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The title compound, [Ni(dien)2][GeF6] (dien is diethyl­enetri­amine, C4H13N3), synthesized under mild solvothermal conditions, is a novel zero-dimensional material in which [GeF6]2− building anions are connected to [Ni(dien)2]2+ cations via hydrogen bonds between F atoms and N—H groups. Both metal atoms are located on special positions of site symmetry 2/m. Furthermore, one F and one N atom (including the attached H atom) are located on a mirror plane.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536803006160/bt6249sup1.cif
Contains datablocks global, I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536803006160/bt6249Isup2.hkl
Contains datablock I

CCDC reference: 209894

Key indicators

  • Single-crystal X-ray study
  • T = 293 K
  • Mean [sigma](C-C) = 0.007 Å
  • R factor = 0.039
  • wR factor = 0.119
  • Data-to-parameter ratio = 13.0

checkCIF results

No syntax errors found

ADDSYM reports no extra symmetry








Comment top

Despite the rapid development in the syntheses of new materials, the field of fluorides remains undeveloped. More recently, fluoroaluminates such as (C4H12N2)(H3O)[Al3F12] (Tang et al., 2001c) and (C4H12N2)2[Al2F10]·2H2O (Tang et al., 2001 e), the fluorosilicate of (C4N2H12)[SiF6] (Tang et al., 2001f) and fluorotitanates such as (C5H6N)2(H3O)[Ti2F11]·H2O (Tang et al., 2001 d), (C4N2H14)[TiF4O] (Tang et al., 2001a), (C4H12N2)[TiF5(H2O)]2 (Tang et al., 2001b) and (C4H12N2)2[Ti2F10O]·2H2O (Dadachov et al., 2001) have been reported. In those fluorides, the central Al, Si and Ti atoms are all completely coordinated by F atoms. Whereas considerably less work has been done on fluorogermanates, with only a few GeIV fluorides, viz. K2[cis-(CF3)2GeF4] (Brauer et al., 1980), [(CH3)4N][(CF3)3GeF2] (Braueret al., 1986) and N(CH2CH2O)3GeF (Lukevics et al., 1997), structurally characterized. All these fluorogermanates are coordinated by mixed ligands. Recently, the use of hydrofluoric acid as a mineralizing agent in the synthesis of zeolite materials with novel architectures has attracted much attention (Li et al., 1998; Plevert et al., 2001). As part of our interest in the borogermanate microporous materials, we tried to prepare novel open frameworks using organic amines in the presence of hydrofluoric acid. Unexpectedly, the novel title compound, (I), was obtained, which is the first structure of its kind.

The title compound (Fig. 1) is composed of [GeF6]2− anions and [Ni(dien)2]2+ cations. As to the anion of [GeF6]2−, each germanium center is coordinated by six fluoride ligands, resulting in an octahedral geometry, with Ge—F distances in the range 1.798 (2)–1.799 (4) Å, which is consistent with K2GeF6 (Ge—F = 1.77 Å; Hoard & Vincent, 1939), other fluorogermanates (Taylor & Wilson, 1973), and [(CH3)4N][(CF3)3GeF2] (Brauer et al., 1986), and F—Ge—F angles between 89.4 (1) and 180°. The nickel cation displays distorted octahedral geometry and is bonded to six N atoms of two diethylene triamines with Ni—N distances in the range 2.110 (2)–2.112 (4) Å, and N—Ni—N angles in the range 83.1 (1)—180°. Like [Co(dien)2]2+ (Keene & Searle, 1974), [Ni(dien)2]2+ has also s-cis, u-cis and trans configurations, and the latter two are chiral. In the title compound, there is only one unique Ni site of s-cis-[Ni(dien)2]2+. The [GeF6]2− anions interact with [Ni(dien)2] 2+ cations both electrostatically and through weak hydrogen bonds. The hydrogen bonds are formed between the F and N atoms, with F···N distances in the range 3.060 (4)–3.180 (5) Å.

