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Heterocyclic chalcones are a recently explored subgroup of chalcones that have sparked interest due to their significant antibacterial and antifungal capabilities. Herein, the structure and solubility of two such compounds, (E)-1-(1H-pyrrol-2-yl)-3-(thio­phen-2-yl)prop-2-en-1-one and (E)-3-phenyl-1-(1H-pyrrol-2-yl)prop-2-en-1-one, are assessed. Single crystals of (E)-1-(1H-pyrrol-2-yl)-3-(thio­phen-2-yl)prop-2-en-1-one were grown, allowing structural comparisons between the heterocyclic chalcones and (2E)-1,3-di­phenyl­prop-2-en-1-one, trivially known as trans-chalcone. The two heterocyclic chalcones were found to be less soluble in all solvents tested and to have higher melting points than trans-chalcone, probably due to their stronger intermolecular interactions arising from the functionalized rings. Interestingly, however, it was found that the addition of the thio­phene ring in (E)-1-(1H-pyrrol-2-yl)-3-(thio­phen-2-yl)prop-2-en-1-one increased both the melting point and solubility of the sample compared with (E)-3-phenyl-1-(1H-pyrrol-2-yl)prop-2-en-1-one. This observation may be key for the future crystal engineering of heterocyclic chalcones for pharmaceutical applications.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S2052520619015907/bm5123sup1.cif
Contains datablock I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2052520619015907/bm5123Isup2.hkl
Contains datablock I

cml

Chemical Markup Language (CML) file https://doi.org/10.1107/S2052520619015907/bm5123sup3.cml
Supplementary material

pdf

Portable Document Format (PDF) file https://doi.org/10.1107/S2052520619015907/bm5123sup4.pdf
Additional experimental data tables and figures

CCDC reference: 1952662

Computing details top

Data collection: SAINT V8.38A (?, 2016); cell refinement: SAINT V8.38A (?, 2016); data reduction: SAINT V8.38A (?, 2016); program(s) used to solve structure: Superflip (Palatinus & Chapuis, 2007;Palatinus & van der Lee, 2008; Palatinus et al., 2012); program(s) used to refine structure: SHELXL (Sheldrick, 2015); molecular graphics: Olex2 (Dolomanov et al., 2009); software used to prepare material for publication: Olex2 (Dolomanov et al., 2009).

(E)-1-(1H-pyrrol-2-yl)-3-(thiophen-2-yl)prop-2-en-1-one top
Crystal data top
C11H9NOSDx = 1.402 Mg m3
Mr = 203.25Melting point: 423.42 K
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 15.0288 (5) ÅCell parameters from 5280 reflections
b = 5.3086 (2) Åθ = 2.3–27.5°
c = 24.4440 (8) ŵ = 0.30 mm1
β = 99.133 (2)°T = 100 K
V = 1925.46 (12) Å3Block, pale yellow
Z = 80.53 × 0.28 × 0.26 mm
F(000) = 848
Data collection top
Bruker Apex II kappa CCD area detector
diffractometer
6848 independent reflections
Radiation source: fine-focus sealed tube5578 reflections with I > 2σ(I)
Graphite monochromatorθmax = 27.6°, θmin = 1.4°
φ and ω scansh = 1919
Absorption correction: multi-scan
TWINABS-2012/1 (Bruker,2012) was used for absorption correction.
Final HKLF 4 output contains 30296 reflections, Rint = 0.0380 (11517 with I > 3sig(I), Rint = 0.0251)
k = 06
Tmin = 0.606, Tmax = 0.746l = 031
6848 measured reflections
Refinement top
Refinement on F2Primary atom site location: iterative
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: mixed
wR(F2) = 0.092H atoms treated by a mixture of independent and constrained refinement
S = 1.03 w = 1/[σ2(Fo2) + (0.0418P)2 + 0.8248P]
where P = (Fo2 + 2Fc2)/3
6848 reflections(Δ/σ)max = 0.001
354 parametersΔρmax = 0.30 e Å3
312 restraintsΔρmin = 0.27 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Refinement. Refined as a 2-component twin.

