Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807024269/cv2245sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807024269/cv2245Isup2.hkl |
CCDC reference: 651453
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.003 Å
- R factor = 0.040
- wR factor = 0.114
- Data-to-parameter ratio = 15.4
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT154_ALERT_1_C The su's on the Cell Angles are Equal (x 10000) 200 Deg. PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for S PLAT717_ALERT_1_C D...A Unknown or Inconsistent Label .......... CG(PHEN
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 3 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
For the crystal structures of isomers of the title compound, see: Choi et al. (2007a,b). For details of the pharmacological properties of benzofuran compounds, see: Howlett et al. (1999) and Ward (1997).
3-Chloroperbenzoic acid (77%, 471 mg, 2.1 mmol) was added in small portions to a stirred solution of 3,5-dimethyl-2-phenyl-1-benzofuran (508 mg, 2.0 mmol) in dichloromethane (30 ml) at 273 K. After being stirred at room temperature for 1 h, the mixture was washed with saturated sodium bicarbonate solution and the organic layer separated, dried over magnesium sulfate, filtered and concentrated in vacuum. The residue was purified by column chromatography (ethyl acetate) to afford the title compound as a colorless solid [yield 83%, m.p. 417–418 K; Rf = 0.56 (ethyl acetate)]. Single crystals suitable for X-ray diffraction were prepared by slow evaporation of a dilute solution of title compound (I) in tetrahydrofuran at room temperature.
All H atoms were geometrically located in ideal positions and refined using a riding model, with C—H = 0.93 Å for aromatic H atoms and C—H = 0.96 Å for methyl H atoms, and with Uiso(H) = 1.2Ueq(C) for aromatic H atoms, and Uiso(H) = 1.5Ueq(C) for methyl H atoms.
1-Benzofuran ring systems have attracted considerable interest because of their various pharmacological properties (Howlett et al., 1999; Ward, 1997). With our continuing studies on the synthesis and structures of 2-phenyl-benzofuran derivatives, the crystal structures of 5-chloro-3-methylsulfinyl-2-phenyl-1-benzofuran (Choi et al., 2007a) and 5-bromo-3-methylsulfinyl-2-phenyl-1-benzofuran (Choi et al., 2007b) have been described to the literature. Herein we report the molecular and crystal structure of the title compound (I) (Fig. 1).
The benzofuran unit is essentially planar, with a mean deviation of 0.016 Å from the least-squares plane defined by the nine constituent atoms. The dihedral angle in (I) formed by the plane of the benzofuran ring and the plane of phenyl ring is 31.94 (7)°. The molecular packing (Fig. 2) is stabilized by CH2—H···π interactions between the S-methyl group and a phenyl ring, with a C16—H16B···Cgi separation of 3.14 Å (Cg is a centroid of the C9—C14 phenyl ring, symmetry code as in Fig. 2).
For the crystal structures of isomers of the title compound, see: Choi et al. (2007a,b). For details of the pharmacological properties of benzofuran compounds, see: Howlett et al. (1999) and Ward (1997).
Data collection: SMART (Bruker, 1997); cell refinement: SAINT (Bruker, 1997); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPIII (Farrugia, 1997) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97.
