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The crystal structures of three mackinazolinone derivatives (2-amino-6,7,8,9-tetra­hydro-11H-pyrido[2,1-b]quinazolin-11-one at room temperature, and 2-nitro-6,7,8,9-tetra­hydro-11H-pyrido[2,1-b]quinazolin-11-one and N-(11-oxo-6,8,9,11-tetra­hydro-7H-pyrido[2,1-b]quinazolin-2-yl)benzamide at 100 K) are explored using X-ray crystallography. To delineate the different intermolecular interactions and the respective interaction energies in the crystal architectures, energy framework analyses were carried out using the CE-B3LYP/6-31G(d,p) method implemented in the CrystalExplorer software. In the structures the different molecules are linked by C—H...O, C—H...N and N—H...O hydrogen bonds. Together with these hydrogen bonds, C—H...π and C—O...π interactions are involved in the formation of a three-dimensional crystal network. A Hirshfeld surface analysis allows the visualization of the two-dimensional fingerprint plots and the quantification of the contributions of H...H, H...C/C...H and H...O/O...H contacts throughout the different crystal structures. To obtain additional information on the intrinsic properties of our targets and to compare the experimental crystal structures with their respective conformations in the gas phase, quantum chemical calculations at the B3LYP-D3BJ/6-311++G(d,p) level of theory, including Grimme's D3 correction term and BJ damping functions, were carried out to account for intramolecular dispersion inter­actions. The identified energy gaps between the highest occupied and the lowest unoccupied molecular orbitals (HOMO–LUMO gap) of our targets in the gas phase and in two implicit solvents (methanol and di­methyl sulfoxide) allow us to quantify the impact of different substituents on the reactivity of mackinazolinone derivatives.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S2052520621003498/bm5137sup1.cif
Contains datablocks 2, 3, 4

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2052520621003498/bm51372sup2.hkl
Contains datablock 2

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2052520621003498/bm51373sup3.hkl
Contains datablock 3

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2052520621003498/bm51374sup4.hkl
Contains datablock 4

pdf

Portable Document Format (PDF) file https://doi.org/10.1107/S2052520621003498/bm5137sup5.pdf
Tables S1 to S17 and Figs S1 to S5

CCDC references: 2074781; 2074782; 2074783

Computing details top

For all structures, data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell refinement: CrysAlis PRO (Oxford Diffraction, 2009); data reduction: CrysAlis PRO (Oxford Diffraction, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL2018/3 (Sheldrick, 2018). Molecular graphics: PLATON (Spek, 2020) for (2), (4); PLATON (Spek, 2009) for (3). Software used to prepare material for publication: publCIF (Westrip, 2010) for (2), (4).

(2) top
Crystal data top
C12H13N3OF(000) = 456
Mr = 215.25Dx = 1.361 Mg m3
Monoclinic, P21/nCu Kα radiation, λ = 1.54184 Å
a = 9.6282 (3) ÅCell parameters from 1630 reflections
b = 9.5416 (4) Åθ = 3.9–75.5°
c = 11.6064 (4) ŵ = 0.73 mm1
β = 99.863 (3)°T = 298 K
V = 1050.50 (7) Å3Rod, colourless
Z = 40.20 × 0.20 × 0.20 mm
Data collection top
Xcalibur, Ruby
diffractometer
2124 independent reflections
Radiation source: Enhance (Cu) X-ray Source1439 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.026
Detector resolution: 10.2576 pixels mm-1θmax = 75.6°, θmin = 5.5°
ω scansh = 119
Absorption correction: multi-scan
CrysAlisPro, Oxford Diffraction, 2009
k = 1110
Tmin = 0.881, Tmax = 1.000l = 1314
4385 measured reflections
Refinement top
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.056H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.173 w = 1/[σ2(Fo2) + (0.0917P)2 + 0.143P]
where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max < 0.001
2124 reflectionsΔρmax = 0.38 e Å3
152 parametersΔρmin = 0.20 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O0.56471 (18)0.1894 (2)0.45187 (15)0.0694 (6)
N'0.0906 (2)0.3549 (3)0.5509 (2)0.0620 (6)
