Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807048313/bi2237sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807048313/bi2237Isup2.hkl |
CCDC reference: 653957
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.004 Å
- R factor = 0.048
- wR factor = 0.145
- Data-to-parameter ratio = 13.0
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT066_ALERT_1_C Predicted and Reported Transmissions Identical . ?
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 1 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
For related literature, see: Elguero (1984); Fun et al. (1996); Liao et al. (2000); Lu et al. (1996)
A solution of 4-hydrazinylphthalazin-1(2H)-one (10 mmol) in 50 ml toluene was added to a solution of pentane-2,4-dione (10 mmol) in 10 ml toluene. The reaction mixture was refluxed for 1 h with stirring. The resulting pale yellow precipitate was isolated by filtration, washed several times with ethanol and dried in vacuo (yield 90%). Single crystals suitable for X-ray diffraction analysis were obtained by slow evaporation of a methanol solution of the compound.
H atoms were placed geometrically with O—H = 0.85 Å, N—H = 0.86 Å and C—H in the range 0.93–0.96 Å, and refined using a riding model, with Uiso(H) = 1.2 Ueq(C/N) or 1.5Ueq(O/methyl C).
Data collection: SMART (Bruker, 2003); cell refinement: SAINT (Bruker, 2003); data reduction: SAINT (Bruker, 2003); program(s) used to solve structure: SHELXTL (Bruker, 1997); program(s) used to refine structure: SHELXTL (Bruker, 1997); molecular graphics: SHELXTL (Bruker, 1997); software used to prepare material for publication: SHELXTL (Bruker, 1997).
Fig. 1. The molecular structure of the title compound showing displacement ellipsoids at 50% probability for non-H atoms. |
C13H12N4O·H2O | F(000) = 544 |
Mr = 258.28 | Dx = 1.345 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 1490 reflections |
a = 7.6782 (12) Å | θ = 2.3–23.9° |
b = 14.844 (2) Å | µ = 0.10 mm−1 |
c = 11.2565 (16) Å | T = 298 K |
β = 96.348 (2)° | Block, colorless |
V = 1275.1 (3) Å3 | 0.54 × 0.48 × 0.45 mm |
Z = 4 |
Bruker SMART CCD diffractometer | 2243 independent reflections |
Radiation source: fine-focus sealed tube | 1398 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.053 |
ϕ and ω scans | θmax = 25.0°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→9 |
Tmin = 0.951, Tmax = 0.959 | k = −17→17 |
6118 measured reflections | l = −13→5 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.048 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.145 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0598P)2 + 0.3268P] where P = (Fo2 + 2Fc2)/3 |
2243 reflections | (Δ/σ)max < 0.001 |
172 parameters | Δρmax = 0.18 e Å−3 |
0 restraints | Δρmin = −0.23 e Å−3 |
C13H12N4O·H2O | V = 1275.1 (3) Å3 |
Mr = 258.28 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 7.6782 (12) Å | µ = 0.10 mm−1 |