C16H14O2S | Z = 2 |
Mr = 270.33 | F(000) = 284 |
Triclinic, P1 | Dx = 1.301 Mg m−3 |
Hall symbol: -p_1 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.3788 (5) Å | Cell parameters from 2704 reflections |
b = 8.7492 (8) Å | θ = 2.4–28.2° |
c = 15.120 (1) Å | µ = 0.23 mm−1 |
α = 78.140 (2)° | T = 298 K |
β = 85.231 (2)° | Block, colourless |
γ = 83.248 (2)° | 0.52 × 0.41 × 0.23 mm |
V = 690.26 (10) Å3 |
Bruker SMART CCD diffractometer | 2308 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.026 |
Graphite monochromator | θmax = 26.0°, θmin = 2.4° |
Detector resolution: 10.00 pixels mm-1 | h = −6→6 |
φ and ω scans | k = −10→9 |
3934 measured reflections | l = −17→18 |
2673 independent reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.114 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0633P)2 + 0.1495P] where P = (Fo2 + 2Fc2)/3 |
2673 reflections | (Δ/σ)max < 0.001 |
174 parameters | Δρmax = 0.25 e Å−3 |
0 restraints | Δρmin = −0.23 e Å−3 |
C16H14O2S | γ = 83.248 (2)° |
Mr = 270.33 | V = 690.26 (10) Å3 |
Triclinic, P1 | Z = 2 |
a = 5.3788 (5) Å | Mo Kα radiation |
b = 8.7492 (8) Å | µ = 0.23 mm−1 |
c = 15.120 (1) Å | T = 298 K |
α = 78.140 (2)° | 0.52 × 0.41 × 0.23 mm |
β = 85.231 (2)° |
Bruker SMART CCD diffractometer | 2308 reflections with I > 2σ(I) |
3934 measured reflections | Rint = 0.026 |
2673 independent reflections |
R[F2 > 2σ(F2)] = 0.040 | 0 restraints |
wR(F2) = 0.114 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.25 e Å−3 |
2673 reflections | Δρmin = −0.23 e Å−3 |
174 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S | −0.01847 (8) | 0.17113 (5) | 0.39289 (3) | 0.04671 (17) | |
O1 | −0.0475 (2) | 0.41996 (15) | 0.14345 (9) | 0.0543 (3) | |
O2 | −0.0081 (3) | 0.00196 (16) | 0.39122 (10) | 0.0737 (5) | |
C1 | 0.0325 (3) | 0.2664 (2) | 0.27927 (12) | 0.0437 (4) | |
C2 | 0.2146 (3) | 0.2144 (2) | 0.21257 (11) | 0.0442 (4) | |
C3 | 0.4194 (3) | 0.1002 (2) | 0.21359 (13) | 0.0490 (4) | |
H3 | 0.4613 | 0.0326 | 0.2674 | 0.059* | |
C4 | 0.5596 (3) | 0.0887 (2) | 0.13358 (13) | 0.0539 (5) | |
C5 | 0.4902 (4) | 0.1901 (3) | 0.05283 (14) | 0.0652 (6) | |
H5 | 0.5848 | 0.1812 | −0.0006 | 0.078* | |
C6 | 0.2868 (4) | 0.3026 (3) | 0.04971 (13) | 0.0647 (6) | |
H6 | 0.2412 | 0.3685 | −0.0042 | 0.078* | |
C7 | 0.1552 (3) | 0.3118 (2) | 0.13069 (12) | 0.0502 (4) | |
C8 | −0.1166 (3) | 0.3897 (2) | 0.23446 (12) | 0.0472 (4) | |
C9 | −0.3267 (3) | 0.4955 (2) | 0.26260 (13) | 0.0494 (4) | |
C10 | −0.3412 (4) | 0.5378 (3) | 0.34680 (16) | 0.0616 (5) | |
H10 | −0.2165 | 0.4981 | 0.3869 | 0.074* | |
C11 | −0.5421 (4) | 0.6394 (3) | 0.37099 (18) | 0.0740 (7) | |
