Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270103024569/av1154sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270103024569/av1154Isup2.hkl |
CCDC reference: 229101
2,4-Dimethoxy-6-chloro-1,3,5-triazine (I) was prepared according to the procedure of Cronin et al. (1996) and crystallized from a 1:1 mixture of chloroform and n-heptane.
During refinement, H atoms were constrained to ride on their parent atoms. The methyl H atoms are disordered over two sites with equal occupancies.
Data collection: Collect (Nonius, 2000); cell refinement: DENZO–SMN (Otwinowski & Minor 1997); data reduction: DENZO–SMN (Otwinowski & Minor 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997).
C5H6ClN3O2 | Z = 4 |
Mr = 175.58 | F(000) = 360 |
Orthorhomic, Pbcm | Dx = 1.546 Mg m−3 |
Hall symbol: -P 2c 2b | Mo Kα radiation, λ = 0.71073 Å |
a = 7.743 (1) Å | Cell parameters from 1249 reflections |
b = 14.940 (3) Å | θ = 2.6–25.0° |
c = 6.523 (1) Å | µ = 0.46 mm−1 |
α = 90° | T = 293 K |
β = 90° | Plate, colorless |
γ = 90° | 0.32 × 0.20 × 0.12 mm |
V = 754.6 (2) Å3 |
Nonius KappaCCD diffractometer | 493 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.030 |
Graphite monochromator | θmax = 25.0°, θmin = 2.6° |
Detector resolution: 95 pixels mm-1 | h = −9→9 |
ϕ scans | k = −17→17 |
1249 measured reflections | l = −7→7 |
726 independent reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.031 | H-atom parameters constrained |
wR(F2) = 0.075 | w = 1/[σ2(Fo2) + (0.0431P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.89 | (Δ/σ)max < 0.001 |
726 reflections | Δρmax = 0.15 e Å−3 |
70 parameters | Δρmin = −0.14 e Å−3 |
0 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.016 (4) |
C5H6ClN3O2 | γ = 90° |
Mr = 175.58 | V = 754.6 (2) Å3 |
Orthorhomic, Pbcm | Z = 4 |
a = 7.743 (1) Å | Mo Kα radiation |
b = 14.940 (3) Å | µ = 0.46 mm−1 |
c = 6.523 (1) Å | T = 293 K |
α = 90° | 0.32 × 0.20 × 0.12 mm |
β = 90° |
Nonius KappaCCD diffractometer | 493 reflections with I > 2σ(I) |
1249 measured reflections | Rint = 0.030 |
726 independent reflections |
R[F2 > 2σ(F2)] = 0.031 | 0 restraints |
wR(F2) = 0.075 | H-atom parameters constrained |
S = 0.89 | Δρmax = 0.15 e Å−3 |
726 reflections | Δρmin = −0.14 e Å−3 |
70 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cl | 0.32694 (9) | 0.17414 (5) | 0.2500 | 0.0629 (3) | |
O1 | −0.1782 (2) | 0.36094 (12) | 0.2500 | 0.0531 (5) | |
O2 | −0.2652 (2) | 0.06174 (12) | 0.2500 | 0.0524 (5) | |
N1 | 0.0130 (3) | 0.11433 (14) | 0.2500 | 0.0436 (6) | |
N2 | 0.0514 (3) | 0.27225 (15) | 0.2500 | 0.0447 (6) | |
N3 | −0.2325 (3) | 0.21017 (14) | 0.2500 | 0.0432 (6) | |
C1 | 0.1054 (4) | 0.1889 (2) | 0.2500 | 0.0432 (7) | |
C2 | −0.1214 (4) | 0.27744 (18) | 0.2500 | 0.0411 (7) | |
C3 | −0.1551 (4) | 0.13012 (18) | 0.2500 | 0.0409 (6) | |
C4 | −0.3624 (4) | 0.3752 (2) | 0.2500 | 0.0587 (9) | |
H4A | −0.4091 | 0.3580 | 0.3806 | 0.088* | 0.50 |
H4B | −0.4144 | 0.3396 | 0.1440 | 0.088* | 0.50 |
H4C | −0.3863 | 0.4373 | 0.2254 | 0.088* | 0.50 |
C5 | −0.1928 (4) | −0.02792 (18) | 0.2500 | 0.0643 (8) | |