H1A'0.037 (3)0.403 (3)0.597 (3)0.077 (9)*
H1B'0.097 (4)0.393 (4)0.471 (4)0.115*
C10.3202 (2)0.2522 (2)0.54959 (17)0.0475 (5)
H10.3156030.2765790.4714430.057*
C20.2111 (2)0.2883 (2)0.60774 (19)0.0475 (5)
C30.2217 (2)0.2515 (3)0.72608 (19)0.0522 (6)
H30.1507650.2779930.7667830.063*
C40.3342 (2)0.1776 (3)0.78212 (19)0.0525 (6)
H40.3376990.1524240.8599660.063*
C4A0.4454 (2)0.1388 (2)0.72413 (18)0.0446 (5)
N50.55998 (17)0.0647 (2)0.78495 (16)0.0495 (5)
C5A0.6664 (2)0.0421 (2)0.7317 (2)0.0469 (5)
C60.7900 (2)0.0381 (3)0.7958 (2)0.0596 (6)
H6A0.7781910.1366670.7762120.071*
H6B0.7921780.0285700.8793090.071*
C70.9294 (2)0.0125 (3)0.7662 (2)0.0619 (7)
H7A0.9452050.1097130.7891790.074*
H7B1.0064340.0431820.8074890.074*
C80.9218 (2)0.0025 (3)0.6360 (3)0.0674 (7)
H8A1.0104490.0276900.6151880.081*
H8B0.9084240.1005020.6147540.081*
C90.8036 (2)0.0821 (3)0.5678 (2)0.0582 (6)
H9A0.8365170.1773250.5608260.070*
H9B0.7808560.0435740.4895400.070*
N100.67213 (17)0.08683 (19)0.61957 (16)0.0472 (5)
C110.5587 (2)0.1536 (2)0.55063 (19)0.0481 (5)
C11A0.4374 (2)0.1791 (2)0.60824 (17)0.0429 (5)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O0.0717 (11)0.0925 (14)0.0493 (9)0.0214 (10)0.0251 (8)0.0157 (9)
N'0.0526 (11)0.0819 (16)0.0495 (11)0.0195 (11)0.0031 (9)0.0031 (11)
C10.0518 (12)0.0556 (13)0.0338 (10)0.0024 (11)0.0035 (8)0.0003 (9)
C20.0415 (10)0.0528 (13)0.0464 (11)0.0000 (10)0.0028 (9)0.0083 (10)
C30.0430 (11)0.0683 (16)0.0461 (12)0.0027 (11)0.0101 (9)0.0045 (11)
C40.0480 (11)0.0713 (16)0.0388 (11)0.0001 (11)0.0090 (9)0.0037 (11)
C4A0.0421 (10)0.0501 (12)0.0406 (11)0.0016 (9)0.0042 (8)0.0022 (9)
N50.0407 (9)0.0599 (12)0.0469 (10)0.0006 (8)0.0046 (8)0.0063 (9)
C5A0.0450 (11)0.0452 (12)0.0483 (12)0.0007 (10)0.0015 (9)0.0026 (10)
C60.0522 (13)0.0580 (15)0.0658 (16)0.0084 (11)0.0024 (11)0.0081 (12)
C70.0465 (12)0.0640 (15)0.0720 (17)0.0043 (12)0.0006 (11)0.0000 (13)
C80.0482 (13)0.0771 (18)0.0766 (18)0.0041 (13)0.0099 (12)0.0082 (15)
C90.0510 (12)0.0662 (15)0.0608 (15)0.0033 (12)0.0196 (11)0.0003 (12)
N100.0422 (9)0.0493 (10)0.0509 (10)0.0041 (8)0.0099 (8)0.0000 (8)
C110.0530 (12)0.0523 (13)0.0389 (11)0.0020 (10)0.0077 (9)0.0018 (9)
C11A0.0427 (10)0.0452 (11)0.0401 (11)0.0015 (9)0.0052 (8)0.0033 (9)
Geometric parameters (Å, º) top
O—C111.207 (3)N5—C5A1.302 (3)
N'—C21.387 (3)C5A—N101.380 (3)
C1—C21.386 (3)C5A—C61.500 (3)
C1—C11A1.399 (3)C6—C71.520 (3)
C2—C31.404 (3)C7—C81.507 (4)
C3—C41.360 (3)C8—C91.505 (4)
C4—C4A1.408 (3)C9—N101.491 (3)
C4A—C11A1.388 (3)N10—C111.392 (3)
C4A—N51.396 (3)C11—C11A1.463 (3)
C2—C1—C11A120.12 (19)C5A—C6—C7112.4 (2)
C1—C2—N'121.7 (2)C8—C7—C6107.7 (2)
C1—C2—C3118.68 (19)C9—C8—C7112.2 (2)
N'—C2—C3119.6 (2)N10—C9—C8114.9 (2)
C4—C3—C2121.1 (2)C5A—N10—C11121.96 (18)
C3—C4—C4A121.0 (2)C5A—N10—C9122.97 (18)
C11A—C4A—N5122.55 (19)C11—N10—C9114.74 (18)
C11A—C4A—C4118.00 (19)O—C11—N10121.0 (2)
N5—C4A—C4119.44 (19)O—C11—C11A124.0 (2)
C5A—N5—C4A117.51 (18)N10—C11—C11A115.02 (18)
N5—C5A—N10123.95 (19)C4A—C11A—C1121.04 (19)
N5—C5A—C6118.1 (2)C4A—C11A—C11118.73 (19)
N10—C5A—C6118.0 (2)C1—C11A—C11120.07 (19)
C11A—C1—C2—N'177.0 (2)N5—C5A—N10—C9169.0 (2)
C11A—C1—C2—C30.7 (3)C6—C5A—N10—C911.4 (3)
C1—C2—C3—C42.3 (4)C8—C9—N10—C5A12.5 (3)
N'—C2—C3—C4175.5 (2)C8—C9—N10—C11174.0 (2)
C2—C3—C4—C4A1.6 (4)C5A—N10—C11—O178.5 (2)
C3—C4—C4A—C11A0.5 (3)C9—N10—C11—O7.9 (3)
C3—C4—C4A—N5179.1 (2)C5A—N10—C11—C11A3.2 (3)
C11A—C4A—N5—C5A4.8 (3)C9—N10—C11—C11A170.37 (19)
C4—C4A—N5—C5A173.7 (2)N5—C4A—C11A—C1179.4 (2)
C4A—N5—C5A—N100.1 (3)C4—C4A—C11A—C12.1 (3)
C4A—N5—C5A—C6179.7 (2)N5—C4A—C11A—C115.3 (3)
N5—C5A—C6—C7145.6 (2)C4—C4A—C11A—C11173.2 (2)
N10—C5A—C6—C734.8 (3)C2—C1—C11A—C4A1.4 (3)
C5A—C6—C7—C858.3 (3)C2—C1—C11A—C11173.8 (2)
C6—C7—C8—C959.8 (3)O—C11—C11A—C4A177.0 (2)
C7—C8—C9—N1037.3 (3)N10—C11—C11A—C4A1.2 (3)
N5—C5A—N10—C114.0 (3)O—C11—C11A—C11.7 (4)
C6—C5A—N10—C11175.6 (2)N10—C11—C11A—C1176.57 (19)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N—H1A···N5i0.93 (3)2.36 (3)3.268 (3)167 (3)
N—H1B···N5ii1.00 (4)2.17 (4)3.146 (3)164 (3)
C3—H3···Oiii0.932.453.291 (3)150
Symmetry codes: (i) x+1/2, y+1/2, z+3/2; (ii) x1/2, y+1/2, z1/2; (iii) x1/2, y+1/2, z+1/2.
