Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807026839/at2317sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807026839/at2317Isup2.hkl |
CCDC reference: 654882
Key indicators
- Single-crystal X-ray study
- T = 273 K
- Mean (C-C) = 0.002 Å
- R factor = 0.037
- wR factor = 0.110
- Data-to-parameter ratio = 19.6
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT153_ALERT_1_C The su's on the Cell Axes are Equal (x 100000) 20 Ang.
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 1 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
For related literature, see: Antonov et al. (1998), (1999); Betteridge & John (1973); Burawoy et al. (1954); Das et al. (2006); Ersanlı et al. (2005); Karadayı et al. (2006); Liu et al. (2005); Li et al. (2004); Moggach et al. (2005); Pollard et al. (1959); Portilla et al. (2007); Şahin et al. (2005).
1-[2-(Methylsulfanyl)phenyldiazenyl]-4-hydroxybenzene was prepared according to the literature method (Burawoy et al., 1954), using Phenol and 2-methylthioaniline as starting materials. The product was crystallized from ethanol (Yield: 67%; m.p. 360 K). Suitable crystals of (I) were obtained by slow diffusion of a dichloromethane solution into n-hexane.
H atoms were included at calculated positions as riding atoms with C–H set to 0.93 Å for (aromatic) and 0.96 Å for (CH3) H atoms, with Uiso(H) = 1.2Ueq(C) (1.5Ueq for methyl group).
Organic molecules containing the diazene moiety are among the largest group of dyes. The extensive application of azo dyes in industry and analytical chemistry have attracted attention for decades. Some arylazo compounds derived from resorcinol or β-naphthol have been widely used in the spectrophotometric determination of traces of metals (Betteridge & John, 1973; Pollard et al., 1959). Optically active azobenzene polymers are very important functional materials because of their photoresponsive properties. The position of azo and hydroxyl groups in arylazo compounds brings into play the azo-hydrazo equilibrium, which has been the subject of intensive investigation in recent years (Antonov et al., 1998, 1999). Generally arylazonaphthalenes have been found to exist in the hydrazo-keto form in the solid state (Liu et al., 2005). Here in, we report the crystal structure of (E)-1-[2-(methylsulfanyl)phenyldiazenyl]-4-hydroxybenzene where the azo-enol form has been found to be retained in the solid state.
The asymmetric unit of the title compound, (I), is shown in Fig. 1, with the atom-numbering scheme. Phenyl rings of the molecule adopt a trans configuration about the azo functional group. Three planar fragments in the molecular structure of (I) may be identified: the phenyl ring (C1–C6) connected to N1 (A), azo group along with C1 and C7 (B) and the benzene ring (C7–C12) connected to N2 (C). The dihedral angles between the planes A/B, B/C and A/C are 8.61 (14), 25.95 (10) and 33.88 (06)°, respectively.
The molecular arrangement of (I) has been shown in Fig. 2. The N1\═N2 bond length, 1.2569 (17) Å of the title compound is slightly smaller than other trans azo compounds (Ersanlı et al., 2005; Das et al., 2006). Both the C—N bonds distances of the title compound are almost equal; the values are typical of trans azo compounds (Karadayı et al., 2006). The S—C bond distances are in good agreement with the reported S—C distances under similar hybridization schemes of the bonded carbon atom (Li et al., 2004; Moggach et al., 2005). The O—C distance of the hydroxy group is in good agreement with the literature values (Şahin et al., 2005).
The H···N seperation of 2.04 Å implies a strong interaction (Portilla et al., 2007). The supramolecular structure of compound (I) is simple. A chain structure results by the intermolecular hydrogen-bonds where O1 atom in the molecule at (-x, 1/2 + y, 1/2 - z) acts as a hydrogen-bond donor, via H1, to the N1atom in the molecule at (x,1/2 - y,1/2 + z) (Table 1) (Fig. 3).
