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The structures of three isomorphous compounds, namely bis­(2,6-dibromo­pyridinium) tetra­bromidocuprate(II) dihydrate, (C5H4Br2N)2[CuBr4]·2H2O, bis­(2,6-dibromo­pyridinium) tetra­bromidocadmate(II) dihydrate, (C5H4Br2N)2[CdBr4]·2H2O, and bis­(2,6-dibromo­pyridinium) tetra­bromidomercurate(II) dihydrate, (C5H4Br2N)2[HgBr4]·2H2O, show a crystal supra­molecularity represented by M—Br...H—O—H...Br—M inter­molecular inter­actions along with (π)N—H...OH2 hydrogen-bonding inter­actions forming layers connected via ar­yl–aryl face-to-face stacking of cations, leading to a three-dimensional network. The anions have significantly distorted tetra­hedral geometry and crystallographic C2 symmetry. The stability of this crystal lattice is evidenced by the crystallization of a whole series of isomorphous compounds.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S010827010903772X/bg3107sup1.cif
Contains datablocks I, II, III, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S010827010903772X/bg3107Isup2.hkl
Contains datablock I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S010827010903772X/bg3107IIsup3.hkl
Contains datablock II

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S010827010903772X/bg3107IIIsup4.hkl
Contains datablock III

CCDC references: 721360; 721361; 721362

Comment top

Non-covalent interactions play an important role in the organization of structural units in both natural and artificial systems (Desiraju, 1997). The consequences of such interactions may affect the properties of many materials found and utilized in areas such as biology (Hunter, 1994; Desiraju & Steiner, 1999), crystal engineering (Allen et al., 1997; Dolling et al., 2001) and materials science (Panunto et al., 1987; Robinson et al., 2000). The interactions governing the crystal organization are expected to affect the packing and the specific properties of solids.

Organic–inorganic hybrid compounds are of great interest ro researchers because of their special magnetic (Cui et al., 2000), electronic (Lacroix et al., 1994) and optoelectronic properties (Chakravarthy & Guloy, 1997). The influence of the features of the organic cations on the packing interactions that govern the crystal organization is expected to affect the packing and the specific properties of solids. On the other hand, the results of a series of structure analyses and theoretical calculations (Awwadi et al., 2007, and references therein) show the significance of linear C—Br···Br synthons in influencing the structures of crystalline materials, suggesting their use as potential building blocks in crystal engineering via supramolecular synthesis. This inspired our interest in the role of the C—Br···Br—M synthon in the control of the packing of different metal halide anions such as MBr42− in crystalline lattices. In continuation of our work (Luque et al., 2001; Haddad et al., 2006; Al-Far & Ali, 2007a,b; Ali & Al-Far, 2007) on complexes containing cationic pyridine derivatives with bromo-metal anions, herein we describe the crystallization of three isomorphous compounds containing the 2,6-dibromopyridinium cation (denoted 2,6-dbpH), namely bis(2,6-dibromopyridinium) tetrabromidocuprate(II) dihydrate, (I), bis(2,6-dibromopyridinium) tetrabromidocadmate(II) dihydrate, (II), and bis(2,6-dibromopyridinium) tetrabromidomercurate(II) dihydrate, (III), along with their crystal packing and crystal supramolecularity analysis. Comparison of packing forces as related to metal halide distortions, [MBr4]2− (M = CuII, CdII and HgII), with different electronic configurations, is of interest to us. Attempts to make other isomorphous salts of the above failed. The reaction of two equivalents of 2,6-dibromopyridine with one equivalent of the corresponding MII salt in the presence of excess aqueous HBr gave compounds (I), (II) and (III) in 90%, 84% and 82% yield, respectively. The introduction of bromo groups at the 2- and 6- positions increases the basicity at the ring N atom (Al-Far & Ali, 2007a). Therefore, the resulting protonated 2,6-dibromopyridine was expected to create many important centres of interaction with the bromo-metal anions, e.g. N—H···Br, (π)C—H···Br and possibly aryl···aryl stacking.

The title compounds are isomorphous and crystallize in the orthorhombic space group Pccn. The asymmetric unit consists of one cation, one half anion, which lies across a crystallographic C2 axis, and one water molecule (Fig. 1). The anions all have a significantly distorted tetrahedral geometry. The unique M—Br distances are 2.3770 (8) and 2.3797 (8), 2.5803 (5) and 2.5947 (5), and 2.5928 (7) and 2.6215 (7) Å for (I), (II) and (III), respectively. The Br—Cu—Br angles are in the ranges 99.24 (2)–128.09 (2), 102.90 (3)–117.970 (16) and 102.03 (3)–118.19 (2)°, [for (I), (II) and (III)?], respectively. These distances and angles are in accordance with previously reported values for corresponding [MBr4]2−-containing complexes (Coffey et al., 2000; Al-Far & Ali, 2008; Ali et al., 2006). The bond distances and angles in the planar cations in each structure are in the normal range (Allen et al., 1987).