Hydrogen atoms on nitrogen atoms were found by difference map after all other atoms had been refined. All other hydrogen atoms were placed geometrically and refined using a riding model.

There are two molecules in the asymmetric unit, both contain a disordered thiophene group which has been modelled in two positions. The refined occupancy ratio is 0.922:0.078 (2) for molecule 1 and 0.884:0.116 (2) for molecule 2. Equivalent atom distances in the major and minor components (e.g. C1-C2 and C1A-C2A) have been restrained to be the same. The ADPs of atoms in close proximity have also been restrained to be the same.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/UeqOcc. (<1)
O10.95761 (9)0.9004 (2)0.56582 (5)0.0207 (3)
N10.91661 (11)0.7276 (3)0.45592 (7)0.0161 (3)
H10.9515 (15)0.849 (4)0.4573 (9)0.019 (6)*
C10.91434 (12)0.7025 (3)0.55598 (8)0.0155 (4)
C20.88697 (13)0.5508 (4)0.60112 (8)0.0172 (4)
H20.8549580.3978490.5926160.021*
C30.90667 (12)0.6262 (3)0.65373 (8)0.0146 (4)
H3A0.9369420.7832930.6597070.018*0.922 (2)
H3B0.9335030.7867320.6618270.018*0.078 (2)
C40.88892 (12)0.6088 (3)0.50027 (8)0.0145 (4)
C50.88373 (13)0.6041 (4)0.40891 (8)0.0183 (4)
H50.8940150.6481010.3727670.022*
C60.83261 (13)0.4029 (4)0.42187 (8)0.0188 (4)
H60.8009180.2859690.3965190.023*
C70.83641 (13)0.4041 (3)0.47953 (8)0.0166 (4)
H70.8082510.2866270.5005930.020*
S10.82556 (7)0.22169 (12)0.69949 (3)0.01463 (18)0.922 (2)
C80.8876 (5)0.4982 (7)0.70271 (10)0.0123 (6)0.922 (2)
C90.83662 (19)0.2044 (5)0.77058 (9)0.0138 (5)0.922 (2)
H90.8114780.0745040.7900780.017*0.922 (2)
C100.8861 (3)0.4011 (5)0.79548 (13)0.0150 (5)0.922 (2)
H100.8995750.4244880.8344540.018*0.922 (2)
C110.9146 (4)0.5639 (11)0.7567 (2)0.0203 (12)0.922 (2)
H110.9500290.7092970.7671800.024*0.922 (2)
S1A0.9259 (13)0.603 (3)0.7625 (7)0.013 (2)0.078 (2)
C8A0.888 (6)0.468 (10)0.6986 (7)0.015 (3)0.078 (2)
C9A0.883 (4)0.350 (7)0.7938 (15)0.015 (3)0.078 (2)
H9A0.8928630.3115850.8322940.018*0.078 (2)
C10A0.833 (3)0.214 (7)0.7528 (12)0.014 (3)0.078 (2)
H10A0.7994920.0736190.7626070.017*0.078 (2)
C11A0.828 (3)0.275 (8)0.6968 (14)0.015 (3)0.078 (2)
H11A0.7918140.2013650.6654860.018*0.078 (2)
