Buy article online - an online subscription or single-article purchase is required to access this article.
Download citation
Download citation
link to html
In the mol­ecular structure of the title compound, C14H14N4O2S, the benzoxazoline group is essentially planar, with a maximum deviation of 0.0358 (2) Å. N—H...S and C—H...S hydrogen bonds are primary inter­actions n the crystal structure. π–π Stacking inter­actions are present between the oxazoline ring systems, which are aligned in a parallel manner. The closest inter­action has a perpendicular separation of 3.4 Å.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807017163/at2265sup1.cif
Contains datablocks global, I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536807017163/at2265Isup2.hkl
Contains datablock I

CCDC reference: 647578

Key indicators

  • Single-crystal X-ray study
  • T = 293 K
  • Mean [sigma](C-C) = 0.004 Å
  • Disorder in main residue
  • R factor = 0.042
  • wR factor = 0.123
  • Data-to-parameter ratio = 13.8

checkCIF/PLATON results

No syntax errors found



Alert level C PLAT063_ALERT_3_C Crystal Probably too Large for Beam Size ....... 0.66 mm PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.18 Ratio PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C12 PLAT301_ALERT_3_C Main Residue Disorder ......................... 5.00 Perc.
Alert level G PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_G Check the Reported _diffrn_ambient_temperature . 293 K
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 4 ALERT level C = Check and explain 2 ALERT level G = General alerts; check 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 2 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check

Comment top

In the title compound, (I) (Fig. 1), the benzoxazoline ring system is essentially planar, with a maximum deviation from the mean plane of the nine-membered ring of -0.0358 (2) Å for atom C8. The C—N bond distances and angles are in agreement with values in our related structure, 3-[4-(2-chlorophenyl)piperazinomethyl]-5-methyl-1-benzoxazolin-2(3H)-one (Koysal et al., 2003). The dihedral angle between the triazole and benzoxazoline ring systems is 68.62 (8)°. The anisotropic displacement parameters of allyl group atoms C13 and C14 are larger than those of the other atoms, suggesting that this group could be affected by high thermal motion.

The structure of compound (I) contains two intermolecular contacts, N3—H3···S1i and C14A—H14C···S1ii (Table 2). The adjacent S atom forms intermolecular hydrogen bonds linking the molecules into a three-dimensional network generating graph set R22(8) (Bernstein et al., 1995).

ππ stacking interactions are present in (I), with the oxazoline ring systems aligned in a parallel manner. The closest interaction with a perpendicular seperation is 3.4 Å.

Related literature top

The synthesis of the title compound was published by Salgın et al. (2007). In the title compound, the benzoxazoline ring system is essentially planar, with a maximum deviation from the mean plane of the nine-membered ring of -0.0358 (2) Å for atom C8. The C—N bond distances and angles in the title compound are in agreement with values in our related structure (Koysal et al., 2003).

For related literature, see: Bernstein et al. (1995).

Experimental top

The synthesis of the title compound and related derivatives was published by Salgın et al. (2007).

Refinement top

In compound (I), atom C14 of the allyl group is disordered over two positions, with site occupancies of 0.64 (2) and 0.36 (2). The atomic displacement parameters are only slightly larger than those of the other atoms. The missing H atom in the allyl group could not be determined, either by fixing or by Fourier map, because disordered atom C14 atom is unexpectedly close to C13. N-bound atom N3 was located in a difference map and refined freely. The remaining H atoms were located geometrically and refined using a riding model, with C—H = 0.93 Å for aromatic H, 0.97 Å for CH2 and 0.96 Å for methyl H, and with Uiso(H) = 1.2Ueq(C).

Structure description top

In the title compound, (I) (Fig. 1), the benzoxazoline ring system is essentially planar, with a maximum deviation from the mean plane of the nine-membered ring of -0.0358 (2) Å for atom C8. The C—N bond distances and angles are in agreement with values in our related structure, 3-[4-(2-chlorophenyl)piperazinomethyl]-5-methyl-1-benzoxazolin-2(3H)-one (Koysal et al., 2003). The dihedral angle between the triazole and benzoxazoline ring systems is 68.62 (8)°. The anisotropic displacement parameters of allyl group atoms C13 and C14 are larger than those of the other atoms, suggesting that this group could be affected by high thermal motion.