Experimental top

The title compound was prepared from a mixture of germanuim dioxide (GeO2, 0.104 g) boric acid (H3BO3, 0.031 g), NiCl2·6H2O (0.238 g), diethylenetriamine (C4N3H13, 2 ml), pyridine (C5H5N, 2 ml), hydrofluoric acid (HF, 40%, 0.1 ml), and deionized water (2 ml), in the molar ratio 1:1:1:18:25:5:110. The mixture was mechanically stirred completely at room temperature with a final pH of 9.0 and then placed in an autoclave at 443 K for 7 d.

Refinement top

All H atoms bonded to C and N atoms were positioned geometrically (C—H = 0.97 Å and N—H = 0.91 Å) and allowed to ride on their parent C or N atoms.

Computing details top

Data collection: SMART (Bruker, 1999); cell refinement: SMART; data reduction: SHELXTL (Bruker, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.

Figures top
[Figure 1] Fig. 1. The molecular components of the title complex, showing the atom-numbering scheme. Displacement ellipsoids are shown at the 30% probability level. [Symmetry codes: (i) 1/2 − x, 1/2 − y, z; (ii) 1/2 − x, 1/2 − y, 2 − z; (iii) x, y, 2 − z; (iv) 1/2 − x, 1/2 − y, 1 − z; (v) x, y, 1 − z.]
[Figure 2] Fig. 2. Packing diagram of (I), viewed down [101].
Bis(diethylenetriamine-κ3N)nickel hexafluorogermanate top
Crystal data top
[Ni(C4H13N3)2][GeF6]F(000) = 920
Mr = 451.65Dx = 1.902 Mg m3
Orthorhombic, CccmMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2 2cCell parameters from 25 reflections
a = 9.5937 (19) Åθ = 2.5–25.0°
b = 15.193 (3) ŵ = 3.17 mm1
c = 10.819 (2) ÅT = 293 K
V = 1576.9 (6) Å3Polyhedral, purple
Z = 40.48 × 0.40 × 0.22 mm
Data collection top
Bruker CCD area-detector
diffractometer
739 independent reflections
Radiation source: fine-focus sealed tube536 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.032
ϕ and ω scansθmax = 25.0°, θmin = 2.5°
Absorption correction: multi-scan
(SADABS; Sheldrick, 1996)
h = 118
Tmin = 0.238, Tmax = 0.498k = 177
1847 measured reflectionsl = 1212
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.119H-atom parameters constrained
S = 1.16 w = 1/[σ2(Fo2) + (0.0603P)2 + 3.1056P]
where P = (Fo2 + 2Fc2)/3
739 reflections(Δ/σ)max < 0.001
57 parametersΔρmax = 0.59 e Å3
0 restraintsΔρmin = 0.72 e Å3
Crystal data top
[Ni(C4H13N3)2][GeF6]V = 1576.9 (6) Å3
Mr = 451.65Z = 4
Orthorhombic, CccmMo Kα radiation
a = 9.5937 (19) ŵ = 3.17 mm1
b = 15.193 (3) ÅT = 293 K
c = 10.819 (2) Å0.48 × 0.40 × 0.22 mm
Data collection top
Bruker CCD area-detector
diffractometer
739 independent reflections
Absorption correction: multi-scan
(SADABS; Sheldrick, 1996)
536 reflections with I > 2σ(I)
Tmin = 0.238, Tmax = 0.498Rint = 0.032
1847 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0390 restraints
wR(F2) = 0.119H-atom parameters constrained
S = 1.16Δρmax = 0.59 e Å3
739 reflectionsΔρmin = 0.72 e Å3
57 parameters
Special details top