The MBr42– anions and water molecules, that act as bridging units between the anions, form cooperative infinite chains parallel to the crystallographic c axis (Fig. 2). The anions···water chains are held up through M—Br···H—O—H···Br—M intermolecular interactions (Fig. 2, Tables 1, 2 and 3). These chains are further connected to the cations, leading to 'ribbons' (Fig. 2), the connecting unit also being H2O molecules via short (π)N—H···OH2 intermolecular hydrogen bonds. Within the ribbons, Br···Br halogen bonding plays a significant and complementary role in bringing all these interacting moieties together (Fig. 2). This type of interaction results from C—Br···Br—M contacts in which the Br···Br distances (Table 4) are in the range 3.3928 (7)–3.5744 (9) Å which is significantly less than the sum of the van der Waals radii (3.7 Å). It is worth mentioning that halide···halide interactions of the type M—Br···Br—M are absent since the shortest contact in the series [4.3394 (10) Å in (III)] is much larger than the sum of the commonly accepted van der Waals radii.

The discussed ribbons, in turn, interact with neighbouring ones via aryl···aryl face-to-face interactions (π···π stacking) between almost parallel oppositely oriented pyridinium cations, giving rise to layers parallel to the ac plane (Fig. 3a). The distances between the centroids (Cg) of adjacent rings are 3.53 (3), 3.601 (3) and 3.59 (8) Å for Cg (x, y, z)···Cg (1/2 − x, 1/2 − y, z) in (I), (II) and (III), respectively. The angles between the centroid ···centroid line and the perpendicular distance line between planes are calculated to be 2.3, 7.7 and 7.6° in (I), (II) and (III), respectively.

Intermolecular interactions result in two distinguishable regions in the lattice (Fig.3b). One is hydrophobic, which represents the cation layers that interact via offset face-to-face π···π stacking interactions. The other is the hydrophilic region, which represents the zone where C—Br···Br—M, H—O—H···Br—M and N—H···OH2 interactions are assembled.

Experimental top

All compounds were synthesized by dissolving 2,6-dibromopyridine (2 mmol) in 95% EtOH (10 ml, with warming) and an additional 2 ml of HBr (60%). The solution was added slowly with constant stirring to a warm solution of MII salts, CuBr2,CdBr2 and HgCl2 (1 mmol), dissolved in EtOH (10 ml). The resulting mixture was refluxed for 2 h, cooled undisturbed at room temperature and allowed to evaporate slowly until crystals appeared (generally in a few days). The products were as follows: (2,6-dbpH)2[CuBr4]·2H2O, (I), brown crystals, yield 90%; (2,6-dbpH)2[CdBr4]·2H2O, (II), colourless parallelepiped crystals, yield 84%; (2,6-dbpH)2[HgBr4]·2H2O,(III), colourless crystals, yield 82%.

Refinement top

H atoms were positioned geometrically, with NH = 0.86 Å and CH = 0.93 Å, and constrained to ride on their parent atoms, with Uiso(H) = 1.2[U?]eq(C, N). The water H atoms were located first in a difference Fourier map, then refined with restraints [O—H: 0.88 (1) Å] and finally allowed to ride. There is some disorder in the water molecules in all three structures, reflected in the thermal ellipsoids for the water O atoms being quite elongated in a direction perpendicular to the molecular plane, particularly in (I). However, refinement of the water O atoms over several locations with partial occupancy did not improve the picture for what [and?] a single site model with a large displacement factor was preferred.

Computing details top

For all compounds, data collection: SMART (Bruker, 2001); cell refinement: SAINTPlus (Bruker, 2001); data reduction: SAINTPlus (Bruker, 2001); program(s) used to solve structure: XS, SHELXTL (Sheldrick, 2008); program(s) used to refine structure: XL, SHELXTL (Sheldrick, 2008); molecular graphics: XP, SHELXTL (Sheldrick, 2008); software used to prepare material for publication: XCIF, SHELXTL (Sheldrick, 2008).