The structure of compound (I) contains two intermolecular contacts, N3—H3···S1i and C14A—H14C···S1ii (Table 2). The adjacent S atom forms intermolecular hydrogen bonds linking the molecules into a three-dimensional network generating graph set R22(8) (Bernstein et al., 1995).

ππ stacking interactions are present in (I), with the oxazoline ring systems aligned in a parallel manner. The closest interaction with a perpendicular seperation is 3.4 Å.

The synthesis of the title compound was published by Salgın et al. (2007). In the title compound, the benzoxazoline ring system is essentially planar, with a maximum deviation from the mean plane of the nine-membered ring of -0.0358 (2) Å for atom C8. The C—N bond distances and angles in the title compound are in agreement with values in our related structure (Koysal et al., 2003).

For related literature, see: Bernstein et al. (1995).

Computing details top

Data collection: X-AREA (Stoe & Cie, 2002); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPIII (Burnett & Johnson, 1996); software used to prepare material for publication: WinGX (Farrugia, 1999) and PARST (Nardelli, 1995).

Figures top
[Figure 1] Fig. 1. The structure of compound (I), showing 50% probability displacement ellipsoids and the atom-numbering scheme.
[Figure 2] Fig. 2. A view of the C—H···S interactions between the molecules, down the c axis. Hydrogen bonds are indicated by dashed lines.
4-Allyl-3-[(5-methyl-2-oxo-1,3-benzoxazol-3-yl)methyl]-1H-1,2,4- triazole-5(4H)-thione top
Crystal data top
C14H13N4O2SF(000) = 1256
Mr = 301.34Dx = 1.375 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 28896 reflections
a = 7.2848 (3) Åθ = 2.0–27.2°
b = 19.9139 (7) ŵ = 0.23 mm1
c = 20.0634 (10) ÅT = 293 K
V = 2910.6 (2) Å3Prismatic plate, colourless
Z = 80.66 × 0.43 × 0.11 mm
Data collection top
Stoe IPDS II
diffractometer
2852 independent reflections
Radiation source: fine-focus sealed tube2153 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.078
Detector resolution: 6.67 pixels mm-1θmax = 26.0°, θmin = 2.0°
ω scansh = 88
Absorption correction: integration
(X-RED32; Stoe & Cie, 2002)
k = 2424
Tmin = 0.881, Tmax = 0.975l = 2424
32373 measured reflections
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.123 w = 1/[σ2(Fo2) + (0.0768P)2 + 0.4236P]
where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max = 0.001
2852 reflectionsΔρmax = 0.36 e Å3
206 parametersΔρmin = 0.19 e Å3
40 restraintsExtinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0127 (14)
Crystal data top
C14H13N4O2SV = 2910.6 (2) Å3
Mr = 301.34Z = 8
Orthorhombic, PbcaMo Kα radiation
a = 7.2848 (3) ŵ = 0.23 mm1
b = 19.9139 (7) ÅT = 293 K
c = 20.0634 (10) Å0.66 × 0.43 × 0.11 mm
Data collection top
Stoe IPDS II
diffractometer
2852 independent reflections
Absorption correction: integration
(X-RED32; Stoe & Cie, 2002)
2153 reflections with I > 2σ(I)
Tmin = 0.881, Tmax = 0.975Rint = 0.078
32373 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.04240 restraints
wR(F2) = 0.123H atoms treated by a mixture of independent and constrained refinement