(3) top
Crystal data top
C12H11N3O3F(000) = 512
Mr = 245.24Dx = 1.494 Mg m3
Monoclinic, P21/nCu Kα radiation, λ = 1.54184 Å
a = 13.0177 (3) ÅCell parameters from 2233 reflections
b = 5.6433 (14) Åθ = 3.5–75.5°
c = 15.4366 (4) ŵ = 0.92 mm1
β = 105.949 (3)°T = 100 K
V = 1090.4 (3) Å3Plate, colourless
Z = 40.50 × 0.40 × 0.15 mm
Data collection top
Xcalibur, Ruby
diffractometer
2226 independent reflections
Radiation source: Enhance (Cu) X-ray Source1777 reflections with I > 2σ(I)
Detector resolution: 10.2576 pixels mm-1Rint = 0.023
ω scansθmax = 75.7°, θmin = 4.0°
Absorption correction: multi-scan
CrysAlisPro, Oxford Diffraction, 2009
h = 1216
Tmin = 0.710, Tmax = 1.000k = 46
4411 measured reflectionsl = 1915
Refinement top
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.040H-atom parameters constrained
wR(F2) = 0.118 w = 1/[σ2(Fo2) + (0.0746P)2 + 0.0703P]
where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
2226 reflectionsΔρmax = 0.29 e Å3
163 parametersΔρmin = 0.24 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O0.33031 (8)0.32586 (19)0.26740 (7)0.0253 (3)
O'10.61695 (9)0.0346 (3)0.13807 (8)0.0403 (3)
O'20.71362 (9)0.2653 (2)0.19815 (8)0.0344 (3)
N'0.64191 (10)0.1218 (3)0.19517 (8)0.0270 (3)
C10.50654 (11)0.0287 (3)0.26350 (9)0.0211 (3)
H10.4959100.1600670.2235160.025*
C20.58166 (10)0.1408 (3)0.26255 (9)0.0210 (3)
C30.60190 (11)0.3344 (3)0.32164 (10)0.0220 (3)
H30.6550000.4478490.3193700.026*
C40.54309 (11)0.3569 (3)0.38326 (9)0.0207 (3)
H40.5565160.4852560.4246650.025*
C4A0.46322 (10)0.1898 (2)0.38484 (9)0.0178 (3)
N50.40190 (9)0.2257 (2)0.44384 (8)0.0191 (3)
C5A0.32489 (10)0.0765 (2)0.44146 (9)0.0181 (3)
C60.25885 (11)0.1215 (3)0.50637 (9)0.0210 (3)
H6A0.2532740.2947030.5141510.025*
H6B0.2966910.0538830.5657470.025*
C70.14660 (11)0.0174 (3)0.47687 (10)0.0256 (3)
H7A0.1115160.0323550.5259660.031*
H7B0.1029380.1030730.4234050.031*
C80.15657 (12)0.2414 (3)0.45431 (10)0.0257 (3)
H8A0.0851300.3166110.4388140.031*
H8B0.2024890.3242030.5074840.031*
C90.20458 (11)0.2650 (3)0.37553 (10)0.0228 (3)
H9A0.2232400.4331540.3695200.027*
H9B0.1503090.2188120.3194670.027*
N100.30152 (9)0.1171 (2)0.38558 (8)0.0183 (3)
C110.35736 (11)0.1648 (3)0.32178 (9)0.0196 (3)
C11A0.44587 (10)0.0026 (2)0.32518 (9)0.0180 (3)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O0.0293 (5)0.0234 (5)0.0239 (5)0.0033 (4)0.0087 (4)0.0074 (4)
O'10.0335 (6)0.0644 (9)0.0275 (6)0.0036 (6)0.0162 (5)0.0176 (6)
O'20.0334 (6)0.0417 (7)0.0361 (7)0.0019 (5)0.0227 (5)0.0018 (5)
N'0.0225 (6)0.0400 (8)0.0202 (6)0.0056 (5)0.0087 (5)0.0003 (6)
C10.0210 (6)0.0254 (7)0.0158 (6)0.0055 (6)0.0035 (5)0.0024 (6)
C20.0184 (6)0.0299 (8)0.0162 (6)0.0068 (6)0.0074 (5)0.0020 (6)
C30.0182 (6)0.0261 (7)0.0228 (7)0.0004 (6)0.0073 (5)0.0024 (6)
C40.0211 (6)0.0212 (7)0.0210 (7)0.0004 (5)0.0076 (5)0.0029 (5)
C4A0.0181 (6)0.0195 (7)0.0159 (6)0.0026 (5)0.0048 (5)0.0001 (5)
N50.0205 (6)0.0202 (6)0.0180 (6)0.0003 (5)0.0080 (4)0.0019 (5)
C5A0.0197 (6)0.0188 (7)0.0161 (6)0.0026 (5)0.0056 (5)0.0011 (5)
C60.0229 (7)0.0218 (7)0.0209 (7)0.0001 (5)0.0105 (5)0.0018 (6)
C70.0212 (7)0.0325 (8)0.0259 (7)0.0006 (6)0.0110 (6)0.0001 (6)
C80.0256 (7)0.0292 (8)0.0239 (7)0.0073 (6)0.0094 (6)0.0002 (6)