For related literature, see: Antonov et al. (1998), (1999); Betteridge & John (1973); Burawoy et al. (1954); Das et al. (2006); Ersanlı et al. (2005); Karadayı et al. (2006); Liu et al. (2005); Li et al. (2004); Moggach et al. (2005); Pollard et al. (1959); Portilla et al. (2007); Şahin et al. (2005).
Data collection: SMART (Bruker, 1998); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXL97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 1997); software used to prepare material for publication: SHELXTL.
C13H12N2OS | F(000) = 512 |
Mr = 244.31 | Dx = 1.324 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 3053 reflections |
a = 11.8379 (2) Å | θ = 2.9–28.3° |
b = 8.6159 (2) Å | µ = 0.25 mm−1 |
c = 12.5056 (2) Å | T = 273 K |
β = 106.029 (1)° | Block, orange |
V = 1225.91 (4) Å3 | 0.32 × 0.12 × 0.11 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 3053 independent reflections |
Radiation source: fine-focus sealed tube | 2508 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.018 |
φ and ω scans | θmax = 28.3°, θmin = 2.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −15→15 |
Tmin = 0.963, Tmax = 0.974 | k = −11→11 |
15771 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.037 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.110 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.055P)2 + 0.2258P] where P = (Fo2 + 2Fc2)/3 |
3053 reflections | (Δ/σ)max < 0.001 |
156 parameters | Δρmax = 0.30 e Å−3 |
0 restraints | Δρmin = −0.36 e Å−3 |
C13H12N2OS | V = 1225.91 (4) Å3 |
Mr = 244.31 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 11.8379 (2) Å | µ = 0.25 mm−1 |
b = 8.6159 (2) Å | T = 273 K |
c = 12.5056 (2) Å | 0.32 × 0.12 × 0.11 mm |
β = 106.029 (1)° |
Bruker SMART CCD area-detector diffractometer | 3053 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | 2508 reflections with I > 2σ(I) |
Tmin = 0.963, Tmax = 0.974 | Rint = 0.018 |
15771 measured reflections |
R[F2 > 2σ(F2)] = 0.037 | 0 restraints |
wR(F2) = 0.110 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.30 e Å−3 |
3053 reflections | Δρmin = −0.36 e Å−3 |
156 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | −0.01841 (4) | 0.01491 (5) | 0.74707 (4) | 0.06431 (15) | |
C1 | 0.36949 (11) | 0.13649 (15) | 0.94129 (9) | 0.0450 (3) | |
C2 | 0.30360 (12) | 0.15560 (17) | 1.01740 (11) | 0.0517 (3) | |
H2 | 0.2325 | 0.1036 | 1.0071 | 0.062* | |
C4 | 0.45018 (12) | 0.33051 (16) | 1.12358 (10) | 0.0499 (3) | |
C3 | 0.34444 (13) | 0.25175 (17) | 1.10772 (11) | 0.0550 (3) | |
H3 | 0.3008 | 0.2641 | 1.1586 | 0.066* | |
C6 | 0.47552 (13) | 0.21233 (19) | 0.95873 (12) | 0.0565 (3) | |
H6 | 0.5200 | 0.1984 | 0.9087 | 0.068* | |
C5 | 0.51672 (13) | 0.3089 (2) | 1.04954 (12) | 0.0586 (4) | |
H5 | 0.5887 | 0.3589 | 1.0608 | 0.070* | |
C8 | 0.06544 (12) | −0.09020 (15) | 0.67607 (11) | 0.0504 (3) | |
