14) | C2—C9—H9C | 109.5 |
C10—C2—C9 | 110.50 (15) | H9A—C9—H9C | 109.5 |
N1—C2—C1 | 110.00 (14) | H9B—C9—H9C | 109.5 |
C10—C2—C1 | 111.20 (14) | C2—C10—H10A | 109.5 |
C9—C2—C1 | 106.58 (14) | C2—C10—H10B | 109.5 |
C4—C3—C8 | 117.68 (15) | H10A—C10—H10B | 109.5 |
C4—C3—S | 117.33 (13) | C2—C10—H10C | 109.5 |
C8—C3—S | 124.63 (13) | H10A—C10—H10C | 109.5 |
C5—C4—C3 | 120.75 (17) | H10B—C10—H10C | 109.5 |
| | | |
O1—S—N1—C2 | −135.75 (14) | N1—S—C3—C8 | 77.28 (16) |
O2—S—N1—C2 | −4.43 (16) | C8—C3—C4—C5 | −2.0 (3) |
C3—S—N1—C2 | 108.97 (15) | S—C3—C4—C5 | −175.44 (14) |
S—N1—C2—C10 | −68.35 (19) | C3—C4—C5—C6 | 1.7 (3) |
S—N1—C2—C9 | 170.86 (12) | C4—C5—C6—C7 | 0.4 (3) |
S—N1—C2—C1 | 55.80 (19) | C5—C6—C7—C8 | −2.1 (3) |
O4—C1—C2—N1 | −145.24 (16) | C6—C7—C8—C3 | 1.8 (3) |
O3—C1—C2—N1 | 38.50 (19) | C6—C7—C8—N2 | −177.08 (16) |
O4—C1—C2—C10 | −20.7 (2) | C4—C3—C8—C7 | 0.2 (2) |
O3—C1—C2—C10 | 163.06 (14) | S—C3—C8—C7 | 173.18 (14) |
O4—C1—C2—C9 | 99.81 (18) | C4—C3—C8—N2 | 179.02 (15) |
O3—C1—C2—C9 | −76.45 (17) | S—C3—C8—N2 | −8.0 (2) |
O1—S—C3—C4 | 132.56 (14) | O6—N2—C8—C7 | −37.5 (2) |
O2—S—C3—C4 | 3.56 (16) | O5—N2—C8—C7 | 140.35 (16) |
N1—S—C3—C4 | −109.76 (14) | O6—N2—C8—C3 | 143.65 (17) |
O1—S—C3—C8 | −40.41 (16) | O5—N2—C8—C3 | −38.5 (2) |
O2—S—C3—C8 | −169.41 (14) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3O···O4i | 0.90 (3) | 1.74 (3) | 2.629 (2) | 171 (3) |
N1—H1N···O5 | 0.78 (3) | 2.32 (3) | 2.823 (2) | 123 (2) |
N1—H1N···O4ii | 0.78 (3) | 2.58 (3) | 3.342 (2) | 165 (2) |
Symmetry codes: (i) −x+2, −y+2, −z+2; (ii) −x+2, y−1/2, −z+3/2. |
(II)
N-(2-nitrobenzenesulfonyl)-1-amino-1-cyclohexane carboxylic acid
top
Crystal data top
C13H16N2O6S | F(000) = 1376 |
Mr = 328.34 | Dx = 1.479 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 15.9780 (12) Å | Cell parameters from 25 reflections |
b = 14.9840 (11) Å | θ = 10.6–21.2° |
c = 13.436 (1) Å | µ = 0.25 mm−1 |
β = 113.568 (6)° | T = 100 K |
V = 2948.4 (4) Å3 | Fragment, colorless |
Z = 8 | 0.55 × 0.42 × 0.35 mm |
Data collection top
Enraf-Nonius CAD4 (with Oxford Cryostream) diffractometer | 5772 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.033 |
Graphite monochromator | θmax = 29.0°, θmin = 2.1° |
ω–2θ scans | h = 0→21 |
Absorption correction: ψ scan (North et al., 1968) | k = −20→20 |
Tmin = 0.887, Tmax = 0.916 | l = −18→16 |
9183 measured reflections | 3 standard reflections every 60 min |
7815 independent reflections | intensity decay: 2.7% |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.116 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0311P)2 + 2.1884P] where P = (Fo2 + 2Fc2)/3 |
7815 reflections | (Δ/σ)max = 0.001 |
413 parameters | Δρmax = 0.63 e Å−3 |
0 restraints | Δρmin = −0.61 e Å−3 |
Crystal data top
C13H16N2O6S | V = 2948.4 (4) Å3 |
Mr = 328.34 | Z = 8 |
Monoclinic, P21/c | Mo Kα radiation |
a = 15.9780 (12) Å | µ = 0.25 mm−1 |
b = 14.9840 (11) Å | T = 100 K |
c = 13.436 (1) Å | 0.55 × 0.42 × 0.35 mm |
β = 113.568 (6)° | |
Data collection top
Enraf-Nonius CAD4 (with Oxford Cryostream) diffractometer | 5772 reflections with I > 2σ(I) |
Absorption correction: ψ scan (North et al., 1968) | Rint = 0.033 |
Tmin = 0.887, Tmax = 0.916 | 3 standard reflections every 60 min |
9183 measured reflections | intensity decay: 2.7% |
7815 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.116 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | Δρmax = 0.63 e Å−3 |
7815 reflections | Δρmin = −0.61 e Å−3 |
413 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.09596 (3) | 0.97588 (3) | 0.32063 (4) | 0.01886 (11) | |