O20.53652 (9)1.3919 (3)0.57317 (6)0.0213 (3)
N20.58523 (11)1.2276 (3)0.47241 (7)0.0164 (3)
H2A0.5513 (16)1.355 (5)0.4677 (10)0.029 (7)*
C120.58131 (12)1.1960 (4)0.57221 (8)0.0161 (4)
C130.60668 (13)1.0418 (4)0.62247 (8)0.0171 (4)
H130.6378940.8876420.6200310.021*
C140.58661 (12)1.1150 (3)0.67132 (8)0.0151 (4)
H140.5538091.2678430.6715370.018*0.884 (2)
H14A0.5555781.2691390.6741660.018*0.116 (2)
C150.61125 (12)1.1086 (3)0.52230 (8)0.0153 (4)
C160.62154 (13)1.1074 (4)0.43253 (8)0.0183 (4)
H160.6131021.1525230.3944430.022*
C170.67293 (13)0.9083 (4)0.45617 (8)0.0191 (4)
H170.7065580.7937150.4376650.023*
C180.66604 (13)0.9073 (3)0.51264 (8)0.0180 (4)
H180.6937400.7904390.5394940.022*
S20.67147 (9)0.7104 (2)0.73047 (4)0.01612 (19)0.884 (2)
C190.6092 (7)0.9873 (10)0.72389 (12)0.0127 (6)0.884 (2)
C200.6686 (2)0.6955 (6)0.80047 (10)0.0151 (6)0.884 (2)
H200.6963130.5662200.8241010.018*0.884 (2)
C210.6215 (3)0.8922 (7)0.81804 (16)0.0168 (6)0.884 (2)
H210.6125350.9161920.8552830.020*0.884 (2)
C220.5881 (6)1.0544 (14)0.7741 (3)0.0206 (14)0.884 (2)
H220.5534361.1998090.7790040.025*0.884 (2)
S2A0.5804 (12)1.093 (3)0.7785 (6)0.0158 (17)0.116 (2)
C19A0.612 (5)0.960 (9)0.7198 (9)0.014 (3)0.116 (2)
C20A0.631 (3)0.844 (6)0.8166 (12)0.017 (3)0.116 (2)
H20A0.6324610.8216590.8552780.020*0.116 (2)
C21A0.669 (2)0.684 (6)0.7830 (9)0.017 (3)0.116 (2)
H21A0.6984370.5344730.7973470.020*0.116 (2)
C22A0.662 (3)0.747 (6)0.7266 (12)0.016 (3)0.116 (2)
H22A0.6869460.6578470.6990050.019*0.116 (2)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0239 (8)0.0203 (7)0.0178 (7)0.0079 (6)0.0030 (6)0.0010 (6)
N10.0178 (8)0.0156 (8)0.0152 (8)0.0031 (7)0.0037 (6)0.0013 (6)
C10.0128 (9)0.0162 (9)0.0173 (9)0.0004 (7)0.0020 (7)0.0020 (8)
C20.0182 (10)0.0166 (9)0.0168 (9)0.0025 (7)0.0024 (8)0.0016 (8)
C30.0125 (9)0.0134 (8)0.0181 (10)0.0007 (7)0.0026 (7)0.0017 (7)
C40.0148 (9)0.0145 (9)0.0144 (9)0.0025 (7)0.0031 (7)0.0029 (7)
C50.0220 (10)0.0196 (10)0.0135 (9)0.0016 (8)0.0033 (8)0.0008 (8)
C60.0198 (10)0.0189 (10)0.0177 (10)0.0012 (8)0.0031 (8)0.0039 (8)
C70.0180 (10)0.0152 (9)0.0173 (10)0.0001 (7)0.0046 (8)0.0013 (7)
S10.0168 (3)0.0127 (4)0.0142 (3)0.0031 (3)0.0020 (2)0.0003 (2)