C7 | 0.18786 (13) | −0.08959 (15) | 0.72203 (11) | 0.0511 (3) | |
C9 | 0.01938 (15) | −0.17087 (18) | 0.57666 (12) | 0.0610 (4) | |
H9 | −0.0612 | −0.1703 | 0.5434 | 0.073* | |
C10 | 0.09249 (17) | −0.25136 (19) | 0.52751 (13) | 0.0707 (5) | |
H10 | 0.0605 | −0.3049 | 0.4615 | 0.085* | |
C12 | 0.26046 (15) | −0.17292 (19) | 0.67215 (14) | 0.0646 (4) | |
H12 | 0.3413 | −0.1743 | 0.7042 | 0.078* | |
C11 | 0.21193 (18) | −0.2535 (2) | 0.57485 (16) | 0.0739 (5) | |
H11 | 0.2602 | −0.3092 | 0.5413 | 0.089* | |
N1 | 0.33188 (10) | 0.04703 (13) | 0.84242 (9) | 0.0483 (3) | |
N2 | 0.22843 (11) | −0.00323 (13) | 0.82199 (9) | 0.0517 (3) | |
O1 | 0.49329 (10) | 0.42891 (14) | 1.21012 (8) | 0.0643 (3) | |
H1 | 0.4451 | 0.4387 | 1.2458 | 0.096* | |
C13 | −0.16635 (16) | −0.0417 (3) | 0.67795 (19) | 0.0875 (6) | |
H13A | −0.1858 | −0.0089 | 0.6017 | 0.131* | |
H13B | −0.2192 | 0.0061 | 0.7141 | 0.131* | |
H13C | −0.1732 | −0.1525 | 0.6811 | 0.131* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0637 (3) | 0.0630 (2) | 0.0638 (2) | 0.00088 (17) | 0.01359 (18) | −0.01475 (17) |
C1 | 0.0502 (7) | 0.0448 (6) | 0.0377 (6) | 0.0045 (5) | 0.0082 (5) | 0.0034 (5) |
C2 | 0.0536 (7) | 0.0536 (7) | 0.0485 (7) | −0.0055 (6) | 0.0153 (5) | −0.0003 (6) |
C4 | 0.0561 (7) | 0.0516 (7) | 0.0388 (6) | 0.0002 (6) | 0.0078 (5) | 0.0013 (5) |
C3 | 0.0617 (8) | 0.0616 (8) | 0.0454 (7) | −0.0038 (6) | 0.0208 (6) | −0.0030 (6) |
C6 | 0.0537 (7) | 0.0706 (9) | 0.0472 (7) | −0.0022 (7) | 0.0173 (6) | −0.0053 (6) |
C5 | 0.0512 (7) | 0.0727 (9) | 0.0516 (7) | −0.0108 (7) | 0.0137 (6) | −0.0069 (7) |
C8 | 0.0632 (8) | 0.0423 (6) | 0.0444 (6) | −0.0055 (6) | 0.0125 (6) | −0.0002 (5) |
C7 | 0.0631 (8) | 0.0440 (6) | 0.0449 (6) | −0.0023 (6) | 0.0127 (6) | −0.0024 (5) |
C9 | 0.0725 (9) | 0.0567 (8) | 0.0501 (7) | −0.0122 (7) | 0.0111 (7) | −0.0052 (6) |
C10 | 0.0986 (13) | 0.0625 (9) | 0.0532 (8) | −0.0193 (9) | 0.0245 (8) | −0.0184 (7) |
C12 | 0.0686 (9) | 0.0593 (9) | 0.0679 (9) | −0.0008 (7) | 0.0220 (7) | −0.0117 (7) |
C11 | 0.0890 (12) | 0.0652 (10) | 0.0748 (10) | −0.0068 (9) | 0.0347 (9) | −0.0235 (8) |
N1 | 0.0547 (6) | 0.0469 (6) | 0.0414 (5) | 0.0032 (5) | 0.0100 (4) | 0.0020 (4) |
N2 | 0.0562 (7) | 0.0517 (6) | 0.0448 (6) | −0.0003 (5) | 0.0099 (5) | −0.0039 (5) |
O1 | 0.0679 (7) | 0.0755 (7) | 0.0488 (5) | −0.0126 (6) | 0.0153 (5) | −0.0142 (5) |
C13 | 0.0623 (10) | 0.1049 (15) | 0.0930 (13) | −0.0035 (10) | 0.0177 (9) | −0.0171 (12) |
S1—C8 | 1.7551 (14) | C8—C7 | 1.404 (2) |
S1—C13 | 1.793 (2) | C7—C12 | 1.393 (2) |
C1—C6 | 1.378 (2) | C7—N2 | 1.4197 (17) |
C1—C2 | 1.3969 (18) | C9—C10 | 1.379 (2) |
C1—N1 | 1.4202 (16) | C9—H9 | 0.9300 |
C2—C3 | 1.3763 (19) | C10—C11 | 1.374 (3) |
C2—H2 | 0.9300 | C10—H10 | 0.9300 |
C4—O1 | 1.3584 (16) | C12—C11 | 1.381 (2) |
C4—C5 | 1.384 (2) | C12—H12 | 0.9300 |
C4—C3 | 1.389 (2) | C11—H11 | 0.9300 |