O1 | 0.07698 (10) | 0.95375 (10) | 0.21026 (12) | 0.0263 (3) | |
O2 | 0.06725 (10) | 0.91675 (10) | 0.38543 (13) | 0.0253 (3) | |
O3 | 0.24607 (11) | 0.81592 (10) | 0.40654 (12) | 0.0231 (3) | |
H3O | 0.241 (2) | 0.760 (2) | 0.413 (2) | 0.055 (10)* | |
O4 | 0.24094 (10) | 0.81240 (9) | 0.57073 (11) | 0.0214 (3) | |
O5 | 0.14870 (10) | 1.12141 (11) | 0.19518 (12) | 0.0257 (3) | |
O6 | 0.01772 (13) | 1.15342 (15) | 0.06488 (13) | 0.0448 (5) | |
N1 | 0.20410 (11) | 0.99212 (11) | 0.38608 (14) | 0.0177 (3) | |
H1N | 0.2302 (18) | 1.0027 (18) | 0.345 (2) | 0.032 (7)* | |
N2 | 0.06654 (12) | 1.13870 (12) | 0.15986 (14) | 0.0241 (4) | |
C1 | 0.24585 (12) | 0.85404 (13) | 0.49489 (16) | 0.0173 (4) | |
C2 | 0.25654 (13) | 0.95561 (13) | 0.49575 (15) | 0.0170 (4) | |
C3 | 0.04003 (12) | 1.07902 (13) | 0.31794 (16) | 0.0172 (4) | |
C4 | 0.00172 (14) | 1.09270 (15) | 0.39323 (18) | 0.0245 (4) | |
H4 | 0.0113 | 1.0496 | 0.4486 | 0.029* | |
C5 | −0.05019 (14) | 1.16799 (15) | 0.38932 (18) | 0.0259 (4) | |
H5 | −0.0745 | 1.1767 | 0.4426 | 0.031* | |
C6 | −0.06639 (13) | 1.23023 (14) | 0.30794 (17) | 0.0210 (4) | |
H6 | −0.1031 | 1.2811 | 0.3041 | 0.025* | |
C7 | −0.02901 (13) | 1.21842 (13) | 0.23183 (16) | 0.0203 (4) | |
H7 | −0.0401 | 1.2609 | 0.1755 | 0.024* | |
C8 | 0.02452 (13) | 1.14433 (13) | 0.23865 (15) | 0.0166 (4) | |
C9 | 0.35848 (13) | 0.97477 (14) | 0.52258 (17) | 0.0215 (4) | |
H9A | 0.3966 | 0.9447 | 0.5915 | 0.026* | |
H9B | 0.3747 | 0.9498 | 0.4645 | 0.026* | |
C10 | 0.22940 (14) | 0.99947 (13) | 0.58202 (17) | 0.0215 (4) | |
H10A | 0.1636 | 0.9894 | 0.5631 | 0.026* | |
H10B | 0.2640 | 0.9714 | 0.6535 | 0.026* | |
C11 | 0.37919 (14) | 1.07499 (14) | 0.53325 (18) | 0.0256 (4) | |
H11A | 0.4456 | 1.0841 | 0.5559 | 0.031* | |
H11B | 0.3475 | 1.1038 | 0.4616 | 0.031* | |
C12 | 0.34900 (16) | 1.11890 (16) | 0.61550 (18) | 0.0302 (5) | |
H12A | 0.3584 | 1.1842 | 0.6152 | 0.036* | |
H12B | 0.3870 | 1.0963 | 0.6891 | 0.036* | |
C13 | 0.24882 (15) | 1.09985 (14) | 0.58985 (18) | 0.0259 (4) | |
H13A | 0.2104 | 1.1287 | 0.5202 | 0.031* | |
H13B | 0.2325 | 1.1259 | 0.6474 | 0.031* | |
S1' | 0.39312 (3) | 0.48665 (3) | 0.68607 (4) | 0.01874 (11) | |
O1' | 0.39760 (11) | 0.49706 (10) | 0.79381 (12) | 0.0277 (3) | |
O2' | 0.42115 (10) | 0.55820 (10) | 0.63517 (13) | 0.0258 (3) | |
O3' | 0.23298 (11) | 0.63264 (10) | 0.58293 (12) | 0.0233 (3) | |
H3O' | 0.231 (2) | 0.691 (2) | 0.573 (2) | 0.054 (9)* | |
O4' | 0.23567 (10) | 0.64204 (9) | 0.41800 (11) | 0.0223 (3) | |
O5' | 0.34019 (10) | 0.31660 (11) | 0.77393 (12) | 0.0268 (3) | |
O6' | 0.46285 (12) | 0.27744 (12) | 0.91166 (13) | 0.0334 (4) | |
N1' | 0.29094 (11) | 0.46090 (11) | 0.60551 (13) | 0.0172 (3) | |
H1N' | 0.2599 (18) | 0.4333 (18) | 0.632 (2) | 0.033 (7)* | |
N2' | 0.42296 (12) | 0.30432 (11) | 0.81867 (14) | 0.0224 (4) | |
C1' | 0.23842 (12) | 0.59795 (13) | 0.49588 (16) | 0.0176 (4) | |
C2' | 0.24470 (13) | 0.49593 (12) | 0.49482 (15) | 0.0161 (4) | |
C3' | 0.46525 (13) | 0.39516 (13) | 0.68908 (16) | 0.0189 (4) | |
C4' | 0.51743 (13) | 0.40143 (15) | 0.62783 (18) | 0.0248 (4) | |
H4' | 0.5119 | 0.4528 | 0.5841 | 0.030* | |
C5' | 0.57751 (15) | 0.33409 (16) | 0.6293 (2) | 0.0302 (5) | |
H5' | 0.6109 | 0.3387 | 0.5849 | 0.036* | |
C6' | 0.58903 (14) | 0.25994 (15) | 0.69563 (19) | 0.0277 (5) | |
H6' | 0.6304 | 0.2140 | 0.6968 | 0.033* | |
C7' | 0.53985 (14) | 0.25345 (14) | 0.75990 (18) | 0.0243 (4) | |
H7' | 0.5486 | 0.2040 | 0.8072 | 0.029* | |
C8' | 0.47783 (13) | 0.31967 (13) | 0.75465 (16) | 0.0182 (4) | |