Figures top
[Figure 1] Fig. 1. The molecular structure of (I), with the atom-labelling scheme. Thermal ellipsoids are drawn at the 50% probability level. The same view and atom-numbering scheme were applied to the other compounds. Symmetry code: (i) 3/2 − x, 1/2 − y, z.
[Figure 2] Fig. 2. A packing view of (I), projected down b, showing the ribbons parallel to c resulting from the hydrogen-bonding interactions (dotted lines) within the chains of anions and water molecules (in black) and with the cations (in grey). The Br···Br interactions between anions and cations are also shown by dashed lines.
[Figure 3] Fig. 3. (a) The overall packing diagram of (I), showing a layered arrangement of cations and anions (cations in grey). (b) Two layers are shown, where the cations from each are further connected to each other parallel to the a axis via an aryl···aryl face-to-face motif (π···π stacking) (viewed down the crystallographic c axis). One layer is shown in black and the other in grey. Intermolecular interactions are shown as dotted solid lines.
(I) bis(2,6-dibromopyridinium) tetrabromidocuprate(II) dihydrate top
Crystal data top
(C5H4Br2N)2[CuBr4]·2H2OF(000) = 1644
Mr = 894.97Dx = 2.729 Mg m3
Orthorhombic, PccnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ab 2acCell parameters from 4142 reflections
a = 10.2861 (7) Åθ = 2.5–26.9°
b = 13.4443 (9) ŵ = 15.68 mm1
c = 15.7523 (11) ÅT = 296 K
V = 2178.4 (3) Å3Fragment, brown
Z = 40.22 × 0.16 × 0.12 mm
Data collection top
Bruker/Siemens SMART APEX
diffractometer
1921 independent reflections
Radiation source: fine-focus sealed tube1426 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.067
Detector resolution: 8.3 pixels mm-1θmax = 25.0°, θmin = 2.6°
ω scansh = 1212
Absorption correction: multi-scan
(SADABS; Bruker, 2001)
k = 1515
Tmin = 0.130, Tmax = 0.255l = 1818
19097 measured reflections
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.033H-atom parameters constrained
wR(F2) = 0.088 w = 1/[σ2(Fo2) + (0.0342P)2 + 3.8947P]
where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
1921 reflectionsΔρmax = 1.32 e Å3
106 parametersΔρmin = 0.49 e Å3
0 restraintsExtinction correction: SHELXL, Fc^*^=kFc[1+0.001xFc^2^λ^3^/sin(2θ)]^-1/4^
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.00064 (8)
Crystal data top
(C5H4Br2N)2[CuBr4]·2H2OV = 2178.4 (3) Å3
Mr = 894.97Z = 4
Orthorhombic, PccnMo Kα radiation
a = 10.2861 (7) ŵ = 15.68 mm1
b = 13.4443 (9) ÅT = 296 K
c = 15.7523 (11) Å0.22 × 0.16 × 0.12 mm
Data collection top
Bruker/Siemens SMART APEX
diffractometer
1921 independent reflections
Absorption correction: multi-scan
(SADABS; Bruker, 2001)
1426 reflections with I > 2σ(I)
Tmin = 0.130, Tmax = 0.255Rint = 0.067
19097 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0330 restraints
wR(F2) = 0.088H-atom parameters constrained
S = 1.03Δρmax = 1.32 e Å3
1921 reflectionsΔρmin = 0.49 e Å3