b = 14.844 (2) Å | T = 298 K |
c = 11.2565 (16) Å | 0.54 × 0.48 × 0.45 mm |
β = 96.348 (2)° |
Bruker SMART CCD diffractometer | 2243 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1398 reflections with I > 2σ(I) |
Tmin = 0.951, Tmax = 0.959 | Rint = 0.053 |
6118 measured reflections |
R[F2 > 2σ(F2)] = 0.048 | 0 restraints |
wR(F2) = 0.145 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.18 e Å−3 |
2243 reflections | Δρmin = −0.23 e Å−3 |
172 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 1.0662 (3) | 0.86029 (14) | 0.20505 (18) | 0.0420 (5) | |
N2 | 1.0820 (3) | 0.89129 (14) | 0.31927 (18) | 0.0448 (6) | |
H2 | 1.1197 | 0.9455 | 0.3300 | 0.054* | |
N3 | 0.9777 (3) | 0.75338 (13) | 0.06555 (17) | 0.0379 (5) | |
N4 | 1.0434 (3) | 0.67089 (13) | 0.03713 (18) | 0.0431 (6) | |
O1 | 1.0755 (2) | 0.88111 (14) | 0.51770 (16) | 0.0598 (6) | |
O2 | 0.8248 (3) | 0.92707 (12) | 0.66750 (16) | 0.0593 (6) | |
H1 | 0.9076 | 0.9137 | 0.6264 | 0.071* | |
H3 | 0.7326 | 0.9014 | 0.6351 | 0.071* | |
C1 | 0.9959 (3) | 0.78127 (16) | 0.1866 (2) | 0.0353 (6) | |
C2 | 0.9365 (3) | 0.72550 (16) | 0.2784 (2) | 0.0370 (6) | |
C3 | 0.9644 (3) | 0.75784 (16) | 0.3955 (2) | 0.0386 (6) | |
C4 | 1.0448 (3) | 0.84615 (18) | 0.4184 (2) | 0.0424 (7) | |
C5 | 0.8487 (3) | 0.64325 (17) | 0.2566 (2) | 0.0452 (7) | |
H5 | 0.8263 | 0.6214 | 0.1790 | 0.054* | |
C6 | 0.7964 (4) | 0.59558 (19) | 0.3501 (3) | 0.0533 (7) | |
H6 | 0.7379 | 0.5412 | 0.3355 | 0.064* | |
C7 | 0.8287 (4) | 0.6267 (2) | 0.4664 (3) | 0.0567 (8) | |
H7 | 0.7944 | 0.5926 | 0.5291 | 0.068* | |
C8 | 0.9106 (4) | 0.70722 (19) | 0.4892 (2) | 0.0508 (7) | |
H8 | 0.9307 | 0.7284 | 0.5672 | 0.061* | |
C9 | 0.8321 (4) | 0.89067 (17) | −0.0299 (2) | 0.0515 (7) | |
H9A | 0.9225 | 0.9348 | −0.0119 | 0.077* | |
H9B | 0.7535 | 0.8919 | 0.0307 | 0.077* | |
H9C | 0.7685 | 0.9040 | −0.1062 | 0.077* | |
C10 | 0.9124 (3) | 0.79988 (16) | −0.0337 (2) | 0.0387 (6) | |
C11 | 0.9363 (3) | 0.74606 (17) | −0.1278 (2) | 0.0447 (7) | |
H11 | 0.9054 | 0.7591 | −0.2081 | 0.054* | |
C12 | 1.0164 (3) | 0.66706 (17) | −0.0810 (2) | 0.0434 (7) | |
C13 | 1.0716 (4) | 0.5861 (2) | −0.1462 (3) | 0.0654 (9) | |
H13A | 1.1515 | 0.5507 | −0.0936 | 0.098* | |
H13B | 1.1284 | 0.6049 | −0.2138 | 0.098* | |
H13C | 0.9704 | 0.5505 | −0.1730 | 0.098* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0479 (13) | 0.0410 (12) | 0.0370 (12) | −0.0034 (10) | 0.0043 (10) | −0.0081 (10) |
N2 | 0.0517 (13) | 0.0432 (12) | 0.0394 (13) | −0.0055 (10) | 0.0049 (10) | −0.0105 (10) |
N3 | 0.0479 (12) | 0.0353 (11) | 0.0315 (11) | 0.0020 (10) | 0.0090 (9) | −0.0037 (9) |
N4 | 0.0510 (13) | 0.0386 (12) | 0.0408 (13) | 0.0036 (10) | 0.0103 (10) | −0.0051 (10) |
O1 | 0.0635 (13) | 0.0744 (14) | 0.0405 (12) | −0.0013 (10) | 0.0016 (9) | −0.0197 (10) |
O2 | 0.0665 (13) | 0.0588 (13) | 0.0536 (12) | −0.0145 (10) | 0.0105 (10) | −0.0130 (10) |