C9' | 0.14586 (13) | 0.45971 (14) | 0.45016 (16) | 0.0201 (4) | |
H9'1 | 0.1178 | 0.4742 | 0.5019 | 0.024* | |
H9'2 | 0.1096 | 0.4896 | 0.3804 | 0.024* | |
C10' | 0.29091 (14) | 0.46655 (13) | 0.41918 (16) | 0.0197 (4) | |
H10C | 0.2601 | 0.4960 | 0.3478 | 0.024* | |
H10D | 0.3554 | 0.4864 | 0.4503 | 0.024* | |
C11' | 0.14241 (14) | 0.35880 (14) | 0.43242 (18) | 0.0241 (4) | |
H11C | 0.1723 | 0.3285 | 0.5035 | 0.029* | |
H11D | 0.0779 | 0.3392 | 0.3997 | 0.029* | |
C12' | 0.18975 (15) | 0.33127 (15) | 0.35862 (18) | 0.0263 (5) | |
H12C | 0.1898 | 0.2654 | 0.3531 | 0.032* | |
H12D | 0.1557 | 0.3557 | 0.2849 | 0.032* | |
C13' | 0.28770 (14) | 0.36558 (14) | 0.40289 (18) | 0.0230 (4) | |
H13C | 0.3159 | 0.3502 | 0.3516 | 0.028* | |
H13D | 0.3234 | 0.3361 | 0.4731 | 0.028* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0155 (2) | 0.0109 (2) | 0.0234 (2) | −0.00006 (17) | 0.00072 (18) | 0.00085 (18) |
O1 | 0.0237 (7) | 0.0180 (7) | 0.0255 (8) | 0.0024 (6) | −0.0023 (6) | −0.0046 (6) |
O2 | 0.0182 (7) | 0.0142 (7) | 0.0367 (9) | −0.0004 (6) | 0.0038 (6) | 0.0074 (6) |
O3 | 0.0322 (8) | 0.0151 (7) | 0.0228 (7) | 0.0032 (6) | 0.0118 (6) | 0.0021 (6) |
O4 | 0.0261 (7) | 0.0155 (7) | 0.0237 (7) | 0.0038 (6) | 0.0112 (6) | 0.0044 (6) |
O5 | 0.0223 (7) | 0.0281 (8) | 0.0276 (8) | 0.0021 (6) | 0.0110 (6) | 0.0002 (6) |
O6 | 0.0444 (11) | 0.0687 (14) | 0.0205 (8) | 0.0264 (10) | 0.0123 (8) | 0.0153 (8) |
N1 | 0.0154 (8) | 0.0156 (8) | 0.0184 (8) | 0.0014 (6) | 0.0030 (6) | 0.0037 (6) |
N2 | 0.0261 (9) | 0.0240 (9) | 0.0219 (9) | 0.0065 (7) | 0.0094 (7) | 0.0046 (7) |
C1 | 0.0129 (8) | 0.0161 (9) | 0.0204 (9) | 0.0048 (7) | 0.0040 (7) | 0.0030 (7) |
C2 | 0.0148 (8) | 0.0145 (9) | 0.0179 (9) | 0.0020 (7) | 0.0026 (7) | 0.0025 (7) |
C3 | 0.0121 (8) | 0.0147 (9) | 0.0212 (9) | −0.0007 (7) | 0.0028 (7) | 0.0006 (7) |
C4 | 0.0214 (10) | 0.0242 (11) | 0.0303 (11) | 0.0042 (8) | 0.0129 (9) | 0.0104 (9) |
C5 | 0.0214 (10) | 0.0284 (11) | 0.0311 (11) | 0.0027 (9) | 0.0140 (9) | 0.0045 (9) |
C6 | 0.0156 (9) | 0.0163 (9) | 0.0285 (10) | 0.0021 (7) | 0.0060 (8) | −0.0001 (8) |
C7 | 0.0194 (9) | 0.0148 (9) | 0.0232 (10) | 0.0017 (7) | 0.0050 (8) | 0.0044 (7) |
C8 | 0.0156 (8) | 0.0149 (9) | 0.0175 (9) | −0.0014 (7) | 0.0046 (7) | 0.0003 (7) |
C9 | 0.0143 (9) | 0.0232 (10) | 0.0222 (10) | 0.0011 (8) | 0.0024 (8) | 0.0029 (8) |
C10 | 0.0224 (10) | 0.0181 (10) | 0.0230 (10) | 0.0012 (8) | 0.0081 (8) | −0.0012 (8) |
C11 | 0.0184 (9) | 0.0234 (11) | 0.0285 (11) | −0.0057 (8) | 0.0027 (8) | 0.0026 (9) |
C12 | 0.0316 (12) | 0.0230 (11) | 0.0275 (11) | −0.0081 (9) | 0.0030 (9) | −0.0039 (9) |
C13 | 0.0304 (11) | 0.0183 (10) | 0.0267 (11) | −0.0017 (9) | 0.0090 (9) | −0.0054 (8) |
S1' | 0.0185 (2) | 0.0112 (2) | 0.0201 (2) | −0.00045 (17) | 0.00089 (18) | −0.00002 (17) |
O1' | 0.0337 (9) | 0.0224 (8) | 0.0192 (7) | 0.0030 (6) | 0.0022 (6) | −0.0057 (6) |
O2' | 0.0215 (7) | 0.0129 (7) | 0.0344 (8) | −0.0038 (6) | 0.0024 (6) | 0.0045 (6) |
O3' | 0.0348 (8) | 0.0144 (7) | 0.0238 (7) | 0.0040 (6) | 0.0149 (7) | 0.0011 (6) |
O4' | 0.0292 (8) | 0.0148 (7) | 0.0224 (7) | 0.0032 (6) | 0.0099 (6) | 0.0035 (6) |
O5' | 0.0213 (7) | 0.0271 (8) | 0.0303 (8) | 0.0018 (6) | 0.0087 (6) | 0.0061 (7) |
O6' | 0.0386 (9) | 0.0337 (9) | 0.0248 (8) | 0.0096 (8) | 0.0096 (7) | 0.0139 (7) |
N1' | 0.0158 (8) | 0.0157 (8) | 0.0183 (8) | −0.0020 (6) | 0.0048 (6) | 0.0043 (6) |
N2' | 0.0273 (9) | 0.0158 (8) | 0.0223 (8) | 0.0018 (7) | 0.0080 (7) | 0.0047 (7) |
C1' | 0.0126 (8) | 0.0164 (9) | 0.0215 (9) | 0.0027 (7) | 0.0045 (7) | 0.0019 (7) |
