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The title compound, [Ni(dien)2][GeF6] (dien is diethylenetriamine, C4H13N3), synthesized under mild solvothermal conditions, is a novel zero-dimensional material in which [GeF6]2− building anions are connected to [Ni(dien)2]2+ cations via hydrogen bonds between F atoms and N—H groups. Both metal atoms are located on special positions of site symmetry 2/m. Furthermore, one F and one N atom (including the attached H atom) are located on a mirror plane.
Supporting information
CCDC reference: 209894
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.007 Å
- R factor = 0.039
- wR factor = 0.119
- Data-to-parameter ratio = 13.0
checkCIF results
No syntax errors found
ADDSYM reports no extra symmetry
The title compound was prepared from a mixture of germanuim dioxide (GeO2, 0.104 g) boric acid (H3BO3, 0.031 g), NiCl2·6H2O (0.238 g), diethylenetriamine (C4N3H13, 2 ml), pyridine (C5H5N, 2 ml), hydrofluoric acid (HF, 40%, 0.1 ml), and deionized water (2 ml), in the molar ratio 1:1:1:18:25:5:110. The mixture was mechanically stirred completely at room temperature with a final pH of 9.0 and then placed in an autoclave at 443 K for 7 d.
All H atoms bonded to C and N atoms were positioned geometrically (C—H = 0.97 Å and N—H = 0.91 Å) and allowed to ride on their parent C or N atoms.
Data collection: SMART (Bruker, 1999); cell refinement: SMART; data reduction: SHELXTL (Bruker, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Bis(diethylenetriamine-
κ3N)nickel hexafluorogermanate
top
Crystal data top
[Ni(C4H13N3)2][GeF6] | F(000) = 920 |
Mr = 451.65 | Dx = 1.902 Mg m−3 |
Orthorhombic, Cccm | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2 2c | Cell parameters from 25 reflections |
a = 9.5937 (19) Å | θ = 2.5–25.0° |
b = 15.193 (3) Å | µ = 3.17 mm−1 |
c = 10.819 (2) Å | T = 293 K |
V = 1576.9 (6) Å3 | Polyhedral, purple |
Z = 4 | 0.48 × 0.40 × 0.22 mm |
Data collection top
Bruker CCD area-detector diffractometer | 739 independent reflections |
Radiation source: fine-focus sealed tube | 536 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.032 |
ϕ and ω scans | θmax = 25.0°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −11→8 |
Tmin = 0.238, Tmax = 0.498 | k = −17→7 |
1847 measured reflections | l = −12→12 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.119 | H-atom parameters constrained |
S = 1.16 | w = 1/[σ2(Fo2) + (0.0603P)2 + 3.1056P] where P = (Fo2 + 2Fc2)/3 |
739 reflections | (Δ/σ)max < 0.001 |
57 parameters | Δρmax = 0.59 e Å−3 |
0 restraints | Δρmin = −0.72 e Å−3 |
Crystal data top
[Ni(C4H13N3)2][GeF6] | V = 1576.9 (6) Å3 |
Mr = 451.65 | Z = 4 |
Orthorhombic, Cccm | Mo Kα radiation |
a = 9.5937 (19) Å | µ = 3.17 mm−1 |
b = 15.193 (3) Å | T = 293 K |
c = 10.819 (2) Å | 0.48 × 0.40 × 0.22 mm |
Data collection top