C90.0251 (7)0.0223 (7)0.0218 (7)0.0063 (6)0.0079 (5)0.0005 (6)
N100.0194 (5)0.0186 (6)0.0171 (5)0.0014 (5)0.0055 (4)0.0009 (5)
C110.0213 (6)0.0196 (7)0.0172 (6)0.0025 (5)0.0043 (5)0.0001 (5)
C11A0.0180 (6)0.0199 (7)0.0160 (6)0.0037 (5)0.0042 (5)0.0005 (5)
Geometric parameters (Å, º) top
O—C111.2218 (17)C4A—C11A1.4013 (19)
O'1—N'1.2264 (18)N5—C5A1.3018 (18)
O'2—N'1.2272 (17)C5A—N101.3737 (18)
N'—C21.4687 (16)C5A—C61.5102 (17)
C1—C21.371 (2)C6—C71.5238 (19)
C1—C11A1.4020 (18)C7—C81.515 (2)
C2—C31.401 (2)C8—C91.5182 (19)
C3—C41.3811 (18)C9—N101.4851 (17)
C4—C4A1.4088 (19)N10—C111.4015 (16)
C4A—N51.3812 (16)C11—C11A1.4608 (19)
O'1—N'—O'2123.41 (12)N10—C5A—C6118.82 (12)
O'1—N'—C2118.29 (13)C5A—C6—C7114.27 (12)
O'2—N'—C2118.29 (13)C8—C7—C6107.72 (12)
C2—C1—C11A118.07 (13)C7—C8—C9110.43 (12)
C1—C2—C3122.97 (12)N10—C9—C8113.07 (11)
C1—C2—N'118.55 (13)C5A—N10—C11121.71 (12)
C3—C2—N'118.47 (13)C5A—N10—C9123.23 (11)
C4—C3—C2118.66 (13)C11—N10—C9114.13 (11)
C3—C4—C4A120.11 (13)O—C11—N10121.21 (13)
N5—C4A—C11A121.95 (12)O—C11—C11A124.50 (13)
N5—C4A—C4118.43 (12)N10—C11—C11A114.26 (12)
C11A—C4A—C4119.59 (12)C4A—C11A—C1120.56 (13)
C5A—N5—C4A117.81 (12)C4A—C11A—C11119.48 (12)
N5—C5A—N10124.63 (12)C1—C11A—C11119.72 (13)
N5—C5A—C6116.55 (12)
C11A—C1—C2—C31.6 (2)N5—C5A—N10—C113.1 (2)
C11A—C1—C2—N'176.95 (12)C6—C5A—N10—C11177.88 (12)
O'1—N'—C2—C15.5 (2)N5—C5A—N10—C9171.42 (12)
O'2—N'—C2—C1175.52 (13)C6—C5A—N10—C99.57 (19)
O'1—N'—C2—C3173.09 (13)C8—C9—N10—C5A20.92 (19)
O'2—N'—C2—C35.9 (2)C8—C9—N10—C11169.96 (12)
C1—C2—C3—C40.5 (2)C5A—N10—C11—O173.86 (13)
N'—C2—C3—C4178.02 (12)C9—N10—C11—O4.55 (19)
C2—C3—C4—C4A1.2 (2)C5A—N10—C11—C11A4.33 (18)
C3—C4—C4A—N5176.29 (12)C9—N10—C11—C11A173.64 (11)
C3—C4—C4A—C11A1.7 (2)N5—C4A—C11A—C1177.31 (12)
C11A—C4A—N5—C5A1.33 (19)C4—C4A—C11A—C10.6 (2)
C4—C4A—N5—C5A176.63 (12)N5—C4A—C11A—C112.94 (19)
C4A—N5—C5A—N101.3 (2)C4—C4A—C11A—C11175.00 (12)
C4A—N5—C5A—C6179.62 (11)C2—C1—C11A—C4A1.0 (2)
N5—C5A—C6—C7155.44 (13)C2—C1—C11A—C11173.38 (12)
N10—C5A—C6—C725.47 (18)O—C11—C11A—C4A173.87 (13)
C5A—C6—C7—C851.56 (16)N10—C11—C11A—C4A4.26 (18)
C6—C7—C8—C963.01 (16)O—C11—C11A—C10.5 (2)
C7—C8—C9—N1047.86 (17)N10—C11—C11A—C1178.67 (12)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C3—H3···O2i0.952.543.4899 (19)175
C4—H4···N5ii0.952.543.4834 (19)170
C9—H9B···Oiii0.992.643.2659 (18)121
Symmetry codes: (i) x+3/2, y+1/2, z+1/2; (ii) x+1, y+1, z+1; (iii) x+1/2, y+1/2, z+1/2.
(4) top
Crystal data top
C19H17N3O2F(000) = 1344
Mr = 319.35Dx = 1.376 Mg m3
Monoclinic, P21/nCu Kα radiation, λ = 1.54184 Å
a = 10.6548 (3) ÅCell parameters from 4480 reflections
b = 12.6232 (3) Åθ = 3.5–75.7°
c = 22.9326 (6) ŵ = 0.74 mm1
β = 91.457 (3)°T = 100 K
V = 3083.38 (14) Å3Prismatic, colourless
Z = 80.30 × 0.20 × 0.20 mm
Data collection top
Xcalibur, Ruby
diffractometer
6257 independent reflections
Radiation source: Enhance (Cu) X-ray Source4394 reflections with I > 2σ(I)
Detector resolution: 10.2576 pixels mm-1Rint = 0.037
ω scansθmax = 75.8°, θmin = 3.9°
Absorption correction: multi-scan
CrysAlisPro, Oxford Diffraction, 2009
h = 139
Tmin = 0.798, Tmax = 1.000k = 915
13441 measured reflectionsl = 2828
Refinement top