C2' | 0.0160 (8) | 0.0133 (9) | 0.0169 (9) | 0.0017 (7) | 0.0045 (7) | 0.0021 (7) |
C3' | 0.0129 (8) | 0.0156 (9) | 0.0217 (9) | −0.0015 (7) | −0.0001 (7) | −0.0006 (7) |
C4' | 0.0160 (9) | 0.0251 (11) | 0.0301 (11) | −0.0002 (8) | 0.0058 (8) | 0.0084 (9) |
C5' | 0.0202 (10) | 0.0342 (13) | 0.0378 (13) | 0.0025 (9) | 0.0134 (9) | 0.0037 (10) |
C6' | 0.0185 (10) | 0.0251 (11) | 0.0355 (12) | 0.0030 (8) | 0.0068 (9) | −0.0021 (9) |
C7' | 0.0205 (10) | 0.0167 (9) | 0.0285 (11) | 0.0011 (8) | 0.0022 (8) | 0.0013 (8) |
C8' | 0.0161 (9) | 0.0141 (9) | 0.0199 (9) | −0.0021 (7) | 0.0026 (7) | 0.0004 (7) |
C9' | 0.0137 (8) | 0.0213 (10) | 0.0224 (10) | 0.0002 (7) | 0.0041 (7) | 0.0006 (8) |
C10' | 0.0207 (9) | 0.0167 (9) | 0.0222 (10) | 0.0018 (7) | 0.0092 (8) | 0.0009 (7) |
C11' | 0.0230 (10) | 0.0215 (10) | 0.0258 (10) | −0.0072 (8) | 0.0076 (8) | −0.0051 (8) |
C12' | 0.0284 (11) | 0.0232 (11) | 0.0258 (11) | −0.0045 (9) | 0.0093 (9) | −0.0078 (9) |
C13' | 0.0258 (10) | 0.0166 (9) | 0.0274 (11) | 0.0006 (8) | 0.0114 (9) | −0.0033 (8) |
Geometric parameters (Å, º) top
S1—O1 | 1.4287 (16) | S1'—O1' | 1.4290 (15) |
S1—O2 | 1.4397 (15) | S1'—O2' | 1.4363 (15) |
S1—N1 | 1.6134 (17) | S1'—N1' | 1.6041 (17) |
S1—C3 | 1.778 (2) | S1'—C3' | 1.781 (2) |
O3—C1 | 1.319 (2) | O3'—C1' | 1.314 (2) |
O3—H3O | 0.85 (3) | O3'—H3O' | 0.89 (3) |
O4—C1 | 1.224 (2) | O4'—C1' | 1.223 (2) |
O5—N2 | 1.232 (2) | O5'—N2' | 1.228 (2) |
O6—N2 | 1.221 (2) | O6'—N2' | 1.222 (2) |
N1—C2 | 1.478 (2) | N1'—C2' | 1.468 (2) |
N1—H1N | 0.83 (3) | N1'—H1N' | 0.83 (3) |
N2—C8 | 1.465 (3) | N2'—C8' | 1.471 (3) |
C1—C2 | 1.531 (3) | C1'—C2' | 1.532 (3) |
C2—C10 | 1.538 (3) | C2'—C10' | 1.540 (3) |
C2—C9 | 1.548 (3) | C2'—C9' | 1.546 (3) |
C3—C4 | 1.391 (3) | C3'—C4' | 1.389 (3) |
C3—C8 | 1.394 (3) | C3'—C8' | 1.398 (3) |
C4—C5 | 1.389 (3) | C4'—C5' | 1.387 (3) |
C4—H4 | 0.9500 | C4'—H4' | 0.9500 |
C5—C6 | 1.381 (3) | C5'—C6' | 1.389 (3) |
C5—H5 | 0.9500 | C5'—H5' | 0.9500 |
C6—C7 | 1.386 (3) | C6'—C7' | 1.384 (3) |
C6—H6 | 0.9500 | C6'—H6' | 0.9500 |
C7—C8 | 1.382 (3) | C7'—C8' | 1.384 (3) |
C7—H7 | 0.9500 | C7'—H7' | 0.9500 |
C9—C11 | 1.532 (3) | C9'—C11' | 1.528 (3) |
C9—H9A | 0.9900 | C9'—H9'1 | 0.9900 |
C9—H9B | 0.9900 | C9'—H9'2 | 0.9900 |
C10—C13 | 1.531 (3) | C10'—C13' | 1.527 (3) |
C10—H10A | 0.9900 | C10'—H10C | 0.9900 |
C10—H10B | 0.9900 | C10'—H10D | 0.9900 |
C11—C12 | 1.521 (3) | C11'—C12' | 1.525 (3) |
C11—H11A | 0.9900 | C11'—H11C | 0.9900 |
C11—H11B | 0.9900 | C11'—H11D | 0.9900 |
C12—C13 | 1.524 (3) | C12'—C13' | 1.524 (3) |
C12—H12A | 0.9900 | C12'—H12C | 0.9900 |
C12—H12B | 0.9900 | C12'—H12D | 0.9900 |
C13—H13A | 0.9900 | C13'—H13C | 0.9900 |
C13—H13B | 0.9900 | C13'—H13D | 0.9900 |
| | | |
O1—S1—O2 | 119.88 (10) | O1'—S1'—O2' | 120.14 (10) |
O1—S1—N1 | 109.71 (10) | O1'—S1'—N1' | 109.58 (9) |
O2—S1—N1 | 107.09 (9) | O2'—S1'—N1' | 106.57 (9) |
O1—S1—C3 | 106.51 (9) | O1'—S1'—C3' | 106.93 (9) |
O2—S1—C3 | 105.55 (9) | O2'—S1'—C3' | 105.26 (10) |
N1—S1—C3 | 107.46 (9) | N1'—S1'—C3' | 107.76 (9) |
C1—O3—H3O | 108 (2) | C1'—O3'—H3O' | 105 (2) |
C2—N1—S1 | 122.97 (14) | C2'—N1'—S1' | 124.19 (13) |
C2—N1—H1N | 120.0 (19) | C2'—N1'—H1N' | 117.9 (18) |
S1—N1—H1N | 112.2 (18) | S1'—N1'—H1N' | 117.1 (18) |
O6—N2—O5 | 125.31 (19) | O6'—N2'—O5' | 124.70 (18) |
O6—N2—C8 | 117.33 (17) | O6'—N2'—C8' | 117.40 (17) |
O5—N2—C8 | 117.34 (17) | O5'—N2'—C8' | 117.85 (16) |
O4—C1—O3 | 123.57 (18) | O4'—C1'—O3' | 123.72 (18) |
O4—C1—C2 | 123.00 (18) | O4'—C1'—C2' | 120.72 (18) |
O3—C1—C2 | 113.38 (17) | O3'—C1'—C2' | 115.52 (17) |
N1—C2—C1 | 110.08 (16) | N1'—C2'—C1' | 110.83 (16) |