C80.0109 (9)0.0095 (14)0.0163 (10)0.0013 (13)0.0019 (10)0.0008 (9)
C90.0162 (10)0.0165 (10)0.0091 (11)0.0002 (8)0.0036 (11)0.0038 (11)
C100.0165 (11)0.0155 (15)0.0132 (10)0.0022 (12)0.0026 (8)0.0009 (10)
C110.018 (2)0.016 (2)0.027 (2)0.0024 (13)0.0021 (14)0.0023 (13)
S1A0.018 (4)0.013 (4)0.010 (3)0.003 (3)0.007 (3)0.007 (3)
C8A0.016 (5)0.015 (5)0.013 (5)0.003 (5)0.003 (5)0.002 (5)
C9A0.018 (5)0.016 (5)0.012 (5)0.000 (5)0.008 (4)0.006 (5)
C10A0.016 (5)0.015 (5)0.011 (5)0.003 (4)0.004 (5)0.002 (5)
C11A0.018 (5)0.016 (5)0.012 (5)0.002 (5)0.007 (5)0.001 (5)
O20.0239 (8)0.0210 (7)0.0189 (7)0.0086 (6)0.0035 (6)0.0030 (6)
N20.0174 (8)0.0157 (8)0.0161 (8)0.0025 (7)0.0023 (7)0.0016 (6)
C120.0141 (9)0.0176 (9)0.0159 (9)0.0011 (7)0.0000 (7)0.0014 (7)
C130.0171 (9)0.0161 (9)0.0176 (10)0.0026 (7)0.0013 (8)0.0024 (8)
C140.0110 (9)0.0151 (9)0.0186 (9)0.0016 (7)0.0005 (7)0.0003 (7)
C150.0144 (9)0.0160 (9)0.0153 (9)0.0011 (7)0.0016 (7)0.0018 (7)
C160.0198 (10)0.0205 (10)0.0146 (9)0.0028 (8)0.0024 (8)0.0002 (8)
C170.0183 (10)0.0198 (10)0.0192 (10)0.0007 (8)0.0034 (8)0.0026 (8)
C180.0167 (9)0.0161 (9)0.0204 (10)0.0011 (7)0.0006 (8)0.0020 (8)
S20.0178 (4)0.0134 (4)0.0173 (3)0.0031 (3)0.0033 (3)0.0013 (2)
C190.0110 (12)0.0107 (16)0.0159 (12)0.0007 (13)0.0009 (12)0.0007 (11)
C200.0175 (11)0.0175 (11)0.0101 (13)0.0004 (9)0.0013 (12)0.0036 (13)
C210.0168 (16)0.0185 (17)0.0151 (11)0.0010 (12)0.0028 (9)0.0021 (11)
C220.019 (2)0.016 (2)0.027 (2)0.0016 (16)0.0028 (15)0.0017 (16)
S2A0.021 (3)0.016 (3)0.010 (3)0.001 (3)0.001 (2)0.003 (2)
C19A0.015 (5)0.018 (5)0.011 (4)0.004 (4)0.005 (4)0.002 (4)
C20A0.019 (5)0.018 (5)0.013 (4)0.001 (4)0.000 (4)0.004 (4)
C21A0.018 (4)0.017 (4)0.015 (5)0.002 (4)0.002 (5)0.004 (5)
C22A0.016 (5)0.019 (5)0.012 (5)0.005 (4)0.003 (4)0.001 (4)
Geometric parameters (Å, º) top
N1—H10.83 (2)N2—H2A0.84 (2)
C1—O11.239 (2)C12—O21.241 (2)
C1—C41.443 (3)C12—C151.442 (3)
C2—C11.476 (3)C13—C121.475 (3)
C2—H20.9500C13—H130.9500
C3—C21.335 (3)C14—C131.335 (3)
C3—H3A0.9500C14—H140.9500
C3—H3B0.9500C14—H14A0.9500
C4—N11.374 (2)C15—N21.374 (2)
C4—C71.390 (3)C15—C181.392 (3)
C5—N11.347 (2)C16—N21.351 (2)
C5—H50.9500C16—H160.9500
C6—C51.381 (3)C17—C161.381 (3)