H5A | −0.1483 | −0.0415 | 0.3838 | 0.096* | 0.50 |
H5B | −0.1012 | −0.0313 | 0.1512 | 0.096* | 0.50 |
H5C | −0.2813 | −0.0703 | 0.2150 | 0.096* | 0.50 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl | 0.0359 (4) | 0.0743 (6) | 0.0784 (5) | −0.0003 (4) | 0.000 | 0.000 |
O1 | 0.0521 (13) | 0.0433 (12) | 0.0640 (11) | 0.0020 (10) | 0.000 | 0.000 |
O2 | 0.0404 (11) | 0.0442 (12) | 0.0726 (12) | −0.0039 (9) | 0.000 | 0.000 |
N1 | 0.0367 (14) | 0.0477 (15) | 0.0464 (11) | −0.0003 (12) | 0.000 | 0.000 |
N2 | 0.0424 (16) | 0.0457 (16) | 0.0459 (13) | −0.0022 (11) | 0.000 | 0.000 |
N3 | 0.0413 (14) | 0.0412 (15) | 0.0473 (12) | 0.0005 (11) | 0.000 | 0.000 |
C1 | 0.0395 (16) | 0.056 (2) | 0.0340 (14) | −0.0010 (15) | 0.000 | 0.000 |
C2 | 0.0484 (19) | 0.0398 (18) | 0.0351 (14) | 0.0017 (14) | 0.000 | 0.000 |
C3 | 0.0419 (17) | 0.0464 (17) | 0.0343 (13) | −0.0029 (15) | 0.000 | 0.000 |
C4 | 0.050 (2) | 0.060 (2) | 0.0664 (18) | 0.0109 (16) | 0.000 | 0.000 |
C5 | 0.058 (2) | 0.0400 (19) | 0.095 (2) | 0.0004 (17) | 0.000 | 0.000 |
Cl—C1 | 1.729 (3) | N3—C2 | 1.323 (3) |
O1—C2 | 1.323 (3) | N3—C3 | 1.338 (3) |
O1—C4 | 1.442 (3) | C4—H4A | 0.9600 |
O2—C3 | 1.331 (3) | C4—H4B | 0.9600 |
O2—C5 | 1.452 (3) | C4—H4C | 0.9600 |
N1—C3 | 1.323 (3) | C5—H5A | 0.9600 |
N1—C1 | 1.324 (3) | C5—H5B | 0.9600 |
N2—C1 | 1.314 (3) | C5—H5C | 0.9600 |
N2—C2 | 1.340 (3) | ||
C2—O1—C4 | 117.9 (2) | O2—C3—N3 | 113.5 (2) |
C3—O2—C5 | 117.5 (2) | O1—C4—H4A | 109.5 |
C3—N1—C1 | 112.4 (2) | O1—C4—H4B | 109.5 |
C1—N2—C2 | 111.9 (2) | H4A—C4—H4B | 109.5 |
C2—N3—C3 | 112.8 (2) | O1—C4—H4C | 109.5 |
N2—C1—N1 | 128.7 (3) | H4A—C4—H4C | 109.5 |
N2—C1—Cl | 115.9 (2) | H4B—C4—H4C | 109.5 |
N1—C1—Cl | 115.4 (2) | O2—C5—H5A | 109.5 |
N3—C2—O1 | 120.0 (2) | O2—C5—H5B | 109.5 |
N3—C2—N2 | 127.2 (2) | H5A—C5—H5B | 109.5 |
O1—C2—N2 | 112.7 (2) | O2—C5—H5C | 109.5 |
N1—C3—O2 | 119.6 (2) | H5A—C5—H5C | 109.5 |
N1—C3—N3 | 126.9 (2) | H5B—C5—H5C | 109.5 |
C2—N2—C1—N1 | 0.0 | C1—N2—C2—N3 | 0.0 |
C2—N2—C1—Cl | 180.0 | C1—N2—C2—O1 | 180.0 |
C3—N1—C1—N2 | 0.0 | C1—N1—C3—O2 | 180.0 |
C3—N1—C1—Cl | 180.0 | C1—N1—C3—N3 | 0.0 |
C3—N3—C2—O1 | 180.0 | C5—O2—C3—N1 | 0.0 |
C3—N3—C2—N2 | 0.0 | C5—O2—C3—N3 | 180.0 |
C4—O1—C2—N3 | 0.0 | C2—N3—C3—N1 | 0.0 |
C4—O1—C2—N2 | 180.0 | C2—N3—C3—O2 | 180.0 |
Experimental details
Crystal data | |
Chemical formula | C5H6ClN3O2 |
Mr | 175.58 |
Crystal system, space group | Orthorhomic, Pbcm |
Temperature (K) | 293 |
a, b, c (Å) | 7.743 (1), 14.940 (3), 6.523 (1) |
α, β, γ (°) | 90, 90, 90 |
V (Å3) | 754.6 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.46 |
Crystal size (mm) | 0.32 × 0.20 × 0.12 |
Data collection | |
Diffractometer | Nonius KappaCCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 1249, 726, 493 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.031, 0.075, 0.89 |
No. of reflections | 726 |
No. of parameters | 70 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.15, −0.14 |
Computer programs: Collect (Nonius, 2000), DENZO–SMN (Otwinowski & Minor 1997), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 for Windows (Farrugia, 1997).