N1—C2—C10 | 112.02 (16) | N1'—C2'—C10' | 112.74 (15) |
C1—C2—C10 | 111.48 (16) | C1'—C2'—C10' | 109.98 (16) |
N1—C2—C9 | 106.73 (16) | N1'—C2'—C9' | 106.85 (15) |
C1—C2—C9 | 106.86 (15) | C1'—C2'—C9' | 107.06 (15) |
C10—C2—C9 | 109.44 (16) | C10'—C2'—C9' | 109.17 (16) |
C4—C3—C8 | 117.19 (18) | C4'—C3'—C8' | 117.32 (18) |
C4—C3—S1 | 118.49 (15) | C4'—C3'—S1' | 118.08 (16) |
C8—C3—S1 | 124.05 (15) | C8'—C3'—S1' | 124.45 (16) |
C5—C4—C3 | 121.46 (19) | C5'—C4'—C3' | 121.2 (2) |
C5—C4—H4 | 119.3 | C5'—C4'—H4' | 119.4 |
C3—C4—H4 | 119.3 | C3'—C4'—H4' | 119.4 |
C6—C5—C4 | 119.9 (2) | C4'—C5'—C6' | 120.3 (2) |
C6—C5—H5 | 120.0 | C4'—C5'—H5' | 119.8 |
C4—C5—H5 | 120.0 | C6'—C5'—H5' | 119.8 |
C5—C6—C7 | 119.89 (19) | C7'—C6'—C5' | 119.6 (2) |
C5—C6—H6 | 120.1 | C7'—C6'—H6' | 120.2 |
C7—C6—H6 | 120.1 | C5'—C6'—H6' | 120.2 |
C8—C7—C6 | 119.44 (18) | C6'—C7'—C8' | 119.4 (2) |
C8—C7—H7 | 120.3 | C6'—C7'—H7' | 120.3 |
C6—C7—H7 | 120.3 | C8'—C7'—H7' | 120.3 |
C7—C8—C3 | 122.05 (18) | C7'—C8'—C3' | 122.13 (19) |
C7—C8—N2 | 116.66 (17) | C7'—C8'—N2' | 116.10 (17) |
C3—C8—N2 | 121.26 (17) | C3'—C8'—N2' | 121.73 (17) |
C11—C9—C2 | 111.80 (17) | C11'—C9'—C2' | 112.05 (16) |
C11—C9—H9A | 109.3 | C11'—C9'—H9'1 | 109.2 |
C2—C9—H9A | 109.3 | C2'—C9'—H9'1 | 109.2 |
C11—C9—H9B | 109.3 | C11'—C9'—H9'2 | 109.2 |
C2—C9—H9B | 109.3 | C2'—C9'—H9'2 | 109.2 |
H9A—C9—H9B | 107.9 | H9'1—C9'—H9'2 | 107.9 |
C13—C10—C2 | 111.17 (17) | C13'—C10'—C2' | 112.35 (16) |
C13—C10—H10A | 109.4 | C13'—C10'—H10C | 109.1 |
C2—C10—H10A | 109.4 | C2'—C10'—H10C | 109.1 |
C13—C10—H10B | 109.4 | C13'—C10'—H10D | 109.1 |
C2—C10—H10B | 109.4 | C2'—C10'—H10D | 109.1 |
H10A—C10—H10B | 108.0 | H10C—C10'—H10D | 107.9 |
C12—C11—C9 | 111.87 (18) | C12'—C11'—C9' | 111.88 (18) |
C12—C11—H11A | 109.2 | C12'—C11'—H11C | 109.2 |
C9—C11—H11A | 109.2 | C9'—C11'—H11C | 109.2 |
C12—C11—H11B | 109.2 | C12'—C11'—H11D | 109.2 |
C9—C11—H11B | 109.2 | C9'—C11'—H11D | 109.2 |
H11A—C11—H11B | 107.9 | H11C—C11'—H11D | 107.9 |
C11—C12—C13 | 111.37 (18) | C13'—C12'—C11' | 110.72 (17) |
C11—C12—H12A | 109.4 | C13'—C12'—H12C | 109.5 |
C13—C12—H12A | 109.4 | C11'—C12'—H12C | 109.5 |
C11—C12—H12B | 109.4 | C13'—C12'—H12D | 109.5 |
C13—C12—H12B | 109.4 | C11'—C12'—H12D | 109.5 |
H12A—C12—H12B | 108.0 | H12C—C12'—H12D | 108.1 |
C12—C13—C10 | 111.43 (18) | C12'—C13'—C10' | 111.14 (18) |
C12—C13—H13A | 109.3 | C12'—C13'—H13C | 109.4 |
C10—C13—H13A | 109.3 | C10'—C13'—H13C | 109.4 |
C12—C13—H13B | 109.3 | C12'—C13'—H13D | 109.4 |
C10—C13—H13B | 109.3 | C10'—C13'—H13D | 109.4 |
H13A—C13—H13B | 108.0 | H13C—C13'—H13D | 108.0 |
| | | |
O1—S1—N1—C2 | −135.74 (16) | O1'—S1'—N1'—C2' | 140.35 (16) |
O2—S1—N1—C2 | −4.15 (18) | O2'—S1'—N1'—C2' | 8.92 (18) |
C3—S1—N1—C2 | 108.84 (16) | C3'—S1'—N1'—C2' | −103.64 (17) |
S1—N1—C2—C1 | 56.7 (2) | S1'—N1'—C2'—C1' | −59.4 (2) |
S1—N1—C2—C10 | −67.9 (2) | S1'—N1'—C2'—C10' | 64.3 (2) |
S1—N1—C2—C9 | 172.30 (14) | S1'—N1'—C2'—C9' | −175.73 (13) |
O4—C1—C2—N1 | −143.38 (18) | O4'—C1'—C2'—N1' | 152.01 (17) |
O3—C1—C2—N1 | 39.1 (2) | O3'—C1'—C2'—N1' | −30.4 (2) |
O4—C1—C2—C10 | −18.4 (3) | O4'—C1'—C2'—C10' | 26.7 (2) |
O3—C1—C2—C10 | 164.06 (16) | O3'—C1'—C2'—C10' | −155.69 (16) |
O4—C1—C2—C9 | 101.1 (2) | O4'—C1'—C2'—C9' | −91.8 (2) |
O3—C1—C2—C9 | −76.4 (2) | O3'—C1'—C2'—C9' | 85.8 (2) |
O1—S1—C3—C4 | 143.90 (16) | O1'—S1'—C3'—C4' | −141.09 (16) |
O2—S1—C3—C4 | 15.46 (18) | O2'—S1'—C3'—C4' | −12.26 (18) |
N1—S1—C3—C4 | −98.58 (17) | N1'—S1'—C3'—C4' | 101.18 (17) |
O1—S1—C3—C8 | −29.91 (19) | O1'—S1'—C3'—C8' | 34.36 (19) |