H11 | −0.5535 | 0.6656 | 0.4279 | 0.089* | |
C12 | −0.7245 (4) | 0.7014 (3) | 0.3110 (2) | 0.0752 (7) | |
H12 | −0.8571 | 0.7707 | 0.3271 | 0.090* | |
C13 | −0.7103 (4) | 0.6609 (3) | 0.22781 (18) | 0.0705 (6) | |
H13 | −0.8349 | 0.7018 | 0.1878 | 0.085* | |
C14 | −0.5121 (3) | 0.5594 (2) | 0.20282 (15) | 0.0575 (5) | |
H14 | −0.5028 | 0.5339 | 0.1458 | 0.069* | |
C15 | 0.7849 (4) | −0.0321 (3) | 0.13411 (17) | 0.0691 (6) | |
H15A | 0.8440 | −0.0616 | 0.1940 | 0.104* | |
H15B | 0.9155 | 0.0116 | 0.0928 | 0.104* | |
H15C | 0.7382 | −0.1231 | 0.1158 | 0.104* | |
C16 | 0.2699 (4) | 0.2019 (3) | 0.43396 (15) | 0.0777 (7) | |
H16A | 0.2749 | 0.1545 | 0.4970 | 0.117* | |
H16B | 0.2818 | 0.3126 | 0.4262 | 0.117* | |
H16C | 0.4079 | 0.1553 | 0.4007 | 0.117* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S | 0.0475 (3) | 0.0457 (3) | 0.0452 (3) | −0.00823 (18) | 0.00619 (18) | −0.00651 (18) |
O1 | 0.0574 (8) | 0.0514 (7) | 0.0472 (7) | 0.0105 (6) | −0.0044 (6) | −0.0024 (6) |
O2 | 0.1148 (13) | 0.0462 (8) | 0.0576 (9) | −0.0207 (8) | 0.0182 (8) | −0.0072 (6) |
C1 | 0.0433 (9) | 0.0421 (9) | 0.0440 (9) | −0.0032 (7) | −0.0001 (7) | −0.0064 (7) |
C2 | 0.0460 (9) | 0.0417 (9) | 0.0436 (9) | −0.0033 (7) | −0.0012 (7) | −0.0065 (7) |
C3 | 0.0483 (10) | 0.0440 (9) | 0.0519 (10) | 0.0002 (7) | −0.0046 (8) | −0.0053 (8) |
C4 | 0.0493 (10) | 0.0529 (11) | 0.0593 (11) | 0.0006 (8) | −0.0006 (8) | −0.0148 (9) |
C5 | 0.0680 (13) | 0.0746 (14) | 0.0498 (11) | 0.0048 (10) | 0.0072 (9) | −0.0162 (10) |
C6 | 0.0766 (14) | 0.0673 (13) | 0.0431 (10) | 0.0089 (10) | −0.0031 (9) | −0.0040 (9) |
C7 | 0.0515 (10) | 0.0479 (10) | 0.0477 (10) | 0.0057 (8) | −0.0044 (8) | −0.0071 (8) |
C8 | 0.0472 (9) | 0.0441 (9) | 0.0485 (10) | −0.0026 (7) | −0.0015 (7) | −0.0072 (7) |
C9 | 0.0445 (9) | 0.0388 (9) | 0.0631 (11) | −0.0032 (7) | 0.0017 (8) | −0.0085 (8) |
C10 | 0.0588 (12) | 0.0562 (11) | 0.0717 (13) | −0.0003 (9) | −0.0027 (9) | −0.0207 (10) |
C11 | 0.0749 (15) | 0.0616 (13) | 0.0912 (17) | −0.0074 (11) | 0.0137 (13) | −0.0356 (13) |
C12 | 0.0557 (12) | 0.0493 (12) | 0.119 (2) | 0.0022 (9) | 0.0129 (13) | −0.0245 (13) |
C13 | 0.0519 (11) | 0.0546 (12) | 0.0989 (18) | 0.0056 (9) | −0.0028 (11) | −0.0080 (12) |
C14 | 0.0477 (10) | 0.0495 (10) | 0.0716 (13) | −0.0007 (8) | −0.0020 (9) | −0.0067 (9) |
C15 | 0.0563 (12) | 0.0690 (14) | 0.0811 (15) | 0.0095 (10) | 0.0013 (10) | −0.0240 (11) |
C16 | 0.0682 (14) | 0.1050 (19) | 0.0569 (13) | −0.0326 (13) | −0.0148 (10) | 0.0087 (12) |
S—O2 | 1.4799 (14) | C9—C10 | 1.391 (3) |
S—C1 | 1.7630 (17) | C9—C14 | 1.391 (3) |
