Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807038913/at2366sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807038913/at2366Isup2.hkl |
CCDC reference: 660273
Key indicators
- Single-crystal X-ray study
- T = 294 K
- Mean (C-C) = 0.004 Å
- R factor = 0.047
- wR factor = 0.154
- Data-to-parameter ratio = 17.3
checkCIF/PLATON results
No syntax errors found
Alert level C ABSTY03_ALERT_1_C The _exptl_absorpt_correction_type has been given as none. However values have been given for Tmin and Tmax. Remove these if an absorption correction has not been applied. From the CIF: _exptl_absorpt_correction_T_min 0.979 From the CIF: _exptl_absorpt_correction_T_max 0.984 PLAT026_ALERT_3_C Ratio Observed / Unique Reflections too Low .... 43 Perc. PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ? PLAT066_ALERT_1_C Predicted and Reported Transmissions Identical . ? PLAT153_ALERT_1_C The su's on the Cell Axes are Equal (x 100000) 300 Ang. PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C10
Alert level G FORMU01_ALERT_1_G There is a discrepancy between the atom counts in the _chemical_formula_sum and _chemical_formula_moiety. This is usually due to the moiety formula being in the wrong format. Atom count from _chemical_formula_sum: C12 H18 N2 O3 Atom count from _chemical_formula_moiety:C12 H20 N2 O4 PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 15
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 6 ALERT level C = Check and explain 2 ALERT level G = General alerts; check 5 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
For related literature, see: Allen et al. (1987); Sutherland & Hoy (1968); Tucker et al. (1975).
A mixture of the p-methoxybenzaldehyde (0.1 mol), and propionylhydrazine (0.1 mol) was stirred in refluxing ethanol (30 ml) for 5 h to afford the title compound (I) (0.087 mol, yield 87%). Single crystals of (I) suitable for X-ray measurements were obtained by recrystallization from ethanol at room temperature.
H atoms were fixed geometrically and allowed to ride on their attached atoms, with C—H distances = 0.93–0.97 Å, N—H distances = 0.8600 Å and with Uiso = 1.2–1.5Ueq.
As an extension of our work on the structural characterization of Schiff base compound, herein we report the crystal and moulecular structures of the title compound (I). The title compound (I) is roughly planar. In (I), the bond lengths are within normal ranges (Allen et al., 1987) (Fig. 1). The C8—N1 distance of 1.274 (3) Å is similar to the reported value of 1.287 Å by Tucker et al. (1975). The C9—O2 distance of 1.227 (3) Å is shorter than the distance value of 1.298 Å reported by Sutherland & Hoy (1968).
The crystal structure of (I) is stabilized by N—H···O, O—H···O and O—H···N hydrogen bonds. (Table 1).
For related literature, see: Allen et al. (1987); Sutherland & Hoy (1968); Tucker et al. (1975).
Data collection: SMART (Bruker, 1997); cell refinement: SMART; data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL/PC (Sheldrick, 1990); software used to prepare material for publication: WinGX (Farrugia, 1999).
Fig. 1. The structure of the title molecule (I) showing 30% probability displacement ellipsoids and the atom-numbering scheme. |