O2—S1—C3—C8 | −158.35 (16) | O2'—S1'—C3'—C8' | 163.20 (16) |
N1—S1—C3—C8 | 87.61 (18) | N1'—S1'—C3'—C8' | −83.36 (18) |
C8—C3—C4—C5 | 0.3 (3) | C8'—C3'—C4'—C5' | 1.9 (3) |
S1—C3—C4—C5 | −173.91 (17) | S1'—C3'—C4'—C5' | 177.69 (17) |
C3—C4—C5—C6 | 1.5 (3) | C3'—C4'—C5'—C6' | −2.3 (3) |
C4—C5—C6—C7 | −1.5 (3) | C4'—C5'—C6'—C7' | 0.3 (3) |
C5—C6—C7—C8 | −0.3 (3) | C5'—C6'—C7'—C8' | 2.0 (3) |
C6—C7—C8—C3 | 2.1 (3) | C6'—C7'—C8'—C3' | −2.3 (3) |
C6—C7—C8—N2 | −176.32 (18) | C6'—C7'—C8'—N2' | 175.20 (19) |
C4—C3—C8—C7 | −2.1 (3) | C4'—C3'—C8'—C7' | 0.4 (3) |
S1—C3—C8—C7 | 171.76 (15) | S1'—C3'—C8'—C7' | −175.09 (16) |
C4—C3—C8—N2 | 176.24 (18) | C4'—C3'—C8'—N2' | −177.00 (18) |
S1—C3—C8—N2 | −9.9 (3) | S1'—C3'—C8'—N2' | 7.5 (3) |
O6—N2—C8—C7 | −47.1 (3) | O6'—N2'—C8'—C7' | 45.3 (3) |
O5—N2—C8—C7 | 131.3 (2) | O5'—N2'—C8'—C7' | −132.4 (2) |
O6—N2—C8—C3 | 134.4 (2) | O6'—N2'—C8'—C3' | −137.2 (2) |
O5—N2—C8—C3 | −47.1 (3) | O5'—N2'—C8'—C3' | 45.1 (3) |
N1—C2—C9—C11 | 66.0 (2) | N1'—C2'—C9'—C11' | −68.0 (2) |
C1—C2—C9—C11 | −176.22 (17) | C1'—C2'—C9'—C11' | 173.22 (17) |
C10—C2—C9—C11 | −55.4 (2) | C10'—C2'—C9'—C11' | 54.2 (2) |
N1—C2—C10—C13 | −61.5 (2) | N1'—C2'—C10'—C13' | 63.4 (2) |
C1—C2—C10—C13 | 174.60 (16) | C1'—C2'—C10'—C13' | −172.35 (16) |
C9—C2—C10—C13 | 56.6 (2) | C9'—C2'—C10'—C13' | −55.2 (2) |
C2—C9—C11—C12 | 54.6 (2) | C2'—C9'—C11'—C12' | −55.5 (2) |
C9—C11—C12—C13 | −53.9 (2) | C9'—C11'—C12'—C13' | 55.3 (2) |
C11—C12—C13—C10 | 55.3 (3) | C11'—C12'—C13'—C10' | −55.7 (2) |
C2—C10—C13—C12 | −57.3 (2) | C2'—C10'—C13'—C12' | 56.9 (2) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3O···O4′ | 0.85 (3) | 1.77 (3) | 2.619 (2) | 175 (3) |
N1—H1N···O5 | 0.83 (3) | 2.61 (3) | 3.050 (2) | 115 (2) |
O3′—H3O′···O4 | 0.89 (3) | 1.82 (3) | 2.705 (2) | 172 (3) |
N1′—H1N′···O5′ | 0.83 (3) | 2.53 (3) | 2.999 (2) | 117 (2) |
N1′—H1N′···O5i | 0.83 (3) | 2.40 (3) | 3.214 (2) | 168 (3) |
Symmetry code: (i) x, −y+3/2, z+1/2. |
Experimental details
| (I) | (II) |
Crystal data |
Chemical formula | C10H12N2O6S | C13H16N2O6S |
Mr | 288.28 | 328.34 |
Crystal system, space group | Monoclinic, P21/c | Monoclinic, P21/c |
Temperature (K) | 100 | 100 |
a, b, c (Å) | 11.665 (3), 10.614 (2), 11.121 (4) | 15.9780 (12), 14.9840 (11), 13.436 (1) |
α, β, γ (°) | 90, 117.80 (2), 90 | 90, 113.568 (6), 90 |
V (Å3) | 1217.9 (6) | 2948.4 (4) |
Z | 4 | 8 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.29 | 0.25 |
Crystal size (mm) | 0.45 × 0.43 × 0.20 | 0.55 × 0.42 × 0.35 |
|
Data collection |
Diffractometer | Enraf-Nonius CAD4 (with Oxford Cryostream) diffractometer | Enraf-Nonius CAD4 (with Oxford Cryostream) diffractometer |
Absorption correction | ψ scan (North et al., 1968) | ψ scan (North et al., 1968) |
Tmin, Tmax | 0.880, 0.944 | 0.887, 0.916 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4282, 3536, 2710 | 9183, 7815, 5772 |
Rint | 0.035 | 0.033 |
(sin θ/λ)max (Å−1) | 0.703 | 0.682 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.109, 1.03 | 0.043, 0.116, 1.09 |
No. of reflections | 3536 | 7815 |
No. of parameters | 183 | 413 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.46, −0.37 | 0.63, −0.61 |
Selected geometric parameters (Å, º) for (I) topS—O1 | 1.4338 (13) | S—C3 | 1.7832 (18) |
S—O2 | 1.4376 (13) | O3—C1 | 1.314 (2) |
S—N1 | 1.6096 (16) | O4—C1 | 1.224 (2) |
| | | |
C10—C2—C9 | 110.50 (15) | | |
| | | |
C3—S—N1—C2 | 108.97 (15) | N1—S—C3—C8 | 77.28 (16) |
S—N1—C2—C1 | 55.80 (19) | O5—N2—C8—C3 | −38.5 (2) |
O3—C1—C2—N1 | 38.50 (19) | | |