C1 | 0.0377 (13) | 0.0373 (14) | 0.0314 (13) | 0.0034 (11) | 0.0063 (11) | −0.0043 (11) |
C2 | 0.0346 (13) | 0.0425 (15) | 0.0345 (14) | 0.0047 (11) | 0.0064 (11) | −0.0013 (11) |
C3 | 0.0374 (13) | 0.0453 (15) | 0.0339 (14) | 0.0082 (12) | 0.0072 (11) | −0.0008 (12) |
C4 | 0.0379 (15) | 0.0506 (16) | 0.0388 (16) | 0.0057 (12) | 0.0046 (12) | −0.0094 (13) |
C5 | 0.0485 (15) | 0.0452 (15) | 0.0428 (16) | −0.0031 (13) | 0.0093 (13) | −0.0055 (13) |
C6 | 0.0597 (18) | 0.0487 (16) | 0.0545 (18) | −0.0043 (14) | 0.0200 (15) | 0.0025 (14) |
C7 | 0.0626 (19) | 0.0586 (19) | 0.0528 (19) | 0.0045 (15) | 0.0236 (15) | 0.0122 (15) |
C8 | 0.0565 (17) | 0.0628 (19) | 0.0347 (15) | 0.0107 (15) | 0.0115 (13) | −0.0010 (13) |
C9 | 0.0610 (18) | 0.0439 (16) | 0.0490 (17) | 0.0037 (13) | 0.0029 (14) | 0.0026 (13) |
C10 | 0.0406 (14) | 0.0395 (14) | 0.0361 (14) | −0.0040 (11) | 0.0055 (11) | 0.0030 (12) |
C11 | 0.0539 (16) | 0.0500 (16) | 0.0306 (14) | −0.0057 (13) | 0.0063 (12) | −0.0023 (12) |
C12 | 0.0454 (15) | 0.0447 (16) | 0.0411 (16) | −0.0047 (12) | 0.0097 (13) | −0.0086 (12) |
C13 | 0.073 (2) | 0.063 (2) | 0.062 (2) | 0.0016 (16) | 0.0162 (16) | −0.0248 (16) |
N1—C1 | 1.298 (3) | C5—H5 | 0.930 |
N1—N2 | 1.358 (3) | C6—C7 | 1.385 (4) |
N2—C4 | 1.359 (3) | C6—H6 | 0.930 |
N2—H2 | 0.860 | C7—C8 | 1.362 (4) |
N3—C10 | 1.361 (3) | C7—H7 | 0.930 |
N3—N4 | 1.375 (3) | C8—H8 | 0.930 |
N3—C1 | 1.417 (3) | C9—C10 | 1.484 (3) |
N4—C12 | 1.325 (3) | C9—H9A | 0.960 |
O1—C4 | 1.231 (3) | C9—H9B | 0.960 |
O2—H1 | 0.850 | C9—H9C | 0.960 |
O2—H3 | 0.850 | C10—C11 | 1.356 (3) |
C1—C2 | 1.437 (3) | C11—C12 | 1.400 (4) |
C2—C3 | 1.397 (3) | C11—H11 | 0.930 |
C2—C5 | 1.403 (3) | C12—C13 | 1.494 (4) |
C3—C8 | 1.394 (3) | C13—H13A | 0.960 |
C3—C4 | 1.460 (4) | C13—H13B | 0.960 |
C5—C6 | 1.366 (4) | C13—H13C | 0.960 |
C1—N1—N2 | 116.7 (2) | C8—C7—C6 | 120.1 (3) |
N1—N2—C4 | 127.3 (2) | C8—C7—H7 | 119.9 |
N1—N2—H2 | 116.4 | C6—C7—H7 | 119.9 |
C4—N2—H2 | 116.4 | C7—C8—C3 | 120.0 (3) |
C10—N3—N4 | 111.84 (19) | C7—C8—H8 | 120.0 |
C10—N3—C1 | 129.0 (2) | C3—C8—H8 | 120.0 |
N4—N3—C1 | 118.97 (19) | C10—C9—H9A | 109.5 |
C12—N4—N3 | 104.6 (2) | C10—C9—H9B | 109.5 |
H1—O2—H3 | 107.5 | H9A—C9—H9B | 109.5 |
N1—C1—N3 | 114.4 (2) | C10—C9—H9C | 109.5 |
N1—C1—C2 | 124.4 (2) | H9A—C9—H9C | 109.5 |
N3—C1—C2 | 121.2 (2) | H9B—C9—H9C | 109.5 |
C3—C2—C5 | 119.0 (2) | C11—C10—N3 | 105.8 (2) |
C3—C2—C1 | 116.9 (2) | C11—C10—C9 | 130.5 (2) |
C5—C2—C1 | 124.0 (2) | N3—C10—C9 | 123.6 (2) |
C8—C3—C2 | 120.1 (2) | C10—C11—C12 | 107.0 (2) |
C8—C3—C4 | 120.4 (2) | C10—C11—H11 | 126.5 |
C2—C3—C4 | 119.5 (2) | C12—C11—H11 | 126.5 |
O1—C4—N2 | 120.1 (2) | N4—C12—C11 | 110.8 (2) |
O1—C4—C3 | 125.0 (2) | N4—C12—C13 | 120.4 (2) |
N2—C4—C3 | 114.9 (2) | C11—C12—C13 | 128.8 (2) |
C6—C5—C2 | 119.5 (2) | C12—C13—H13A | 109.5 |
C6—C5—H5 | 120.3 | C12—C13—H13B | 109.5 |
C2—C5—H5 | 120.3 | H13A—C13—H13B | 109.5 |
C5—C6—C7 | 121.3 (3) | C12—C13—H13C | 109.5 |