C12H18N2O3·H2O | Z = 4 |
Mr = 238.28 | F(000) = 512 |
Monoclinic, P21/c | Dx = 1.133 Mg m−3 |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 11.184 (3) Å | θ = 2.0–26.5° |
b = 12.732 (3) Å | µ = 0.08 mm−1 |
c = 10.634 (3) Å | T = 294 K |
β = 112.636 (4)° | Block, colourless |
V = 1397.5 (6) Å3 | 0.26 × 0.24 × 0.20 mm |
Bruker SMART CCD area-detector diffractometer | 1213 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.049 |
Graphite monochromator | θmax = 26.5°, θmin = 2.0° |
φ and ω scans | h = −13→10 |
7894 measured reflections | k = −15→14 |
2852 independent reflections | l = −12→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.154 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.98 | w = 1/[σ2(Fo2) + (0.0667P)2 + 0.0773P] where P = (Fo2 + 2Fc2)/3 |
2852 reflections | (Δ/σ)max < 0.001 |
165 parameters | Δρmax = 0.13 e Å−3 |
15 restraints | Δρmin = −0.16 e Å−3 |
C12H18N2O3·H2O | V = 1397.5 (6) Å3 |
Mr = 238.28 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 11.184 (3) Å | µ = 0.08 mm−1 |
b = 12.732 (3) Å | T = 294 K |
c = 10.634 (3) Å | 0.26 × 0.24 × 0.20 mm |
β = 112.636 (4)° |
Bruker SMART CCD area-detector diffractometer | 1213 reflections with I > 2σ(I) |
7894 measured reflections | Rint = 0.049 |
2852 independent reflections |
R[F2 > 2σ(F2)] = 0.047 | 15 restraints |
wR(F2) = 0.154 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.98 | Δρmax = 0.13 e Å−3 |
2852 reflections | Δρmin = −0.16 e Å−3 |
165 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.36412 (18) | 0.09825 (15) | 0.47380 (19) | 0.0995 (6) | |
O2 | 1.00629 (16) | 0.38689 (14) | 1.11832 (17) | 0.0863 (6) | |
N1 | 0.82345 (19) | 0.23666 (15) | 1.0247 (2) | 0.0638 (5) | |
N2 | 0.91436 (18) | 0.23964 (15) | 1.1570 (2) | 0.0670 (6) | |
H2 | 0.9144 | 0.1918 | 1.2141 | 0.080* | |
C1 | 0.2678 (3) | 0.0190 (2) | 0.4440 (3) | 0.1101 (10) | |
H1A | 0.3086 | −0.0487 | 0.4649 | 0.165* | |
H1B | 0.2125 | 0.0218 | 0.3491 | 0.165* | |
H1C | 0.2170 | 0.0301 | 0.4980 | 0.165* | |
C2 | 0.4509 (2) | 0.1095 (2) | 0.6048 (3) | 0.0722 (7) | |
C3 | 0.5326 (2) | 0.1952 (2) | 0.6278 (3) | 0.0833 (8) | |
H3 | 0.5244 | 0.2406 | 0.5564 | 0.100* | |
C4 | 0.6260 (2) | 0.21393 (19) | 0.7550 (3) | 0.0747 (7) | |
H4 | 0.6795 | 0.2723 | 0.7689 | 0.090* | |
C5 | 0.6414 (2) | 0.14673 (18) | 0.8632 (2) | 0.0617 (6) | |
C6 | 0.5582 (3) | 0.0617 (2) | 0.8380 (3) | 0.0781 (7) | |
H6 | 0.5665 | 0.0157 | 0.9088 | 0.094* | |
C7 | 0.4627 (3) | 0.0433 (2) | 0.7104 (3) | 0.0795 (8) | |
H7 | 0.4071 | −0.0137 | 0.6965 | 0.095* | |
C8 | 0.7410 (2) | 0.16238 (18) | 0.9976 (2) | 0.0644 (7) | |
H8 | 0.7448 | 0.1164 | 1.0670 | 0.077* | |
C9 | 1.0029 (2) | 0.3173 (2) | 1.1967 (3) | 0.0678 (7) | |
C10 | 1.0954 (3) | 0.3134 (2) | 1.3437 (3) | 0.0921 (9) | |
H10 | 1.0901 | 0.2444 | 1.3820 | 0.111* | |
C11 | 1.2333 (3) | 0.3322 (3) | 1.3537 (3) | 0.1332 (13) | |
H11A | 1.2557 | 0.2799 | 1.3015 | 0.200* | |
H11B | 1.2920 | 0.3279 | 1.4473 | 0.200* | |
H11C | 1.2391 | 0.4007 | 1.3186 | 0.200* | |
C12 | 1.0567 (3) | 0.3982 (3) | 1.4220 (3) | 0.1276 (13) | |
H12A | 1.0604 | 0.4657 | 1.3835 | 0.191* | |
H12B | 1.1153 | 0.3970 | 1.5159 | 0.191* | |
H12C | 0.9701 | 0.3852 | 1.4161 | 0.191* | |