C3—H3 | 0.9300 | N1—N2 | 1.2569 (17) |
C6—C5 | 1.383 (2) | O1—H1 | 0.8200 |
C6—H6 | 0.9300 | C13—H13A | 0.9600 |
C5—H5 | 0.9300 | C13—H13B | 0.9600 |
C8—C9 | 1.3970 (19) | C13—H13C | 0.9600 |
C8—S1—C13 | 103.26 (8) | C12—C7—N2 | 124.33 (14) |
C6—C1—C2 | 119.46 (12) | C8—C7—N2 | 114.99 (12) |
C6—C1—N1 | 116.62 (11) | C10—C9—C8 | 120.53 (15) |
C2—C1—N1 | 123.87 (12) | C10—C9—H9 | 119.7 |
C3—C2—C1 | 119.63 (13) | C8—C9—H9 | 119.7 |
C3—C2—H2 | 120.2 | C11—C10—C9 | 120.83 (15) |
C1—C2—H2 | 120.2 | C11—C10—H10 | 119.6 |
O1—C4—C5 | 117.33 (13) | C9—C10—H10 | 119.6 |
O1—C4—C3 | 122.96 (12) | C11—C12—C7 | 119.72 (16) |
C5—C4—C3 | 119.71 (12) | C11—C12—H12 | 120.1 |
C2—C3—C4 | 120.64 (13) | C7—C12—H12 | 120.1 |
C2—C3—H3 | 119.7 | C10—C11—C12 | 120.09 (16) |
C4—C3—H3 | 119.7 | C10—C11—H11 | 120.0 |
C1—C6—C5 | 120.95 (13) | C12—C11—H11 | 120.0 |
C1—C6—H6 | 119.5 | N2—N1—C1 | 114.68 (11) |
C5—C6—H6 | 119.5 | N1—N2—C7 | 115.68 (12) |
C6—C5—C4 | 119.57 (13) | C4—O1—H1 | 109.5 |
C6—C5—H5 | 120.2 | S1—C13—H13A | 109.5 |
C4—C5—H5 | 120.2 | S1—C13—H13B | 109.5 |
C9—C8—C7 | 118.13 (13) | H13A—C13—H13B | 109.5 |
C9—C8—S1 | 124.79 (12) | S1—C13—H13C | 109.5 |
C7—C8—S1 | 117.07 (10) | H13A—C13—H13C | 109.5 |
C12—C7—C8 | 120.65 (13) | H13B—C13—H13C | 109.5 |
C6—C1—C2—C3 | 1.1 (2) | C9—C8—C7—N2 | 179.00 (12) |
N1—C1—C2—C3 | −176.31 (12) | S1—C8—C7—N2 | 0.34 (16) |
C1—C2—C3—C4 | 0.3 (2) | C7—C8—C9—C10 | 2.0 (2) |
O1—C4—C3—C2 | 178.74 (13) | S1—C8—C9—C10 | −179.45 (12) |
C5—C4—C3—C2 | −1.8 (2) | C8—C9—C10—C11 | −0.3 (3) |
C2—C1—C6—C5 | −1.0 (2) | C8—C7—C12—C11 | 1.8 (2) |
N1—C1—C6—C5 | 176.56 (14) | N2—C7—C12—C11 | 179.87 (15) |
C1—C6—C5—C4 | −0.4 (2) | C9—C10—C11—C12 | −0.8 (3) |
O1—C4—C5—C6 | −178.66 (14) | C7—C12—C11—C10 | 0.0 (3) |
C3—C4—C5—C6 | 1.8 (2) | C6—C1—N1—N2 | −170.97 (12) |
C13—S1—C8—C9 | 11.12 (16) | C2—C1—N1—N2 | 6.47 (18) |
C13—S1—C8—C7 | −170.32 (12) | C1—N1—N2—C7 | 178.42 (10) |
C9—C8—C7—C12 | −2.8 (2) | C12—C7—N2—N1 | 27.0 (2) |
S1—C8—C7—C12 | 178.57 (12) | C8—C7—N2—N1 | −154.82 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1i | 0.82 | 2.04 | 2.8596 (16) | 176 |
Symmetry code: (i) x, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C13H12N2OS |
Mr | 244.31 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 273 |
a, b, c (Å) | 11.8379 (2), 8.6159 (2), 12.5056 (2) |
β (°) | 106.029 (1) |
V (Å3) | 1225.91 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.25 |
Crystal size (mm) | 0.32 × 0.12 × 0.11 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2000) |
Tmin, Tmax | 0.963, 0.974 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15771, 3053, 2508 |
Rint | 0.018 |
(sin θ/λ)max (Å−1) | 0.668 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.037, 0.110, 1.03 |
No. of reflections | 3053 |