S = 1.00Δρmax = 0.36 e Å3
2852 reflectionsΔρmin = 0.19 e Å3
206 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/UeqOcc. (<1)
C10.5897 (3)0.58195 (10)0.72142 (10)0.0474 (5)
C20.5409 (3)0.64148 (11)0.69131 (12)0.0546 (5)
H20.53780.64560.64510.065*
C30.4962 (3)0.69562 (12)0.73275 (13)0.0618 (6)
C40.5000 (4)0.68683 (14)0.80144 (14)0.0700 (7)
H40.46820.72290.82850.084*
C50.5491 (3)0.62663 (14)0.83159 (13)0.0666 (6)
H50.55090.62160.87770.080*
C60.5942 (3)0.57553 (11)0.78965 (11)0.0527 (5)
C70.4474 (4)0.76210 (13)0.70312 (19)0.0875 (9)
H7A0.40610.75580.65810.105*
H7B0.55340.79070.70330.105*
H7C0.35140.78250.72890.105*
C80.6892 (3)0.47767 (11)0.74739 (11)0.0550 (5)
C90.6716 (3)0.50349 (11)0.62625 (10)0.0505 (5)
H9A0.74280.46250.62270.061*
H9B0.73980.53910.60450.061*
C100.4916 (3)0.49418 (10)0.59153 (9)0.0449 (5)
C110.2362 (3)0.44848 (11)0.55338 (9)0.0474 (5)
C120.4464 (3)0.36922 (11)0.61302 (12)0.0563 (5)
H12A0.33750.34570.62820.068*
H12B0.52830.37440.65080.068*
C130.5381 (6)0.32939 (16)0.5608 (2)0.1045 (12)
C14A0.6727 (11)0.2975 (3)0.5582 (4)0.143 (3)0.747 (11)
H14A0.67020.25460.54000.171*0.747 (11)
H14B0.78230.31510.57430.171*0.747 (11)
C14B0.508 (3)0.2757 (7)0.5359 (8)0.116 (8)0.253 (11)
H14C0.60330.24490.53060.140*0.253 (11)
H14D0.39030.26480.52190.140*0.253 (11)
N10.6470 (2)0.52012 (8)0.69605 (8)0.0487 (4)
N20.3945 (2)0.43549 (8)0.58771 (8)0.0454 (4)
N30.2479 (3)0.51378 (9)0.53926 (8)0.0484 (4)
N40.4057 (2)0.54327 (9)0.56249 (8)0.0484 (4)
O10.6534 (2)0.51119 (8)0.80607 (7)0.0610 (4)
O20.7479 (3)0.42155 (8)0.74514 (9)0.0727 (5)
S10.06870 (8)0.39441 (3)0.53337 (3)0.0651 (2)
H30.164 (4)0.5385 (13)0.5201 (14)0.074 (8)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.0413 (10)0.0534 (11)0.0476 (11)0.0027 (8)0.0055 (8)0.0018 (9)
C20.0520 (12)0.0544 (12)0.0574 (13)0.0014 (9)0.0062 (10)0.0018 (10)
C30.0502 (12)0.0550 (12)0.0802 (17)0.0001 (10)0.0047 (12)0.0064 (11)
C40.0606 (14)0.0706 (15)0.0787 (17)0.0002 (12)0.0043 (13)0.0218 (13)
C50.0648 (15)0.0831 (17)0.0519 (13)0.0045 (13)0.0002 (11)0.0119 (12)
C60.0480 (11)0.0622 (13)0.0480 (11)0.0032 (9)0.0053 (9)0.0011 (10)
C70.0822 (19)0.0572 (15)0.123 (3)0.0068 (13)0.0054 (18)0.0013 (16)
C80.0544 (12)0.0580 (13)0.0525 (12)0.0011 (10)0.0115 (9)0.0045 (10)
C90.0484 (11)0.0576 (11)0.0455 (10)0.0002 (9)0.0018 (9)0.0024 (9)
C100.0488 (11)0.0485 (10)0.0373 (9)0.0006 (8)0.0032 (8)0.0013 (8)
C110.0509 (11)0.0525 (11)0.0389 (9)0.0006 (9)0.0003 (8)0.0009 (8)
C120.0599 (13)0.0515 (11)0.0576 (13)0.0005 (10)0.0057 (10)0.0097 (10)
C130.135 (3)0.0572 (17)0.121 (3)0.0325 (19)0.045 (2)0.0157 (18)
C14A0.133 (6)0.090 (4)0.205 (7)0.012 (4)0.068 (6)0.026 (4)
C14B0.109 (14)0.119 (13)0.121 (12)0.049 (10)0.011 (9)0.052 (9)
N10.0518 (10)0.0512 (9)0.0431 (9)0.0012 (7)0.0073 (8)0.0017 (7)
N20.0500 (9)0.0463 (9)0.0398 (8)0.0002 (7)0.0007 (7)0.0005 (7)
N30.0505 (10)0.0516 (10)0.0431 (9)0.0011 (8)0.0050 (8)0.0001 (7)
N40.0518 (10)0.0517 (10)0.0418 (9)0.0025 (8)0.0016 (7)0.0005 (7)
O10.0697 (10)0.0679 (10)0.0453 (8)0.0009 (8)0.0112 (7)0.0047 (7)