Bruker CCD area-detector diffractometer | 739 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 536 reflections with I > 2σ(I) |
Tmin = 0.238, Tmax = 0.498 | Rint = 0.032 |
1847 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.119 | H-atom parameters constrained |
S = 1.16 | Δρmax = 0.59 e Å−3 |
739 reflections | Δρmin = −0.72 e Å−3 |
57 parameters | |
Special details top
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Ge | 0.2500 | 0.2500 | 1.0000 | 0.0286 (3) | |
Ni | 0.2500 | 0.2500 | 0.5000 | 0.0182 (3) | |
F2 | 0.3595 (2) | 0.20270 (19) | 1.1173 (2) | 0.0479 (7) | |
F1 | 0.3582 (4) | 0.3467 (3) | 1.0000 | 0.0494 (10) | |
N1 | 0.1309 (3) | 0.1877 (2) | 0.6387 (3) | 0.0287 (8) | |
H1A | 0.1426 | 0.2162 | 0.7108 | 0.034* | |
H1B | 0.0399 | 0.1904 | 0.6185 | 0.034* | |
N2 | 0.3596 (5) | 0.1294 (3) | 0.5000 | 0.0271 (11) | |
H2A | 0.4525 | 0.1416 | 0.5000 | 0.033* | |
C1 | 0.1721 (5) | 0.0957 (3) | 0.6534 (5) | 0.0408 (11) | |
H1C | 0.1134 | 0.0587 | 0.6022 | 0.049* | |
H1D | 0.1596 | 0.0781 | 0.7388 | 0.049* | |
C2 | 0.3259 (5) | 0.0835 (3) | 0.6159 (4) | 0.0413 (11) | |
H2B | 0.3853 | 0.1056 | 0.6814 | 0.050* | |
H2C | 0.3451 | 0.0212 | 0.6061 | 0.050* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Ge | 0.0138 (5) | 0.0512 (6) | 0.0208 (5) | −0.0018 (4) | 0.000 | 0.000 |
Ni | 0.0144 (6) | 0.0219 (5) | 0.0184 (6) | 0.0002 (4) | 0.000 | 0.000 |
F2 | 0.0303 (14) | 0.0757 (18) | 0.0377 (15) | 0.0025 (13) | −0.0096 (12) | 0.0078 (14) |
F1 | 0.026 (2) | 0.062 (2) | 0.060 (2) | −0.0089 (18) | 0.000 | 0.000 |
N1 | 0.0203 (18) | 0.0380 (18) | 0.0277 (18) | 0.0012 (15) | 0.0031 (14) | 0.0056 (15) |
N2 | 0.017 (2) | 0.033 (2) | 0.032 (3) | 0.000 (2) | 0.000 | 0.000 |
C1 | 0.042 (3) | 0.035 (2) | 0.045 (3) | −0.004 (2) | 0.009 (2) | 0.012 (2) |
C2 | 0.043 (3) | 0.036 (2) | 0.044 (3) | 0.012 (2) | −0.002 (2) | 0.012 (2) |
Geometric parameters (Å, º) top
Ge—F2i | 1.798 (2) | N1—C1 | 1.460 (5) |
Ge—F2ii | 1.798 (2) | N1—H1A | 0.9000 |
Ge—F2 | 1.798 (2) | N1—H1B | 0.9000 |
Ge—F2iii | 1.798 (2) | N2—C2iv | 1.471 (5) |
Ge—F1ii | 1.799 (4) | N2—C2 | 1.471 (5) |
Ge—F1 | 1.799 (4) | N2—H2A | 0.9100 |
Ni—N1iii | 2.110 (3) | C1—C2 | 1.542 (7) |
Ni—N1iv | 2.110 (3) | C1—H1C | 0.9700 |
Ni—N1v | 2.110 (3) | C1—H1D | 0.9700 |
Ni—N1 | 2.110 (3) | C2—H2B | 0.9700 |
Ni—N2 | 2.112 (4) | C2—H2C | 0.9700 |
Ni—N2v | 2.112 (4) | | |
| | | |
F2i—Ge—F2ii | 90.2 (2) | N1—Ni—N2v | 96.9 (1) |
F2i—Ge—F2 | 89.8 (2) | N2—Ni—N2v | 180.0 |
F2ii—Ge—F2 | 180.0 | C1—N1—Ni | 111.1 (2) |
F2i—Ge—F2iii | 180.0 | C1—N1—H1A | 109.4 |
F2ii—Ge—F2iii | 89.8 (2) | Ni—N1—H1A | 109.4 |
F2—Ge—F2iii | 90.2 (2) | C1—N1—H1B | 109.4 |
F2i—Ge—F1ii | 90.6 (1) | Ni—N1—H1B | 109.4 |
F2ii—Ge—F1ii | 89.4 (1) | H1A—N1—H1B | 108.0 |
F2—Ge—F1ii | 90.6 (1) | C2iv—N2—C2 | 116.9 (5) |
F2iii—Ge—F1ii | 89.4 (1) | C2iv—N2—Ni | 107.6 (3) |
F2i—Ge—F1 | 89.5 (1) | C2—N2—Ni | 107.6 (3) |
F2ii—Ge—F1 | 90.6 (1) | C2iv—N2—H2A | 108.2 |