No. of parameters | 156 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.30, −0.36 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 2000), SAINT, SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 1997), SHELXTL.
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1i | 0.82 | 2.04 | 2.8596 (16) | 176 |
Symmetry code: (i) x, −y+1/2, z+1/2. |
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Organic molecules containing the diazene moiety are among the largest group of dyes. The extensive application of azo dyes in industry and analytical chemistry have attracted attention for decades. Some arylazo compounds derived from resorcinol or β-naphthol have been widely used in the spectrophotometric determination of traces of metals (Betteridge & John, 1973; Pollard et al., 1959). Optically active azobenzene polymers are very important functional materials because of their photoresponsive properties. The position of azo and hydroxyl groups in arylazo compounds brings into play the azo-hydrazo equilibrium, which has been the subject of intensive investigation in recent years (Antonov et al., 1998, 1999). Generally arylazonaphthalenes have been found to exist in the hydrazo-keto form in the solid state (Liu et al., 2005). Here in, we report the crystal structure of (E)-1-[2-(methylsulfanyl)phenyldiazenyl]-4-hydroxybenzene where the azo-enol form has been found to be retained in the solid state.
The asymmetric unit of the title compound, (I), is shown in Fig. 1, with the atom-numbering scheme. Phenyl rings of the molecule adopt a trans configuration about the azo functional group. Three planar fragments in the molecular structure of (I) may be identified: the phenyl ring (C1–C6) connected to N1 (A), azo group along with C1 and C7 (B) and the benzene ring (C7–C12) connected to N2 (C). The dihedral angles between the planes A/B, B/C and A/C are 8.61 (14), 25.95 (10) and 33.88 (06)°, respectively.
The molecular arrangement of (I) has been shown in Fig. 2. The N1\═N2 bond length, 1.2569 (17) Å of the title compound is slightly smaller than other trans azo compounds (Ersanlı et al., 2005; Das et al., 2006). Both the C—N bonds distances of the title compound are almost equal; the values are typical of trans azo compounds (Karadayı et al., 2006). The S—C bond distances are in good agreement with the reported S—C distances under similar hybridization schemes of the bonded carbon atom (Li et al., 2004; Moggach et al., 2005). The O—C distance of the hydroxy group is in good agreement with the literature values (Şahin et al., 2005).
The H···N seperation of 2.04 Å implies a strong interaction (Portilla et al., 2007). The supramolecular structure of compound (I) is simple. A chain structure results by the intermolecular hydrogen-bonds where O1 atom in the molecule at (-x, 1/2 + y, 1/2 - z) acts as a hydrogen-bond donor, via H1, to the N1atom in the molecule at (x,1/2 - y,1/2 + z) (Table 1) (Fig. 3).