O20.0839 (12)0.0609 (10)0.0731 (11)0.0134 (9)0.0164 (9)0.0076 (8)
S10.0596 (4)0.0580 (4)0.0776 (4)0.0082 (3)0.0178 (3)0.0040 (3)
Geometric parameters (Å, º) top
C1—C61.375 (3)C9—H9A0.9700
C1—C21.377 (3)C9—H9B0.9700
C1—N11.396 (3)C10—N41.299 (3)
C2—C31.400 (3)C10—N21.368 (2)
C2—H20.9300C11—N31.334 (3)
C3—C41.390 (4)C11—N21.368 (2)
C3—C71.494 (4)C11—S11.676 (2)
C4—C51.390 (4)C12—N21.464 (3)
C4—H40.9300C12—C131.474 (4)
C5—C61.361 (3)C12—H12A0.9700
C5—H50.9300C12—H12B0.9700
C6—O11.391 (3)C13—C14A1.169 (7)
C7—H7A0.9600C13—C14B1.200 (13)
C7—H7B0.9600C14A—H14A0.9300
C7—H7C0.9600C14A—H14B0.9300
C8—O21.198 (3)C14B—H14C0.9300
C8—N11.368 (3)C14B—H14D0.9300
C8—O11.378 (3)N3—N41.373 (2)
C9—N11.450 (3)N3—H30.87 (3)
C9—C101.496 (3)
C6—C1—C2121.5 (2)N4—C10—N2111.65 (18)
C6—C1—N1105.88 (18)N4—C10—C9122.53 (18)
C2—C1—N1132.6 (2)N2—C10—C9125.80 (18)
C1—C2—C3117.5 (2)N3—C11—N2103.75 (18)
C1—C2—H2121.2N3—C11—S1128.44 (16)
C3—C2—H2121.2N2—C11—S1127.80 (16)
C4—C3—C2119.2 (2)N2—C12—C13110.8 (2)
C4—C3—C7120.7 (2)N2—C12—H12A109.5
C2—C3—C7120.1 (2)C13—C12—H12A109.5
C3—C4—C5123.1 (2)N2—C12—H12B109.5
C3—C4—H4118.5C13—C12—H12B109.5
C5—C4—H4118.5H12A—C12—H12B108.1
C6—C5—C4116.0 (2)C14A—C13—C14B69.5 (8)
C6—C5—H5122.0C14A—C13—C12134.8 (6)
C4—C5—H5122.0C14B—C13—C12133.9 (10)
C5—C6—C1122.7 (2)C13—C14A—H14A120.0
C5—C6—O1128.1 (2)C13—C14A—H14B120.0
C1—C6—O1109.20 (19)H14A—C14A—H14B120.0
C3—C7—H7A109.5C13—C14B—H14C120.0
C3—C7—H7B109.5C13—C14B—H14D120.0
H7A—C7—H7B109.5H14C—C14B—H14D120.0
C3—C7—H7C109.5C8—N1—C1109.74 (17)
H7A—C7—H7C109.5C8—N1—C9123.95 (18)
H7B—C7—H7C109.5C1—N1—C9126.18 (17)
O2—C8—N1129.0 (2)C11—N2—C10107.61 (16)
O2—C8—O1123.5 (2)C11—N2—C12124.25 (17)
N1—C8—O1107.55 (18)C10—N2—C12128.12 (17)
N1—C9—C10111.70 (17)C11—N3—N4113.48 (17)
N1—C9—H9A109.3C11—N3—H3126.7 (18)
C10—C9—H9A109.3N4—N3—H3119.6 (18)
N1—C9—H9B109.3C10—N4—N3103.51 (17)
C10—C9—H9B109.3C8—O1—C6107.59 (16)
H9A—C9—H9B107.9
C6—C1—C2—C30.1 (3)C6—C1—N1—C9177.32 (18)
N1—C1—C2—C3177.5 (2)C2—C1—N1—C90.6 (4)
C1—C2—C3—C41.0 (3)C10—C9—N1—C8110.1 (2)
C1—C2—C3—C7178.2 (2)C10—C9—N1—C174.4 (3)
C2—C3—C4—C51.0 (4)N3—C11—N2—C100.4 (2)
C7—C3—C4—C5178.3 (2)S1—C11—N2—C10179.11 (16)
C3—C4—C5—C60.0 (4)N3—C11—N2—C12178.78 (18)
C4—C5—C6—C10.9 (4)S1—C11—N2—C120.7 (3)
C4—C5—C6—O1177.8 (2)N4—C10—N2—C110.4 (2)
C2—C1—C6—C50.9 (3)C9—C10—N2—C11178.45 (18)
N1—C1—C6—C5179.1 (2)N4—C10—N2—C12178.69 (18)
C2—C1—C6—O1178.09 (19)C9—C10—N2—C123.2 (3)
N1—C1—C6—O10.1 (2)C13—C12—N2—C1184.5 (3)
N1—C9—C10—N490.2 (2)C13—C12—N2—C1093.5 (3)
N1—C9—C10—N287.7 (2)N2—C11—N3—N40.3 (2)
N2—C12—C13—C14A131.5 (6)S1—C11—N3—N4179.20 (15)
N2—C12—C13—C14B122.9 (12)N2—C10—N4—N30.2 (2)
O2—C8—N1—C1177.5 (2)C9—C10—N4—N3178.34 (17)
O1—C8—N1—C12.0 (2)C11—N3—N4—C100.1 (2)
O2—C8—N1—C91.4 (4)O2—C8—O1—C6177.7 (2)
O1—C8—N1—C9178.11 (18)N1—C8—O1—C61.9 (2)
C6—C1—N1—C81.3 (2)C5—C6—O1—C8177.8 (2)
C2—C1—N1—C8176.6 (2)C1—C6—O1—C81.1 (2)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N3—H3···S1i0.87 (3)2.41 (3)3.284 (2)179 (3)
C14A—H14B···S1ii0.932.743.506 (7)140
Symmetry codes: (i) x, y+1, z+1; (ii) x+1, y, z.