C6—H60.9500C17—H170.9500
C7—C61.402 (3)C18—C171.400 (3)
C7—H70.9500C18—H180.9500
C8—C31.444 (3)C19—C141.445 (3)
C8—S11.734 (3)C19—S21.736 (3)
C9—S11.722 (2)C20—S21.720 (3)
C9—H90.9500C20—H200.9500
C9—C101.368 (3)C20—C211.367 (3)
C10—H100.9500C21—H210.9500
C10—C111.399 (6)C21—C221.406 (7)
C11—C81.363 (6)C22—C191.362 (7)
C11—H110.9500C22—H220.9500
C8A—C31.445 (12)C19A—C141.443 (12)
C8A—S1A1.731 (13)C19A—S2A1.731 (14)
C9A—S1A1.723 (13)C20A—S2A1.722 (13)
C9A—H9A0.9500C20A—H20A0.9500
C9A—C10A1.362 (13)C20A—C21A1.365 (12)
C10A—H10A0.9500C21A—H21A0.9500
C10A—C11A1.397 (14)C21A—C22A1.407 (14)
C11A—C8A1.359 (14)C22A—C19A1.353 (14)
C11A—H11A0.9500C22A—H22A0.9500
C4—N1—H1126.5 (15)C15—N2—H2A124.8 (16)
C5—N1—H1123.9 (15)C16—N2—H2A125.8 (16)
C5—N1—C4109.47 (16)C16—N2—C15109.44 (16)
O1—C1—C2121.16 (17)O2—C12—C13121.24 (17)
O1—C1—C4121.83 (17)O2—C12—C15121.89 (17)
C4—C1—C2117.00 (16)C15—C12—C13116.87 (16)
C1—C2—H2119.6C12—C13—H13119.4
C3—C2—C1120.75 (18)C14—C13—C12121.22 (17)
C3—C2—H2119.6C14—C13—H13119.4
C2—C3—H3A116.0C13—C14—H14116.4
C2—C3—H3B119.4C13—C14—H14A120.0
C2—C3—C8127.94 (19)C13—C14—C19127.2 (2)
C2—C3—C8A121.1 (10)C13—C14—C19A120.1 (8)
C8—C3—H3A116.0C19—C14—H14116.4
C8A—C3—H3B119.4C19A—C14—H14A120.0
N1—C4—C1121.21 (17)N2—C15—C12121.33 (17)
N1—C4—C7107.25 (16)N2—C15—C18107.16 (16)
C7—C4—C1131.54 (17)C18—C15—C12131.51 (17)
N1—C5—H5125.6N2—C16—H16125.6
N1—C5—C6108.84 (17)N2—C16—C17108.83 (17)
C6—C5—H5125.6C17—C16—H16125.6
C5—C6—H6126.5C16—C17—H17126.5
C5—C6—C7106.95 (17)C16—C17—C18106.94 (17)
C7—C6—H6126.5C18—C17—H17126.5
C4—C7—C6107.48 (17)C15—C18—C17107.62 (17)
C4—C7—H7126.3C15—C18—H18126.2
C6—C7—H7126.3C17—C18—H18126.2
C9—S1—C891.96 (12)C20—S2—C1991.87 (15)
C3—C8—S1122.46 (18)C14—C19—S2121.8 (2)
C11—C8—C3127.9 (3)C22—C19—C14128.5 (4)
C11—C8—S1109.6 (3)C22—C19—S2109.7 (3)
S1—C9—H9124.2S2—C20—H20124.0
C10—C9—S1111.5 (2)C21—C20—S2111.9 (3)
C10—C9—H9124.2C21—C20—H20124.0
C9—C10—H10124.1C20—C21—H21124.2
C9—C10—C11111.9 (3)C20—C21—C22111.5 (4)
C11—C10—H10124.1C22—C21—H21124.2
C8—C11—C10115.0 (4)C19—C22—C21115.0 (5)
C8—C11—H11122.5C19—C22—H22122.5
C10—C11—H11122.5C21—C22—H22122.5
C9A—S1A—C8A89.1 (16)C20A—S2A—C19A88.9 (13)