Hydrogen-bond geometry (Å, º) for (I) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3O···O4i | 0.90 (3) | 1.74 (3) | 2.629 (2) | 171 (3) |
N1—H1N···O5 | 0.78 (3) | 2.32 (3) | 2.823 (2) | 123 (2) |
N1—H1N···O4ii | 0.78 (3) | 2.58 (3) | 3.342 (2) | 165 (2) |
Symmetry codes: (i) −x+2, −y+2, −z+2; (ii) −x+2, y−1/2, −z+3/2. |
Selected geometric parameters (Å, º) for (II) topS1—O1 | 1.4287 (16) | S1'—O1' | 1.4290 (15) |
S1—O2 | 1.4397 (15) | S1'—O2' | 1.4363 (15) |
S1—N1 | 1.6134 (17) | S1'—N1' | 1.6041 (17) |
S1—C3 | 1.778 (2) | S1'—C3' | 1.781 (2) |
O3—C1 | 1.319 (2) | O3'—C1' | 1.314 (2) |
O4—C1 | 1.224 (2) | O4'—C1' | 1.223 (2) |
| | | |
C10—C2—C9 | 109.44 (16) | C10'—C2'—C9' | 109.17 (16) |
| | | |
C3—S1—N1—C2 | 108.84 (16) | C3'—S1'—N1'—C2' | −103.64 (17) |
S1—N1—C2—C1 | 56.7 (2) | S1'—N1'—C2'—C1' | −59.4 (2) |
O3—C1—C2—N1 | 39.1 (2) | O3'—C1'—C2'—N1' | −30.4 (2) |
N1—S1—C3—C8 | 87.61 (18) | N1'—S1'—C3'—C8' | −83.36 (18) |
O5—N2—C8—C3 | −47.1 (3) | O5'—N2'—C8'—C3' | 45.1 (3) |
C10—C2—C9—C11 | −55.4 (2) | C10'—C2'—C9'—C11' | 54.2 (2) |
C9—C2—C10—C13 | 56.6 (2) | C9'—C2'—C10'—C13' | −55.2 (2) |
C2—C9—C11—C12 | 54.6 (2) | C2'—C9'—C11'—C12' | −55.5 (2) |
C9—C11—C12—C13 | −53.9 (2) | C9'—C11'—C12'—C13' | 55.3 (2) |
C11—C12—C13—C10 | 55.3 (3) | C11'—C12'—C13'—C10' | −55.7 (2) |
C2—C10—C13—C12 | −57.3 (2) | C2'—C10'—C13'—C12' | 56.9 (2) |
Hydrogen-bond geometry (Å, º) for (II) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3O···O4' | 0.85 (3) | 1.77 (3) | 2.619 (2) | 175 (3) |
N1—H1N···O5 | 0.83 (3) | 2.61 (3) | 3.050 (2) | 115 (2) |
O3'—H3O'···O4 | 0.89 (3) | 1.82 (3) | 2.705 (2) | 172 (3) |
N1'—H1N'···O5' | 0.83 (3) | 2.53 (3) | 2.999 (2) | 117 (2) |
N1'—H1N'···O5i | 0.83 (3) | 2.40 (3) | 3.214 (2) | 168 (3) |
Symmetry code: (i) x, −y+3/2, z+1/2. |
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The incorporation of α,α-disubstituted amino acids into short peptide segments can dramatically increase the helical propensity of sequences as short as ten residues (Prasad & Balaram, 1984; Marshall, et al., 1990). This effect has been of recent interest in the development of novel amphipathic helical peptides, designed to exhibit anti-microbial activity under physiological conditions (Wysong et al., 1997; Yokum et al., 1996). However, the incorporation of some α,α-disubstituted amino acids into peptide sequences has proven to be difficult during solid phase peptide synthesis (SPPS) by the use of the Fmoc-acid fluoride (Fmoc = 9-fluorenylmethoxycarbonyl) conditions set forth by Wenschuh et al. (1994). As part of an effort to increase the overall efficacy of the couplings, we have probed the utilization of the acid chloride analogues of several commonly used α,α-disubstituted amino acids, two of which are described here, Aib (2-aminoisobutyric acid) and Cyh (1-amino-1-cyclohexanecarboxylic acid). Because the use of acid chlorides greatly increases the propensity of oxazolone formation under SPPS conditions (Carpino et al., 1991), we experimented with the use of the ortho-nitrobenzensulfonyl protecting group as an alternative to the Fmoc protecting group. The ortho-nitrobenzenesulfonyl group is readily cleaved by nucleophilic displacement (Fukuyama et al., 1995). It is, however, stable under acidic conditions, and is thus orthogonal to the Boc chemistry (Boc = t-butyloxycarbonyl) required for sidegroup protection of several amino acids during SPPS. In addition, due to the lower nucleophilicity of the sulfonyl group, oxazolone formation by intramolecular cyclization is minimized (Miller & Scanlan, 1998). The incorporation of the ortho-nitrobenzenesulfonyl group has the added advantage of introducing a greater propensity towards crystallization of the amino acid derivatives. We herein report the first crystallographic data on the o-nitrobenzenesulfonyl derivatives of these α,α-disubstituted amino acids, oNBS-Aib, (I), and oNBS-Cyh, (II). \sch