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.045H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.118 w = 1/[σ2(Fo2) + (0.0697P)2]
where P = (Fo2 + 2Fc2)/3
S = 0.97(Δ/σ)max < 0.001
6257 reflectionsΔρmax = 0.23 e Å3
440 parametersΔρmin = 0.27 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N'0.20635 (14)0.06986 (11)0.01815 (7)0.0177 (3)
H1A'0.243 (2)0.1357 (17)0.0176 (9)0.031 (6)*
O'0.20915 (12)0.10014 (9)0.01560 (5)0.0216 (3)
C10.04761 (16)0.03155 (13)0.07541 (7)0.0169 (3)
H10.0703090.0960160.0565550.020*
C1'0.37132 (16)0.01400 (13)0.05138 (7)0.0173 (4)
O10.08754 (12)0.21519 (9)0.11290 (5)0.0218 (3)
C20.10840 (16)0.06185 (13)0.06059 (7)0.0165 (3)
C2'0.43847 (17)0.10833 (14)0.04804 (8)0.0203 (4)
H2'0.4069110.1649210.0246180.024*
C30.07318 (17)0.15684 (13)0.08966 (7)0.0185 (4)
H30.1150320.2210740.0797850.022*
C3'0.55187 (18)0.11987 (14)0.07898 (8)0.0225 (4)
H3'0.5976160.1842570.0765740.027*
C40.02049 (17)0.15734 (13)0.13186 (7)0.0189 (4)
H40.0426690.2218180.1508400.023*
C4'0.59791 (18)0.03771 (14)0.11319 (8)0.0240 (4)
H4'0.6760610.0452460.1336420.029*
C4A0.08388 (17)0.06353 (13)0.14727 (7)0.0175 (4)
N50.17937 (14)0.06669 (11)0.18972 (6)0.0182 (3)
C5'0.53021 (19)0.05577 (15)0.11772 (8)0.0250 (4)
H5'0.5611610.1115050.1419190.030*
C5A0.23902 (17)0.02073 (13)0.20157 (7)0.0176 (4)
C60.34776 (17)0.01584 (13)0.24478 (8)0.0209 (4)
H6A0.4218150.0128910.2249010.025*
H6B0.3265480.0340870.2763290.025*
C6'0.41745 (18)0.06779 (14)0.08693 (8)0.0223 (4)
H6'0.3713690.1318940.0900140.027*
C70.38289 (18)0.12224 (14)0.27193 (8)0.0219 (4)
H7A0.3162060.1459060.2982480.026*
H7B0.4622600.1156650.2950410.026*
C80.39839 (18)0.20187 (14)0.22323 (8)0.0224 (4)
H8A0.4284430.2700870.2396650.027*
H8B0.4616930.1758080.1958050.027*
C90.27460 (17)0.21828 (13)0.19110 (8)0.0218 (4)
H9A0.2189140.2609470.2158060.026*
H9B0.2892900.2590780.1550420.026*
N100.21016 (14)0.11761 (11)0.17538 (6)0.0176 (3)
C110.11300 (16)0.12743 (13)0.13402 (7)0.0168 (3)
C11A0.04797 (16)0.02991 (13)0.11862 (7)0.0161 (3)
C120.25443 (17)0.01106 (13)0.01536 (7)0.0174 (4)
O'A1.12370 (12)0.57114 (9)0.13152 (5)0.0214 (3)
N'A0.99853 (14)0.43176 (11)0.10650 (7)0.0187 (3)
H'A0.9816 (19)0.3648 (16)0.1111 (8)0.022*
C1A0.84051 (16)0.41220 (13)0.03504 (7)0.0167 (3)
H1A0.8500200.3376260.0383180.020*
O1A0.68461 (12)0.28595 (9)0.03716 (5)0.0214 (3)
C1'A1.15860 (16)0.40492 (14)0.17763 (7)0.0190 (4)
C2A0.91416 (16)0.47886 (13)0.06757 (7)0.0171 (4)
C2'A1.16697 (18)0.29544 (15)0.17028 (8)0.0251 (4)
H2'A1.1333190.2628170.1367770.030*
C3A0.89915 (17)0.58995 (13)0.06187 (7)0.0182 (4)
H3A0.9505110.6364260.0834600.022*
C3'A1.2246 (2)0.23461 (15)0.21209 (9)0.0307 (5)
H3'A1.2292830.1599770.2071510.037*
C4AA0.81077 (18)0.63121 (13)0.02532 (8)0.0203 (4)
H4AA0.8007400.7058010.0225210.024*
C4AB0.73542 (17)0.56399 (13)0.00782 (7)0.0175 (4)
C4'A1.27577 (18)0.28063 (16)0.26117 (8)0.0270 (4)
H4'A1.3143020.2379640.2897700.032*
N5A0.64844 (14)0.60700 (11)0.04506 (6)0.0205 (3)
C5AB0.58566 (16)0.54345 (13)0.07766 (7)0.0180 (4)
C5'A1.26976 (19)0.38956 (16)0.26775 (8)0.0270 (4)
H5'A1.3055140.4222340.3007430.032*
C6'A1.21170 (18)0.45089 (15)0.22629 (8)0.0241 (4)
H6'A1.2080540.5255750.2311570.029*