F2—Ge—F1 | 89.4 (1) | C2—N2—H2A | 108.2 |
F2iii—Ge—F1 | 90.6 (1) | Ni—N2—H2A | 108.2 |
F1ii—Ge—F1 | 180.0 | N1—C1—C2 | 110.3 (3) |
N1iii—Ni—N1iv | 180.0 | N1—C1—H1C | 109.6 |
N1iii—Ni—N1v | 90.6 (2) | C2—C1—H1C | 109.6 |
N1iv—Ni—N1v | 89.4 (2) | N1—C1—H1D | 109.6 |
N1iii—Ni—N1 | 89.4 (2) | C2—C1—H1D | 109.6 |
N1iv—Ni—N1 | 90.6 (2) | H1C—C1—H1D | 108.1 |
N1v—Ni—N1 | 180.0 | N2—C2—C1 | 112.2 (4) |
N1iii—Ni—N2 | 96.9 (1) | N2—C2—H2B | 109.2 |
N1iv—Ni—N2 | 83.1 (1) | C1—C2—H2B | 109.2 |
N1v—Ni—N2 | 96.9 (1) | N2—C2—H2C | 109.2 |
N1—Ni—N2 | 83.1 (1) | C1—C2—H2C | 109.2 |
N1iii—Ni—N2v | 83.1 (1) | H2B—C2—H2C | 107.9 |
N1iv—Ni—N2v | 96.9 (1) | N1—C1—C2 | 110.3 (3) |
N1v—Ni—N2v | 83.1 (1) | N2—C2—C1 | 112.2 (4) |
Symmetry codes: (i) x, y, −z+2; (ii) −x+1/2, −y+1/2, −z+2; (iii) −x+1/2, −y+1/2, z; (iv) x, y, −z+1; (v) −x+1/2, −y+1/2, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1B···F1vi | 0.90 | 2.24 | 3.060 (4) | 152 |
N1—H1B···F2vi | 0.90 | 2.37 | 3.099 (4) | 138 |
N1—H1A···F2ii | 0.90 | 2.23 | 3.123 (5) | 171 |
N2—H2A···F2vii | 0.91 | 2.39 | 3.180 (5) | 145 |
N2—H2A···F2viii | 0.91 | 2.39 | 3.180 (5) | 145 |
Symmetry codes: (ii) −x+1/2, −y+1/2, −z+2; (vi) x−1/2, −y+1/2, z−1/2; (vii) −x+1, y, z−1/2; (viii) −x+1, y, −z+3/2. |
Experimental details
Crystal data |
Chemical formula | [Ni(C4H13N3)2][GeF6] |
Mr | 451.65 |
Crystal system, space group | Orthorhombic, Cccm |
Temperature (K) | 293 |
a, b, c (Å) | 9.5937 (19), 15.193 (3), 10.819 (2) |
V (Å3) | 1576.9 (6) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 3.17 |
Crystal size (mm) | 0.48 × 0.40 × 0.22 |
|
Data collection |
Diffractometer | Bruker CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.238, 0.498 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 1847, 739, 536 |
Rint | 0.032 |
(sin θ/λ)max (Å−1) | 0.595 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.119, 1.16 |
No. of reflections | 739 |
No. of parameters | 57 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.59, −0.72 |
Selected geometric parameters (Å, º) topGe—F2 | 1.798 (2) | N1—C1 | 1.460 (5) |
Ge—F1 | 1.799 (4) | N2—C2 | 1.471 (5) |
Ni—N1 | 2.110 (3) | C1—C2 | 1.542 (7) |
Ni—N2 | 2.112 (4) | | |
| | | |
F2i—Ge—F2 | 180.0 | N1iv—Ni—N1 | 90.6 (2) |
F2i—Ge—F2ii | 89.8 (2) | N1ii—Ni—N2 | 96.9 (1) |
F2—Ge—F2ii | 90.2 (2) | N1—Ni—N2 | 83.1 (1) |
F2iii—Ge—F1 | 89.5 (1) | N1—Ni—N2v | 96.9 (1) |
F2—Ge—F1 | 89.4 (1) | N2—Ni—N2v | 180.0 |
F2ii—Ge—F1 | 90.6 (1) | C1—N1—Ni | 111.1 (2) |
F1i—Ge—F1 | 180.0 | C2iv—N2—C2 | 116.9 (5) |
N1ii—Ni—N1iv | 180.0 | N1—C1—C2 | 110.3 (3) |
N1ii—Ni—N1 | 89.4 (2) | N2—C2—C1 | 112.2 (4) |
Symmetry codes: (i) −x+1/2, −y+1/2, −z+2; (ii) −x+1/2, −y+1/2, z; (iii) x, y, −z+2; (iv) x, y, −z+1; (v) −x+1/2, −y+1/2, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1B···F1vi | 0.90 | 2.24 | 3.060 (4) | 152 |
N1—H1B···F2vi | 0.90 | 2.37 | 3.099 (4) | 138 |