106 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.3876 (4)0.1195 (3)0.1609 (3)0.0339 (11)
H10.47120.12050.16030.041*
Br10.64522 (6)0.36123 (5)0.31699 (4)0.0454 (2)
Cu10.75000.25000.41253 (6)0.0347 (3)
O10.6405 (4)0.1167 (5)0.1624 (3)0.0748 (18)
H1'0.69560.13930.20090.112*
H2'0.67960.08360.12100.112*
C20.3226 (6)0.1206 (4)0.0875 (4)0.0347 (13)
Br20.84739 (6)0.36789 (5)0.50528 (4)0.0487 (2)
C30.1898 (6)0.1195 (4)0.0853 (4)0.0431 (15)
H30.14570.11870.03380.052*
Br30.42358 (7)0.12737 (5)0.01139 (4)0.0525 (2)
C40.1206 (7)0.1196 (4)0.1632 (4)0.0478 (16)
H40.03020.12190.16430.057*
Br40.42840 (7)0.11425 (5)0.33258 (4)0.0520 (2)
C50.1922 (6)0.1161 (4)0.2373 (4)0.0431 (15)
H50.14960.11320.28940.052*
C60.3256 (6)0.1169 (4)0.2349 (4)0.0390 (14)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.031 (2)0.034 (3)0.036 (3)0.0022 (19)0.001 (2)0.002 (2)
Br10.0400 (4)0.0507 (4)0.0455 (4)0.0069 (3)0.0023 (3)0.0129 (3)
Cu10.0364 (5)0.0396 (5)0.0280 (5)0.0025 (4)0.0000.000
O10.026 (2)0.168 (6)0.030 (3)0.007 (3)0.0011 (19)0.006 (3)
C20.040 (3)0.029 (3)0.035 (3)0.004 (3)0.001 (3)0.000 (2)
Br20.0420 (4)0.0609 (4)0.0433 (4)0.0062 (3)0.0016 (3)0.0151 (3)
C30.036 (3)0.046 (4)0.047 (4)0.002 (3)0.008 (3)0.003 (3)
Br30.0519 (4)0.0710 (5)0.0346 (4)0.0048 (3)0.0024 (3)0.0034 (3)
C40.046 (4)0.041 (4)0.056 (5)0.003 (3)0.013 (3)0.003 (3)
Br40.0515 (4)0.0713 (5)0.0332 (4)0.0048 (3)0.0035 (3)0.0001 (3)
C50.040 (3)0.051 (4)0.039 (4)0.003 (3)0.012 (3)0.001 (3)
C60.042 (4)0.035 (3)0.040 (4)0.004 (3)0.002 (3)0.003 (3)
Geometric parameters (Å, º) top
N1—C61.329 (7)C2—Br31.875 (6)
N1—C21.336 (7)C3—C41.419 (9)
N1—H10.8600C3—H30.9300
Cu1—Br12.3797 (8)C4—C51.382 (8)
Cu1—Br22.3770 (8)C4—H40.9300
O1—H1'0.8837Br4—C61.867 (6)
O1—H2'0.8866C5—C61.372 (8)
C2—C31.366 (9)C5—H50.9300
C6—N1—C2121.2 (5)C2—C3—C4118.7 (6)
C6—N1—H1119.4C2—C3—H3120.7
C2—N1—H1119.4C4—C3—H3120.7
Br2—Cu1—Br2i104.15 (5)C5—C4—C3117.6 (6)
Br2—Cu1—Br1i128.09 (2)C5—C4—H4121.2
Br2i—Cu1—Br1i99.24 (2)C3—C4—H4121.2
Br2—Cu1—Br199.24 (2)C6—C5—C4120.6 (6)
Br2i—Cu1—Br1128.09 (2)C6—C5—H5119.7
Br1i—Cu1—Br1101.54 (5)C4—C5—H5119.7
H1'—O1—H2'112.8N1—C6—C5120.3 (6)
N1—C2—C3121.5 (6)N1—C6—Br4116.8 (4)
N1—C2—Br3116.3 (4)C5—C6—Br4122.9 (5)
C3—C2—Br3122.2 (5)
C6—N1—C2—C30.3 (8)C3—C4—C5—C62.7 (9)
C6—N1—C2—Br3178.6 (4)C2—N1—C6—C50.6 (8)
N1—C2—C3—C41.5 (9)C2—N1—C6—Br4179.4 (4)
Br3—C2—C3—C4176.7 (4)C4—C5—C6—N11.0 (9)
C2—C3—C4—C53.0 (8)C4—C5—C6—Br4179.1 (4)
Symmetry code: (i) x+3/2, y+1/2, z.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O10.861.742.602 (6)177
O1—H1···Br1i0.882.453.298 (4)160
O1—H2···Br2ii0.892.593.271 (4)134
C4—H4···Br1iii0.933.023.662 (7)128
C5—H5···Br1iii0.933.083.703 (6)126
Symmetry codes: (i) x+3/2, y+1/2, z; (ii) x, y+1/2, z1/2; (iii) x+1/2, y+1/2, z.
(II) bis(2,6-dibromopyridinium) tetrabromidocadmate(II) dihydrate top
Crystal data top
(C5H4Br2N)2[CdBr4]·2H2OF(000) = 1720
Mr = 943.83Dx = 2.788 Mg m3