Experimental details

Crystal data
Chemical formulaC14H13N4O2S
Mr301.34
Crystal system, space groupOrthorhombic, Pbca
Temperature (K)293
a, b, c (Å)7.2848 (3), 19.9139 (7), 20.0634 (10)
V3)2910.6 (2)
Z8
Radiation typeMo Kα
µ (mm1)0.23
Crystal size (mm)0.66 × 0.43 × 0.11
Data collection
DiffractometerStoe IPDS II
Absorption correctionIntegration
(X-RED32; Stoe & Cie, 2002)
Tmin, Tmax0.881, 0.975
No. of measured, independent and
observed [I > 2σ(I)] reflections
32373, 2852, 2153
Rint0.078
(sin θ/λ)max1)0.617
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.042, 0.123, 1.00
No. of reflections2852
No. of parameters206
No. of restraints40
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.36, 0.19

Computer programs: X-AREA (Stoe & Cie, 2002), X-AREA, X-RED32 (Stoe & Cie, 2002), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEPIII (Burnett & Johnson, 1996), WinGX (Farrugia, 1999) and PARST (Nardelli, 1995).

Selected geometric parameters (Å, º) top
C8—O21.198 (3)N3—N41.373 (2)
C10—N41.299 (3)
N1—C9—C10111.70 (17)
N1—C9—C10—N490.2 (2)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N3—H3···S1i0.87 (3)2.41 (3)3.284 (2)179 (3)
C14A—H14B···S1ii0.932.743.506 (7)140.0
Symmetry codes: (i) x, y+1, z+1; (ii) x+1, y, z.
 

Subscribe to Acta Crystallographica Section E: Crystallographic Communications

The full text of this article is available to subscribers to the journal.

If you have already registered and are using a computer listed in your registration details, please email support@iucr.org for assistance.

Buy online

You may purchase this article in PDF and/or HTML formats. For purchasers in the European Community who do not have a VAT number, VAT will be added at the local rate. Payments to the IUCr are handled by WorldPay, who will accept payment by credit card in several currencies. To purchase the article, please complete the form below (fields marked * are required), and then click on `Continue'.
E-mail address* 
Repeat e-mail address* 
(for error checking) 

Format*   PDF (US $40)
   HTML (US $40)
   PDF+HTML (US $50)
In order for VAT to be shown for your country javascript needs to be enabled.

VAT number 
(non-UK EC countries only) 
Country* 
 

Terms and conditions of use
Contact us

Follow Acta Cryst. E
Sign up for e-alerts
Follow Acta Cryst. on Twitter
Follow us on facebook
Sign up for RSS feeds