N1—H1A···F2i | 0.90 | 2.23 | 3.123 (5) | 171 |
N2—H2A···F2vii | 0.91 | 2.39 | 3.180 (5) | 145 |
N2—H2A···F2viii | 0.91 | 2.39 | 3.180 (5) | 145 |
Symmetry codes: (i) −x+1/2, −y+1/2, −z+2; (vi) x−1/2, −y+1/2, z−1/2; (vii) −x+1, y, z−1/2; (viii) −x+1, y, −z+3/2. |
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Despite the rapid development in the syntheses of new materials, the field of fluorides remains undeveloped. More recently, fluoroaluminates such as (C4H12N2)(H3O)[Al3F12] (Tang et al., 2001c) and (C4H12N2)2[Al2F10]·2H2O (Tang et al., 2001 e), the fluorosilicate of (C4N2H12)[SiF6] (Tang et al., 2001f) and fluorotitanates such as (C5H6N)2(H3O)[Ti2F11]·H2O (Tang et al., 2001 d), (C4N2H14)[TiF4O] (Tang et al., 2001a), (C4H12N2)[TiF5(H2O)]2 (Tang et al., 2001b) and (C4H12N2)2[Ti2F10O]·2H2O (Dadachov et al., 2001) have been reported. In those fluorides, the central Al, Si and Ti atoms are all completely coordinated by F atoms. Whereas considerably less work has been done on fluorogermanates, with only a few GeIV fluorides, viz. K2[cis-(CF3)2GeF4] (Brauer et al., 1980), [(CH3)4N][(CF3)3GeF2] (Braueret al., 1986) and N(CH2CH2O)3GeF (Lukevics et al., 1997), structurally characterized. All these fluorogermanates are coordinated by mixed ligands. Recently, the use of hydrofluoric acid as a mineralizing agent in the synthesis of zeolite materials with novel architectures has attracted much attention (Li et al., 1998; Plevert et al., 2001). As part of our interest in the borogermanate microporous materials, we tried to prepare novel open frameworks using organic amines in the presence of hydrofluoric acid. Unexpectedly, the novel title compound, (I), was obtained, which is the first structure of its kind.
The title compound (Fig. 1) is composed of [GeF6]2− anions and [Ni(dien)2]2+ cations. As to the anion of [GeF6]2−, each germanium center is coordinated by six fluoride ligands, resulting in an octahedral geometry, with Ge—F distances in the range 1.798 (2)–1.799 (4) Å, which is consistent with K2GeF6 (Ge—F = 1.77 Å; Hoard & Vincent, 1939), other fluorogermanates (Taylor & Wilson, 1973), and [(CH3)4N][(CF3)3GeF2] (Brauer et al., 1986), and F—Ge—F angles between 89.4 (1) and 180°. The nickel cation displays distorted octahedral geometry and is bonded to six N atoms of two diethylene triamines with Ni—N distances in the range 2.110 (2)–2.112 (4) Å, and N—Ni—N angles in the range 83.1 (1)—180°. Like [Co(dien)2]2+ (Keene & Searle, 1974), [Ni(dien)2]2+ has also s-cis, u-cis and trans configurations, and the latter two are chiral. In the title compound, there is only one unique Ni site of s-cis-[Ni(dien)2]2+. The [GeF6]2− anions interact with [Ni(dien)2] 2+ cations both electrostatically and through weak hydrogen bonds. The hydrogen bonds are formed between the F and N atoms, with F···N distances in the range 3.060 (4)–3.180 (5) Å.