Orthorhombic, PccnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ab 2acCell parameters from 5378 reflections
a = 10.6168 (7) Åθ = 2.4–28.5°
b = 13.5358 (9) ŵ = 15.19 mm1
c = 15.6473 (11) ÅT = 296 K
V = 2248.6 (3) Å3Parallepiped, colourless
Z = 40.16 × 0.16 × 0.04 mm
Data collection top
Bruker/Siemens SMART APEX
diffractometer
2034 independent reflections
Radiation source: fine-focus sealed tube1607 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.068
Detector resolution: 8.3 pixels mm-1θmax = 25.2°, θmin = 2.8°
ω scanh = 1212
Absorption correction: multi-scan
(SADABS; Bruker, 2001)
k = 1616
Tmin = 0.111, Tmax = 0.551l = 1818
20158 measured reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.064H-atom parameters constrained
S = 1.04 w = 1/[s2(Fo2) + (0.0268P)2]
where P = (Fo2 + 2Fc2)/3
2034 reflections(Δ/σ)max = 0.001
105 parametersΔρmax = 0.43 e Å3
0 restraintsΔρmin = 0.39 e Å3
Crystal data top
(C5H4Br2N)2[CdBr4]·2H2OV = 2248.6 (3) Å3
Mr = 943.83Z = 4
Orthorhombic, PccnMo Kα radiation
a = 10.6168 (7) ŵ = 15.19 mm1
b = 13.5358 (9) ÅT = 296 K
c = 15.6473 (11) Å0.16 × 0.16 × 0.04 mm
Data collection top
Bruker/Siemens SMART APEX
diffractometer
2034 independent reflections
Absorption correction: multi-scan
(SADABS; Bruker, 2001)
1607 reflections with I > 2σ(I)
Tmin = 0.111, Tmax = 0.551Rint = 0.068
20158 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0270 restraints
wR(F2) = 0.064H-atom parameters constrained
S = 1.04Δρmax = 0.43 e Å3
2034 reflectionsΔρmin = 0.39 e Å3
105 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.3993 (3)0.1188 (3)0.1583 (2)0.0353 (9)
H10.48030.12030.15790.042*
Br10.61989 (4)0.35982 (4)0.30928 (3)0.04893 (16)
Cd10.75000.25000.41263 (3)0.03762 (15)
O10.6475 (3)0.1097 (3)0.1599 (2)0.0723 (13)
H1'0.69560.13930.20090.108*
H2'0.67960.08360.12100.108*
C20.3362 (4)0.1209 (3)0.0842 (3)0.0390 (11)
Br20.87009 (4)0.37414 (4)0.50762 (3)0.05094 (16)
C30.2070 (4)0.1206 (4)0.0826 (3)0.0488 (12)
H30.16320.12180.03110.059*
Br30.43117 (5)0.12726 (4)0.01609 (3)0.05361 (16)
C40.1440 (4)0.1183 (4)0.1602 (3)0.0503 (13)
H40.05640.11870.16080.060*
Br40.43658 (5)0.10859 (4)0.33169 (3)0.05349 (16)
C50.2083 (4)0.1155 (4)0.2357 (3)0.0467 (12)
H50.16550.11430.28750.056*
C60.3378 (4)0.1145 (3)0.2335 (3)0.0402 (11)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0289 (18)0.039 (2)0.038 (2)0.0010 (15)0.0020 (15)0.0024 (16)
Br10.0422 (3)0.0584 (4)0.0462 (3)0.0062 (2)0.0018 (2)0.0138 (2)
Cd10.0362 (2)0.0434 (3)0.0333 (3)0.0002 (2)0.0000.000
O10.036 (2)0.133 (4)0.049 (2)0.0082 (19)0.0015 (14)0.009 (2)
C20.041 (3)0.031 (3)0.045 (3)0.0023 (18)0.005 (2)0.006 (2)
Br20.0430 (3)0.0635 (4)0.0464 (3)0.0091 (2)0.0004 (2)0.0144 (2)
C30.043 (3)0.051 (3)0.052 (3)0.001 (2)0.011 (2)0.003 (2)
Br30.0529 (3)0.0697 (4)0.0382 (3)0.0056 (2)0.0043 (2)0.0041 (2)
C40.035 (3)0.060 (4)0.056 (3)0.003 (2)0.002 (2)0.003 (3)
Br40.0546 (3)0.0683 (4)0.0377 (3)0.0061 (2)0.0046 (2)0.0006 (2)