C5—C6—H6 | 119.4 | H13A—C13—H13C | 109.5 |
C7—C6—H6 | 119.4 | H13B—C13—H13C | 109.5 |
C1—N1—N2—C4 | 5.5 (4) | C2—C3—C4—O1 | −179.9 (2) |
C10—N3—N4—C12 | −0.4 (3) | C8—C3—C4—N2 | −176.2 (2) |
C1—N3—N4—C12 | −176.2 (2) | C2—C3—C4—N2 | 1.8 (3) |
N2—N1—C1—N3 | 178.17 (19) | C3—C2—C5—C6 | −1.6 (4) |
N2—N1—C1—C2 | −0.6 (3) | C1—C2—C5—C6 | −179.5 (2) |
C10—N3—C1—N1 | −47.5 (3) | C2—C5—C6—C7 | −0.2 (4) |
N4—N3—C1—N1 | 127.5 (2) | C5—C6—C7—C8 | 1.5 (4) |
C10—N3—C1—C2 | 131.3 (3) | C6—C7—C8—C3 | −0.9 (4) |
N4—N3—C1—C2 | −53.7 (3) | C2—C3—C8—C7 | −0.9 (4) |
N1—C1—C2—C3 | −3.0 (4) | C4—C3—C8—C7 | 177.1 (2) |
N3—C1—C2—C3 | 178.4 (2) | N4—N3—C10—C11 | 0.1 (3) |
N1—C1—C2—C5 | 174.9 (2) | C1—N3—C10—C11 | 175.4 (2) |
N3—C1—C2—C5 | −3.7 (4) | N4—N3—C10—C9 | 179.6 (2) |
C5—C2—C3—C8 | 2.2 (4) | C1—N3—C10—C9 | −5.1 (4) |
C1—C2—C3—C8 | −179.8 (2) | N3—C10—C11—C12 | 0.2 (3) |
C5—C2—C3—C4 | −175.8 (2) | C9—C10—C11—C12 | −179.2 (3) |
C1—C2—C3—C4 | 2.2 (3) | N3—N4—C12—C11 | 0.5 (3) |
N1—N2—C4—O1 | 175.6 (2) | N3—N4—C12—C13 | 179.9 (2) |
N1—N2—C4—C3 | −6.0 (3) | C10—C11—C12—N4 | −0.5 (3) |
C8—C3—C4—O1 | 2.1 (4) | C10—C11—C12—C13 | −179.8 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1···O1 | 0.85 | 1.93 | 2.781 (3) | 173 |
O2—H3···N4i | 0.85 | 2.03 | 2.870 (3) | 169 |
N2—H2···O2ii | 0.86 | 1.94 | 2.789 (3) | 170 |
Symmetry codes: (i) x−1/2, −y+3/2, z+1/2; (ii) −x+2, −y+2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C13H12N4O·H2O |
Mr | 258.28 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 298 |
a, b, c (Å) | 7.6782 (12), 14.844 (2), 11.2565 (16) |
β (°) | 96.348 (2) |
V (Å3) | 1275.1 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.54 × 0.48 × 0.45 |
Data collection | |
Diffractometer | Bruker SMART CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.951, 0.959 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6118, 2243, 1398 |
Rint | 0.053 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.048, 0.145, 1.02 |
No. of reflections | 2243 |
No. of parameters | 172 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.18, −0.23 |
Computer programs: SMART (Bruker, 2003), SAINT (Bruker, 2003), SHELXTL (Bruker, 1997).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1···O1 | 0.85 | 1.93 | 2.781 (3) | 173.4 |
O2—H3···N4i | 0.85 | 2.03 | 2.870 (3) | 169.1 |
N2—H2···O2ii | 0.86 | 1.94 | 2.789 (3) | 170.4 |
Symmetry codes: (i) x−1/2, −y+3/2, z+1/2; (ii) −x+2, −y+2, −z+1. |
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The chemical and pharmacological properties of pyrazoles have been investigated extensively, owing to their chelating ability with metal ions and their potentially beneficial chemical and biological activities (Elguero, 1984; Fun et al., 1996; Liao et al., 2000; Lu et al., 1996). As part of our studies on the synthesis and characterization of these compounds, we report here the synthesis and crystal structure of the title compound.