O3 | 0.88004 (18) | 0.41283 (14) | 0.83391 (17) | 0.0768 (5) | |
H3A | 0.917 (3) | 0.4731 (13) | 0.837 (3) | 0.121 (11)* | |
H3B | 0.905 (3) | 0.386 (2) | 0.9159 (16) | 0.147 (14)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0838 (13) | 0.1059 (15) | 0.0950 (15) | −0.0318 (11) | 0.0190 (12) | −0.0025 (11) |
O2 | 0.0979 (13) | 0.0678 (11) | 0.0771 (12) | −0.0194 (9) | 0.0160 (10) | 0.0196 (9) |
N1 | 0.0636 (12) | 0.0576 (12) | 0.0679 (14) | 0.0022 (10) | 0.0228 (11) | 0.0047 (10) |
N2 | 0.0715 (13) | 0.0582 (13) | 0.0657 (14) | −0.0021 (10) | 0.0203 (12) | 0.0131 (10) |
C1 | 0.088 (2) | 0.116 (2) | 0.112 (2) | −0.0408 (19) | 0.0237 (18) | −0.023 (2) |
C2 | 0.0594 (16) | 0.0748 (17) | 0.0794 (19) | −0.0090 (13) | 0.0234 (15) | −0.0017 (15) |
C3 | 0.0695 (17) | 0.0817 (19) | 0.089 (2) | −0.0175 (14) | 0.0195 (16) | 0.0179 (15) |
C4 | 0.0640 (16) | 0.0633 (16) | 0.0880 (19) | −0.0132 (12) | 0.0196 (15) | 0.0106 (14) |
C5 | 0.0605 (15) | 0.0534 (14) | 0.0760 (17) | 0.0002 (11) | 0.0315 (14) | 0.0012 (12) |
C6 | 0.0850 (18) | 0.0704 (17) | 0.0829 (19) | −0.0131 (14) | 0.0365 (17) | 0.0089 (14) |
C7 | 0.0737 (18) | 0.0677 (17) | 0.097 (2) | −0.0193 (13) | 0.0331 (17) | −0.0017 (16) |
C8 | 0.0677 (16) | 0.0557 (15) | 0.0751 (18) | 0.0040 (12) | 0.0331 (15) | 0.0060 (12) |
C9 | 0.0714 (17) | 0.0540 (15) | 0.0742 (17) | −0.0011 (13) | 0.0239 (14) | 0.0095 (14) |
C10 | 0.093 (2) | 0.081 (2) | 0.081 (2) | −0.0171 (16) | 0.0100 (17) | 0.0248 (16) |
C11 | 0.081 (2) | 0.137 (3) | 0.146 (3) | 0.007 (2) | 0.004 (2) | 0.033 (2) |
C12 | 0.149 (3) | 0.148 (3) | 0.088 (2) | −0.042 (2) | 0.049 (2) | −0.013 (2) |
O3 | 0.1092 (15) | 0.0565 (11) | 0.0653 (12) | −0.0040 (10) | 0.0342 (10) | −0.0018 (9) |
O1—C2 | 1.365 (3) | C5—C8 | 1.448 (3) |
O1—C1 | 1.421 (3) | C6—C7 | 1.386 (3) |
O2—C9 | 1.227 (3) | C6—H6 | 0.9300 |
N1—C8 | 1.274 (3) | C7—H7 | 0.9300 |
N1—N2 | 1.383 (2) | C8—H8 | 0.9300 |
N2—C9 | 1.347 (3) | C9—C10 | 1.507 (3) |
N2—H2 | 0.8600 | C10—C11 | 1.524 (4) |
C1—H1A | 0.9600 | C10—C12 | 1.524 (4) |
C1—H1B | 0.9600 | C10—H10 | 0.9800 |
C1—H1C | 0.9600 | C11—H11A | 0.9600 |
C2—C7 | 1.369 (3) | C11—H11B | 0.9600 |
C2—C3 | 1.383 (3) | C11—H11C | 0.9600 |
C3—C4 | 1.375 (3) | C12—H12A | 0.9600 |
C3—H3 | 0.9300 | C12—H12B | 0.9600 |
C4—C5 | 1.390 (3) | C12—H12C | 0.9600 |
C4—H4 | 0.9300 | O3—H3A | 0.865 (10) |
C5—C6 | 1.385 (3) | O3—H3B | 0.874 (10) |
C2—O1—C1 | 118.9 (2) | C2—C7—H7 | 120.2 |
C8—N1—N2 | 115.8 (2) | C6—C7—H7 | 120.2 |
C9—N2—N1 | 120.18 (19) | N1—C8—C5 | 122.7 (2) |
C9—N2—H2 | 119.9 | N1—C8—H8 | 118.7 |
N1—N2—H2 | 119.9 | C5—C8—H8 | 118.7 |
O1—C1—H1A | 109.5 | O2—C9—N2 | 121.9 (2) |
O1—C1—H1B | 109.5 | O2—C9—C10 | 122.6 (2) |
H1A—C1—H1B | 109.5 | N2—C9—C10 | 115.4 (2) |
O1—C1—H1C | 109.5 | C9—C10—C11 | 109.9 (2) |
H1A—C1—H1C | 109.5 | C9—C10—C12 | 108.5 (2) |
H1B—C1—H1C | 109.5 | C11—C10—C12 | 110.1 (3) |
O1—C2—C7 | 125.3 (2) | C9—C10—H10 | 109.4 |
O1—C2—C3 | 115.2 (2) | C11—C10—H10 | 109.4 |
C7—C2—C3 | 119.5 (3) | C12—C10—H10 | 109.4 |
C4—C3—C2 | 120.7 (2) | C10—C11—H11A | 109.5 |
C4—C3—H3 | 119.6 | C10—C11—H11B | 109.5 |
C2—C3—H3 | 119.6 | H11A—C11—H11B | 109.5 |
C3—C4—C5 | 120.9 (2) | C10—C11—H11C | 109.5 |
C3—C4—H4 | 119.6 | H11A—C11—H11C | 109.5 |