C50.038 (2)0.054 (3)0.049 (3)0.000 (2)0.007 (2)0.001 (2)
C60.044 (3)0.039 (3)0.038 (3)0.000 (2)0.001 (2)0.002 (2)
Geometric parameters (Å, º) top
N1—C21.339 (5)C2—C31.372 (6)
N1—C61.345 (5)C2—Br31.868 (4)
N1—H10.8600C3—C41.386 (6)
Br1—Cd12.5947 (5)C3—H30.9300
Cd1—Br22.5803 (5)C4—C51.365 (6)
Cd1—Br2i2.5803 (5)C4—H40.9300
Cd1—Br1i2.5947 (5)Br4—C61.862 (4)
O1—H1'0.9122C5—C61.376 (6)
O1—H2'0.7827C5—H50.9300
C2—N1—C6121.0 (4)C2—C3—C4117.8 (5)
C2—N1—H1119.5C2—C3—H3121.1
C6—N1—H1119.5C4—C3—H3121.1
Br2—Cd1—Br2i109.65 (3)C5—C4—C3121.2 (4)
Br2—Cd1—Br1i117.970 (16)C5—C4—H4119.4
Br2i—Cd1—Br1i104.417 (19)C3—C4—H4119.4
Br2—Cd1—Br1104.417 (19)C4—C5—C6118.6 (4)
Br2i—Cd1—Br1117.970 (16)C4—C5—H5120.7
Br1i—Cd1—Br1102.90 (3)C6—C5—H5120.7
H1'—O1—H2'120.1N1—C6—C5120.4 (4)
N1—C2—C3121.1 (4)N1—C6—Br4116.7 (3)
N1—C2—Br3117.3 (3)C5—C6—Br4122.9 (3)
C3—C2—Br3121.6 (4)
C6—N1—C2—C31.3 (6)C3—C4—C5—C60.3 (8)
C6—N1—C2—Br3179.8 (3)C2—N1—C6—C52.2 (6)
N1—C2—C3—C40.2 (6)C2—N1—C6—Br4178.4 (3)
Br3—C2—C3—C4178.4 (4)C4—C5—C6—N11.7 (6)
C2—C3—C4—C50.6 (8)C4—C5—C6—Br4178.9 (4)
Symmetry code: (i) x+3/2, y+1/2, z.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O10.861.782.639 (4)174
O1—H1···Br1i0.912.593.425 (3)152
O1—H2···Br2ii0.782.753.363 (3)137
C4—H4···Br1iii0.933.003.658 (5)129
C5—H5···Br1iii0.933.073.685 (4)125
Symmetry codes: (i) x+3/2, y+1/2, z; (ii) x, y+1/2, z1/2; (iii) x+1/2, y+1/2, z.
(III) bis(2,6-dibromopyridinium) tetrabromidomercurate(II) dihydrate top
Crystal data top
(C5H4Br2N)2[HgBr4]·2H2OF(000) = 1848
Mr = 1032.01Dx = 3.055 Mg m3
Orthorhombic, PccnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ab 2acCell parameters from 3699 reflections
a = 10.6328 (7) Åθ = 2.4–28.5°
b = 13.5144 (9) ŵ = 21.11 mm1
c = 15.6141 (11) ÅT = 296 K
V = 2243.7 (3) Å3Chunk, colourless
Z = 40.22 × 0.20 × 0.14 mm
Data collection top
Bruker/Siemens SMART APEX
diffractometer
2024 independent reflections
Radiation source: fine-focus sealed tube1535 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.061
Detector resolution: 8.3 pixels mm-1θmax = 25.3°, θmin = 2.4°
ω scansh = 129
Absorption correction: numerical
(SADABS; Bruker, 2001)
k = 1516
Tmin = 0.019, Tmax = 0.051l = 1818
13744 measured reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.068H-atom parameters constrained
S = 1.03 w = 1/[s2(Fo2) + (0.0297P)2]
where P = (Fo2 + 2Fc2)/3
2024 reflections(Δ/σ)max < 0.001
105 parametersΔρmax = 0.94 e Å3
0 restraintsΔρmin = 0.68 e Å3
Crystal data top
(C5H4Br2N)2[HgBr4]·2H2OV = 2243.7 (3) Å3
Mr = 1032.01Z = 4
Orthorhombic, PccnMo Kα radiation
a = 10.6328 (7) ŵ = 21.11 mm1
b = 13.5144 (9) ÅT = 296 K
c = 15.6141 (11) Å0.22 × 0.20 × 0.14 mm
Data collection top
Bruker/Siemens SMART APEX
diffractometer
2024 independent reflections
Absorption correction: numerical
(SADABS; Bruker, 2001)
1535 reflections with I > 2σ(I)
Tmin = 0.019, Tmax = 0.051Rint = 0.061
13744 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0310 restraints