C3—C8A—S1A111.5 (14)C14—C19A—S2A112.2 (13)
C11A—C8A—C3128 (3)C22A—C19A—C14130.3 (19)
C11A—C8A—S1A118 (2)C22A—C19A—S2A117.2 (15)
S1A—C9A—H9A126.6S2A—C20A—H20A125.0
C10A—C9A—S1A107 (3)C21A—C20A—S2A110 (2)
C10A—C9A—H9A126.6C21A—C20A—H20A125.0
C9A—C10A—H10A118.8C20A—C21A—H21A121.0
C9A—C10A—C11A122 (4)C20A—C21A—C22A118 (3)
C11A—C10A—H10A118.8C22A—C21A—H21A121.0
C8A—C11A—C10A102 (3)C19A—C22A—C21A106 (2)
C8A—C11A—H11A128.9C19A—C22A—H22A127.1
C10A—C11A—H11A128.9C21A—C22A—H22A127.1
O1—C1—C4—N14.1 (3)O2—C12—C15—N25.4 (3)
O1—C1—C4—C7175.24 (19)O2—C12—C15—C18175.3 (2)
N1—C4—C7—C60.3 (2)N2—C15—C18—C170.3 (2)
C1—C4—N1—C5179.78 (17)C12—C15—N2—C16179.33 (17)
C1—C4—C7—C6179.10 (19)C12—C15—C18—C17179.8 (2)
C2—C1—C4—N1175.50 (17)C13—C12—C15—N2174.82 (17)
C2—C1—C4—C75.1 (3)C13—C12—C15—C184.5 (3)
C3—C2—C1—O11.4 (3)C14—C13—C12—O23.7 (3)
C3—C2—C1—C4179.01 (18)C14—C13—C12—C15176.07 (18)
C3—C8—S1—C9179.5 (5)C14—C19—S2—C20179.1 (7)
C3—C8A—S1A—C9A178 (6)C14—C19A—S2A—C20A177 (5)
C4—C7—C6—C50.8 (2)C15—C18—C17—C160.7 (2)
C6—C5—N1—C40.8 (2)C17—C16—N2—C150.6 (2)
C7—C4—N1—C50.3 (2)C18—C15—N2—C160.2 (2)
C7—C6—C5—N11.0 (2)C18—C17—C16—N20.8 (2)
S1—C8—C3—C24.9 (7)S2—C19—C14—C131.7 (10)
S1—C9—C10—C110.0 (5)S2—C20—C21—C220.1 (7)
C8—C3—C2—C1177.9 (4)C19—C14—C13—C12178.2 (6)
C9—C10—C11—C80.5 (8)C20—C21—C22—C190.6 (12)
C10—C9—S1—C80.4 (4)C21—C20—S2—C190.5 (5)
C10—C11—C8—C3179.5 (6)C21—C22—C19—C14178.9 (8)
C10—C11—C8—S10.7 (8)C21—C22—C19—S20.9 (12)
C11—C8—C3—C2173.7 (6)C22—C19—C14—C13178.5 (9)
C11—C8—S1—C90.6 (5)C22—C19—S2—C200.8 (8)
S1A—C8A—C3—C2177 (3)S2A—C19A—C14—C13179 (3)
S1A—C9A—C10A—C11A5 (7)S2A—C20A—C21A—C22A1 (5)
C8A—C3—C2—C1174 (5)C19A—C14—C13—C12180 (4)
C9A—C10A—C11A—C8A5 (8)C20A—C21A—C22A—C19A3 (7)
C10A—C9A—S1A—C8A10 (6)C21A—C20A—S2A—C19A1 (5)
C10A—C11A—C8A—C3174 (8)C21A—C22A—C19A—C14177 (7)
C10A—C11A—C8A—S1A13 (8)C21A—C22A—C19A—S2A4 (8)
C11A—C8A—C3—C222 (11)C22A—C19A—C14—C136 (11)
C11A—C8A—S1A—C9A14 (8)C22A—C19A—S2A—C20A3 (7)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.83 (2)2.05 (2)2.841 (2)160 (2)
N2—H2A···O2ii0.84 (2)2.03 (2)2.832 (2)158 (2)
Symmetry codes: (i) x+2, y+2, z+1; (ii) x+1, y+3, z+1.
 

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