oNBS-Aib has Z' = 1, while compound oNBS-Cyh has Z' = 2. The conformations of the molecules are described by five torsion angles: that about the C—NO2 bond, and the four in the C—S—N—C—C(carboxy) chain. The conformations of oNBS-Aib and the two independent molecules of oNBS-Cyh are quite similar. In all three cases, the NO2 group is rotated out of the plane of its attached phenyl group by 38.5 (2)–47.1 (3)°, as measured by the magnitudes of torsion angles O5—N2—C8—C3. This is similar to, but slightly smaller than the 52.4 (6)° seen in N,N-dimethyl-o-nitrobenzenesulfonamide (Ruostesuo et al., 1989). The four torsion angles about the C—S—N—C—C(carboxy) chain exhibit good agreement between the two molecules of oNBS-Cyh (mean difference 4.6°), and between oNBS-Aib and oNBS-Cyh (mean differences 4.3° with the unprimed molecule and 6.1° with the primed molecule). This conformation is different, however, from the conformation seen in N-p-toluenesulfonyl-α-aminoisobutyric acid (Crisma et al., 1999), which differs from oNBS-Aib only by having a p-tosyl subsituent on S rather than o-nitrophenyl. In that p-tosyl compound, torsion angles along the C—S—N—C—C(carboxy) chain are, respectively, 52.5 (2), 84.1 (3), 80.1 (3), and 33.7 (4)°. While the N—C—C—O torsion angle of the p-tosyl compound agrees well with those seen in oNBS-Aib and oNBS-Cyh, the other three torsion angles differ by 20–30°.
The likely cause of this conformational difference is hydrogen bonding by the N—H group. In the p-tosyl compound (Crisma et al., 1999), the N—H group forms a near-linear intermolecular hydrogen bond of N···O length 2.893 (3) Å to sulfonyl oxygen. In both oNBS-Aib and oNBS-Cyh, all N—H groups form nonlinear intramolecular contacts to nitro oxygen atoms, and longer, more linear intermolecular interactions with nitro or carboxy O. The COOH group of oNBS-Aib forms a centrosymmetric hydrogen-bonded dimer with O···O distance 2.629 (2) Å. The two independent molecules of oNBS-Cyh form a hydrogen-bonded dimer about a pseudocenter near 1/4, 3/4, 1/2, with O···O distances 2.619 (2) and 2.705 (2) Å.
The difference in the environments of the primed and unprimed molecules may be seen in the hydrogen bonding by the N—H group. That of the primed molecule forms a near-linear intermolecular contact to nitro oxygen O5i (i = x, 3/2 − y, 1/2 + z, see Table 2), while the nearest distance to the unprimed N—H group is somewhat longer, 3.767 (2) Å to sulfonyl oxygen O1' at x, 3/2 − y, z − 1/2, and somewhat less linear, with N—H···O angle 152 (2)°.
The cyclohexyl group of oNBS-Cyh is in the chair conformation, having endocyclic torsion angle magnitudes in the range 53.9 (2)–57.3 (2)°, in good agreement with the mean value of 54.6° observed in 1-aminocyclohexane-1-carboxylic acid and six of its derivatives (Valle et al., 1988).
We have isolated a second polymorph of oNBS-Cyh having Z' = 1 from the same crystallization, but have not obtained crystals of sufficient quality to report the full structure here. That polymorph has space group P1, with cell dimensions a = 8.48 (2), b = 8.52 (2), c = 11.44 (3) Å, α = 97.2 (2), β = 102.8 (2), γ = 106.1 (2)°, V = 759 (3) Å3 at 297 K, R = 0.090. Its conformation is quite similar to that of the Z' = 2 polymorph described here.