S—C16 | 1.787 (2) | C10—C11 | 1.391 (3) |
O1—C8 | 1.375 (2) | C10—H10 | 0.9300 |
O1—C7 | 1.385 (2) | C11—C12 | 1.378 (3) |
C1—C8 | 1.361 (2) | C11—H11 | 0.9300 |
C1—C2 | 1.450 (2) | C12—C13 | 1.370 (4) |
C2—C7 | 1.389 (2) | C12—H12 | 0.9300 |
C2—C3 | 1.396 (2) | C13—C14 | 1.384 (3) |
C3—C4 | 1.387 (3) | C13—H13 | 0.9300 |
C3—H3 | 0.9300 | C14—H14 | 0.9300 |
C4—C5 | 1.404 (3) | C15—H15A | 0.9600 |
C4—C15 | 1.511 (3) | C15—H15B | 0.9600 |
C5—C6 | 1.380 (3) | C15—H15C | 0.9600 |
C5—H5 | 0.9300 | C16—H16A | 0.9600 |
C6—C7 | 1.375 (3) | C16—H16B | 0.9600 |
C6—H6 | 0.9300 | C16—H16C | 0.9600 |
C8—C9 | 1.467 (2) | ||
O2—S—C1 | 105.74 (8) | C10—C9—C8 | 121.54 (17) |
O2—S—C16 | 107.32 (12) | C14—C9—C8 | 119.48 (18) |
C1—S—C16 | 98.26 (9) | C9—C10—C11 | 120.0 (2) |
C8—O1—C7 | 106.44 (13) | C9—C10—H10 | 120.0 |
C8—C1—C2 | 106.90 (15) | C11—C10—H10 | 120.0 |
C8—C1—S | 125.75 (14) | C12—C11—C10 | 120.3 (2) |
C2—C1—S | 126.70 (13) | C12—C11—H11 | 119.9 |
C7—C2—C3 | 118.70 (16) | C10—C11—H11 | 119.9 |
C7—C2—C1 | 105.21 (15) | C13—C12—C11 | 119.9 (2) |
C3—C2—C1 | 136.07 (16) | C13—C12—H12 | 120.0 |
C4—C3—C2 | 119.38 (17) | C11—C12—H12 | 120.0 |
C4—C3—H3 | 120.3 | C12—C13—C14 | 120.5 (2) |
C2—C3—H3 | 120.3 | C12—C13—H13 | 119.8 |
C3—C4—C5 | 119.35 (18) | C14—C13—H13 | 119.8 |
C3—C4—C15 | 119.91 (18) | C13—C14—C9 | 120.3 (2) |
C5—C4—C15 | 120.75 (18) | C13—C14—H14 | 119.8 |
C6—C5—C4 | 122.46 (19) | C9—C14—H14 | 119.8 |
C6—C5—H5 | 118.8 | C4—C15—H15A | 109.5 |
C4—C5—H5 | 118.8 | C4—C15—H15B | 109.5 |
C7—C6—C5 | 116.35 (18) | H15A—C15—H15B | 109.5 |
C7—C6—H6 | 121.8 | C4—C15—H15C | 109.5 |
C5—C6—H6 | 121.8 | H15A—C15—H15C | 109.5 |
C6—C7—O1 | 125.81 (17) | H15B—C15—H15C | 109.5 |
C6—C7—C2 | 123.75 (18) | S—C16—H16A | 109.5 |
O1—C7—C2 | 110.42 (16) | S—C16—H16B | 109.5 |
C1—C8—O1 | 111.02 (15) | H16A—C16—H16B | 109.5 |
C1—C8—C9 | 134.00 (17) | S—C16—H16C | 109.5 |
O1—C8—C9 | 114.97 (15) | H16A—C16—H16C | 109.5 |
C10—C9—C14 | 118.95 (18) | H16B—C16—H16C | 109.5 |
O2—S—C1—C8 | 127.57 (17) | C3—C2—C7—O1 | −178.22 (15) |
C16—S—C1—C8 | −121.74 (18) | C1—C2—C7—O1 | 0.7 (2) |
O2—S—C1—C2 | −42.01 (18) | C2—C1—C8—O1 | 1.0 (2) |
C16—S—C1—C2 | 68.69 (19) | S—C1—C8—O1 | −170.29 (12) |
C8—C1—C2—C7 | −1.0 (2) | C2—C1—C8—C9 | −177.78 (19) |
S—C1—C2—C7 | 170.14 (14) | S—C1—C8—C9 | 10.9 (3) |
C8—C1—C2—C3 | 177.6 (2) | C7—O1—C8—C1 | −0.5 (2) |
S—C1—C2—C3 | −11.2 (3) | C7—O1—C8—C9 | 178.49 (15) |
C7—C2—C3—C4 | 1.0 (3) | C1—C8—C9—C10 | 32.1 (3) |
C1—C2—C3—C4 | −177.57 (19) | O1—C8—C9—C10 | −146.66 (18) |
C2—C3—C4—C5 | −1.2 (3) | C1—C8—C9—C14 | −150.1 (2) |
C2—C3—C4—C15 | 178.73 (17) | O1—C8—C9—C14 | 31.2 (2) |