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Ge0.25000.25001.00000.0286 (3)
Ni0.25000.25000.50000.0182 (3)
F20.3595 (2)0.20270 (19)1.1173 (2)0.0479 (7)
F10.3582 (4)0.3467 (3)1.00000.0494 (10)
N10.1309 (3)0.1877 (2)0.6387 (3)0.0287 (8)
H1A0.14260.21620.71080.034*
H1B0.03990.19040.61850.034*
N20.3596 (5)0.1294 (3)0.50000.0271 (11)
H2A0.45250.14160.50000.033*
C10.1721 (5)0.0957 (3)0.6534 (5)0.0408 (11)
H1C0.11340.05870.60220.049*
H1D0.15960.07810.73880.049*
C20.3259 (5)0.0835 (3)0.6159 (4)0.0413 (11)
H2B0.38530.10560.68140.050*
H2C0.34510.02120.60610.050*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Ge0.0138 (5)0.0512 (6)0.0208 (5)0.0018 (4)0.0000.000
Ni0.0144 (6)0.0219 (5)0.0184 (6)0.0002 (4)0.0000.000
F20.0303 (14)0.0757 (18)0.0377 (15)0.0025 (13)0.0096 (12)0.0078 (14)
F10.026 (2)0.062 (2)0.060 (2)0.0089 (18)0.0000.000
N10.0203 (18)0.0380 (18)0.0277 (18)0.0012 (15)0.0031 (14)0.0056 (15)
N20.017 (2)0.033 (2)0.032 (3)0.000 (2)0.0000.000
C10.042 (3)0.035 (2)0.045 (3)0.004 (2)0.009 (2)0.012 (2)
C20.043 (3)0.036 (2)0.044 (3)0.012 (2)0.002 (2)0.012 (2)
Geometric parameters (Å, º) top
Ge—F2i1.798 (2)N1—C11.460 (5)
Ge—F2ii1.798 (2)N1—H1A0.9000
Ge—F21.798 (2)N1—H1B0.9000
Ge—F2iii1.798 (2)N2—C2iv1.471 (5)
Ge—F1ii1.799 (4)N2—C21.471 (5)
Ge—F11.799 (4)N2—H2A0.9100
Ni—N1iii2.110 (3)C1—C21.542 (7)
Ni—N1iv2.110 (3)C1—H1C0.9700
Ni—N1v2.110 (3)C1—H1D0.9700
Ni—N12.110 (3)C2—H2B0.9700
Ni—N22.112 (4)C2—H2C0.9700
Ni—N2v2.112 (4)
F2i—Ge—F2ii90.2 (2)N1—Ni—N2v96.9 (1)
F2i—Ge—F289.8 (2)N2—Ni—N2v180.0
F2ii—Ge—F2180.0C1—N1—Ni111.1 (2)
F2i—Ge—F2iii180.0C1—N1—H1A109.4
F2ii—Ge—F2iii89.8 (2)Ni—N1—H1A109.4
F2—Ge—F2iii90.2 (2)C1—N1—H1B109.4
F2i—Ge—F1ii90.6 (1)Ni—N1—H1B109.4
F2ii—Ge—F1ii89.4 (1)H1A—N1—H1B108.0
F2—Ge—F1ii90.6 (1)C2iv—N2—C2116.9 (5)
F2iii—Ge—F1ii89.4 (1)C2iv—N2—Ni107.6 (3)
F2i—Ge—F189.5 (1)C2—N2—Ni107.6 (3)
F2ii—Ge—F190.6 (1)C2iv—N2—H2A108.2
F2—Ge—F189.4 (1)C2—N2—H2A108.2
F2iii—Ge—F190.6 (1)Ni—N2—H2A108.2
F1ii—Ge—F1180.0N1—C1—C2110.3 (3)
N1iii—Ni—N1iv180.0N1—C1—H1C109.6
N1iii—Ni—N1v90.6 (2)C2—C1—H1C109.6
N1iv—Ni—N1v89.4 (2)N1—C1—H1D109.6
N1iii—Ni—N189.4 (2)C2—C1—H1D109.6
N1iv—Ni—N190.6 (2)H1C—C1—H1D108.1
N1v—Ni—N1180.0N2—C2—C1112.2 (4)
N1iii—Ni—N296.9 (1)N2—C2—H2B109.2
N1iv—Ni—N283.1 (1)C1—C2—H2B109.2
N1v—Ni—N296.9 (1)N2—C2—H2C109.2
N1—Ni—N283.1 (1)C1—C2—H2C109.2
N1iii—Ni—N2v83.1 (1)H2B—C2—H2C107.9
N1iv—Ni—N2v96.9 (1)N1—C1—C2110.3 (3)
N1v—Ni—N2v83.1 (1)N2—C2—C1112.2 (4)
Symmetry codes: (i) x, y, z+2; (ii) x+1/2, y+1/2, z+2; (iii) x+1/2, y+1/2, z; (iv) x, y, z+1; (v) x+1/2, y+1/2, z+1.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1B···F1vi0.902.243.060 (4)152
N1—H1B···F2vi0.902.373.099 (4)138
N1—H1A···F2ii0.902.233.123 (5)171
N2—H2A···F2vii0.912.393.180 (5)145
N2—H2A···F2viii0.912.393.180 (5)145
Symmetry codes: (ii) x+1/2, y+1/2, z+2; (vi) x1/2, y+1/2, z1/2; (vii) x+1, y, z1/2; (viii) x+1, y, z+3/2.