2-Chloro-4,6-dimethoxy-1,3,5-triazine, (I), has been examined for its ability to undergo methyl rearrangement in the solid or liquid-state (Kaftory & Handelsman-Benory, 1994; Handelsman-Benory at al., 2000; Greenberg at al. 2001; Kaftory at al., 2001; Kaftory, 2002). Therefore, we have investigated the structure and thermal behavior of 2,4-dimethoxy-6-chloro-1,3,5-triazine. 2,4-Dimethoxy-6-chloro-1,3,5-triazine crystallizes in the orthorhombic crystal system, in space group Pbcm (Fig. 1). Based on their work on s-triazine derivatives, Glowka & Iwanicka (1989a, 1989b) concluded that the endocyclic bond angles at all N atoms are less than 120°, while those at the C atoms are larger than 120°, irrespective of their hybridization. The molecular geometry of (I) has the same characteristics; the endocyclic bond angles at the N atoms lie in the range 126.9 (2)–128.7 (3)° and those at the C atoms lie in the range 111.9 (2)–112.8 (2)°. The steric effects are best observed by the differences between outer-ring bond angles at the C atoms. Those bond angles at the side of the methyl group are larger [119.6 (2) and 120.0 (2)°] than the other outer-ring bond angles [113.5 (2) and 112.7 (2)°]. Since the substituent on atom C1 is symmetric with respect to atoms N1 and N2 the outer bond angles at atom C1 are practically equal [115.4 (2) and 115.9 (2)°].
The molecules lie on a crystallographic mirror plane. Succesive layers along the c axis are shifted by 1.720 (3) Å relative to one another, parallel to the b axis. As a result, the overlap between two molecules (shown in Fig. 2) is such that parallel columns of Cl atoms are formed, the interatomic distance between the Cl atoms of two neighboring columns being 3.972 (3) Å. The molecules within a layer are arranged in rows along the b axis (Fig. 1), so that a methyl group of one molecule is close [3.180 (3) Å] to an N atom of the second molecule in the same row. This short contact and the O—C···N angle of 177.5 (2)° are the ideal geometry that is expected for methyl rearrangement to take place in the solid state, as described in the references mentioned above. Similar geometry was found in 2-(p-trideuteromethoxyphenyl)-5-trideuteromethoxy-1,3,4-oxadiazole that undergoes methyl rearrangement in the solid state [Dessolin et al. (1992)] where the distance between the methyl C atom and the N atom is 2.992 Å and the O—C···N bond angle is 164.9°. However, the DSC thermograph of I (Fig. 3) indicates that in this compound the methyl rearrangement does not take place in the solid state. The first endothermic peak at 354 K with ΔH = 17.5 kJ mol−1 is attributed to the melting of the compound. The ripples at higher temperature are the result of spillage of the melt, and the exothermic peak at 512 K is assigned to a methyl rearrangement in the liquid state. The melting temperature of (I) is lower (354 K) than the expected temperature of topochemically assisted methyl rearrangement in the solid state (373 K) of closely related compounds, as shown by Kaftory & Handelsman- Benory (1994), Handelsman-Benory at al. (2000) and Kaftory (2002); therefore, methyl rearrangement in the solid state of (I) does not take place.
Scheme 1
Figures 1–3
Crystal data