wR(F2) = 0.068H-atom parameters constrained
S = 1.03Δρmax = 0.94 e Å3
2024 reflectionsΔρmin = 0.68 e Å3
105 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.3992 (5)0.1193 (3)0.1580 (3)0.0325 (12)
H10.48000.12060.15740.039*
Br10.61984 (7)0.36068 (5)0.30855 (5)0.0472 (2)
Hg10.75000.25000.41417 (2)0.04000 (13)
O10.6467 (5)0.1124 (5)0.1605 (3)0.0745 (18)
H1'0.69560.13930.20090.112*
H2'0.67960.08360.12100.112*
C20.3365 (6)0.1217 (5)0.0842 (4)0.0387 (16)
Br20.87038 (7)0.37639 (5)0.50844 (4)0.0495 (2)
C30.2084 (6)0.1205 (5)0.0828 (5)0.0444 (17)
H30.16490.12170.03110.053*
Br30.43205 (7)0.12828 (5)0.01581 (4)0.0520 (2)
C40.1448 (7)0.1175 (5)0.1594 (5)0.0510 (19)
H40.05730.11720.15980.061*
Br40.43698 (7)0.10954 (6)0.33229 (4)0.0515 (2)
C50.2098 (6)0.1150 (5)0.2359 (5)0.0455 (17)
H50.16700.11360.28780.055*
C60.3380 (6)0.1146 (5)0.2337 (4)0.0375 (16)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.032 (3)0.033 (3)0.033 (3)0.002 (2)0.002 (2)0.001 (2)
Br10.0459 (4)0.0526 (4)0.0431 (4)0.0068 (3)0.0010 (3)0.0139 (3)
Hg10.0444 (2)0.0421 (2)0.0335 (2)0.00014 (18)0.0000.000
O10.040 (3)0.139 (6)0.044 (3)0.007 (3)0.000 (2)0.001 (3)
C20.046 (4)0.037 (4)0.034 (4)0.008 (3)0.001 (3)0.002 (3)
Br20.0470 (4)0.0585 (5)0.0431 (4)0.0088 (3)0.0006 (3)0.0142 (3)
C30.042 (4)0.048 (4)0.043 (4)0.007 (3)0.009 (3)0.005 (3)
Br30.0569 (4)0.0650 (5)0.0340 (4)0.0051 (4)0.0045 (3)0.0041 (3)
C40.041 (4)0.058 (5)0.055 (5)0.000 (3)0.001 (4)0.005 (4)
Br40.0573 (5)0.0633 (5)0.0338 (4)0.0062 (4)0.0048 (3)0.0008 (3)
C50.048 (4)0.045 (4)0.043 (4)0.003 (3)0.006 (3)0.003 (3)
C60.048 (4)0.034 (4)0.030 (4)0.006 (3)0.006 (3)0.001 (3)
Geometric parameters (Å, º) top
N1—C61.351 (7)C2—C31.363 (10)
N1—C21.331 (7)C2—Br31.865 (6)
N1—H10.8600C3—C41.375 (9)
Br1—Hg12.6215 (7)C3—H30.9300
Hg1—Br22.5928 (7)C4—C51.379 (9)
Hg1—Br2i2.5928 (7)C4—H40.9300
Hg1—Br1i2.6215 (7)Br4—C61.866 (6)
O1—H1'0.8951C5—C61.364 (9)
O1—H2'0.8093C5—H50.9300
C6—N1—C2121.2 (5)C4—C3—C2118.6 (6)
C6—N1—H1119.4C4—C3—H3120.7
C2—N1—H1119.4C2—C3—H3120.7
Br2—Hg1—Br2i110.82 (3)C5—C4—C3120.5 (7)
Br2—Hg1—Br1i118.19 (2)C5—C4—H4119.8
Br2i—Hg1—Br1i104.00 (3)C3—C4—H4119.8
Br2—Hg1—Br1104.00 (3)C4—C5—C6118.7 (6)
Br2i—Hg1—Br1118.19 (2)C4—C5—H5120.7
Br1i—Hg1—Br1102.03 (3)C6—C5—H5120.7
H1'—O1—H2'118.8N1—C6—C5120.1 (6)
N1—C2—C3120.9 (6)N1—C6—Br4116.9 (5)
N1—C2—Br3117.0 (5)C5—C6—Br4123.0 (5)
C3—C2—Br3122.1 (5)
C6—N1—C2—C30.6 (9)C3—C4—C5—C60.6 (11)
C6—N1—C2—Br3179.9 (4)C2—N1—C6—C51.7 (9)
N1—C2—C3—C40.5 (9)C2—N1—C6—Br4179.0 (5)
Br3—C2—C3—C4178.8 (5)C4—C5—C6—N11.7 (9)
C2—C3—C4—C50.5 (10)C4—C5—C6—Br4179.1 (5)
Symmetry code: (i) x+3/2, y+1/2, z.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O10.861.782.634 (7)175
O1—H1···Br1i0.902.583.412 (5)154
O1—H2···Br2ii0.812.743.364 (5)136
C4—H4···Br1iii0.933.013.664 (7)129
C5—H5···Br1iii0.933.093.699 (7)125
Symmetry codes: (i) x+3/2, y+1/2, z; (ii) x, y+1/2, z1/2; (iii) x+1/2, y+1/2, z.