C5—C4—H4 | 119.6 | H11B—C11—H11C | 109.5 |
C6—C5—C4 | 117.4 (2) | C10—C12—H12A | 109.5 |
C6—C5—C8 | 120.2 (2) | C10—C12—H12B | 109.5 |
C4—C5—C8 | 122.4 (2) | H12A—C12—H12B | 109.5 |
C5—C6—C7 | 121.9 (2) | C10—C12—H12C | 109.5 |
C5—C6—H6 | 119.0 | H12A—C12—H12C | 109.5 |
C7—C6—H6 | 119.0 | H12B—C12—H12C | 109.5 |
C2—C7—C6 | 119.6 (2) | H3A—O3—H3B | 110.1 (15) |
C8—N1—N2—C9 | −177.8 (2) | C3—C2—C7—C6 | −1.3 (4) |
C1—O1—C2—C7 | 7.3 (4) | C5—C6—C7—C2 | 1.1 (4) |
C1—O1—C2—C3 | −173.5 (2) | N2—N1—C8—C5 | −178.47 (19) |
O1—C2—C3—C4 | −178.7 (2) | C6—C5—C8—N1 | 177.0 (2) |
C7—C2—C3—C4 | 0.5 (4) | C4—C5—C8—N1 | −2.3 (3) |
C2—C3—C4—C5 | 0.7 (4) | N1—N2—C9—O2 | −0.1 (3) |
C3—C4—C5—C6 | −1.0 (4) | N1—N2—C9—C10 | 179.0 (2) |
C3—C4—C5—C8 | 178.3 (2) | O2—C9—C10—C11 | −46.6 (4) |
C4—C5—C6—C7 | 0.1 (4) | N2—C9—C10—C11 | 134.3 (3) |
C8—C5—C6—C7 | −179.2 (2) | O2—C9—C10—C12 | 73.9 (3) |
O1—C2—C7—C6 | 177.8 (2) | N2—C9—C10—C12 | −105.3 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O3i | 0.86 | 1.98 | 2.830 (2) | 170 |
O3—H3A···O2ii | 0.87 (1) | 1.96 (1) | 2.807 (2) | 167 (3) |
O3—H3B···O2 | 0.87 (1) | 2.01 (2) | 2.822 (2) | 154 (2) |
O3—H3B···N1 | 0.87 (1) | 2.57 (2) | 3.246 (3) | 135 (2) |
Symmetry codes: (i) x, −y+1/2, z+1/2; (ii) −x+2, −y+1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C12H18N2O3·H2O |
Mr | 238.28 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 294 |
a, b, c (Å) | 11.184 (3), 12.732 (3), 10.634 (3) |
β (°) | 112.636 (4) |
V (Å3) | 1397.5 (6) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.26 × 0.24 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7894, 2852, 1213 |
Rint | 0.049 |
(sin θ/λ)max (Å−1) | 0.627 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.154, 0.98 |
No. of reflections | 2852 |
No. of parameters | 165 |
No. of restraints | 15 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.13, −0.16 |
Computer programs: SMART (Bruker, 1997), SMART, SAINT (Bruker, 1997), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL/PC (Sheldrick, 1990), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O3i | 0.86 | 1.98 | 2.830 (2) | 169.5 |
O3—H3A···O2ii | 0.865 (10) | 1.957 (12) | 2.807 (2) | 167 (3) |
O3—H3B···O2 | 0.874 (10) | 2.011 (16) | 2.822 (2) | 154 (2) |
O3—H3B···N1 | 0.874 (10) | 2.570 (19) | 3.246 (3) | 135 (2) |
Symmetry codes: (i) x, −y+1/2, z+1/2; (ii) −x+2, −y+1, −z+2. |
Subscribe to Acta Crystallographica Section E: Crystallographic Communications
The full text of this article is available to subscribers to the journal.
- Information on subscribing
- Sample issue
- If you have already subscribed, you may need to register
As an extension of our work on the structural characterization of Schiff base compound, herein we report the crystal and moulecular structures of the title compound (I). The title compound (I) is roughly planar. In (I), the bond lengths are within normal ranges (Allen et al., 1987) (Fig. 1). The C8—N1 distance of 1.274 (3) Å is similar to the reported value of 1.287 Å by Tucker et al. (1975). The C9—O2 distance of 1.227 (3) Å is shorter than the distance value of 1.298 Å reported by Sutherland & Hoy (1968).
The crystal structure of (I) is stabilized by N—H···O, O—H···O and O—H···N hydrogen bonds. (Table 1).