C3—C4—C5—C6 | 0.3 (3) | C14—C9—C10—C11 | 1.6 (3) |
C15—C4—C5—C6 | −179.6 (2) | C8—C9—C10—C11 | 179.47 (19) |
C4—C5—C6—C7 | 0.7 (4) | C9—C10—C11—C12 | −1.5 (3) |
C5—C6—C7—O1 | 177.1 (2) | C10—C11—C12—C13 | 1.1 (4) |
C5—C6—C7—C2 | −0.9 (3) | C11—C12—C13—C14 | −0.8 (4) |
C8—O1—C7—C6 | −178.4 (2) | C12—C13—C14—C9 | 1.0 (3) |
C8—O1—C7—C2 | −0.2 (2) | C10—C9—C14—C13 | −1.4 (3) |
C3—C2—C7—C6 | 0.1 (3) | C8—C9—C14—C13 | −179.28 (18) |
C1—C2—C7—C6 | 179.04 (19) |
D—H···A | D—H | H···A | D···A | D—H···A |
C16—H16B···Cg(phenyl)i | 0.96 | 3.14 | 3.941 (2) | 142 |
Symmetry code: (i) x+1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C16H14O2S |
Mr | 270.33 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 5.3788 (5), 8.7492 (8), 15.120 (1) |
α, β, γ (°) | 78.140 (2), 85.231 (2), 83.248 (2) |
V (Å3) | 690.26 (10) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.23 |
Crystal size (mm) | 0.52 × 0.41 × 0.23 |
Data collection | |
Diffractometer | Bruker SMART CCD |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3934, 2673, 2308 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.114, 1.05 |
No. of reflections | 2673 |
No. of parameters | 174 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.25, −0.23 |
Computer programs: SMART (Bruker, 1997), SAINT (Bruker, 1997), SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEPIII (Farrugia, 1997) and DIAMOND (Brandenburg, 1998), SHELXL97.
D—H···A | D—H | H···A | D···A | D—H···A |
C16—H16B···Cg(phenyl)i | 0.96 | 3.14 | 3.941 (2) | 142 |
Symmetry code: (i) x+1, y, z. |
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1-Benzofuran ring systems have attracted considerable interest because of their various pharmacological properties (Howlett et al., 1999; Ward, 1997). With our continuing studies on the synthesis and structures of 2-phenyl-benzofuran derivatives, the crystal structures of 5-chloro-3-methylsulfinyl-2-phenyl-1-benzofuran (Choi et al., 2007a) and 5-bromo-3-methylsulfinyl-2-phenyl-1-benzofuran (Choi et al., 2007b) have been described to the literature. Herein we report the molecular and crystal structure of the title compound (I) (Fig. 1).
The benzofuran unit is essentially planar, with a mean deviation of 0.016 Å from the least-squares plane defined by the nine constituent atoms. The dihedral angle in (I) formed by the plane of the benzofuran ring and the plane of phenyl ring is 31.94 (7)°. The molecular packing (Fig. 2) is stabilized by CH2—H···π interactions between the S-methyl group and a phenyl ring, with a C16—H16B···Cgi separation of 3.14 Å (Cg is a centroid of the C9—C14 phenyl ring, symmetry code as in Fig. 2).