C6A0.49754 (18)0.59253 (14)0.12060 (8)0.0236 (4)
H6AA0.4473640.6476320.0999990.028*
H6AB0.5485430.6284160.1514120.028*
C7A0.40798 (18)0.51692 (14)0.14971 (8)0.0251 (4)
H7AA0.3715630.5512880.1842060.030*
H7AB0.3385100.4979920.1221680.030*
C8A0.47884 (19)0.41812 (15)0.16823 (8)0.0275 (4)
H8AA0.5497520.4375580.1948470.033*
H8AB0.4223670.3702240.1894820.033*
C9A0.52811 (19)0.36190 (14)0.11529 (9)0.0259 (4)
H9AA0.5841580.3034830.1282770.031*
H9AB0.4567280.3303850.0929090.031*
N10A0.59807 (14)0.43378 (11)0.07662 (6)0.0185 (3)
C11C0.67862 (16)0.38367 (13)0.03843 (7)0.0171 (4)
C11B0.75229 (16)0.45387 (13)0.00259 (7)0.0166 (4)
C12A1.09334 (16)0.47725 (13)0.13591 (7)0.0187 (4)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N'0.0183 (7)0.0102 (7)0.0246 (7)0.0015 (6)0.0028 (6)0.0005 (6)
O'0.0247 (7)0.0123 (6)0.0278 (6)0.0012 (5)0.0027 (6)0.0029 (5)
C10.0197 (9)0.0102 (8)0.0210 (8)0.0006 (7)0.0013 (7)0.0015 (7)
C1'0.0176 (8)0.0149 (8)0.0194 (8)0.0028 (7)0.0022 (7)0.0020 (7)
O10.0256 (7)0.0102 (6)0.0295 (7)0.0011 (5)0.0036 (5)0.0025 (5)
C20.0167 (8)0.0123 (8)0.0206 (8)0.0010 (7)0.0016 (7)0.0001 (7)
C2'0.0229 (9)0.0150 (8)0.0229 (8)0.0019 (7)0.0013 (7)0.0015 (7)
C30.0226 (9)0.0099 (8)0.0229 (8)0.0018 (7)0.0016 (7)0.0001 (7)
C3'0.0235 (9)0.0171 (8)0.0271 (9)0.0005 (7)0.0016 (8)0.0045 (8)
C40.0259 (9)0.0102 (8)0.0208 (8)0.0014 (7)0.0020 (7)0.0028 (7)
C4'0.0241 (10)0.0232 (9)0.0245 (9)0.0038 (8)0.0042 (8)0.0047 (8)
C4A0.0197 (9)0.0129 (8)0.0200 (8)0.0012 (7)0.0014 (7)0.0001 (7)
N50.0208 (8)0.0122 (7)0.0214 (7)0.0000 (6)0.0016 (6)0.0004 (6)
C5'0.0299 (10)0.0182 (9)0.0267 (9)0.0049 (8)0.0058 (8)0.0006 (8)
C5A0.0213 (9)0.0124 (8)0.0193 (8)0.0001 (7)0.0018 (7)0.0001 (7)
C60.0224 (9)0.0142 (8)0.0259 (9)0.0007 (7)0.0025 (8)0.0016 (7)
C6'0.0254 (10)0.0158 (8)0.0256 (9)0.0006 (7)0.0015 (8)0.0004 (7)
C70.0236 (9)0.0183 (9)0.0235 (9)0.0014 (7)0.0034 (7)0.0001 (8)
C80.0239 (9)0.0165 (8)0.0267 (9)0.0040 (7)0.0024 (8)0.0001 (8)
C90.0270 (10)0.0102 (8)0.0279 (9)0.0049 (7)0.0053 (8)0.0000 (7)
N100.0211 (8)0.0099 (7)0.0218 (7)0.0020 (6)0.0003 (6)0.0005 (6)
C110.0195 (8)0.0105 (8)0.0206 (8)0.0006 (7)0.0020 (7)0.0003 (7)
C11A0.0180 (8)0.0093 (8)0.0211 (8)0.0011 (7)0.0030 (7)0.0002 (7)
C120.0198 (9)0.0131 (8)0.0193 (8)0.0009 (7)0.0012 (7)0.0001 (7)
O'A0.0234 (7)0.0157 (6)0.0252 (6)0.0033 (5)0.0004 (5)0.0009 (5)
N'A0.0208 (8)0.0113 (7)0.0241 (7)0.0013 (6)0.0023 (6)0.0022 (6)
C1A0.0194 (8)0.0092 (7)0.0214 (8)0.0007 (7)0.0038 (7)0.0014 (7)
O1A0.0231 (7)0.0103 (6)0.0310 (7)0.0011 (5)0.0018 (6)0.0001 (5)
C1'A0.0170 (8)0.0179 (8)0.0218 (8)0.0014 (7)0.0027 (7)0.0007 (7)
C2A0.0178 (8)0.0136 (8)0.0196 (8)0.0023 (7)0.0016 (7)0.0022 (7)
C2'A0.0271 (10)0.0204 (9)0.0282 (9)0.0049 (8)0.0068 (8)0.0024 (8)
C3A0.0218 (9)0.0126 (8)0.0204 (8)0.0009 (7)0.0021 (7)0.0012 (7)
C3'A0.0345 (11)0.0193 (9)0.0386 (11)0.0070 (9)0.0078 (9)0.0008 (9)
C4AA0.0277 (10)0.0095 (8)0.0237 (9)0.0027 (7)0.0013 (8)0.0010 (7)
C4AB0.0201 (9)0.0110 (8)0.0214 (8)0.0019 (7)0.0023 (7)0.0017 (7)
C4'A0.0258 (10)0.0294 (10)0.0258 (9)0.0085 (8)0.0020 (8)0.0018 (8)
N5A0.0252 (8)0.0120 (7)0.0243 (7)0.0021 (6)0.0009 (7)0.0024 (6)
C5AB0.0197 (9)0.0116 (8)0.0226 (8)0.0020 (7)0.0017 (7)0.0018 (7)