Experimental details

(I)(II)(III)
Crystal data
Chemical formula(C5H4Br2N)2[CuBr4]·2H2O(C5H4Br2N)2[CdBr4]·2H2O(C5H4Br2N)2[HgBr4]·2H2O
Mr894.97943.831032.01
Crystal system, space groupOrthorhombic, PccnOrthorhombic, PccnOrthorhombic, Pccn
Temperature (K)296296296
a, b, c (Å)10.2861 (7), 13.4443 (9), 15.7523 (11)10.6168 (7), 13.5358 (9), 15.6473 (11)10.6328 (7), 13.5144 (9), 15.6141 (11)
V3)2178.4 (3)2248.6 (3)2243.7 (3)
Z444
Radiation typeMo KαMo KαMo Kα
µ (mm1)15.6815.1921.11
Crystal size (mm)0.22 × 0.16 × 0.120.16 × 0.16 × 0.040.22 × 0.20 × 0.14
Data collection
DiffractometerBruker/Siemens SMART APEX
diffractometer
Bruker/Siemens SMART APEX
diffractometer
Bruker/Siemens SMART APEX
diffractometer
Absorption correctionMulti-scan
(SADABS; Bruker, 2001)
Multi-scan
(SADABS; Bruker, 2001)
Numerical
(SADABS; Bruker, 2001)
Tmin, Tmax0.130, 0.2550.111, 0.5510.019, 0.051
No. of measured, independent and
observed [I > 2σ(I)] reflections
19097, 1921, 1426 20158, 2034, 1607 13744, 2024, 1535
Rint0.0670.0680.061
(sin θ/λ)max1)0.5950.6000.600
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.033, 0.088, 1.03 0.027, 0.064, 1.04 0.031, 0.068, 1.03
No. of reflections192120342024
No. of parameters106105105
H-atom treatmentH-atom parameters constrainedH-atom parameters constrainedH-atom parameters constrained
Δρmax, Δρmin (e Å3)1.32, 0.490.43, 0.390.94, 0.68

Computer programs: SMART (Bruker, 2001), SAINTPlus (Bruker, 2001), XS, SHELXTL (Sheldrick, 2008), XL, SHELXTL (Sheldrick, 2008), XP, SHELXTL (Sheldrick, 2008), XCIF, SHELXTL (Sheldrick, 2008).

Hydrogen-bond geometry (Å, º) for (I) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O10.861.742.602 (6)176.9
O1—H1'···Br1i0.882.453.298 (4)159.7
O1—H2'···Br2ii0.892.593.271 (4)133.9
C4—H4···Br1iii0.933.023.662 (7)128.0
C5—H5···Br1iii0.933.083.703 (6)125.7
Symmetry codes: (i) x+3/2, y+1/2, z; (ii) x, y+1/2, z1/2; (iii) x+1/2, y+1/2, z.
Hydrogen-bond geometry (Å, º) for (II) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O10.861.782.639 (4)173.9
O1—H1'···Br1i0.912.593.425 (3)152.2
O1—H2'···Br2ii0.782.753.363 (3)136.8
C4—H4···Br1iii0.933.003.658 (5)129.3
C5—H5···Br1iii0.933.073.685 (4)125.3
Symmetry codes: (i) x+3/2, y+1/2, z; (ii) x, y+1/2, z1/2; (iii) x+1/2, y+1/2, z.
Hydrogen-bond geometry (Å, º) for (III) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O10.861.782.634 (7)174.7
O1—H1'···Br1i0.902.583.412 (5)154.2
O1—H2'···Br2ii0.812.743.364 (5)135.6
C4—H4···Br1iii0.933.013.664 (7)129.1
C5—H5···Br1iii0.933.093.699 (7)124.9
Symmetry codes: (i) x+3/2, y+1/2, z; (ii) x, y+1/2, z1/2; (iii) x+1/2, y+1/2, z.
Comparative distances (Å) and angles (°) for halogen bonding in the isomorphous complexes top
Contacts(I)(II)(III)
Br2···Br4i3.5744 (9)3.4418 (7)3.4346 (9)
Br1···Br3iv3.5396 (9)3.3928 (7)3.3956 (10)
Angles
Br2···Br4i—C172173174
Br1···Br3iv—C174176177
Symmetry codes: (i) −x + 3/2, −y + 1/2, z; (iv) x, 1/2 − y, 1/2 + z.
 

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