Experimental details

Crystal data
Chemical formula[Ni(C4H13N3)2][GeF6]
Mr451.65
Crystal system, space groupOrthorhombic, Cccm
Temperature (K)293
a, b, c (Å)9.5937 (19), 15.193 (3), 10.819 (2)
V3)1576.9 (6)
Z4
Radiation typeMo Kα
µ (mm1)3.17
Crystal size (mm)0.48 × 0.40 × 0.22
Data collection
DiffractometerBruker CCD area-detector
diffractometer
Absorption correctionMulti-scan
(SADABS; Sheldrick, 1996)
Tmin, Tmax0.238, 0.498
No. of measured, independent and
observed [I > 2σ(I)] reflections
1847, 739, 536
Rint0.032
(sin θ/λ)max1)0.595
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.039, 0.119, 1.16
No. of reflections739
No. of parameters57
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å3)0.59, 0.72

Computer programs: SMART (Bruker, 1999), SMART, SHELXTL (Bruker, 1999), SHELXS97 (Sheldrick, 1990), SHELXL97 (Sheldrick, 1997), SHELXTL.

Selected geometric parameters (Å, º) top
Ge—F21.798 (2)N1—C11.460 (5)
Ge—F11.799 (4)N2—C21.471 (5)
Ni—N12.110 (3)C1—C21.542 (7)
Ni—N22.112 (4)
F2i—Ge—F2180.0N1iv—Ni—N190.6 (2)
F2i—Ge—F2ii89.8 (2)N1ii—Ni—N296.9 (1)
F2—Ge—F2ii90.2 (2)N1—Ni—N283.1 (1)
F2iii—Ge—F189.5 (1)N1—Ni—N2v96.9 (1)
F2—Ge—F189.4 (1)N2—Ni—N2v180.0
F2ii—Ge—F190.6 (1)C1—N1—Ni111.1 (2)
F1i—Ge—F1180.0C2iv—N2—C2116.9 (5)
N1ii—Ni—N1iv180.0N1—C1—C2110.3 (3)
N1ii—Ni—N189.4 (2)N2—C2—C1112.2 (4)
Symmetry codes: (i) x+1/2, y+1/2, z+2; (ii) x+1/2, y+1/2, z; (iii) x, y, z+2; (iv) x, y, z+1; (v) x+1/2, y+1/2, z+1.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1B···F1vi0.902.243.060 (4)152
N1—H1B···F2vi0.902.373.099 (4)138
N1—H1A···F2i0.902.233.123 (5)171
N2—H2A···F2vii0.912.393.180 (5)145
N2—H2A···F2viii0.912.393.180 (5)145
Symmetry codes: (i) x+1/2, y+1/2, z+2; (vi) x1/2, y+1/2, z1/2; (vii) x+1, y, z1/2; (viii) x+1, y, z+3/2.
 

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