C5'A0.0259 (10)0.0303 (10)0.0249 (9)0.0062 (8)0.0028 (8)0.0062 (8)
C6'A0.0230 (9)0.0204 (9)0.0288 (9)0.0027 (8)0.0004 (8)0.0035 (8)
C6A0.0258 (10)0.0166 (9)0.0287 (9)0.0042 (8)0.0043 (8)0.0029 (8)
C7A0.0258 (10)0.0206 (9)0.0293 (10)0.0046 (8)0.0056 (8)0.0002 (8)
C8A0.0278 (10)0.0253 (10)0.0297 (10)0.0011 (8)0.0062 (8)0.0037 (8)
C9A0.0282 (10)0.0148 (8)0.0351 (10)0.0001 (8)0.0101 (9)0.0033 (8)
N10A0.0187 (7)0.0116 (7)0.0254 (7)0.0000 (6)0.0025 (6)0.0001 (6)
C11C0.0174 (8)0.0104 (8)0.0232 (8)0.0016 (7)0.0045 (7)0.0022 (7)
C11B0.0189 (8)0.0105 (8)0.0201 (8)0.0006 (7)0.0039 (7)0.0019 (7)
C12A0.0184 (8)0.0156 (8)0.0220 (8)0.0004 (7)0.0042 (7)0.0021 (7)
Geometric parameters (Å, º) top
N'—C121.370 (2)O'A—C12A1.232 (2)
N'—C21.412 (2)N'A—C12A1.356 (2)
O'—C121.224 (2)N'A—C2A1.414 (2)
C1—C21.383 (2)C1A—C2A1.382 (2)
C1—C11A1.403 (2)C1A—C11B1.395 (2)
C1'—C2'1.392 (2)O1A—C11C1.235 (2)
C1'—C6'1.397 (2)C1'A—C6'A1.391 (2)
C1'—C121.510 (2)C1'A—C2'A1.395 (2)
O1—C111.236 (2)C1'A—C12A1.505 (2)
C2—C31.418 (2)C2A—C3A1.418 (2)
C2'—C3'1.393 (2)C2'A—C3'A1.384 (3)
C3—C41.372 (2)C3A—C4AA1.379 (2)
C3'—C4'1.383 (2)C3'A—C4'A1.390 (3)
C4—C4A1.404 (2)C4AA—C4AB1.405 (2)
C4'—C5'1.388 (3)C4AB—N5A1.387 (2)
C4A—N51.391 (2)C4AB—C11B1.407 (2)
C4A—C11A1.399 (2)C4'A—C5'A1.385 (3)
N5—C5A1.299 (2)N5A—C5AB1.294 (2)
C5'—C6'1.386 (3)C5AB—N10A1.391 (2)
C5A—N101.393 (2)C5AB—C6A1.511 (2)
C5A—C61.507 (2)C5'A—C6'A1.384 (3)
C6—C71.523 (2)C6A—C7A1.516 (2)
C7—C81.515 (2)C7A—C8A1.513 (2)
C8—C91.509 (2)C8A—C9A1.512 (2)
C9—N101.484 (2)C9A—N10A1.483 (2)
N10—C111.392 (2)N10A—C11C1.393 (2)
C11—C11A1.452 (2)C11C—C11B1.452 (2)
C12—N'—C2126.32 (15)C12A—N'A—C2A129.01 (15)
C2—C1—C11A119.21 (16)C2A—C1A—C11B120.34 (16)
C2'—C1'—C6'119.38 (17)C6'A—C1'A—C2'A118.97 (17)
C2'—C1'—C12124.52 (15)C6'A—C1'A—C12A117.44 (16)
C6'—C1'—C12115.93 (16)C2'A—C1'A—C12A123.59 (16)
C1—C2—N'124.30 (15)C1A—C2A—N'A117.62 (15)
C1—C2—C3119.24 (16)C1A—C2A—C3A119.04 (16)
N'—C2—C3116.46 (15)N'A—C2A—C3A123.30 (16)
C1'—C2'—C3'120.10 (16)C3'A—C2'A—C1'A119.61 (18)
C4—C3—C2120.96 (16)C4AA—C3A—C2A120.67 (16)
C4'—C3'—C2'120.07 (17)C2'A—C3'A—C4'A121.26 (18)
C3—C4—C4A120.67 (16)C3A—C4AA—C4AB120.62 (16)
C3'—C4'—C5'120.16 (18)N5A—C4AB—C4AA119.79 (15)
N5—C4A—C11A122.64 (16)N5A—C4AB—C11B121.87 (16)
N5—C4A—C4119.38 (15)C4AA—C4AB—C11B118.34 (16)
C11A—C4A—C4117.97 (16)C5'A—C4'A—C3'A119.03 (18)
C5A—N5—C4A117.87 (15)C5AB—N5A—C4AB118.44 (15)
C6'—C5'—C4'120.01 (17)N5A—C5AB—N10A123.80 (16)
N5—C5A—N10123.65 (16)N5A—C5AB—C6A117.46 (15)
N5—C5A—C6117.83 (15)N10A—C5AB—C6A118.70 (15)
N10—C5A—C6118.49 (15)C6'A—C5'A—C4'A120.06 (18)
C5A—C6—C7114.18 (15)C5'A—C6'A—C1'A121.05 (18)
C5'—C6'—C1'120.24 (17)C5AB—C6A—C7A115.93 (15)
C8—C7—C6108.30 (14)C8A—C7A—C6A109.10 (15)
C9—C8—C7109.93 (15)C9A—C8A—C7A110.03 (16)
N10—C9—C8113.22 (14)N10A—C9A—C8A112.52 (15)
C11—N10—C5A121.60 (14)C5AB—N10A—C11C121.52 (15)
C11—N10—C9114.88 (14)C5AB—N10A—C9A123.32 (15)
C5A—N10—C9123.45 (14)C11C—N10A—C9A115.16 (14)
O1—C11—N10119.92 (15)O1A—C11C—N10A120.07 (16)
O1—C11—C11A124.46 (16)O1A—C11C—C11B124.52 (16)
N10—C11—C11A115.62 (14)N10A—C11C—C11B115.41 (15)
C4A—C11A—C1121.94 (16)C1A—C11B—C4AB120.97 (16)
C4A—C11A—C11118.53 (16)C1A—C11B—C11C120.16 (15)
C1—C11A—C11119.52 (15)C4AB—C11B—C11C118.84 (16)
O'—C12—N'123.10 (16)O'A—C12A—N'A124.33 (17)
O'—C12—C1'120.64 (16)O'A—C12A—C1'A120.72 (16)
N'—C12—C1'116.23 (15)N'A—C12A—C1'A114.91 (15)
C11A—C1—C2—N'179.56 (15)C11B—C1A—C2A—N'A177.71 (15)
C11A—C1—C2—C30.4 (2)C11B—C1A—C2A—C3A0.3 (2)
C12—N'—C2—C11.4 (3)C12A—N'A—C2A—C1A168.46 (17)
C12—N'—C2—C3179.40 (16)C12A—N'A—C2A—C3A13.6 (3)
C6'—C1'—C2'—C3'1.3 (3)C6'A—C1'A—C2'A—C3'A1.7 (3)
C12—C1'—C2'—C3'173.78 (16)C12A—C1'A—C2'A—C3'A177.48 (17)
C1—C2—C3—C40.4 (3)C1A—C2A—C3A—C4AA1.3 (3)
N'—C2—C3—C4179.63 (16)N'A—C2A—C3A—C4AA176.67 (16)
C1'—C2'—C3'—C4'0.1 (3)C1'A—C2'A—C3'A—C4'A0.7 (3)
C2—C3—C4—C4A0.0 (3)C2A—C3A—C4AA—C4AB1.2 (3)
C2'—C3'—C4'—C5'1.2 (3)C3A—C4AA—C4AB—N5A178.95 (16)
C3—C4—C4A—N5179.27 (16)C3A—C4AA—C4AB—C11B0.2 (3)
C3—C4—C4A—C11A0.4 (3)C2'A—C3'A—C4'A—C5'A0.7 (3)
C11A—C4A—N5—C5A2.0 (3)C4AA—C4AB—N5A—C5AB175.89 (16)
C4—C4A—N5—C5A177.71 (16)C11B—C4AB—N5A—C5AB3.2 (2)
C3'—C4'—C5'—C6'1.4 (3)C4AB—N5A—C5AB—N10A1.6 (3)
C4A—N5—C5A—N101.9 (3)C4AB—N5A—C5AB—C6A176.18 (15)
C4A—N5—C5A—C6176.21 (15)C3'A—C4'A—C5'A—C6'A1.0 (3)
N5—C5A—C6—C7159.86 (16)C4'A—C5'A—C6'A—C1'A0.0 (3)
N10—C5A—C6—C721.9 (2)C2'A—C1'A—C6'A—C5'A1.4 (3)
C4'—C5'—C6'—C1'0.2 (3)C12A—C1'A—C6'A—C5'A177.85 (17)
C2'—C1'—C6'—C5'1.2 (3)N5A—C5AB—C6A—C7A168.85 (16)
C12—C1'—C6'—C5'174.33 (16)N10A—C5AB—C6A—C7A13.3 (2)
C5A—C6—C7—C851.1 (2)C5AB—C6A—C7A—C8A43.9 (2)
C6—C7—C8—C964.22 (19)C6A—C7A—C8A—C9A62.8 (2)
C7—C8—C9—N1047.7 (2)C7A—C8A—C9A—N10A50.8 (2)
N5—C5A—N10—C110.2 (3)N5A—C5AB—N10A—C11C1.7 (3)
C6—C5A—N10—C11178.39 (16)C6A—C5AB—N10A—C11C179.40 (15)
N5—C5A—N10—C9176.99 (17)N5A—C5AB—N10A—C9A178.32 (17)
C6—C5A—N10—C94.9 (2)C6A—C5AB—N10A—C9A0.6 (3)
C8—C9—N10—C11164.95 (15)C8A—C9A—N10A—C5AB19.7 (3)
C8—C9—N10—C5A18.1 (2)C8A—C9A—N10A—C11C160.24 (16)
C5A—N10—C11—O1177.88 (16)C5AB—N10A—C11C—O1A177.62 (16)
C9—N10—C11—O10.9 (2)C9A—N10A—C11C—O1A2.4 (2)
C5A—N10—C11—C11A2.3 (2)C5AB—N10A—C11C—C11B3.1 (2)
C9—N10—C11—C11A179.31 (14)C9A—N10A—C11C—C11B176.91 (15)
N5—C4A—C11A—C1179.25 (15)C2A—C1A—C11B—C4AB0.7 (2)
C4—C4A—C11A—C10.4 (3)C2A—C1A—C11B—C11C177.54 (15)
N5—C4A—C11A—C110.1 (3)N5A—C4AB—C11B—C1A179.85 (15)
C4—C4A—C11A—C11179.82 (15)C4AA—C4AB—C11B—C1A0.8 (2)
C2—C1—C11A—C4A0.0 (3)N5A—C4AB—C11B—C11C1.6 (2)
C2—C1—C11A—C11179.41 (15)C4AA—C4AB—C11B—C11C177.47 (15)
O1—C11—C11A—C4A178.01 (17)O1A—C11C—C11B—C1A2.5 (3)
N10—C11—C11A—C4A2.2 (2)N10A—C11C—C11B—C1A176.78 (15)
O1—C11—C11A—C12.6 (3)O1A—C11C—C11B—C4AB179.27 (17)
N10—C11—C11A—C1177.22 (15)N10A—C11C—C11B—C4AB1.5 (2)
C2—N'—C12—O'6.6 (3)C2A—N'A—C12A—O'A2.2 (3)
C2—N'—C12—C1'171.41 (15)C2A—N'A—C12A—C1'A175.40 (16)
C2'—C1'—C12—O'171.22 (17)C6'A—C1'A—C12A—O'A26.6 (2)
C6'—C1'—C12—O'4.0 (2)C2'A—C1'A—C12A—O'A154.22 (18)
C2'—C1'—C12—N'6.8 (3)C6'A—C1'A—C12A—N'A151.12 (16)
C6'—C1'—C12—N'177.94 (15)C2'A—C1'A—C12A—N'A28.1 (2)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N—H1A···O1Ai0.92 (2)2.10 (2)3.0011 (18)166.6 (19)
C1—H1···O0.952.192.808 (2)122
C3—H3···O1Ai0.952.473.257 (2)141
NA—HA···O1ii0.87 (2)2.03 (2)2.8861 (18)169.0 (19)
C1A—H1A···O1ii0.952.413.167 (2)136
C3A—H3A···OA0.952.322.920 (2)120
C4AA—H4AA···Oiii0.952.463.405 (2)176
Symmetry codes: (i) x+1, y, z; (ii) x+1, y, z; (iii) x+1, y+1, z.
 

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